Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131880 | XP_003591142.1 | 97.638 | 889 | 16 | 2 | 1 | 888 | 1 | 885 | 0.0 | 1800 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131880 | sp|Q948T9|RBOHB_SOLTU | 76.148 | 893 | 182 | 5 | 1 | 888 | 1 | 867 | 0.0 | 1435 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131880 | G7I8P3 | 97.638 | 889 | 16 | 2 | 1 | 888 | 1 | 885 | 0.0 | 1800 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0016640 | Msa1131880 | 0.812551 | 4.004491e-51 | -8.615850e-47 |
Msa0747230 | Msa1131880 | 0.957016 | 7.484266e-115 | -8.615850e-47 |
Msa0803640 | Msa1131880 | 0.820577 | 6.374445e-53 | -8.615850e-47 |
Msa0830400 | Msa1131880 | 0.803392 | 3.562495e-49 | -8.615850e-47 |
Msa0142340 | Msa1131880 | -0.801788 | 7.632515e-49 | -8.615850e-47 |
Msa0172740 | Msa1131880 | 0.979514 | 3.893048e-148 | -8.615850e-47 |
Msa0174100 | Msa1131880 | 0.828584 | 8.289322e-55 | -8.615850e-47 |
Msa0367540 | Msa1131880 | -0.801473 | 8.856198e-49 | -8.615850e-47 |
Msa0998620 | Msa1131880 | 0.822234 | 2.641618e-53 | -8.615850e-47 |
Msa1026970 | Msa1131880 | 0.851937 | 6.407473e-61 | -8.615850e-47 |
Msa1041720 | Msa1131880 | 0.809112 | 2.222892e-50 | -8.615850e-47 |
Msa1050970 | Msa1131880 | 0.814001 | 1.924033e-51 | -8.615850e-47 |
Msa1074210 | Msa1131880 | 0.831433 | 1.673782e-55 | -8.615850e-47 |
Msa1080610 | Msa1131880 | -0.802337 | 5.885212e-49 | -8.615850e-47 |
Msa1080680 | Msa1131880 | -0.800549 | 1.368308e-48 | -8.615850e-47 |
Msa1111900 | Msa1131880 | 0.851857 | 6.753999e-61 | -8.615850e-47 |
Msa1114680 | Msa1131880 | 0.810085 | 1.373309e-50 | -8.615850e-47 |
Msa1131880 | Msa1133690 | 0.853663 | 2.059076e-61 | -8.615850e-47 |
Msa1131880 | Msa1133760 | 0.847821 | 9.070745e-60 | -8.615850e-47 |
Msa1131880 | Msa1154310 | 0.858065 | 1.064075e-62 | -8.615850e-47 |
Msa1131880 | Msa1159160 | 0.830340 | 3.103258e-55 | -8.615850e-47 |
Msa1131880 | Msa1167150 | -0.804226 | 2.391081e-49 | -8.615850e-47 |
Msa1131880 | Msa1207790 | 0.815253 | 1.016365e-51 | -8.615850e-47 |
Msa1131880 | Msa1339020 | 0.802426 | 5.640823e-49 | -8.615850e-47 |
Msa1131880 | Msa1381790 | 0.815725 | 7.978814e-52 | -8.615850e-47 |
Msa1131880 | Msa1440270 | 0.988172 | 5.483918e-173 | -8.615850e-47 |
Msa1131880 | Msa1461690 | 0.802153 | 6.421080e-49 | -8.615850e-47 |
Msa0500700 | Msa1131880 | -0.813143 | 2.970937e-51 | -8.615850e-47 |
Msa0548420 | Msa1131880 | 0.808077 | 3.696532e-50 | -8.615850e-47 |
Msa0578410 | Msa1131880 | 0.802263 | 6.096231e-49 | -8.615850e-47 |
Msa0875070 | Msa1131880 | 0.805175 | 1.515703e-49 | -8.615850e-47 |
Msa0898770 | Msa1131880 | 0.829278 | 5.628425e-55 | -8.615850e-47 |
Msa0928110 | Msa1131880 | 0.838714 | 2.440234e-57 | -8.615850e-47 |
Msa0940130 | Msa1131880 | 0.814214 | 1.726781e-51 | -8.615850e-47 |
Msa0940320 | Msa1131880 | 0.811199 | 7.890423e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131880 | MtrunA17_Chr1g0192121 | 97.638 | 889 | 16 | 2 | 1 | 888 | 1 | 885 | 0.0 | 1800 |
Msa1131880 | MtrunA17_Chr7g0272591 | 83.203 | 893 | 141 | 6 | 2 | 888 | 6 | 895 | 0.0 | 1537 |
Msa1131880 | MtrunA17_Chr3g0131401 | 60.222 | 900 | 317 | 12 | 26 | 888 | 28 | 923 | 0.0 | 1125 |
Msa1131880 | MtrunA17_Chr8g0385411 | 61.833 | 862 | 304 | 8 | 49 | 888 | 40 | 898 | 0.0 | 1118 |
Msa1131880 | MtrunA17_Chr8g0387591 | 60.638 | 846 | 286 | 10 | 60 | 888 | 129 | 944 | 0.0 | 1029 |
Msa1131880 | MtrunA17_Chr3g0131381 | 54.715 | 912 | 357 | 14 | 29 | 888 | 10 | 917 | 0.0 | 974 |
Msa1131880 | MtrunA17_Chr3g0131361 | 53.215 | 902 | 376 | 16 | 21 | 888 | 21 | 910 | 0.0 | 944 |
Msa1131880 | MtrunA17_Chr2g0301511 | 52.247 | 890 | 359 | 13 | 55 | 888 | 52 | 931 | 0.0 | 901 |
Msa1131880 | MtrunA17_Chr7g0238371 | 53.904 | 794 | 335 | 11 | 116 | 888 | 68 | 851 | 0.0 | 874 |
Msa1131880 | MtrunA17_Chr4g0061441 | 48.289 | 789 | 356 | 13 | 115 | 888 | 79 | 830 | 0.0 | 750 |
Msa1131880 | MtrunA17_Chr2g0291481 | 28.099 | 242 | 146 | 7 | 514 | 752 | 293 | 509 | 7.70e-22 | 101 |
Msa1131880 | MtrunA17_Chr4g0058571 | 25.610 | 246 | 140 | 6 | 479 | 721 | 257 | 462 | 2.01e-18 | 90.5 |
Msa1131880 | MtrunA17_Chr1g0202731 | 25.764 | 229 | 133 | 6 | 503 | 729 | 263 | 456 | 2.04e-18 | 90.5 |
Msa1131880 | MtrunA17_Chr1g0202741 | 24.891 | 229 | 135 | 6 | 503 | 729 | 258 | 451 | 1.22e-16 | 84.7 |
Msa1131880 | MtrunA17_Chr8g0348531 | 25.225 | 222 | 110 | 6 | 514 | 722 | 281 | 459 | 1.98e-15 | 80.9 |
Msa1131880 | MtrunA17_Chr8g0349071 | 25.943 | 212 | 121 | 6 | 514 | 722 | 37 | 215 | 7.97e-14 | 73.2 |
Msa1131880 | MtrunA17_Chr8g0348521 | 26.415 | 212 | 120 | 6 | 514 | 722 | 268 | 446 | 1.69e-13 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131880 | AT1G09090.2 | 68.042 | 848 | 238 | 9 | 47 | 888 | 23 | 843 | 0.0 | 1199 |
Msa1131880 | AT5G47910.1 | 63.757 | 905 | 284 | 16 | 17 | 888 | 28 | 921 | 0.0 | 1168 |
Msa1131880 | AT5G51060.1 | 62.262 | 893 | 308 | 11 | 22 | 888 | 16 | 905 | 0.0 | 1148 |
Msa1131880 | AT5G07390.1 | 58.676 | 876 | 319 | 10 | 47 | 888 | 36 | 902 | 0.0 | 1042 |
Msa1131880 | AT4G25090.1 | 60.870 | 782 | 285 | 8 | 116 | 888 | 80 | 849 | 0.0 | 1019 |
Msa1131880 | AT4G25090.2 | 60.385 | 780 | 280 | 9 | 116 | 888 | 80 | 837 | 0.0 | 1003 |
Msa1131880 | AT1G64060.1 | 55.459 | 916 | 325 | 13 | 49 | 888 | 36 | 944 | 0.0 | 992 |
Msa1131880 | AT5G07390.2 | 54.930 | 852 | 291 | 13 | 47 | 855 | 36 | 837 | 0.0 | 916 |
Msa1131880 | AT1G19230.2 | 49.725 | 909 | 366 | 12 | 55 | 888 | 60 | 952 | 0.0 | 870 |
Msa1131880 | AT1G09090.1 | 67.590 | 614 | 174 | 7 | 47 | 654 | 23 | 617 | 0.0 | 863 |
Msa1131880 | AT4G11230.1 | 56.070 | 799 | 307 | 13 | 118 | 888 | 159 | 941 | 0.0 | 859 |
Msa1131880 | AT1G19230.1 | 49.613 | 905 | 347 | 12 | 55 | 888 | 60 | 926 | 0.0 | 857 |
Msa1131880 | AT5G60010.1 | 50.814 | 799 | 359 | 12 | 116 | 888 | 96 | 886 | 0.0 | 825 |
Msa1131880 | AT3G45810.1 | 48.837 | 817 | 364 | 13 | 116 | 888 | 106 | 912 | 0.0 | 781 |
Msa1131880 | AT5G49740.1 | 28.692 | 237 | 145 | 6 | 514 | 747 | 291 | 506 | 1.40e-23 | 107 |
Msa1131880 | AT5G49740.2 | 28.692 | 237 | 145 | 6 | 514 | 747 | 291 | 506 | 1.44e-23 | 106 |
Msa1131880 | AT5G49740.3 | 28.692 | 237 | 145 | 6 | 514 | 747 | 291 | 506 | 2.29e-23 | 106 |
Msa1131880 | AT5G49730.1 | 28.270 | 237 | 146 | 6 | 514 | 747 | 282 | 497 | 6.69e-23 | 105 |
Msa1131880 | AT5G49730.2 | 28.270 | 237 | 146 | 6 | 514 | 747 | 282 | 497 | 7.25e-23 | 104 |
Msa1131880 | AT5G50160.2 | 27.236 | 246 | 135 | 6 | 479 | 721 | 61 | 265 | 5.72e-22 | 101 |
Msa1131880 | AT5G50160.1 | 27.236 | 246 | 135 | 6 | 479 | 721 | 240 | 444 | 3.49e-21 | 99.8 |
Msa1131880 | AT5G23990.1 | 27.344 | 256 | 135 | 8 | 480 | 732 | 196 | 403 | 2.08e-19 | 94.0 |
Msa1131880 | AT5G23990.3 | 26.562 | 256 | 137 | 7 | 480 | 732 | 106 | 313 | 3.02e-19 | 93.2 |
Msa1131880 | AT1G01580.2 | 21.516 | 409 | 225 | 13 | 342 | 728 | 214 | 548 | 5.95e-19 | 92.8 |
Msa1131880 | AT5G23980.1 | 25.483 | 259 | 143 | 6 | 479 | 734 | 236 | 447 | 7.95e-19 | 92.0 |
Msa1131880 | AT5G23990.2 | 26.562 | 256 | 137 | 7 | 480 | 732 | 238 | 445 | 8.44e-19 | 92.0 |
Msa1131880 | AT1G01580.1 | 21.516 | 409 | 225 | 13 | 342 | 728 | 136 | 470 | 1.00e-18 | 92.0 |
Msa1131880 | AT1G23020.2 | 27.358 | 212 | 118 | 6 | 514 | 722 | 300 | 478 | 7.59e-18 | 89.0 |
Msa1131880 | AT1G23020.1 | 27.358 | 212 | 118 | 6 | 514 | 722 | 299 | 477 | 7.64e-18 | 89.0 |
Msa1131880 | AT1G23020.5 | 27.358 | 212 | 118 | 6 | 514 | 722 | 299 | 477 | 7.64e-18 | 89.0 |
Msa1131880 | AT1G23020.6 | 27.358 | 212 | 118 | 6 | 514 | 722 | 277 | 455 | 1.02e-17 | 88.6 |
Msa1131880 | AT1G23020.4 | 27.358 | 212 | 118 | 6 | 514 | 722 | 276 | 454 | 1.12e-17 | 88.6 |
Msa1131880 | AT1G23020.3 | 27.358 | 212 | 118 | 6 | 514 | 722 | 276 | 454 | 1.12e-17 | 88.6 |
Msa1131880 | AT1G23020.7 | 27.358 | 212 | 118 | 6 | 514 | 722 | 273 | 451 | 1.32e-17 | 88.2 |
Msa1131880 | AT1G01590.1 | 27.039 | 233 | 110 | 8 | 505 | 722 | 270 | 457 | 4.75e-17 | 86.7 |
Find 235 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGAAGAGTTGCGAGAATTT+TGG | 0.178663 | 7_3:+84544858 | Msa1131880:CDS |
CAAAGCTTTGATCTGTAATT+TGG | 0.206644 | 7_3:-84544883 | None:intergenic |
AGGACAATTGGAAACGTATT+TGG | 0.219648 | 7_3:+84547155 | Msa1131880:CDS |
AACAAGACTTGATGAGAAAT+TGG | 0.224217 | 7_3:-84542968 | None:intergenic |
TACTTCGTATATAATATAAT+TGG | 0.229273 | 7_3:+84543029 | Msa1131880:five_prime_UTR |
AATTATTGGTGGTTCGTTAA+AGG | 0.240496 | 7_3:+84548209 | Msa1131880:CDS |
ACTATTTAGGTGATAGCTTT+TGG | 0.241901 | 7_3:+84548062 | Msa1131880:intron |
CCAAGCGAGCCTATTTCTAT+TGG | 0.264084 | 7_3:+84549632 | Msa1131880:CDS |
GTGAGTTTCTTGAGGGGTTT+TGG | 0.265957 | 7_3:-84548326 | None:intergenic |
CGGTTTCCGTTCAGAATATT+CGG | 0.267262 | 7_3:+84543402 | Msa1131880:CDS |
TCTCTAAAAGCCCGTTTAAT+AGG | 0.271417 | 7_3:-84547115 | None:intergenic |
GGTTCGTTTGAATGGTTTAA+AGG | 0.272767 | 7_3:+84549670 | Msa1131880:CDS |
GAAAAGTAAAACAAATAATT+AGG | 0.277845 | 7_3:+84543179 | Msa1131880:five_prime_UTR |
CGAACTAAGAAGGCTTTCTT+TGG | 0.282783 | 7_3:+84550066 | Msa1131880:CDS |
TTATAAACATTACGCCAATT+TGG | 0.292843 | 7_3:-84549877 | None:intergenic |
CTTGTTGTAAACATTTATTT+TGG | 0.298293 | 7_3:+84542985 | Msa1131880:five_prime_UTR |
TCAATATATCCAAGGTTGTT+TGG | 0.300863 | 7_3:-84546798 | None:intergenic |
TGTGGTCATGGTTGTGCTTA+TGG | 0.307236 | 7_3:+84548250 | Msa1131880:CDS |
CTAACTTCTGGCTTAACATT+TGG | 0.313513 | 7_3:-84547072 | None:intergenic |
TCGCAACTCTTCCTTTGTTA+TGG | 0.316921 | 7_3:-84544849 | None:intergenic |
CAGATCAAAGCTTTGATTCA+AGG | 0.323044 | 7_3:+84544891 | Msa1131880:CDS |
CCACTTTGGTCATCATTTGC+TGG | 0.324385 | 7_3:-84549191 | None:intergenic |
GAGAGTAGATAGGATTGTTA+TGG | 0.325622 | 7_3:-84542946 | None:intergenic |
AACCTTGGTTTCGTCGTAAT+AGG | 0.334498 | 7_3:+84548294 | Msa1131880:CDS |
CTAAGAATTGATGGACCTTA+TGG | 0.339430 | 7_3:+84549424 | Msa1131880:CDS |
ATGAAAGACCTGATAATTAT+TGG | 0.340393 | 7_3:+84548195 | Msa1131880:CDS |
CTTTAGTAGGGACTAACTTC+TGG | 0.342443 | 7_3:-84547084 | None:intergenic |
ACATTCGAACTTTGGGTGAT+TGG | 0.346284 | 7_3:+84549002 | Msa1131880:CDS |
GTATTTGGATCATAGCTCTA+TGG | 0.352268 | 7_3:+84547170 | Msa1131880:CDS |
GCGAGTAACCCAATAGAAAT+AGG | 0.356360 | 7_3:-84549641 | None:intergenic |
GGTTTCCGTTCAGAATATTC+GGG | 0.356724 | 7_3:+84543403 | Msa1131880:CDS |
CTTATTGGCCGAAGCACTTA+AGG | 0.358195 | 7_3:-84546715 | None:intergenic |
ACGAACCACCAATAATTATC+AGG | 0.358413 | 7_3:-84548203 | None:intergenic |
GAACATATACAATGACAAAA+AGG | 0.358628 | 7_3:-84548379 | None:intergenic |
CAAGCGAGCCTATTTCTATT+GGG | 0.361277 | 7_3:+84549633 | Msa1131880:CDS |
AGACACCGAAACGGCGCTTC+TGG | 0.363185 | 7_3:+84543430 | Msa1131880:CDS |
CAATATATCCAAGGTTGTTT+GGG | 0.365860 | 7_3:-84546797 | None:intergenic |
ATAGGATTGTGCTCTTTAGT+AGG | 0.366120 | 7_3:-84547097 | None:intergenic |
TCCTTTACCTTAGCAAGAAA+TGG | 0.371765 | 7_3:+84548423 | Msa1131880:CDS |
AAGCGTTCACATTCGAACTT+TGG | 0.372800 | 7_3:+84548994 | Msa1131880:CDS |
TGCAATGCCAGTACATTTCC+CGG | 0.373710 | 7_3:-84548761 | None:intergenic |
GAAGCGTCCGTCGTCGCTTT+CGG | 0.373980 | 7_3:+84543466 | Msa1131880:CDS |
TCGCATCCGTATAGTATCAT+TGG | 0.375602 | 7_3:-84548588 | None:intergenic |
CTTCGGCTTTCTGTGCTCTC+TGG | 0.375928 | 7_3:-84543242 | None:intergenic |
ATAATAATATAGATGTATTA+CGG | 0.381189 | 7_3:-84550169 | None:intergenic |
GCTTCAGCGGGCCGCTAAGC+GGG | 0.384442 | 7_3:+84543276 | Msa1131880:CDS |
AAGAGCACAATCCTATTAAA+CGG | 0.386167 | 7_3:+84547104 | Msa1131880:CDS |
GTTCGTTTGAATGGTTTAAA+GGG | 0.386292 | 7_3:+84549671 | Msa1131880:CDS |
CTCTTTATGAAAATCAAACT+TGG | 0.388509 | 7_3:-84550110 | None:intergenic |
CACCATACAATTTCTATCAT+AGG | 0.391605 | 7_3:+84543072 | Msa1131880:five_prime_UTR |
CTTAGAAGAAGGAGGGGAGG+TGG | 0.393904 | 7_3:+84549570 | Msa1131880:CDS |
ATATAGCTAGCTCCATTTGA+TGG | 0.394907 | 7_3:+84550235 | Msa1131880:three_prime_UTR |
TACAGAAGAAGAAGTAAAAG+AGG | 0.396567 | 7_3:+84546517 | Msa1131880:CDS |
AATGCTGTATAATAGAAATT+AGG | 0.401049 | 7_3:+84550314 | Msa1131880:three_prime_UTR |
ACTAGTAAGAGAGTAGTAAT+TGG | 0.404495 | 7_3:+84543144 | Msa1131880:five_prime_UTR |
TGAGAAATTGGAGAGTAGAT+AGG | 0.404958 | 7_3:-84542956 | None:intergenic |
AGCGTTCACATTCGAACTTT+GGG | 0.412327 | 7_3:+84548995 | Msa1131880:CDS |
AGAGTAGATAGGATTGTTAT+GGG | 0.415771 | 7_3:-84542945 | None:intergenic |
GATTATTGCCTTAAGTGCTT+CGG | 0.419075 | 7_3:+84546707 | Msa1131880:intron |
GCTTGCCAGAAGCGCCGTTT+CGG | 0.419540 | 7_3:-84543435 | None:intergenic |
TCTGTGGCGTGTAATAATCT+TGG | 0.420991 | 7_3:-84548137 | None:intergenic |
GCGAGCAGGGTTCGTTTGAA+TGG | 0.421609 | 7_3:+84549662 | Msa1131880:CDS |
CACTGGCTAAATCGAGTCTT+GGG | 0.426185 | 7_3:-84543680 | None:intergenic |
CTATTGGGTTACTCGCGAGC+AGG | 0.429028 | 7_3:+84549648 | Msa1131880:CDS |
CTCACATAACTACAGATAGT+AGG | 0.430099 | 7_3:+84547041 | Msa1131880:CDS |
AAACGGCACGACGTTTGTAC+TGG | 0.430573 | 7_3:-84547231 | None:intergenic |
CTATTGTGTCACCACGGCTA+AGG | 0.433727 | 7_3:+84547267 | Msa1131880:CDS |
AACGAGTCAAAGGAGTTTGC+TGG | 0.435309 | 7_3:+84544779 | Msa1131880:CDS |
CTTAGTTCGCCAACCAATCC+AGG | 0.435611 | 7_3:-84550052 | None:intergenic |
TAATAATATAGATGTATTAC+GGG | 0.435694 | 7_3:-84550168 | None:intergenic |
AGGAGCTGATGTAATAGAAA+AGG | 0.435812 | 7_3:-84548957 | None:intergenic |
TCTTGTGCTGGTGCTCCATA+AGG | 0.436359 | 7_3:-84549439 | None:intergenic |
ATGCCAAGGCTAAGAATTGA+TGG | 0.442152 | 7_3:+84549415 | Msa1131880:CDS |
TGAGGTAGCGGAGAATGATA+AGG | 0.445771 | 7_3:+84549702 | Msa1131880:CDS |
TTAGGCACATACCATTCAAA+TGG | 0.446242 | 7_3:-84548854 | None:intergenic |
AGGCCTTTGATAAGGTTGAT+AGG | 0.447285 | 7_3:+84543537 | Msa1131880:CDS |
GGTCCAGCTCCTCCATGATA+AGG | 0.448687 | 7_3:-84546776 | None:intergenic |
GCACACAGATTCTACGTACT+TGG | 0.449033 | 7_3:+84543119 | Msa1131880:five_prime_UTR |
AGCTCACGGGTGGGCTTCAG+CGG | 0.449072 | 7_3:+84543263 | Msa1131880:CDS |
GATGCTAAAGGCCCGCTTAG+CGG | 0.450959 | 7_3:-84543287 | None:intergenic |
TAGGCACATACCATTCAAAT+GGG | 0.451319 | 7_3:-84548853 | None:intergenic |
TTTGGAATTGCAATTGGGGT+TGG | 0.452710 | 7_3:+84548080 | Msa1131880:CDS |
CTGTGGCGTGTAATAATCTT+GGG | 0.458512 | 7_3:-84548136 | None:intergenic |
ACCATTTCTTGCTAAGGTAA+AGG | 0.460848 | 7_3:-84548424 | None:intergenic |
TCTTATACCATTTCTTGCTA+AGG | 0.464360 | 7_3:-84548430 | None:intergenic |
CAGATATCTCCCCATTTGAA+TGG | 0.464534 | 7_3:+84548843 | Msa1131880:CDS |
CTTCAAGGATGACGGTGAAA+TGG | 0.466601 | 7_3:+84543349 | Msa1131880:CDS |
GCGGTTCCAATGATACTATA+CGG | 0.467047 | 7_3:+84548582 | Msa1131880:CDS |
TAGGCTCGCTTGGTTGCAAA+AGG | 0.468284 | 7_3:-84549622 | None:intergenic |
CTACTGCGTGCATTTAGATC+TGG | 0.469790 | 7_3:+84548615 | Msa1131880:CDS |
TAAACTAAGACAGGTGTCTC+AGG | 0.471090 | 7_3:+84543490 | Msa1131880:CDS |
GGGTTGGACCGGTGTGGTCA+TGG | 0.471179 | 7_3:+84548238 | Msa1131880:CDS |
GGCTTCAGCGGGCCGCTAAG+CGG | 0.473400 | 7_3:+84543275 | Msa1131880:CDS |
TGAAGCCCACCCGTGAGCTT+CGG | 0.474667 | 7_3:-84543259 | None:intergenic |
TAGGATTGTGCTCTTTAGTA+GGG | 0.477941 | 7_3:-84547096 | None:intergenic |
CCAATAGAAATAGGCTCGCT+TGG | 0.478144 | 7_3:-84549632 | None:intergenic |
CTTGGTAGGCTTGATTTGCC+TGG | 0.478179 | 7_3:-84549236 | None:intergenic |
TGCCCTTATCATGGAGGAGC+TGG | 0.478324 | 7_3:+84546773 | Msa1131880:CDS |
GGTCCATCAATTCTTAGCCT+TGG | 0.479139 | 7_3:-84549418 | None:intergenic |
AAACAACCTTGGATATATTG+AGG | 0.479313 | 7_3:+84546800 | Msa1131880:CDS |
TACGAAGTTCTTCTTCTAGT+AGG | 0.479588 | 7_3:+84549472 | Msa1131880:CDS |
GATTGGTTGGCGAACTAAGA+AGG | 0.482446 | 7_3:+84550056 | Msa1131880:CDS |
CTAAGAGCTGATATGCTACC+AGG | 0.483278 | 7_3:+84549218 | Msa1131880:CDS |
AGAGCACAATCCTATTAAAC+GGG | 0.483797 | 7_3:+84547105 | Msa1131880:CDS |
GAACAAAAGTGGAAGCTTCA+AGG | 0.484269 | 7_3:+84543334 | Msa1131880:CDS |
TGCCTATGATAGAAATTGTA+TGG | 0.487564 | 7_3:-84543074 | None:intergenic |
AATCCAGGTTGCAGTGTACC+CGG | 0.489896 | 7_3:+84548742 | Msa1131880:intron |
AAGTTGATATTGTCATCAAA+TGG | 0.490240 | 7_3:-84547394 | None:intergenic |
AAGAGAGTAGTAATTGGCTT+GGG | 0.493053 | 7_3:+84543150 | Msa1131880:five_prime_UTR |
GTCCAGCTCCTCCATGATAA+GGG | 0.494723 | 7_3:-84546775 | None:intergenic |
GCACTGGCTAAATCGAGTCT+TGG | 0.494740 | 7_3:-84543681 | None:intergenic |
AGGTTTAACTATACCTTGGT+AGG | 0.495179 | 7_3:-84549250 | None:intergenic |
AAAACCAGTGAGTTTCTTGA+GGG | 0.498737 | 7_3:-84548333 | None:intergenic |
GGAATATGCTGCCCTTATCA+TGG | 0.499572 | 7_3:+84546764 | Msa1131880:CDS |
TAAGAGAGTAGTAATTGGCT+TGG | 0.501598 | 7_3:+84543149 | Msa1131880:five_prime_UTR |
AACCGAAGCAAGAACAAAAG+TGG | 0.503450 | 7_3:+84543323 | Msa1131880:CDS |
TTACTGTGGAGCGCCTGGAT+TGG | 0.503829 | 7_3:+84550039 | Msa1131880:CDS |
GGTGCTGCCCGTGCTCTACA+AGG | 0.506472 | 7_3:+84543569 | Msa1131880:CDS |
TTACAACTCCATCCATCAAA+TGG | 0.506903 | 7_3:-84550247 | None:intergenic |
GTGATGGTGTTTCTACATAC+AGG | 0.507741 | 7_3:-84547334 | None:intergenic |
CAAGAAATGGTATAAGAAAA+CGG | 0.507908 | 7_3:+84548436 | Msa1131880:CDS |
TGGAACCACCATTCCAAGCC+TGG | 0.508118 | 7_3:-84547374 | None:intergenic |
TTGTAGAGCACGGGCAGCAC+CGG | 0.508836 | 7_3:-84543567 | None:intergenic |
CTTAGGAGTAGGACCAGGCT+TGG | 0.508877 | 7_3:+84547361 | Msa1131880:CDS |
GTTCTTCTTCTAGTAGGACT+AGG | 0.509693 | 7_3:+84549478 | Msa1131880:CDS |
AGAAGACTTAGAAGAAGGAG+GGG | 0.511195 | 7_3:+84549564 | Msa1131880:CDS |
AGTGTACCCGGGAAATGTAC+TGG | 0.514825 | 7_3:+84548754 | Msa1131880:CDS |
GTTGGACGTCCGTGATGACT+CGG | 0.515876 | 7_3:+84543382 | Msa1131880:CDS |
TATTGTGTCACCACGGCTAA+GGG | 0.516732 | 7_3:+84547268 | Msa1131880:CDS |
CACAGAAAGCCGAAGCTCAC+GGG | 0.516919 | 7_3:+84543250 | Msa1131880:CDS |
TATACCTCGACGACGTGCTA+AGG | 0.520297 | 7_3:-84544816 | None:intergenic |
CAAGAAGAAGACTTAGAAGA+AGG | 0.523128 | 7_3:+84549559 | Msa1131880:CDS |
GAAACACCATCACTTGGCTT+AGG | 0.524639 | 7_3:+84547344 | Msa1131880:CDS |
AGACTTAGAAGAAGGAGGGG+AGG | 0.525285 | 7_3:+84549567 | Msa1131880:CDS |
GACCACACCGGTCCAACCCT+CGG | 0.525744 | 7_3:-84548234 | None:intergenic |
GGAGCTGATGTAATAGAAAA+GGG | 0.527463 | 7_3:-84548956 | None:intergenic |
AAATAAAATGTAGGATGCCA+AGG | 0.528211 | 7_3:+84549401 | Msa1131880:intron |
GCTCACGGGTGGGCTTCAGC+GGG | 0.534753 | 7_3:+84543264 | Msa1131880:CDS |
GTAAAACAAATAATTAGGAA+TGG | 0.535067 | 7_3:+84543184 | Msa1131880:exon |
TGCACAAGTGTGTATGAAGA+AGG | 0.535781 | 7_3:+84549751 | Msa1131880:CDS |
TGACCTATCAACCTTATCAA+AGG | 0.537291 | 7_3:-84543540 | None:intergenic |
GCACAGAAAGCCGAAGCTCA+CGG | 0.538948 | 7_3:+84543249 | Msa1131880:CDS |
AGGGGTGATGAATGAGGTAG+CGG | 0.541100 | 7_3:+84549690 | Msa1131880:CDS |
TGATTGGACGTCACAACTGA+AGG | 0.541866 | 7_3:+84549018 | Msa1131880:CDS |
GTTATGTGAGCTGATTGTGC+TGG | 0.544038 | 7_3:-84547028 | None:intergenic |
AGCTAGCTCCATTTGATGGA+TGG | 0.545007 | 7_3:+84550239 | Msa1131880:three_prime_UTR |
AAGGTTGATAGGTCAAAATC+CGG | 0.546352 | 7_3:+84543548 | Msa1131880:CDS |
CATGTTAAACTTGAGCGTCT+CGG | 0.548837 | 7_3:-84547296 | None:intergenic |
TTATGTGTAGCTGTACAACT+TGG | 0.549622 | 7_3:+84546985 | Msa1131880:intron |
TCGTTAAAGGAACCGAGGGT+TGG | 0.549825 | 7_3:+84548222 | Msa1131880:CDS |
TATTGGGTTACTCGCGAGCA+GGG | 0.550595 | 7_3:+84549649 | Msa1131880:CDS |
ATAGCCCATGACATGGAAAA+CGG | 0.551117 | 7_3:-84547248 | None:intergenic |
ACATACAGGCAACAAGATCA+AGG | 0.554086 | 7_3:-84547320 | None:intergenic |
TACAAACCTCAATATATCCA+AGG | 0.555649 | 7_3:-84546806 | None:intergenic |
TTCGTTTGAATGGTTTAAAG+GGG | 0.557889 | 7_3:+84549672 | Msa1131880:CDS |
TCACATAACTACAGATAGTA+GGG | 0.557927 | 7_3:+84547042 | Msa1131880:CDS |
TGTGGAGCGCCTGGATTGGT+TGG | 0.557961 | 7_3:+84550043 | Msa1131880:CDS |
AAAGGAACCGAGGGTTGGAC+CGG | 0.558348 | 7_3:+84548227 | Msa1131880:CDS |
TAAAACCAGTGAGTTTCTTG+AGG | 0.558629 | 7_3:-84548334 | None:intergenic |
CAGCTCTTAGAAGACCACTT+TGG | 0.560760 | 7_3:-84549205 | None:intergenic |
CCATCACTTGGCTTAGGAGT+AGG | 0.564213 | 7_3:+84547350 | Msa1131880:CDS |
TAGGACCAGGCTTGGAATGG+TGG | 0.564316 | 7_3:+84547369 | Msa1131880:CDS |
AGGGTGGACAAGAATGCTGA+TGG | 0.564553 | 7_3:+84546488 | Msa1131880:intron |
AAGAAGACTTAGAAGAAGGA+GGG | 0.564813 | 7_3:+84549563 | Msa1131880:CDS |
ATTAGGAATGAACGAGTCAA+AGG | 0.565200 | 7_3:+84544769 | Msa1131880:intron |
AAAGACCTGATAATTATTGG+TGG | 0.565609 | 7_3:+84548198 | Msa1131880:CDS |
CTTCTAGTAGGACTAGGAAT+CGG | 0.567489 | 7_3:+84549484 | Msa1131880:CDS |
GAGCTGGACCCAAACAACCT+TGG | 0.567715 | 7_3:+84546789 | Msa1131880:CDS |
TGGATGTAGTTTCAGAGACA+AGG | 0.568052 | 7_3:+84549833 | Msa1131880:CDS |
ACATGGACATACCTATGCAC+TGG | 0.571320 | 7_3:-84543697 | None:intergenic |
TATTATATACGAAGTATATG+TGG | 0.571701 | 7_3:-84543022 | None:intergenic |
AGAAAGCCGAAGCTCACGGG+TGG | 0.572651 | 7_3:+84543253 | Msa1131880:CDS |
AAACCCCTCAAGAAACTCAC+TGG | 0.573744 | 7_3:+84548329 | Msa1131880:CDS |
CAAATCTGTGAGGATACTAA+AGG | 0.573820 | 7_3:+84548641 | Msa1131880:CDS |
GCTTTCGGCTAAACTAAGAC+AGG | 0.576796 | 7_3:+84543481 | Msa1131880:CDS |
GTTTAAAGGGGTGATGAATG+AGG | 0.577520 | 7_3:+84549684 | Msa1131880:CDS |
GTAGCGGAGAATGATAAGGA+AGG | 0.577707 | 7_3:+84549706 | Msa1131880:CDS |
CTCGGCACCGCCCTTAGCCG+TGG | 0.582467 | 7_3:-84547278 | None:intergenic |
GAGTAGGACCAGGCTTGGAA+TGG | 0.584321 | 7_3:+84547366 | Msa1131880:CDS |
AAACGGCGCTTCTGGCAAGC+CGG | 0.585612 | 7_3:+84543438 | Msa1131880:CDS |
GAAGAAGACTTAGAAGAAGG+AGG | 0.587618 | 7_3:+84549562 | Msa1131880:CDS |
TTTGATGAGTTGGCTGTGGA+GGG | 0.587990 | 7_3:+84543650 | Msa1131880:CDS |
CTTGGCTTAGGAGTAGGACC+AGG | 0.588624 | 7_3:+84547356 | Msa1131880:CDS |
ACGCTTATATAGTCATCTCC+AGG | 0.593990 | 7_3:-84548977 | None:intergenic |
CTTAAGACCTTGTAGAGCAC+GGG | 0.594502 | 7_3:-84543576 | None:intergenic |
GTCTCAGGAGCTGAAGCGCA+TGG | 0.595956 | 7_3:+84543505 | Msa1131880:CDS |
ACGACGGACGCTTCTCAAGC+CGG | 0.596085 | 7_3:-84543457 | None:intergenic |
GGGTTCATATTCTTCATCTG+TGG | 0.596212 | 7_3:-84548153 | None:intergenic |
GAACGGAAACCGAGTCATCA+CGG | 0.600432 | 7_3:-84543391 | None:intergenic |
TGTATGAAGAAGGCGACGCT+CGG | 0.602286 | 7_3:+84549761 | Msa1131880:CDS |
AGTTTAGCCGAAAGCGACGA+CGG | 0.602465 | 7_3:-84543473 | None:intergenic |
TCGGGGTGGAGACACCGAAA+CGG | 0.606902 | 7_3:+84543421 | Msa1131880:CDS |
AGTGGAAGCTTCAAGGATGA+CGG | 0.607876 | 7_3:+84543341 | Msa1131880:CDS |
CAAGGATGACGGTGAAATGG+TGG | 0.608567 | 7_3:+84543352 | Msa1131880:CDS |
CGAGACGCTCAAGTTTAACA+TGG | 0.609198 | 7_3:+84547297 | Msa1131880:CDS |
ATCCAGGTTGCAGTGTACCC+GGG | 0.609923 | 7_3:+84548743 | Msa1131880:intron |
TGGTTCGTTAAAGGAACCGA+GGG | 0.611360 | 7_3:+84548218 | Msa1131880:CDS |
AGTAGCTGCTTCCATAACAA+AGG | 0.612070 | 7_3:+84544838 | Msa1131880:CDS |
CAAGGGTTTAAGTACACTAG+TGG | 0.613267 | 7_3:+84548797 | Msa1131880:CDS |
AAGAGAGCAAACATGAGTCA+TGG | 0.614927 | 7_3:+84543213 | Msa1131880:CDS |
ACTTAAGACCTTGTAGAGCA+CGG | 0.616788 | 7_3:-84543577 | None:intergenic |
GTTTCCGTTCAGAATATTCG+GGG | 0.618715 | 7_3:+84543404 | Msa1131880:CDS |
AAAACGTTGGAAGTGAAGGT+TGG | 0.620114 | 7_3:+84543609 | Msa1131880:CDS |
TCTTTGAGTATGCTAATCAA+AGG | 0.621357 | 7_3:-84549514 | None:intergenic |
TATGTAGAAACACCATCACT+TGG | 0.622762 | 7_3:+84547338 | Msa1131880:CDS |
TGACACAATAGCCCATGACA+TGG | 0.625098 | 7_3:-84547255 | None:intergenic |
ACTCGATTTAGCCAGTGCAT+AGG | 0.626507 | 7_3:+84543686 | Msa1131880:CDS |
CTAGTGTACTTAAACCCTTG+TGG | 0.628502 | 7_3:-84548794 | None:intergenic |
GAGCAAACATGAGTCATGGT+CGG | 0.629365 | 7_3:+84543217 | Msa1131880:CDS |
GCAATGCCAGTACATTTCCC+GGG | 0.633573 | 7_3:-84548760 | None:intergenic |
GATTGGACGTCACAACTGAA+GGG | 0.637531 | 7_3:+84549019 | Msa1131880:CDS |
GAAAGCCGAAGCTCACGGGT+GGG | 0.641161 | 7_3:+84543254 | Msa1131880:CDS |
TCCGTTCAGAATATTCGGGG+TGG | 0.641896 | 7_3:+84543407 | Msa1131880:CDS |
TTGCATGTGTCTAAACCACA+AGG | 0.642211 | 7_3:+84548779 | Msa1131880:CDS |
AAAATTACAAGAACGAGCAG+AGG | 0.645722 | 7_3:+84546743 | Msa1131880:CDS |
GTGGTTCGTTAAAGGAACCG+AGG | 0.646692 | 7_3:+84548217 | Msa1131880:CDS |
GGATGTAGTTTCAGAGACAA+GGG | 0.648790 | 7_3:+84549834 | Msa1131880:CDS |
AGCCTATTACGACGAAACCA+AGG | 0.648944 | 7_3:-84548296 | None:intergenic |
ATAGACATGGATGTATCTTG+CGG | 0.650881 | 7_3:+84548563 | Msa1131880:intron |
TCCACCCCGAATATTCTGAA+CGG | 0.651915 | 7_3:-84543408 | None:intergenic |
TGTGTCACCACGGCTAAGGG+CGG | 0.653750 | 7_3:+84547271 | Msa1131880:CDS |
CCTACTCCTAAGCCAAGTGA+TGG | 0.654089 | 7_3:-84547350 | None:intergenic |
AACCGAGGGTTGGACCGGTG+TGG | 0.658523 | 7_3:+84548232 | Msa1131880:CDS |
CCAGCAAATGATGACCAAAG+TGG | 0.662394 | 7_3:+84549191 | Msa1131880:CDS |
GATGCCTTAGCACGTCGTCG+AGG | 0.676702 | 7_3:+84544812 | Msa1131880:CDS |
CAGGCAAATCAAGCCTACCA+AGG | 0.679852 | 7_3:+84549237 | Msa1131880:CDS |
AAACCAGTGAGTTTCTTGAG+GGG | 0.680412 | 7_3:-84548332 | None:intergenic |
TGAAATGGTGGAGATAACGT+TGG | 0.685098 | 7_3:+84543364 | Msa1131880:CDS |
TGACAATATCAACTTTCACA+AGG | 0.691296 | 7_3:+84547402 | Msa1131880:CDS |
TGCATGTGTCTAAACCACAA+GGG | 0.711409 | 7_3:+84548780 | Msa1131880:CDS |
AAGCACAACCATGACCACAC+CGG | 0.711632 | 7_3:-84548246 | None:intergenic |
AGGCACATACCATTCAAATG+GGG | 0.712031 | 7_3:-84548852 | None:intergenic |
CATGGGCTATTGTGTCACCA+CGG | 0.732084 | 7_3:+84547261 | Msa1131880:CDS |
ATATGCTGCCCTTATCATGG+AGG | 0.734728 | 7_3:+84546767 | Msa1131880:CDS |
GATCTGGCTACAAATCTGTG+AGG | 0.758785 | 7_3:+84548631 | Msa1131880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTGCATATAAA+TGG | + | chr7_3:84543761-84543780 | Msa1131880:intron | 10.0% |
!!! | CTAAGTTTTTTAAAAAAAAA+AGG | + | chr7_3:84544595-84544614 | Msa1131880:intron | 10.0% |
!!! | ATATAATAAACTTTGTTTAA+GGG | - | chr7_3:84546029-84546048 | None:intergenic | 10.0% |
!! | TTAAACAAAGTTTATTATAT+GGG | + | chr7_3:84546029-84546048 | Msa1131880:intron | 10.0% |
!!! | TTTAATGTTAATTTGTTTAA+TGG | - | chr7_3:84546611-84546630 | None:intergenic | 10.0% |
!!! | TAACATTAAATTTTCTAATA+TGG | + | chr7_3:84546621-84546640 | Msa1131880:intron | 10.0% |
!! | CAAATTAAAATATAATTTAC+TGG | - | chr7_3:84546911-84546930 | None:intergenic | 10.0% |
!!! | AAAAAAATCTTATTGTTTTA+GGG | - | chr7_3:84547439-84547458 | None:intergenic | 10.0% |
!!! | AAAAAAAATCTTATTGTTTT+AGG | - | chr7_3:84547440-84547459 | None:intergenic | 10.0% |
!!! | TAAAATAACATATTAGATTT+TGG | + | chr7_3:84547959-84547978 | Msa1131880:intron | 10.0% |
!! | TGTATGTTATATTATAAATT+TGG | - | chr7_3:84550000-84550019 | None:intergenic | 10.0% |
!! | ATAATAATATAGATGTATTA+CGG | - | chr7_3:84550172-84550191 | None:intergenic | 10.0% |
!! | TACTTCGTATATAATATAAT+TGG | + | chr7_3:84543029-84543048 | Msa1131880:five_prime_UTR | 15.0% |
!! | GAAAAGTAAAACAAATAATT+AGG | + | chr7_3:84543179-84543198 | Msa1131880:five_prime_UTR | 15.0% |
!!! | TAATATTAGTTTTTTTTTGG+TGG | - | chr7_3:84544720-84544739 | None:intergenic | 15.0% |
!! | TATTATGAGATTTATATGAA+TGG | + | chr7_3:84545407-84545426 | Msa1131880:intron | 15.0% |
!! | TAATATAGAAATATTGTCAT+GGG | - | chr7_3:84545602-84545621 | None:intergenic | 15.0% |
!!! | TTATTTTAACAAATGTCTAA+AGG | + | chr7_3:84545623-84545642 | Msa1131880:intron | 15.0% |
!!! | AATTTTTTATTTAGTTCCAT+AGG | + | chr7_3:84545902-84545921 | Msa1131880:intron | 15.0% |
!!! | TTTTTTTTGACATGTAATAT+TGG | + | chr7_3:84545958-84545977 | Msa1131880:intron | 15.0% |
!! | TAATATTGGAATATTCTTTA+TGG | + | chr7_3:84545972-84545991 | Msa1131880:intron | 15.0% |
!!! | CATATAATAAACTTTGTTTA+AGG | - | chr7_3:84546030-84546049 | None:intergenic | 15.0% |
!! | CTTAAACAAAGTTTATTATA+TGG | + | chr7_3:84546028-84546047 | Msa1131880:intron | 15.0% |
!! | ATCAACTAATTGTAAAAAAA+TGG | + | chr7_3:84546285-84546304 | Msa1131880:intron | 15.0% |
!!! | TATAAACTTGACAATTTTTT+AGG | + | chr7_3:84547632-84547651 | Msa1131880:intron | 15.0% |
!! | AAATAATTCATATACATCAT+CGG | - | chr7_3:84549327-84549346 | None:intergenic | 15.0% |
!!! | CTCAATTTTAAATAAAATGT+AGG | + | chr7_3:84549392-84549411 | Msa1131880:intron | 15.0% |
!! | TAATAATATAGATGTATTAC+GGG | - | chr7_3:84550171-84550190 | None:intergenic | 15.0% |
!!! | CTTGTTGTAAACATTTATTT+TGG | + | chr7_3:84542985-84543004 | Msa1131880:five_prime_UTR | 20.0% |
!! | TATTATATACGAAGTATATG+TGG | - | chr7_3:84543025-84543044 | None:intergenic | 20.0% |
!! | GTAAAACAAATAATTAGGAA+TGG | + | chr7_3:84543184-84543203 | Msa1131880:exon | 20.0% |
!! | GGTCATTAAGTTAAAAAAAA+TGG | + | chr7_3:84543802-84543821 | Msa1131880:intron | 20.0% |
!! | TGCTAAAAAAAACATATGTA+TGG | + | chr7_3:84543837-84543856 | Msa1131880:intron | 20.0% |
!! | ATATGTATGGTCTATTAATT+AGG | + | chr7_3:84543850-84543869 | Msa1131880:intron | 20.0% |
!! | TCAAGACATTTCATTTATAA+TGG | + | chr7_3:84543919-84543938 | Msa1131880:intron | 20.0% |
!! | AGACTTTAATTGAGATAAAA+TGG | - | chr7_3:84544302-84544321 | None:intergenic | 20.0% |
!! | CAAGAAAAATGTTACTATTT+AGG | + | chr7_3:84544433-84544452 | Msa1131880:intron | 20.0% |
!! | AATGGAGATGATATTATTAT+TGG | + | chr7_3:84545425-84545444 | Msa1131880:intron | 20.0% |
!! | ATGGAGATGATATTATTATT+GGG | + | chr7_3:84545426-84545445 | Msa1131880:intron | 20.0% |
!! | CTAATATAGAAATATTGTCA+TGG | - | chr7_3:84545603-84545622 | None:intergenic | 20.0% |
!! | TGTATACAATATGTAACATT+AGG | - | chr7_3:84545785-84545804 | None:intergenic | 20.0% |
!!! | ACACACACTTTATTTTTAAT+CGG | - | chr7_3:84545873-84545892 | None:intergenic | 20.0% |
!! | ACTAATTGTAAAAAAATGGT+TGG | + | chr7_3:84546289-84546308 | Msa1131880:intron | 20.0% |
!!! | TAATTTGTTTAATGGTCAAT+TGG | - | chr7_3:84546603-84546622 | None:intergenic | 20.0% |
!!! | TTGTAATTTTGATAGCTTAT+TGG | - | chr7_3:84546733-84546752 | None:intergenic | 20.0% |
!! | CTTCATTAAGAATTTACAAT+CGG | - | chr7_3:84547586-84547605 | None:intergenic | 20.0% |
!!! | AGAGCTTATTTTACTTTATT+AGG | + | chr7_3:84547701-84547720 | Msa1131880:intron | 20.0% |
!! | TAGAAATATGACACAAATTA+AGG | + | chr7_3:84547818-84547837 | Msa1131880:intron | 20.0% |
!!! | TTTTTTTCCTCTTACTATTT+AGG | + | chr7_3:84548049-84548068 | Msa1131880:intron | 20.0% |
!!! | TATGTTCTTTTTATCATTCA+TGG | + | chr7_3:84548395-84548414 | Msa1131880:CDS | 20.0% |
!! | AGATGAAAAAACAACTAAAA+TGG | - | chr7_3:84548497-84548516 | None:intergenic | 20.0% |
!! | TTTACAAAATTGAAGATGAA+GGG | - | chr7_3:84548693-84548712 | None:intergenic | 20.0% |
!! | ATTTACAAAATTGAAGATGA+AGG | - | chr7_3:84548694-84548713 | None:intergenic | 20.0% |
!! | TATTCATTGAAAAAAAATCC+AGG | + | chr7_3:84548727-84548746 | Msa1131880:intron | 20.0% |
!!! | AAGATTTTGGAACTTAAATT+AGG | - | chr7_3:84548875-84548894 | None:intergenic | 20.0% |
!!! | CAAGTATAAGAATAAGATTT+TGG | - | chr7_3:84548888-84548907 | None:intergenic | 20.0% |
!!! | GAGCTATGTTATTTTAAATT+TGG | + | chr7_3:84549083-84549102 | Msa1131880:intron | 20.0% |
!!! | TATTTTTCTATGAAATCGAT+AGG | + | chr7_3:84549342-84549361 | Msa1131880:intron | 20.0% |
!!! | GATTTTACTCTTAATTAGTT+TGG | + | chr7_3:84549944-84549963 | Msa1131880:intron | 20.0% |
!! | AATGCTGTATAATAGAAATT+AGG | + | chr7_3:84550314-84550333 | Msa1131880:three_prime_UTR | 20.0% |
! | AAGTTTATGACAAAAAACGT+TGG | + | chr7_3:84543596-84543615 | Msa1131880:CDS | 25.0% |
!! | TGGAAGTTCATTTGAAATAA+TGG | + | chr7_3:84543781-84543800 | Msa1131880:intron | 25.0% |
!! | TAGATAAATAGCATTTTCCA+TGG | + | chr7_3:84544127-84544146 | Msa1131880:intron | 25.0% |
! | AATTAACACTGTTAGGATAT+AGG | - | chr7_3:84545284-84545303 | None:intergenic | 25.0% |
! | ATCAATCAATTAACACTGTT+AGG | - | chr7_3:84545291-84545310 | None:intergenic | 25.0% |
! | TGAACATGTTAATTGTTACA+AGG | + | chr7_3:84545310-84545329 | Msa1131880:intron | 25.0% |
!!! | AATGTGCATTTAATTTGCAA+TGG | - | chr7_3:84545342-84545361 | None:intergenic | 25.0% |
!!! | TAACATTGAATAAGTGTTGA+TGG | + | chr7_3:84545807-84545826 | Msa1131880:intron | 25.0% |
! | ATAATTCTTTCGTTCTCTAT+AGG | - | chr7_3:84545837-84545856 | None:intergenic | 25.0% |
! | ATTGGAATATTCTTTATGGT+TGG | + | chr7_3:84545976-84545995 | Msa1131880:intron | 25.0% |
! | ATCTCATCATATCTCATTAA+TGG | - | chr7_3:84546127-84546146 | None:intergenic | 25.0% |
!! | TTGTAAAAAAATGGTTGGTT+AGG | + | chr7_3:84546294-84546313 | Msa1131880:intron | 25.0% |
!!! | AGTACAGTATTTTTGACATT+AGG | - | chr7_3:84546420-84546439 | None:intergenic | 25.0% |
!!! | TAGAGAACTAGCTTATTTTA+TGG | + | chr7_3:84547132-84547151 | Msa1131880:CDS | 25.0% |
!!! | AAGTTGATATTGTCATCAAA+TGG | - | chr7_3:84547397-84547416 | None:intergenic | 25.0% |
!! | ATTTTACTTTATTAGGTCAC+TGG | + | chr7_3:84547708-84547727 | Msa1131880:intron | 25.0% |
! | ATGAAAGACCTGATAATTAT+TGG | + | chr7_3:84548195-84548214 | Msa1131880:CDS | 25.0% |
! | GAACATATACAATGACAAAA+AGG | - | chr7_3:84548382-84548401 | None:intergenic | 25.0% |
! | CAAGAAATGGTATAAGAAAA+CGG | + | chr7_3:84548436-84548455 | Msa1131880:CDS | 25.0% |
! | AAATGGAACAAAAAACACAT+TGG | - | chr7_3:84548480-84548499 | None:intergenic | 25.0% |
! | TTTGATATTGTTCATGATCA+TGG | + | chr7_3:84549126-84549145 | Msa1131880:intron | 25.0% |
! | ATTAATTACATTCATCGTCA+TGG | + | chr7_3:84549150-84549169 | Msa1131880:intron | 25.0% |
! | AAAAAGGTTTAACTATACCT+TGG | - | chr7_3:84549257-84549276 | None:intergenic | 25.0% |
! | ACACATTGAATCAATCATAA+TGG | - | chr7_3:84549290-84549309 | None:intergenic | 25.0% |
! | TTATAAACATTACGCCAATT+TGG | - | chr7_3:84549880-84549899 | None:intergenic | 25.0% |
!!! | ACTTACCAACTTTTTTTTCA+GGG | - | chr7_3:84549921-84549940 | None:intergenic | 25.0% |
!!! | TACTTACCAACTTTTTTTTC+AGG | - | chr7_3:84549922-84549941 | None:intergenic | 25.0% |
!!! | GAAAAAAAAGTTGGTAAGTA+TGG | + | chr7_3:84549922-84549941 | Msa1131880:intron | 25.0% |
! | ATAACATACATTGTGTTCTT+AGG | + | chr7_3:84550010-84550029 | Msa1131880:intron | 25.0% |
! | CTCTTTATGAAAATCAAACT+TGG | - | chr7_3:84550113-84550132 | None:intergenic | 25.0% |
!!! | TGAATCATTTTTTGTTGTAG+AGG | + | chr7_3:84550207-84550226 | Msa1131880:three_prime_UTR | 25.0% |
AGAGTAGATAGGATTGTTAT+GGG | - | chr7_3:84542948-84542967 | None:intergenic | 30.0% | |
AACAAGACTTGATGAGAAAT+TGG | - | chr7_3:84542971-84542990 | None:intergenic | 30.0% | |
CACCATACAATTTCTATCAT+AGG | + | chr7_3:84543072-84543091 | Msa1131880:five_prime_UTR | 30.0% | |
TGCCTATGATAGAAATTGTA+TGG | - | chr7_3:84543077-84543096 | None:intergenic | 30.0% | |
ACTAGTAAGAGAGTAGTAAT+TGG | + | chr7_3:84543144-84543163 | Msa1131880:five_prime_UTR | 30.0% | |
!!! | ATCTTTTAAGGCCTTTGATA+AGG | + | chr7_3:84543529-84543548 | Msa1131880:CDS | 30.0% |
! | ATCAAAACGCTTTTCAACTT+GGG | - | chr7_3:84543636-84543655 | None:intergenic | 30.0% |
ATGAAGCATAGACTATAACA+TGG | - | chr7_3:84543717-84543736 | None:intergenic | 30.0% | |
TGAAATGTCTTGAACTCTTA+TGG | - | chr7_3:84543912-84543931 | None:intergenic | 30.0% | |
!!! | AGAATTTTTCAAGACACATG+TGG | - | chr7_3:84544093-84544112 | None:intergenic | 30.0% |
ATTTAGGCACGTAACAAATA+AGG | + | chr7_3:84544449-84544468 | Msa1131880:intron | 30.0% | |
TTTAGGCACGTAACAAATAA+GGG | + | chr7_3:84544450-84544469 | Msa1131880:intron | 30.0% | |
CGTAACAAATAAGGGTTAAA+TGG | + | chr7_3:84544458-84544477 | Msa1131880:intron | 30.0% | |
! | CAAAGCTTTGATCTGTAATT+TGG | - | chr7_3:84544886-84544905 | None:intergenic | 30.0% |
TAAAGCAAGCAAAAACAAGA+AGG | + | chr7_3:84546243-84546262 | Msa1131880:intron | 30.0% | |
AAAGCAAGCAAAAACAAGAA+GGG | + | chr7_3:84546244-84546263 | Msa1131880:intron | 30.0% | |
TACAGAAGAAGAAGTAAAAG+AGG | + | chr7_3:84546517-84546536 | Msa1131880:CDS | 30.0% | |
ACTACTTATTACTAAGTGAG+TGG | + | chr7_3:84546577-84546596 | Msa1131880:intron | 30.0% | |
GTTTATTTACAAGACACTTG+TGG | + | chr7_3:84546650-84546669 | Msa1131880:intron | 30.0% | |
CAATATATCCAAGGTTGTTT+GGG | - | chr7_3:84546800-84546819 | None:intergenic | 30.0% | |
TCAATATATCCAAGGTTGTT+TGG | - | chr7_3:84546801-84546820 | None:intergenic | 30.0% | |
AAACAACCTTGGATATATTG+AGG | + | chr7_3:84546800-84546819 | Msa1131880:CDS | 30.0% | |
TACAAACCTCAATATATCCA+AGG | - | chr7_3:84546809-84546828 | None:intergenic | 30.0% | |
!! | TAAGTTGATCAGCTAGAAAA+TGG | + | chr7_3:84546849-84546868 | Msa1131880:intron | 30.0% |
TCACATAACTACAGATAGTA+GGG | + | chr7_3:84547042-84547061 | Msa1131880:CDS | 30.0% | |
! | AAGAGCACAATCCTATTAAA+CGG | + | chr7_3:84547104-84547123 | Msa1131880:CDS | 30.0% |
!!! | AGAACTAGCTTATTTTATGG+AGG | + | chr7_3:84547135-84547154 | Msa1131880:CDS | 30.0% |
!!! | CTTATTTTATGGAGGACAAT+TGG | + | chr7_3:84547143-84547162 | Msa1131880:CDS | 30.0% |
TGACAATATCAACTTTCACA+AGG | + | chr7_3:84547402-84547421 | Msa1131880:CDS | 30.0% | |
AATCTAAGTCATAATGTGAG+TGG | - | chr7_3:84547543-84547562 | None:intergenic | 30.0% | |
GAAGTCAATGATTCTTTATG+AGG | + | chr7_3:84547602-84547621 | Msa1131880:intron | 30.0% | |
GTATATTGGAGAAAAGTTCA+AGG | + | chr7_3:84547785-84547804 | Msa1131880:intron | 30.0% | |
! | TTAAGGAAGTGTAAACAGAT+TGG | + | chr7_3:84547835-84547854 | Msa1131880:intron | 30.0% |
! | ACTATTTAGGTGATAGCTTT+TGG | + | chr7_3:84548062-84548081 | Msa1131880:intron | 30.0% |
!!! | ATAGCTTTTGGAATTGCAAT+TGG | + | chr7_3:84548074-84548093 | Msa1131880:CDS | 30.0% |
!!! | TAGCTTTTGGAATTGCAATT+GGG | + | chr7_3:84548075-84548094 | Msa1131880:CDS | 30.0% |
TCTCCAAAAAACTGTTTCAT+GGG | - | chr7_3:84548176-84548195 | None:intergenic | 30.0% | |
ATCTCCAAAAAACTGTTTCA+TGG | - | chr7_3:84548177-84548196 | None:intergenic | 30.0% | |
AAAGACCTGATAATTATTGG+TGG | + | chr7_3:84548198-84548217 | Msa1131880:CDS | 30.0% | |
! | AATTATTGGTGGTTCGTTAA+AGG | + | chr7_3:84548209-84548228 | Msa1131880:CDS | 30.0% |
!!! | TCACTGGTTTTAATGCATTT+TGG | + | chr7_3:84548345-84548364 | Msa1131880:CDS | 30.0% |
TCTTATACCATTTCTTGCTA+AGG | - | chr7_3:84548433-84548452 | None:intergenic | 30.0% | |
TGATGTGACATATATAGACA+TGG | + | chr7_3:84548550-84548569 | Msa1131880:intron | 30.0% | |
!! | GTTAAACCTTTTTGATGATC+TGG | + | chr7_3:84549264-84549283 | Msa1131880:intron | 30.0% |
AAATAAAATGTAGGATGCCA+AGG | + | chr7_3:84549401-84549420 | Msa1131880:intron | 30.0% | |
TCTTTGAGTATGCTAATCAA+AGG | - | chr7_3:84549517-84549536 | None:intergenic | 30.0% | |
GTTCGTTTGAATGGTTTAAA+GGG | + | chr7_3:84549671-84549690 | Msa1131880:CDS | 30.0% | |
TTCGTTTGAATGGTTTAAAG+GGG | + | chr7_3:84549672-84549691 | Msa1131880:CDS | 30.0% | |
AAACACCCTGAAAAAAAAGT+TGG | + | chr7_3:84549913-84549932 | Msa1131880:CDS | 30.0% | |
!!! | TTCTTAGGTGTTTTTTACTG+TGG | + | chr7_3:84550025-84550044 | Msa1131880:intron | 30.0% |
!! | TTGGACTTTTCAAGAAAAAC+TGG | + | chr7_3:84550085-84550104 | Msa1131880:CDS | 30.0% |
!!! | CTTCACTTTTTGAGTTTGAT+TGG | + | chr7_3:84550291-84550310 | Msa1131880:three_prime_UTR | 30.0% |
GAGAGTAGATAGGATTGTTA+TGG | - | chr7_3:84542949-84542968 | None:intergenic | 35.0% | |
TGAGAAATTGGAGAGTAGAT+AGG | - | chr7_3:84542959-84542978 | None:intergenic | 35.0% | |
TAAGAGAGTAGTAATTGGCT+TGG | + | chr7_3:84543149-84543168 | Msa1131880:five_prime_UTR | 35.0% | |
! | AAGAGAGTAGTAATTGGCTT+GGG | + | chr7_3:84543150-84543169 | Msa1131880:five_prime_UTR | 35.0% |
!! | TTCCACTTTTGTTCTTGCTT+CGG | - | chr7_3:84543328-84543347 | None:intergenic | 35.0% |
TGACCTATCAACCTTATCAA+AGG | - | chr7_3:84543543-84543562 | None:intergenic | 35.0% | |
!! | AAGGTTGATAGGTCAAAATC+CGG | + | chr7_3:84543548-84543567 | Msa1131880:CDS | 35.0% |
ACAAAAAACGTTGGAAGTGA+AGG | + | chr7_3:84543605-84543624 | Msa1131880:CDS | 35.0% | |
! | CATCAAAACGCTTTTCAACT+TGG | - | chr7_3:84543637-84543656 | None:intergenic | 35.0% |
!!! | TGAAAAGCGTTTTGATGAGT+TGG | + | chr7_3:84543640-84543659 | Msa1131880:CDS | 35.0% |
TCTATGCACTACAACGTATA+TGG | + | chr7_3:84544378-84544397 | Msa1131880:intron | 35.0% | |
GGGTGTAAATGACAATGATT+AGG | + | chr7_3:84544752-84544771 | Msa1131880:intron | 35.0% | |
ATTAGGAATGAACGAGTCAA+AGG | + | chr7_3:84544769-84544788 | Msa1131880:intron | 35.0% | |
! | CAGATCAAAGCTTTGATTCA+AGG | + | chr7_3:84544891-84544910 | Msa1131880:CDS | 35.0% |
!!! | TCAAGGCTTCAAACCTTTTT+TGG | + | chr7_3:84544908-84544927 | Msa1131880:CDS | 35.0% |
GTCTTCTTACATGCCAAAAA+AGG | - | chr7_3:84544924-84544943 | None:intergenic | 35.0% | |
CTGACAAGTGACAACTTAAA+TGG | - | chr7_3:84545054-84545073 | None:intergenic | 35.0% | |
TTGAATTATGCAACTGAGTG+CGG | - | chr7_3:84545253-84545272 | None:intergenic | 35.0% | |
CTGTTAGGATATAGGAAACA+AGG | - | chr7_3:84545276-84545295 | None:intergenic | 35.0% | |
!! | CATTGAATAAGTGTTGATGG+TGG | + | chr7_3:84545810-84545829 | Msa1131880:intron | 35.0% |
AATTCCAATATTCACCAGCA+GGG | - | chr7_3:84545935-84545954 | None:intergenic | 35.0% | |
AAATTCCAATATTCACCAGC+AGG | - | chr7_3:84545936-84545955 | None:intergenic | 35.0% | |
!! | AAGGGTGTCATATATATGCA+TGG | + | chr7_3:84546262-84546281 | Msa1131880:intron | 35.0% |
GATTATTGCCTTAAGTGCTT+CGG | + | chr7_3:84546707-84546726 | Msa1131880:intron | 35.0% | |
AAAATTACAAGAACGAGCAG+AGG | + | chr7_3:84546743-84546762 | Msa1131880:CDS | 35.0% | |
!!! | TTACTGGCTCAATTTTGATG+AGG | - | chr7_3:84546895-84546914 | None:intergenic | 35.0% |
TTATGTGTAGCTGTACAACT+TGG | + | chr7_3:84546985-84547004 | Msa1131880:intron | 35.0% | |
CTCACATAACTACAGATAGT+AGG | + | chr7_3:84547041-84547060 | Msa1131880:CDS | 35.0% | |
!! | CTAACTTCTGGCTTAACATT+TGG | - | chr7_3:84547075-84547094 | None:intergenic | 35.0% |
TAGGATTGTGCTCTTTAGTA+GGG | - | chr7_3:84547099-84547118 | None:intergenic | 35.0% | |
ATAGGATTGTGCTCTTTAGT+AGG | - | chr7_3:84547100-84547119 | None:intergenic | 35.0% | |
AGAGCACAATCCTATTAAAC+GGG | + | chr7_3:84547105-84547124 | Msa1131880:CDS | 35.0% | |
! | TCTCTAAAAGCCCGTTTAAT+AGG | - | chr7_3:84547118-84547137 | None:intergenic | 35.0% |
AGGACAATTGGAAACGTATT+TGG | + | chr7_3:84547155-84547174 | Msa1131880:CDS | 35.0% | |
! | GTATTTGGATCATAGCTCTA+TGG | + | chr7_3:84547170-84547189 | Msa1131880:CDS | 35.0% |
TATGTAGAAACACCATCACT+TGG | + | chr7_3:84547338-84547357 | Msa1131880:CDS | 35.0% | |
!! | CTTTTTGTGGTTGGTACATA+TGG | + | chr7_3:84547508-84547527 | Msa1131880:intron | 35.0% |
TAAGTCATAATGTGAGTGGA+AGG | - | chr7_3:84547539-84547558 | None:intergenic | 35.0% | |
GCTATCACCTAAATAGTAAG+AGG | - | chr7_3:84548059-84548078 | None:intergenic | 35.0% | |
!!! | AGCTTTTGGAATTGCAATTG+GGG | + | chr7_3:84548076-84548095 | Msa1131880:CDS | 35.0% |
!!! | GAACCCATGAAACAGTTTTT+TGG | + | chr7_3:84548170-84548189 | Msa1131880:CDS | 35.0% |
ACGAACCACCAATAATTATC+AGG | - | chr7_3:84548206-84548225 | None:intergenic | 35.0% | |
!! | CTTTCATTTTAGCACAACCT+TGG | + | chr7_3:84548279-84548298 | Msa1131880:CDS | 35.0% |
AAAACCAGTGAGTTTCTTGA+GGG | - | chr7_3:84548336-84548355 | None:intergenic | 35.0% | |
TAAAACCAGTGAGTTTCTTG+AGG | - | chr7_3:84548337-84548356 | None:intergenic | 35.0% | |
TCCTTTACCTTAGCAAGAAA+TGG | + | chr7_3:84548423-84548442 | Msa1131880:CDS | 35.0% | |
ACCATTTCTTGCTAAGGTAA+AGG | - | chr7_3:84548427-84548446 | None:intergenic | 35.0% | |
ATAGACATGGATGTATCTTG+CGG | + | chr7_3:84548563-84548582 | Msa1131880:intron | 35.0% | |
CAAATCTGTGAGGATACTAA+AGG | + | chr7_3:84548641-84548660 | Msa1131880:CDS | 35.0% | |
TAGGCACATACCATTCAAAT+GGG | - | chr7_3:84548856-84548875 | None:intergenic | 35.0% | |
TTAGGCACATACCATTCAAA+TGG | - | chr7_3:84548857-84548876 | None:intergenic | 35.0% | |
TTTACTTGCAATTTGTCTCC+AGG | + | chr7_3:84548930-84548949 | Msa1131880:intron | 35.0% | |
GGAGCTGATGTAATAGAAAA+GGG | - | chr7_3:84548959-84548978 | None:intergenic | 35.0% | |
AGGAGCTGATGTAATAGAAA+AGG | - | chr7_3:84548960-84548979 | None:intergenic | 35.0% | |
! | TTTTCTATTACATCAGCTCC+TGG | + | chr7_3:84548959-84548978 | Msa1131880:CDS | 35.0% |
GCACGAGTATTTATTTACCT+TGG | - | chr7_3:84549053-84549072 | None:intergenic | 35.0% | |
AGGTTTAACTATACCTTGGT+AGG | - | chr7_3:84549253-84549272 | None:intergenic | 35.0% | |
TAATGGCCAGATCATCAAAA+AGG | - | chr7_3:84549273-84549292 | None:intergenic | 35.0% | |
! | CTAAGAATTGATGGACCTTA+TGG | + | chr7_3:84549424-84549443 | Msa1131880:CDS | 35.0% |
!!! | TAGTTTTTGTAGTCTTGTGC+TGG | - | chr7_3:84549454-84549473 | None:intergenic | 35.0% |
TACGAAGTTCTTCTTCTAGT+AGG | + | chr7_3:84549472-84549491 | Msa1131880:CDS | 35.0% | |
CAAGAAGAAGACTTAGAAGA+AGG | + | chr7_3:84549559-84549578 | Msa1131880:CDS | 35.0% | |
AAGAAGACTTAGAAGAAGGA+GGG | + | chr7_3:84549563-84549582 | Msa1131880:CDS | 35.0% | |
GGTTCGTTTGAATGGTTTAA+AGG | + | chr7_3:84549670-84549689 | Msa1131880:CDS | 35.0% | |
! | AACTACATCCACACCATTTT+TGG | - | chr7_3:84549824-84549843 | None:intergenic | 35.0% |
ATATAGCTAGCTCCATTTGA+TGG | + | chr7_3:84550235-84550254 | Msa1131880:three_prime_UTR | 35.0% | |
TTACAACTCCATCCATCAAA+TGG | - | chr7_3:84550250-84550269 | None:intergenic | 35.0% | |
AAGAGAGCAAACATGAGTCA+TGG | + | chr7_3:84543213-84543232 | Msa1131880:CDS | 40.0% | |
!!! | CGCTGTTTTTTGGATGCTAA+AGG | - | chr7_3:84543302-84543321 | None:intergenic | 40.0% |
AACCGAAGCAAGAACAAAAG+TGG | + | chr7_3:84543323-84543342 | Msa1131880:CDS | 40.0% | |
GAACAAAAGTGGAAGCTTCA+AGG | + | chr7_3:84543334-84543353 | Msa1131880:CDS | 40.0% | |
! | TGAAATGGTGGAGATAACGT+TGG | + | chr7_3:84543364-84543383 | Msa1131880:CDS | 40.0% |
CGGTTTCCGTTCAGAATATT+CGG | + | chr7_3:84543402-84543421 | Msa1131880:CDS | 40.0% | |
GGTTTCCGTTCAGAATATTC+GGG | + | chr7_3:84543403-84543422 | Msa1131880:CDS | 40.0% | |
GTTTCCGTTCAGAATATTCG+GGG | + | chr7_3:84543404-84543423 | Msa1131880:CDS | 40.0% | |
TAAACTAAGACAGGTGTCTC+AGG | + | chr7_3:84543490-84543509 | Msa1131880:CDS | 40.0% | |
! | AGGCCTTTGATAAGGTTGAT+AGG | + | chr7_3:84543537-84543556 | Msa1131880:CDS | 40.0% |
ACTTAAGACCTTGTAGAGCA+CGG | - | chr7_3:84543580-84543599 | None:intergenic | 40.0% | |
AAAACGTTGGAAGTGAAGGT+TGG | + | chr7_3:84543609-84543628 | Msa1131880:CDS | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | - | chr7_3:84544006-84544025 | None:intergenic | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | + | chr7_3:84544014-84544033 | Msa1131880:intron | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | + | chr7_3:84544017-84544036 | Msa1131880:intron | 40.0% | |
ACGTTGCATTGAGATTTCCA+TGG | - | chr7_3:84544147-84544166 | None:intergenic | 40.0% | |
TCTAGTATGCATGCATGTCT+AGG | + | chr7_3:84544319-84544338 | Msa1131880:intron | 40.0% | |
TTTCACTAACGTCTGTAGCA+TGG | - | chr7_3:84544497-84544516 | None:intergenic | 40.0% | |
AGTAGCTGCTTCCATAACAA+AGG | + | chr7_3:84544838-84544857 | Msa1131880:CDS | 40.0% | |
TCGCAACTCTTCCTTTGTTA+TGG | - | chr7_3:84544852-84544871 | None:intergenic | 40.0% | |
! | AGGAAGAGTTGCGAGAATTT+TGG | + | chr7_3:84544858-84544877 | Msa1131880:CDS | 40.0% |
! | GGAAGAGTTGCGAGAATTTT+GGG | + | chr7_3:84544859-84544878 | Msa1131880:CDS | 40.0% |
ACTTGTCAGCATGAAAGAGA+TGG | + | chr7_3:84545065-84545084 | Msa1131880:intron | 40.0% | |
!! | TGGCCAAACGGGTTTTATAT+TGG | + | chr7_3:84545085-84545104 | Msa1131880:intron | 40.0% |
ACGCCAATATAAAACCCGTT+TGG | - | chr7_3:84545091-84545110 | None:intergenic | 40.0% | |
AGAAAACTTAGCACTCGACT+TGG | - | chr7_3:84545153-84545172 | None:intergenic | 40.0% | |
ATTATTGGGTCATGCTAACC+AGG | + | chr7_3:84545440-84545459 | Msa1131880:intron | 40.0% | |
! | AACCAGGTTTTCTGTGACAT+TGG | + | chr7_3:84545456-84545475 | Msa1131880:intron | 40.0% |
AACCAATGTCACAGAAAACC+TGG | - | chr7_3:84545461-84545480 | None:intergenic | 40.0% | |
ATTGGTTAGAACGATCATGC+TGG | + | chr7_3:84545474-84545493 | Msa1131880:intron | 40.0% | |
AACGATCATGCTGGTATTTC+TGG | + | chr7_3:84545483-84545502 | Msa1131880:intron | 40.0% | |
ACGATCATGCTGGTATTTCT+GGG | + | chr7_3:84545484-84545503 | Msa1131880:intron | 40.0% | |
TTATCCCTGCTGGTGAATAT+TGG | + | chr7_3:84545928-84545947 | Msa1131880:intron | 40.0% | |
CTTTAGTAGGGACTAACTTC+TGG | - | chr7_3:84547087-84547106 | None:intergenic | 40.0% | |
ATAGCCCATGACATGGAAAA+CGG | - | chr7_3:84547251-84547270 | None:intergenic | 40.0% | |
CATGTTAAACTTGAGCGTCT+CGG | - | chr7_3:84547299-84547318 | None:intergenic | 40.0% | |
ACATACAGGCAACAAGATCA+AGG | - | chr7_3:84547323-84547342 | None:intergenic | 40.0% | |
! | GTGATGGTGTTTCTACATAC+AGG | - | chr7_3:84547337-84547356 | None:intergenic | 40.0% |
!!! | TGCTTGACTTGCACTTTTTG+TGG | + | chr7_3:84547495-84547514 | Msa1131880:intron | 40.0% |
!! | TGACTTGCACTTTTTGTGGT+TGG | + | chr7_3:84547499-84547518 | Msa1131880:intron | 40.0% |
AATATACCCTACCATGTCGA+GGG | - | chr7_3:84547772-84547791 | None:intergenic | 40.0% | |
! | TTTGGAATTGCAATTGGGGT+TGG | + | chr7_3:84548080-84548099 | Msa1131880:CDS | 40.0% |
CTGTGGCGTGTAATAATCTT+GGG | - | chr7_3:84548139-84548158 | None:intergenic | 40.0% | |
TCTGTGGCGTGTAATAATCT+TGG | - | chr7_3:84548140-84548159 | None:intergenic | 40.0% | |
GGGTTCATATTCTTCATCTG+TGG | - | chr7_3:84548156-84548175 | None:intergenic | 40.0% | |
AACCTTGGTTTCGTCGTAAT+AGG | + | chr7_3:84548294-84548313 | Msa1131880:CDS | 40.0% | |
AAACCAGTGAGTTTCTTGAG+GGG | - | chr7_3:84548335-84548354 | None:intergenic | 40.0% | |
GCGGTTCCAATGATACTATA+CGG | + | chr7_3:84548582-84548601 | Msa1131880:CDS | 40.0% | |
TCGCATCCGTATAGTATCAT+TGG | - | chr7_3:84548591-84548610 | None:intergenic | 40.0% | |
TTGCATGTGTCTAAACCACA+AGG | + | chr7_3:84548779-84548798 | Msa1131880:CDS | 40.0% | |
TGCATGTGTCTAAACCACAA+GGG | + | chr7_3:84548780-84548799 | Msa1131880:CDS | 40.0% | |
CTAGTGTACTTAAACCCTTG+TGG | - | chr7_3:84548797-84548816 | None:intergenic | 40.0% | |
CAAGGGTTTAAGTACACTAG+TGG | + | chr7_3:84548797-84548816 | Msa1131880:CDS | 40.0% | |
CAGATATCTCCCCATTTGAA+TGG | + | chr7_3:84548843-84548862 | Msa1131880:CDS | 40.0% | |
AGGCACATACCATTCAAATG+GGG | - | chr7_3:84548855-84548874 | None:intergenic | 40.0% | |
TGTAATAGAAAAGGGATGCC+TGG | - | chr7_3:84548951-84548970 | None:intergenic | 40.0% | |
ACGCTTATATAGTCATCTCC+AGG | - | chr7_3:84548980-84548999 | None:intergenic | 40.0% | |
AAGCGTTCACATTCGAACTT+TGG | + | chr7_3:84548994-84549013 | Msa1131880:CDS | 40.0% | |
AGCGTTCACATTCGAACTTT+GGG | + | chr7_3:84548995-84549014 | Msa1131880:CDS | 40.0% | |
ACATTCGAACTTTGGGTGAT+TGG | + | chr7_3:84549002-84549021 | Msa1131880:CDS | 40.0% | |
ATGCCAAGGCTAAGAATTGA+TGG | + | chr7_3:84549415-84549434 | Msa1131880:CDS | 40.0% | |
GTTCTTCTTCTAGTAGGACT+AGG | + | chr7_3:84549478-84549497 | Msa1131880:CDS | 40.0% | |
CTTCTAGTAGGACTAGGAAT+CGG | + | chr7_3:84549484-84549503 | Msa1131880:CDS | 40.0% | |
GAAGAAGACTTAGAAGAAGG+AGG | + | chr7_3:84549562-84549581 | Msa1131880:CDS | 40.0% | |
AGAAGACTTAGAAGAAGGAG+GGG | + | chr7_3:84549564-84549583 | Msa1131880:CDS | 40.0% | |
!! | CAAGCGAGCCTATTTCTATT+GGG | + | chr7_3:84549633-84549652 | Msa1131880:CDS | 40.0% |
GCGAGTAACCCAATAGAAAT+AGG | - | chr7_3:84549644-84549663 | None:intergenic | 40.0% | |
GTTTAAAGGGGTGATGAATG+AGG | + | chr7_3:84549684-84549703 | Msa1131880:CDS | 40.0% | |
TGCACAAGTGTGTATGAAGA+AGG | + | chr7_3:84549751-84549770 | Msa1131880:CDS | 40.0% | |
!!! | ACCATTTTTGGCATGGTGAA+GGG | - | chr7_3:84549812-84549831 | None:intergenic | 40.0% |
TGGATGTAGTTTCAGAGACA+AGG | + | chr7_3:84549833-84549852 | Msa1131880:CDS | 40.0% | |
GGATGTAGTTTCAGAGACAA+GGG | + | chr7_3:84549834-84549853 | Msa1131880:CDS | 40.0% | |
! | GGGTTAAGACACATTTTGCT+AGG | + | chr7_3:84549854-84549873 | Msa1131880:CDS | 40.0% |
! | CACATTTTGCTAGGCCAAAT+TGG | + | chr7_3:84549863-84549882 | Msa1131880:CDS | 40.0% |
CGAACTAAGAAGGCTTTCTT+TGG | + | chr7_3:84550066-84550085 | Msa1131880:CDS | 40.0% | |
GCACACAGATTCTACGTACT+TGG | + | chr7_3:84543119-84543138 | Msa1131880:five_prime_UTR | 45.0% | |
GAGCAAACATGAGTCATGGT+CGG | + | chr7_3:84543217-84543236 | Msa1131880:CDS | 45.0% | |
!!! | GCTTCGGTTTCGCTGTTTTT+TGG | - | chr7_3:84543312-84543331 | None:intergenic | 45.0% |
AGTGGAAGCTTCAAGGATGA+CGG | + | chr7_3:84543341-84543360 | Msa1131880:CDS | 45.0% | |
! | CTTCAAGGATGACGGTGAAA+TGG | + | chr7_3:84543349-84543368 | Msa1131880:CDS | 45.0% |
TCCACCCCGAATATTCTGAA+CGG | - | chr7_3:84543411-84543430 | None:intergenic | 45.0% | |
GCTTTCGGCTAAACTAAGAC+AGG | + | chr7_3:84543481-84543500 | Msa1131880:CDS | 45.0% | |
! | GAAGCGCATGGCATCTTTTA+AGG | + | chr7_3:84543517-84543536 | Msa1131880:CDS | 45.0% |
CTTAAGACCTTGTAGAGCAC+GGG | - | chr7_3:84543579-84543598 | None:intergenic | 45.0% | |
!! | TTTTGATGAGTTGGCTGTGG+AGG | + | chr7_3:84543649-84543668 | Msa1131880:CDS | 45.0% |
! | TTTGATGAGTTGGCTGTGGA+GGG | + | chr7_3:84543650-84543669 | Msa1131880:CDS | 45.0% |
! | CACTGGCTAAATCGAGTCTT+GGG | - | chr7_3:84543683-84543702 | None:intergenic | 45.0% |
ACTCGATTTAGCCAGTGCAT+AGG | + | chr7_3:84543686-84543705 | Msa1131880:CDS | 45.0% | |
ACATGGACATACCTATGCAC+TGG | - | chr7_3:84543700-84543719 | None:intergenic | 45.0% | |
! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr7_3:84544034-84544053 | Msa1131880:intron | 45.0% |
AACGAGTCAAAGGAGTTTGC+TGG | + | chr7_3:84544779-84544798 | Msa1131880:CDS | 45.0% | |
GCATGAAAGAGATGGCCAAA+CGG | + | chr7_3:84545073-84545092 | Msa1131880:intron | 45.0% | |
CATGAAAGAGATGGCCAAAC+GGG | + | chr7_3:84545074-84545093 | Msa1131880:intron | 45.0% | |
CCAGCAGGGATAATTTCCTA+TGG | - | chr7_3:84545921-84545940 | None:intergenic | 45.0% | |
CCATAGGAAATTATCCCTGC+TGG | + | chr7_3:84545918-84545937 | Msa1131880:intron | 45.0% | |
! | CTTATTGGCCGAAGCACTTA+AGG | - | chr7_3:84546718-84546737 | None:intergenic | 45.0% |
GGAATATGCTGCCCTTATCA+TGG | + | chr7_3:84546764-84546783 | Msa1131880:CDS | 45.0% | |
ATATGCTGCCCTTATCATGG+AGG | + | chr7_3:84546767-84546786 | Msa1131880:CDS | 45.0% | |
GTTATGTGAGCTGATTGTGC+TGG | - | chr7_3:84547031-84547050 | None:intergenic | 45.0% | |
! | TTTGCGCAGCACTTTTCACT+TGG | + | chr7_3:84547200-84547219 | Msa1131880:CDS | 45.0% |
TGACACAATAGCCCATGACA+TGG | - | chr7_3:84547258-84547277 | None:intergenic | 45.0% | |
TATTGTGTCACCACGGCTAA+GGG | + | chr7_3:84547268-84547287 | Msa1131880:CDS | 45.0% | |
CGAGACGCTCAAGTTTAACA+TGG | + | chr7_3:84547297-84547316 | Msa1131880:CDS | 45.0% | |
GAAACACCATCACTTGGCTT+AGG | + | chr7_3:84547344-84547363 | Msa1131880:CDS | 45.0% | |
ATATACCCTACCATGTCGAG+GGG | - | chr7_3:84547771-84547790 | None:intergenic | 45.0% | |
CAATATACCCTACCATGTCG+AGG | - | chr7_3:84547773-84547792 | None:intergenic | 45.0% | |
CTCGACATGGTAGGGTATAT+TGG | + | chr7_3:84547771-84547790 | Msa1131880:intron | 45.0% | |
TGGTTCGTTAAAGGAACCGA+GGG | + | chr7_3:84548218-84548237 | Msa1131880:CDS | 45.0% | |
TGTGGTCATGGTTGTGCTTA+TGG | + | chr7_3:84548250-84548269 | Msa1131880:CDS | 45.0% | |
AGCCTATTACGACGAAACCA+AGG | - | chr7_3:84548299-84548318 | None:intergenic | 45.0% | |
!!! | GTTTCTTGAGGGGTTTTGGA+AGG | - | chr7_3:84548325-84548344 | None:intergenic | 45.0% |
! | GTGAGTTTCTTGAGGGGTTT+TGG | - | chr7_3:84548329-84548348 | None:intergenic | 45.0% |
AAACCCCTCAAGAAACTCAC+TGG | + | chr7_3:84548329-84548348 | Msa1131880:CDS | 45.0% | |
CTACTGCGTGCATTTAGATC+TGG | + | chr7_3:84548615-84548634 | Msa1131880:CDS | 45.0% | |
GATCTGGCTACAAATCTGTG+AGG | + | chr7_3:84548631-84548650 | Msa1131880:CDS | 45.0% | |
TGCAATGCCAGTACATTTCC+CGG | - | chr7_3:84548764-84548783 | None:intergenic | 45.0% | |
TGATTGGACGTCACAACTGA+AGG | + | chr7_3:84549018-84549037 | Msa1131880:CDS | 45.0% | |
GATTGGACGTCACAACTGAA+GGG | + | chr7_3:84549019-84549038 | Msa1131880:CDS | 45.0% | |
!!! | ACTGAAGGGTATTTTCGCCA+AGG | + | chr7_3:84549033-84549052 | Msa1131880:CDS | 45.0% |
TTCATCGTCATGGTTTACGC+AGG | + | chr7_3:84549160-84549179 | Msa1131880:intron | 45.0% | |
CCACTTTGGTCATCATTTGC+TGG | - | chr7_3:84549194-84549213 | None:intergenic | 45.0% | |
CCAGCAAATGATGACCAAAG+TGG | + | chr7_3:84549191-84549210 | Msa1131880:CDS | 45.0% | |
CAGCTCTTAGAAGACCACTT+TGG | - | chr7_3:84549208-84549227 | None:intergenic | 45.0% | |
CTAAGAGCTGATATGCTACC+AGG | + | chr7_3:84549218-84549237 | Msa1131880:CDS | 45.0% | |
GGTCCATCAATTCTTAGCCT+TGG | - | chr7_3:84549421-84549440 | None:intergenic | 45.0% | |
CCAATAGAAATAGGCTCGCT+TGG | - | chr7_3:84549635-84549654 | None:intergenic | 45.0% | |
!! | CCAAGCGAGCCTATTTCTAT+TGG | + | chr7_3:84549632-84549651 | Msa1131880:CDS | 45.0% |
!! | TGAGGTAGCGGAGAATGATA+AGG | + | chr7_3:84549702-84549721 | Msa1131880:CDS | 45.0% |
! | GTAGCGGAGAATGATAAGGA+AGG | + | chr7_3:84549706-84549725 | Msa1131880:CDS | 45.0% |
TCCCTTCACCATGCCAAAAA+TGG | + | chr7_3:84549808-84549827 | Msa1131880:CDS | 45.0% | |
!!! | CACCATTTTTGGCATGGTGA+AGG | - | chr7_3:84549813-84549832 | None:intergenic | 45.0% |
TCACCATGCCAAAAATGGTG+TGG | + | chr7_3:84549813-84549832 | Msa1131880:CDS | 45.0% | |
!!! | CATCCACACCATTTTTGGCA+TGG | - | chr7_3:84549819-84549838 | None:intergenic | 45.0% |
! | GATTGGTTGGCGAACTAAGA+AGG | + | chr7_3:84550056-84550075 | Msa1131880:CDS | 45.0% |
AGCTAGCTCCATTTGATGGA+TGG | + | chr7_3:84550239-84550258 | Msa1131880:three_prime_UTR | 45.0% | |
!!! | TAAGTTTTTTAAAAAAAAAA+GGG | + | chr7_3:84544596-84544615 | Msa1131880:intron | 5.0% |
!!! | AAATAATATTAGTTTTTTTT+TGG | - | chr7_3:84544723-84544742 | None:intergenic | 5.0% |
!!! | ACTAATATTATTTTTTAATT+TGG | + | chr7_3:84544730-84544749 | Msa1131880:intron | 5.0% |
!!! | CTAATATTATTTTTTAATTT+GGG | + | chr7_3:84544731-84544750 | Msa1131880:intron | 5.0% |
!!! | TAATATTATTTTTTAATTTG+GGG | + | chr7_3:84544732-84544751 | Msa1131880:intron | 5.0% |
! | CAAGGATGACGGTGAAATGG+TGG | + | chr7_3:84543352-84543371 | Msa1131880:CDS | 50.0% |
GAACGGAAACCGAGTCATCA+CGG | - | chr7_3:84543394-84543413 | None:intergenic | 50.0% | |
TCCGTTCAGAATATTCGGGG+TGG | + | chr7_3:84543407-84543426 | Msa1131880:CDS | 50.0% | |
AGTTTAGCCGAAAGCGACGA+CGG | - | chr7_3:84543476-84543495 | None:intergenic | 50.0% | |
!! | GCGTTTTGATGAGTTGGCTG+TGG | + | chr7_3:84543646-84543665 | Msa1131880:CDS | 50.0% |
!! | GCACTGGCTAAATCGAGTCT+TGG | - | chr7_3:84543684-84543703 | None:intergenic | 50.0% |
TGCCACAATTCAAGGAGGTG+TGG | + | chr7_3:84544022-84544041 | Msa1131880:intron | 50.0% | |
AGCCACACCTCCTTGAATTG+TGG | - | chr7_3:84544027-84544046 | None:intergenic | 50.0% | |
TATACCTCGACGACGTGCTA+AGG | - | chr7_3:84544819-84544838 | None:intergenic | 50.0% | |
TCAGCATTCTTGTCCACCCT+GGG | - | chr7_3:84546488-84546507 | None:intergenic | 50.0% | |
ATCAGCATTCTTGTCCACCC+TGG | - | chr7_3:84546489-84546508 | None:intergenic | 50.0% | |
AGGGTGGACAAGAATGCTGA+TGG | + | chr7_3:84546488-84546507 | Msa1131880:intron | 50.0% | |
GTCCAGCTCCTCCATGATAA+GGG | - | chr7_3:84546778-84546797 | None:intergenic | 50.0% | |
AAACGGCACGACGTTTGTAC+TGG | - | chr7_3:84547234-84547253 | None:intergenic | 50.0% | |
!!! | TCGTGCCGTTTTCCATGTCA+TGG | + | chr7_3:84547243-84547262 | Msa1131880:CDS | 50.0% |
!!! | CGTGCCGTTTTCCATGTCAT+GGG | + | chr7_3:84547244-84547263 | Msa1131880:CDS | 50.0% |
! | CATGGGCTATTGTGTCACCA+CGG | + | chr7_3:84547261-84547280 | Msa1131880:CDS | 50.0% |
CTATTGTGTCACCACGGCTA+AGG | + | chr7_3:84547267-84547286 | Msa1131880:CDS | 50.0% | |
CCTACTCCTAAGCCAAGTGA+TGG | - | chr7_3:84547353-84547372 | None:intergenic | 50.0% | |
CCATCACTTGGCTTAGGAGT+AGG | + | chr7_3:84547350-84547369 | Msa1131880:CDS | 50.0% | |
!! | GGTCACTGGTGCTATCAACA+CGG | + | chr7_3:84547722-84547741 | Msa1131880:intron | 50.0% |
CATGTCGAGGGGCTATTTGT+GGG | - | chr7_3:84547760-84547779 | None:intergenic | 50.0% | |
AAATAGCCCCTCGACATGGT+AGG | + | chr7_3:84547762-84547781 | Msa1131880:intron | 50.0% | |
AATAGCCCCTCGACATGGTA+GGG | + | chr7_3:84547763-84547782 | Msa1131880:intron | 50.0% | |
GTGGTTCGTTAAAGGAACCG+AGG | + | chr7_3:84548217-84548236 | Msa1131880:CDS | 50.0% | |
TCGTTAAAGGAACCGAGGGT+TGG | + | chr7_3:84548222-84548241 | Msa1131880:CDS | 50.0% | |
AAGCACAACCATGACCACAC+CGG | - | chr7_3:84548249-84548268 | None:intergenic | 50.0% | |
AATCCAGGTTGCAGTGTACC+CGG | + | chr7_3:84548742-84548761 | Msa1131880:intron | 50.0% | |
AGTGTACCCGGGAAATGTAC+TGG | + | chr7_3:84548754-84548773 | Msa1131880:CDS | 50.0% | |
GCAATGCCAGTACATTTCCC+GGG | - | chr7_3:84548763-84548782 | None:intergenic | 50.0% | |
!! | CTTGGTAGGCTTGATTTGCC+TGG | - | chr7_3:84549239-84549258 | None:intergenic | 50.0% |
CAGGCAAATCAAGCCTACCA+AGG | + | chr7_3:84549237-84549256 | Msa1131880:CDS | 50.0% | |
! | TCTTGTGCTGGTGCTCCATA+AGG | - | chr7_3:84549442-84549461 | None:intergenic | 50.0% |
AGACTTAGAAGAAGGAGGGG+AGG | + | chr7_3:84549567-84549586 | Msa1131880:CDS | 50.0% | |
TAGGCTCGCTTGGTTGCAAA+AGG | - | chr7_3:84549625-84549644 | None:intergenic | 50.0% | |
TATTGGGTTACTCGCGAGCA+GGG | + | chr7_3:84549649-84549668 | Msa1131880:CDS | 50.0% | |
AGGGGTGATGAATGAGGTAG+CGG | + | chr7_3:84549690-84549709 | Msa1131880:CDS | 50.0% | |
TGTATGAAGAAGGCGACGCT+CGG | + | chr7_3:84549761-84549780 | Msa1131880:CDS | 50.0% | |
!!! | GTTTTTTACTGTGGAGCGCC+TGG | + | chr7_3:84550034-84550053 | Msa1131880:CDS | 50.0% |
CTTAGTTCGCCAACCAATCC+AGG | - | chr7_3:84550055-84550074 | None:intergenic | 50.0% | |
CTTCGGCTTTCTGTGCTCTC+TGG | - | chr7_3:84543245-84543264 | None:intergenic | 55.0% | |
GCACAGAAAGCCGAAGCTCA+CGG | + | chr7_3:84543249-84543268 | Msa1131880:CDS | 55.0% | |
CACAGAAAGCCGAAGCTCAC+GGG | + | chr7_3:84543250-84543269 | Msa1131880:CDS | 55.0% | |
GATGCTAAAGGCCCGCTTAG+CGG | - | chr7_3:84543290-84543309 | None:intergenic | 55.0% | |
GTTGGACGTCCGTGATGACT+CGG | + | chr7_3:84543382-84543401 | Msa1131880:CDS | 55.0% | |
! | ACTCGTGTGCCACTATCCCA+GGG | + | chr7_3:84546469-84546488 | Msa1131880:intron | 55.0% |
TCTTGTCCACCCTGGGATAG+TGG | - | chr7_3:84546481-84546500 | None:intergenic | 55.0% | |
TGCCCTTATCATGGAGGAGC+TGG | + | chr7_3:84546773-84546792 | Msa1131880:CDS | 55.0% | |
GGTCCAGCTCCTCCATGATA+AGG | - | chr7_3:84546779-84546798 | None:intergenic | 55.0% | |
GAGCTGGACCCAAACAACCT+TGG | + | chr7_3:84546789-84546808 | Msa1131880:CDS | 55.0% | |
CTTGGCTTAGGAGTAGGACC+AGG | + | chr7_3:84547356-84547375 | Msa1131880:CDS | 55.0% | |
CTTAGGAGTAGGACCAGGCT+TGG | + | chr7_3:84547361-84547380 | Msa1131880:CDS | 55.0% | |
GAGTAGGACCAGGCTTGGAA+TGG | + | chr7_3:84547366-84547385 | Msa1131880:CDS | 55.0% | |
TAGGACCAGGCTTGGAATGG+TGG | + | chr7_3:84547369-84547388 | Msa1131880:CDS | 55.0% | |
TGGAACCACCATTCCAAGCC+TGG | - | chr7_3:84547377-84547396 | None:intergenic | 55.0% | |
!! | GCTATTTGTGGGTTGGTGCG+TGG | - | chr7_3:84547749-84547768 | None:intergenic | 55.0% |
TCGAGGGGCTATTTGTGGGT+TGG | - | chr7_3:84547756-84547775 | None:intergenic | 55.0% | |
CCATGTCGAGGGGCTATTTG+TGG | - | chr7_3:84547761-84547780 | None:intergenic | 55.0% | |
CCACAAATAGCCCCTCGACA+TGG | + | chr7_3:84547758-84547777 | Msa1131880:intron | 55.0% | |
AAAGGAACCGAGGGTTGGAC+CGG | + | chr7_3:84548227-84548246 | Msa1131880:CDS | 55.0% | |
ATCCAGGTTGCAGTGTACCC+GGG | + | chr7_3:84548743-84548762 | Msa1131880:intron | 55.0% | |
CTTAGAAGAAGGAGGGGAGG+TGG | + | chr7_3:84549570-84549589 | Msa1131880:CDS | 55.0% | |
CTATTGGGTTACTCGCGAGC+AGG | + | chr7_3:84549648-84549667 | Msa1131880:CDS | 55.0% | |
GCGAGCAGGGTTCGTTTGAA+TGG | + | chr7_3:84549662-84549681 | Msa1131880:CDS | 55.0% | |
! | TTACTGTGGAGCGCCTGGAT+TGG | + | chr7_3:84550039-84550058 | Msa1131880:CDS | 55.0% |
AGAAAGCCGAAGCTCACGGG+TGG | + | chr7_3:84543253-84543272 | Msa1131880:CDS | 60.0% | |
GAAAGCCGAAGCTCACGGGT+GGG | + | chr7_3:84543254-84543273 | Msa1131880:CDS | 60.0% | |
TGAAGCCCACCCGTGAGCTT+CGG | - | chr7_3:84543262-84543281 | None:intergenic | 60.0% | |
TCGGGGTGGAGACACCGAAA+CGG | + | chr7_3:84543421-84543440 | Msa1131880:CDS | 60.0% | |
AGACACCGAAACGGCGCTTC+TGG | + | chr7_3:84543430-84543449 | Msa1131880:CDS | 60.0% | |
!! | GCTTGCCAGAAGCGCCGTTT+CGG | - | chr7_3:84543438-84543457 | None:intergenic | 60.0% |
AAACGGCGCTTCTGGCAAGC+CGG | + | chr7_3:84543438-84543457 | Msa1131880:CDS | 60.0% | |
ACGACGGACGCTTCTCAAGC+CGG | - | chr7_3:84543460-84543479 | None:intergenic | 60.0% | |
! | GAAGCGTCCGTCGTCGCTTT+CGG | + | chr7_3:84543466-84543485 | Msa1131880:CDS | 60.0% |
GTCTCAGGAGCTGAAGCGCA+TGG | + | chr7_3:84543505-84543524 | Msa1131880:CDS | 60.0% | |
TTGTAGAGCACGGGCAGCAC+CGG | - | chr7_3:84543570-84543589 | None:intergenic | 60.0% | |
GATGCCTTAGCACGTCGTCG+AGG | + | chr7_3:84544812-84544831 | Msa1131880:CDS | 60.0% | |
! | CACTCGTGTGCCACTATCCC+AGG | + | chr7_3:84546468-84546487 | Msa1131880:intron | 60.0% |
TGTGTCACCACGGCTAAGGG+CGG | + | chr7_3:84547271-84547290 | Msa1131880:CDS | 60.0% | |
TTCCCGGGTACACTGCAACC+TGG | - | chr7_3:84548748-84548767 | None:intergenic | 60.0% | |
!! | TGTGGAGCGCCTGGATTGGT+TGG | + | chr7_3:84550043-84550062 | Msa1131880:CDS | 60.0% |
! | AGCTCACGGGTGGGCTTCAG+CGG | + | chr7_3:84543263-84543282 | Msa1131880:CDS | 65.0% |
! | GGTGCTGCCCGTGCTCTACA+AGG | + | chr7_3:84543569-84543588 | Msa1131880:CDS | 65.0% |
! | CGTGTGCCACTATCCCAGGG+TGG | + | chr7_3:84546472-84546491 | Msa1131880:intron | 65.0% |
AACCGAGGGTTGGACCGGTG+TGG | + | chr7_3:84548232-84548251 | Msa1131880:CDS | 65.0% | |
GACCACACCGGTCCAACCCT+CGG | - | chr7_3:84548237-84548256 | None:intergenic | 65.0% | |
GGGTTGGACCGGTGTGGTCA+TGG | + | chr7_3:84548238-84548257 | Msa1131880:CDS | 65.0% | |
! | GCTCACGGGTGGGCTTCAGC+GGG | + | chr7_3:84543264-84543283 | Msa1131880:CDS | 70.0% |
GGCTTCAGCGGGCCGCTAAG+CGG | + | chr7_3:84543275-84543294 | Msa1131880:CDS | 70.0% | |
GCTTCAGCGGGCCGCTAAGC+GGG | + | chr7_3:84543276-84543295 | Msa1131880:CDS | 70.0% | |
CTCGGCACCGCCCTTAGCCG+TGG | - | chr7_3:84547281-84547300 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 84542927 | 84550342 | 84542927 | ID=Msa1131880;Name=Msa1131880 |
chr7_3 | mRNA | 84542927 | 84550342 | 84542927 | ID=Msa1131880-mRNA-1;Parent=Msa1131880;Name=Msa1131880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=276|1|0.91|1|1|1|12|201|888 |
chr7_3 | exon | 84542927 | 84543707 | 84542927 | ID=Msa1131880-mRNA-1:exon:25147;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84544774 | 84544933 | 84544774 | ID=Msa1131880-mRNA-1:exon:25148;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84546490 | 84546538 | 84546490 | ID=Msa1131880-mRNA-1:exon:25149;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84546708 | 84546821 | 84546708 | ID=Msa1131880-mRNA-1:exon:25150;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84546995 | 84547423 | 84546995 | ID=Msa1131880-mRNA-1:exon:25151;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84548071 | 84548457 | 84548071 | ID=Msa1131880-mRNA-1:exon:25152;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84548567 | 84548662 | 84548567 | ID=Msa1131880-mRNA-1:exon:25153;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84548749 | 84548864 | 84548749 | ID=Msa1131880-mRNA-1:exon:25154;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84548952 | 84549054 | 84548952 | ID=Msa1131880-mRNA-1:exon:25155;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84549182 | 84549258 | 84549182 | ID=Msa1131880-mRNA-1:exon:25156;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84549414 | 84549934 | 84549414 | ID=Msa1131880-mRNA-1:exon:25157;Parent=Msa1131880-mRNA-1 |
chr7_3 | exon | 84550032 | 84550342 | 84550032 | ID=Msa1131880-mRNA-1:exon:25158;Parent=Msa1131880-mRNA-1 |
chr7_3 | five_prime_UTR | 84542927 | 84543202 | 84542927 | ID=Msa1131880-mRNA-1:five_prime_utr;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84543203 | 84543707 | 84543203 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84544774 | 84544933 | 84544774 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84546490 | 84546538 | 84546490 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84546708 | 84546821 | 84546708 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84546995 | 84547423 | 84546995 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84548071 | 84548457 | 84548071 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84548567 | 84548662 | 84548567 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84548749 | 84548864 | 84548749 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84548952 | 84549054 | 84548952 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84549182 | 84549258 | 84549182 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84549414 | 84549934 | 84549414 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | CDS | 84550032 | 84550141 | 84550032 | ID=Msa1131880-mRNA-1:cds;Parent=Msa1131880-mRNA-1 |
chr7_3 | three_prime_UTR | 84550142 | 84550342 | 84550142 | ID=Msa1131880-mRNA-1:three_prime_utr;Parent=Msa1131880-mRNA-1 |
Gene Sequence |
Protein sequence |