AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026750 MtrunA17_Chr1g0182321 99.537 216 1 0 1 216 1 216 1.28e-161 444
Msa0026750 MtrunA17_Chr1g0182301 99.074 216 2 0 1 216 1 216 5.35e-161 443
Msa0026750 MtrunA17_Chr1g0212521 91.707 205 17 0 11 215 11 215 2.57e-141 393
Msa0026750 MtrunA17_Chr7g0263071 94.660 206 11 0 11 216 11 216 2.31e-140 391
Msa0026750 MtrunA17_Chr4g0030911 91.707 205 16 1 11 215 11 214 4.10e-140 390
Msa0026750 MtrunA17_Chr2g0327911 75.463 216 49 3 1 215 1 213 2.43e-115 327
Msa0026750 MtrunA17_Chr7g0250531 61.836 207 70 4 11 216 4 202 8.29e-87 255
Msa0026750 MtrunA17_Chr4g0055651 58.654 208 75 4 11 216 4 202 2.87e-85 251
Msa0026750 MtrunA17_Chr8g0335471 59.709 206 77 2 11 216 4 203 5.93e-84 248
Msa0026750 MtrunA17_Chr2g0276931 54.028 211 85 4 8 215 2 203 3.07e-79 236
Msa0026750 MtrunA17_Chr4g0032201 42.991 214 116 3 7 216 4 215 8.01e-60 187
Msa0026750 MtrunA17_Chr6g0458081 44.976 209 108 3 12 214 3 210 5.19e-59 184
Msa0026750 MtrunA17_Chr2g0290891 45.455 209 106 3 12 213 3 210 1.14e-58 184
Msa0026750 MtrunA17_Chr3g0112681 45.116 215 105 5 10 216 7 216 2.07e-58 183
Msa0026750 MtrunA17_Chr2g0283131 45.872 218 105 5 7 216 5 217 2.21e-57 181
Msa0026750 MtrunA17_Chr2g0276941 43.128 211 114 2 11 216 11 220 3.43e-57 180
Msa0026750 MtrunA17_Chr7g0265001 47.596 208 97 5 12 214 13 213 1.83e-56 178
Msa0026750 MtrunA17_Chr4g0046261 44.749 219 106 5 7 216 5 217 3.14e-56 177
Msa0026750 MtrunA17_Chr4g0040781 45.205 219 105 5 7 216 5 217 8.81e-56 176
Msa0026750 MtrunA17_Chr1g0189361 42.453 212 111 2 13 214 12 222 1.04e-55 176
Msa0026750 MtrunA17_Chr2g0315551 50.877 171 83 1 7 177 5 174 2.17e-55 176
Msa0026750 MtrunA17_Chr1g0180291 48.077 208 95 6 12 214 11 210 3.12e-55 175
Msa0026750 MtrunA17_Chr8g0349711 44.286 210 105 5 14 214 5 211 7.10e-55 174
Msa0026750 MtrunA17_Chr3g0123821 42.056 214 116 4 8 214 9 221 2.12e-54 173
Msa0026750 MtrunA17_Chr8g0381841 42.130 216 108 4 13 216 15 225 3.05e-54 173
Msa0026750 MtrunA17_Chr1g0159481 46.411 209 99 7 11 214 13 213 7.22e-54 171
Msa0026750 MtrunA17_Chr2g0319951 49.123 171 86 1 7 177 5 174 1.50e-53 171
Msa0026750 MtrunA17_Chr3g0130271 44.976 209 102 6 11 214 8 208 1.81e-53 170
Msa0026750 MtrunA17_Chr7g0234201 43.627 204 111 3 14 214 12 214 2.11e-53 170
Msa0026750 MtrunA17_Chr8g0349681 43.541 209 106 3 12 214 381 583 2.13e-52 177
Msa0026750 MtrunA17_Chr8g0349681 44.681 188 97 3 12 195 172 356 5.99e-48 165
Msa0026750 MtrunA17_Chr8g0349681 49.045 157 79 1 14 170 12 167 3.16e-46 160
Msa0026750 MtrunA17_Chr8g0384311 44.811 212 103 8 8 214 6 208 2.37e-52 167
Msa0026750 MtrunA17_Chr1g0197331 44.240 217 112 6 1 214 1 211 9.63e-52 166
Msa0026750 MtrunA17_Chr2g0325091 41.981 212 113 3 11 216 7 214 3.63e-51 165
Msa0026750 MtrunA17_Chr8g0346421 46.667 165 87 1 13 177 24 187 5.86e-51 165
Msa0026750 MtrunA17_Chr7g0275991 38.532 218 122 3 7 213 12 228 8.67e-51 164
Msa0026750 MtrunA17_Chr1g0174281 40.187 214 114 4 13 215 13 223 1.11e-50 164
Msa0026750 MtrunA17_Chr8g0351861 42.927 205 111 3 13 213 14 216 1.45e-50 164
Msa0026750 MtrunA17_Chr7g0214241 40.097 207 117 4 14 214 14 219 6.47e-50 162
Msa0026750 MtrunA17_Chr6g0482721 40.777 206 117 2 13 214 10 214 1.09e-49 161
Msa0026750 MtrunA17_Chr7g0231131 45.455 165 89 1 13 177 13 176 1.03e-47 156
Msa0026750 MtrunA17_Chr8g0392931 42.654 211 107 4 13 214 12 217 2.92e-46 152
Msa0026750 MtrunA17_Chr3g0109721 38.693 199 110 4 17 214 12 199 7.79e-46 150
Msa0026750 MtrunA17_Chr8g0390561 42.697 178 97 2 8 185 2 174 9.74e-46 150
Msa0026750 MtrunA17_Chr1g0199331 44.242 165 90 2 16 179 32 195 7.12e-45 148
Msa0026750 MtrunA17_Chr5g0433561 37.688 199 112 4 17 214 12 199 1.42e-44 147
Msa0026750 MtrunA17_Chr4g0034871 39.901 203 108 7 5 198 2 199 2.37e-41 139
Msa0026750 MtrunA17_Chr8g0382221 43.038 158 89 1 17 174 11 167 4.55e-41 139
Msa0026750 MtrunA17_Chr3g0123971 37.563 197 120 2 17 213 11 204 1.76e-39 134
Msa0026750 MtrunA17_Chr5g0400131 37.143 210 125 4 5 214 3 205 3.97e-39 134
Msa0026750 MtrunA17_Chr4g0055081 39.412 170 98 2 5 174 3 167 4.09e-38 131
Msa0026750 MtrunA17_Chr2g0331691 36.585 205 119 5 15 213 10 209 5.52e-37 128
Msa0026750 MtrunA17_Chr4g0004661 37.681 207 113 6 15 214 64 261 1.97e-36 128
Msa0026750 MtrunA17_Chr6g0466301 37.912 182 107 3 15 190 8 189 2.13e-36 126
Msa0026750 MtrunA17_Chr6g0465491 37.912 182 107 3 15 190 8 189 2.13e-36 126
Msa0026750 MtrunA17_Chr8g0383261 38.922 167 96 2 15 175 12 178 4.85e-36 125
Msa0026750 MtrunA17_Chr1g0201121 38.323 167 97 2 15 175 8 174 1.59e-34 122
Msa0026750 MtrunA17_Chr6g0466161 34.444 180 112 3 32 205 7 186 3.54e-27 103
Msa0026750 MtrunA17_Chr6g0465471 33.889 180 113 3 32 205 7 186 1.74e-26 101
Msa0026750 MtrunA17_Chr2g0325101 33.533 167 98 5 15 170 6 170 2.79e-26 100
Msa0026750 MtrunA17_Chr4g0037021 33.511 188 112 6 15 191 6 191 2.92e-26 100
Msa0026750 MtrunA17_Chr1g0178291 40.588 170 90 4 10 179 426 584 3.42e-25 102
Msa0026750 MtrunA17_Chr3g0117931 32.934 167 99 5 15 170 8 172 3.96e-25 97.8
Msa0026750 MtrunA17_Chr3g0138101 29.381 194 128 5 3 192 2 190 1.34e-24 96.7
Msa0026750 MtrunA17_Chr3g0138121 29.381 194 128 5 3 192 2 190 1.44e-24 96.7
Msa0026750 MtrunA17_Chr3g0138111 29.381 194 128 5 3 192 2 190 1.47e-24 96.7
Msa0026750 MtrunA17_Chr8g0371501 32.934 167 99 6 15 170 6 170 7.49e-24 94.0
Msa0026750 MtrunA17_Chr6g0486041 31.737 167 101 5 15 170 6 170 1.19e-23 94.0
Msa0026750 MtrunA17_Chr5g0405791 32.934 167 99 6 15 170 6 170 2.09e-23 92.8
Msa0026750 MtrunA17_Chr4g0046211 35.484 124 77 3 15 137 6 127 1.05e-22 89.7
Msa0026750 MtrunA17_Chr6g0466431 36.842 95 51 1 15 109 8 93 2.75e-17 74.3
Msa0026750 MtrunA17_Chr6g0465611 36.842 95 51 1 15 109 8 93 2.75e-17 74.3
Msa0026750 MtrunA17_Chr5g0443631 26.190 168 114 4 10 170 98 262 5.33e-13 66.6
Msa0026750 MtrunA17_Chr5g0434561 29.878 164 96 6 16 170 20 173 2.05e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026750 AT3G53610.2 90.291 206 20 0 11 216 11 216 3.75e-142 395
Msa0026750 AT3G53610.3 90.291 206 20 0 11 216 11 216 3.75e-142 395
Msa0026750 AT3G53610.1 90.291 206 20 0 11 216 11 216 3.75e-142 395
Msa0026750 AT5G59840.1 90.777 206 19 0 11 216 11 216 3.05e-141 393
Msa0026750 AT3G46060.2 89.806 206 21 0 11 216 11 216 1.46e-140 392
Msa0026750 AT3G46060.3 89.806 206 21 0 11 216 11 216 1.46e-140 392
Msa0026750 AT3G46060.1 89.806 206 21 0 11 216 11 216 1.46e-140 392
Msa0026750 AT5G03520.1 85.047 214 31 1 1 214 1 213 1.55e-128 361
Msa0026750 AT3G09900.1 84.651 215 32 1 1 214 1 215 4.92e-128 360
Msa0026750 AT5G03520.2 83.030 165 27 1 50 214 40 203 6.32e-101 291
Msa0026750 AT1G02130.1 59.809 209 72 4 11 216 4 203 2.70e-87 256
Msa0026750 AT4G17530.1 59.135 208 74 4 11 216 4 202 1.72e-83 247
Msa0026750 AT5G47200.1 59.135 208 74 4 11 216 4 202 4.13e-83 246
Msa0026750 AT3G11730.1 56.667 210 79 4 10 215 3 204 3.08e-80 238
Msa0026750 AT4G35860.1 47.619 210 103 3 12 215 3 211 5.41e-64 197
Msa0026750 AT4G17160.1 47.087 206 104 3 12 215 3 205 5.73e-63 195
Msa0026750 AT4G17170.1 46.667 210 105 4 12 215 3 211 2.52e-61 191
Msa0026750 AT1G09630.1 43.925 214 115 2 7 216 4 216 1.55e-60 189
Msa0026750 AT1G07410.1 42.523 214 116 3 7 216 4 214 3.23e-58 183
Msa0026750 AT4G18430.1 44.444 216 107 4 7 214 5 215 9.43e-58 182
Msa0026750 AT5G59150.1 49.123 171 86 1 7 177 4 173 2.38e-57 181
Msa0026750 AT1G16920.1 50.292 171 84 1 7 177 5 174 5.81e-57 180
Msa0026750 AT3G07410.1 44.928 207 108 3 13 214 10 215 1.01e-56 179
Msa0026750 AT4G39990.1 44.811 212 106 4 13 216 15 223 1.16e-56 179
Msa0026750 AT3G46830.1 42.791 215 117 3 7 216 4 217 1.16e-56 179
Msa0026750 AT3G46830.2 42.791 215 117 3 7 216 4 217 1.16e-56 179
Msa0026750 AT5G60860.1 44.651 215 112 4 7 216 5 217 2.07e-55 176
Msa0026750 AT2G43130.1 42.157 204 115 2 13 214 10 212 2.25e-55 176
Msa0026750 AT5G45750.1 43.662 213 112 4 7 214 5 214 2.64e-55 176
Msa0026750 AT3G15060.1 45.133 226 105 6 1 216 1 217 6.08e-55 175
Msa0026750 AT4G18800.1 44.076 211 112 3 7 214 5 212 3.12e-54 173
Msa0026750 AT2G33870.1 43.256 215 116 3 7 216 5 218 3.48e-54 173
Msa0026750 AT1G05810.1 42.857 210 112 4 13 216 10 217 4.93e-54 172
Msa0026750 AT5G47520.1 42.991 214 108 4 13 216 12 221 6.64e-54 172
Msa0026750 AT1G28550.1 43.779 217 112 4 7 216 5 218 9.88e-54 172
Msa0026750 AT1G05810.2 42.857 210 112 4 13 216 56 263 1.08e-53 173
Msa0026750 AT1G01200.1 46.328 177 95 0 13 189 26 202 2.38e-53 171
Msa0026750 AT5G65270.1 41.315 213 115 4 13 216 15 226 2.49e-53 171
Msa0026750 AT1G06400.1 47.977 173 89 1 7 179 5 176 8.26e-53 169
Msa0026750 AT2G31680.1 42.381 210 114 3 13 216 10 218 1.01e-52 169
Msa0026750 AT5G47960.1 41.706 211 115 3 13 216 13 222 1.26e-52 169
Msa0026750 AT5G03530.2 46.226 212 101 7 8 214 6 209 2.23e-52 168
Msa0026750 AT5G03530.1 46.226 212 101 7 8 214 6 209 2.23e-52 168
Msa0026750 AT1G73640.1 46.632 193 98 2 13 201 11 202 5.98e-52 167
Msa0026750 AT1G43890.3 50.898 167 78 4 6 170 4 168 1.01e-51 166
Msa0026750 AT1G43890.1 50.898 167 78 4 6 170 4 168 1.01e-51 166
Msa0026750 AT1G43890.2 50.898 167 78 4 6 170 4 168 1.01e-51 166
Msa0026750 AT1G18200.1 49.708 171 85 1 13 183 11 180 4.31e-51 165
Msa0026750 AT3G12160.1 41.627 209 115 3 13 215 13 220 4.50e-51 165
Msa0026750 AT3G54840.1 44.382 178 94 3 3 179 24 197 1.07e-47 155
Msa0026750 AT3G54840.2 46.154 169 86 3 3 170 24 188 3.69e-47 154
Msa0026750 AT3G54840.3 45.399 163 87 2 18 179 2 163 1.83e-46 151
Msa0026750 AT4G19640.1 38.693 199 112 4 17 215 12 200 2.65e-44 147
Msa0026750 AT4G35860.2 45.455 165 83 3 57 215 2 165 4.43e-44 145
Msa0026750 AT3G09910.5 45.946 185 96 4 8 190 6 188 7.63e-44 145
Msa0026750 AT3G09910.4 45.946 185 96 4 8 190 6 188 7.63e-44 145
Msa0026750 AT3G09910.3 47.701 174 87 4 8 179 6 177 1.09e-42 143
Msa0026750 AT3G09910.1 47.701 174 87 4 8 179 6 177 1.09e-42 143
Msa0026750 AT3G09910.2 47.701 174 87 4 8 179 6 177 1.09e-42 143
Msa0026750 AT3G18820.1 38.605 215 116 6 5 213 2 206 8.37e-42 140
Msa0026750 AT5G45130.1 36.181 199 117 4 17 215 12 200 1.52e-41 140
Msa0026750 AT4G39890.1 43.396 159 88 2 17 174 11 168 7.64e-41 139
Msa0026750 AT2G22290.1 37.879 198 120 2 17 214 11 205 1.10e-40 138
Msa0026750 AT5G45130.2 35.533 197 117 4 19 215 22 208 7.65e-40 136
Msa0026750 AT5G10260.1 37.688 199 121 3 17 215 11 206 5.30e-39 134
Msa0026750 AT1G49300.2 36.279 215 121 6 5 213 2 206 1.47e-38 132
Msa0026750 AT1G49300.1 36.279 215 121 6 5 213 2 206 1.47e-38 132
Msa0026750 AT2G44610.1 35.714 210 129 3 5 214 3 206 4.09e-38 131
Msa0026750 AT1G52280.1 38.049 205 115 5 15 213 8 206 7.23e-38 130
Msa0026750 AT5G59150.2 48.760 121 61 1 57 177 3 122 8.54e-38 129
Msa0026750 AT5G64990.1 37.563 197 122 1 17 213 9 204 1.03e-37 130
Msa0026750 AT4G09720.1 38.462 195 112 3 15 201 8 202 1.47e-37 130
Msa0026750 AT1G22740.1 38.071 197 114 4 15 205 8 202 2.82e-37 129
Msa0026750 AT3G16100.1 37.379 206 113 5 15 213 8 204 9.80e-37 128
Msa0026750 AT2G21880.1 36.538 208 110 4 15 205 9 211 2.72e-36 127
Msa0026750 AT4G09720.4 38.000 200 111 4 15 201 8 207 8.56e-36 125
Msa0026750 AT5G64990.2 36.275 204 122 2 17 213 9 211 7.10e-35 123
Msa0026750 AT4G09720.3 35.437 206 114 3 15 201 8 213 2.09e-34 122
Msa0026750 AT5G39620.1 38.462 169 92 3 16 175 6 171 6.99e-34 120
Msa0026750 AT4G19640.2 39.669 121 73 0 17 137 12 132 2.49e-30 109
Msa0026750 AT4G19640.3 39.669 121 73 0 17 137 12 132 1.25e-29 109
Msa0026750 AT4G09720.6 38.554 166 94 3 44 201 3 168 1.56e-28 105
Msa0026750 AT4G09720.5 38.554 166 94 3 44 201 3 168 1.56e-28 105
Msa0026750 AT4G09720.2 38.554 166 94 3 44 201 3 168 1.56e-28 105
Msa0026750 AT2G21880.4 36.066 183 95 4 40 205 9 186 2.53e-28 105
Msa0026750 AT2G21880.3 36.066 183 95 4 40 205 9 186 2.53e-28 105
Msa0026750 AT4G35020.1 36.527 167 93 6 15 170 6 170 1.76e-27 103
Msa0026750 AT4G35020.2 36.527 167 93 6 15 170 6 170 1.76e-27 103
Msa0026750 AT4G35020.3 36.527 167 93 6 15 170 6 170 1.76e-27 103
Msa0026750 AT2G44690.1 33.533 167 98 5 15 170 18 182 1.12e-26 102
Msa0026750 AT2G21880.2 32.692 208 110 5 15 205 9 203 1.68e-26 101
Msa0026750 AT3G48040.1 33.533 167 98 5 15 170 8 172 3.45e-26 100
Msa0026750 AT5G62880.1 32.402 179 108 5 15 182 8 184 9.69e-26 99.8
Msa0026750 AT5G45970.1 31.737 167 101 5 15 170 6 170 9.93e-26 99.4
Msa0026750 AT3G51300.1 32.934 167 99 6 15 170 6 170 3.30e-25 97.8
Msa0026750 AT1G20090.1 34.731 167 96 6 15 170 5 169 3.39e-25 97.8
Msa0026750 AT5G55190.1 29.439 214 139 6 3 209 2 210 4.30e-25 98.2
Msa0026750 AT1G75840.1 34.132 167 97 6 15 170 6 170 4.82e-25 97.4
Msa0026750 AT5G55080.1 32.716 162 105 3 16 177 14 171 5.78e-25 98.2
Msa0026750 AT5G20010.1 28.505 214 143 6 3 212 2 209 1.05e-24 97.4
Msa0026750 AT2G17800.2 33.533 167 98 6 15 170 6 170 1.57e-24 96.3
Msa0026750 AT2G17800.1 33.533 167 98 6 15 170 6 170 1.57e-24 96.3
Msa0026750 AT5G20020.1 29.381 194 128 5 3 192 2 190 3.66e-24 95.9
Msa0026750 AT4G28950.1 32.121 165 101 5 15 170 6 168 3.94e-24 95.5
Msa0026750 AT4G35950.1 32.934 167 99 6 15 170 6 170 1.29e-23 94.0
Msa0026750 AT3G48040.2 32.704 159 94 5 15 162 8 164 2.41e-23 92.8
Msa0026750 AT5G62880.2 32.317 164 98 5 15 167 8 169 1.98e-22 90.5
Msa0026750 AT4G35020.4 37.069 116 70 3 15 129 6 119 2.96e-19 80.9
Msa0026750 AT4G35020.5 37.069 116 70 3 15 129 6 119 2.96e-19 80.9
Msa0026750 AT5G46025.1 35.294 102 64 2 77 177 6 106 8.69e-16 70.9
Msa0026750 AT3G51290.2 31.884 138 81 6 44 170 636 771 6.52e-14 70.5
Msa0026750 AT5G37680.1 27.439 164 100 5 16 170 20 173 1.27e-11 61.6
Msa0026750 AT2G15310.1 27.338 139 89 6 16 153 18 145 3.52e-11 60.8
Msa0026750 AT3G49870.2 28.571 168 113 4 16 180 1 164 5.22e-11 59.7
Msa0026750 AT5G67560.1 31.098 164 94 6 16 170 20 173 6.21e-11 59.7

Find 79 sgRNAs with CRISPR-Local

Find 556 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCACATATCTATTTAT+TGG 0.174895 1_1:+50788273 Msa0026750:three_prime_UTR
AGCGAATCAAATTGCAAATA+TGG 0.187496 1_1:+50785951 Msa0026750:CDS
CATCGTGGATCAATCATATT+AGG 0.248360 1_1:+50783682 Msa0026750:five_prime_UTR
TGCTACTTATTGGGTGTTAA+TGG 0.249211 1_1:+50788222 Msa0026750:three_prime_UTR
TTAGCATTGATTTCAAAATA+AGG 0.283837 1_1:+50785909 Msa0026750:intron
GTTGGTTAATCTTGAGTGTC+TGG 0.301047 1_1:-50788049 None:intergenic
GTCGAGATCTGAAAAGAAAA+TGG 0.305874 1_1:-50783500 None:intergenic
TACGAAGCTAAGCAATATAT+TGG 0.317137 1_1:-50788401 None:intergenic
CATCTGAGAAACGCAGTAAA+AGG 0.343014 1_1:-50785741 None:intergenic
TTTATACATTTGATGTTTCT+CGG 0.343324 1_1:+50788435 Msa0026750:three_prime_UTR
ATACTTCTCAAAACGCTGTT+AGG 0.349385 1_1:+50788582 Msa0026750:three_prime_UTR
CCCAATGGTTGTAATAAAAC+TGG 0.357327 1_1:-50785776 None:intergenic
TAATCGGATCGAGCTCTTGC+AGG 0.360612 1_1:-50783733 None:intergenic
TTTGAGCGAGGAAGTTAGTT+TGG 0.369946 1_1:+50788151 Msa0026750:three_prime_UTR
TCGCTTACCATCAAGCTCTA+TGG 0.377596 1_1:-50785933 None:intergenic
AAGAAATGACATGGCAGAAT+TGG 0.388055 1_1:-50788558 None:intergenic
GACTAGATCCTTCCTATGTT+GGG 0.407640 1_1:+50788247 Msa0026750:three_prime_UTR
AAAAGAAAATGGAGATTGAT+TGG 0.415782 1_1:-50783489 None:intergenic
TTGGTTAATCTTGAGTGTCT+GGG 0.416091 1_1:-50788048 None:intergenic
AGCAAACATTGTGTATAGTC+AGG 0.416706 1_1:-50788345 None:intergenic
AACAACATCCTTCGCCTACT+TGG 0.417142 1_1:+50788374 Msa0026750:three_prime_UTR
CATATCCAGACATCAAGAAT+TGG 0.417945 1_1:+50787353 Msa0026750:intron
GATGAAGAGTTTGTTGTTGT+TGG 0.419396 1_1:-50783467 None:intergenic
CGGTTTCGAACCATTACAAC+TGG 0.420732 1_1:+50785992 Msa0026750:CDS
CTTGATTAGGTAATCGTAAT+CGG 0.424837 1_1:-50783749 None:intergenic
GCGAATCAAATTGCAAATAT+GGG 0.428892 1_1:+50785952 Msa0026750:CDS
ACGATGGTTGCTATAGTAGA+AGG 0.431056 1_1:-50783665 None:intergenic
TTGCTATAGTAGAAGGAGAT+AGG 0.439386 1_1:-50783658 None:intergenic
AGACTAGATCCTTCCTATGT+TGG 0.447576 1_1:+50788246 Msa0026750:three_prime_UTR
CTGACATGGATGAAAGCAAA+AGG 0.447905 1_1:+50787437 Msa0026750:CDS
CGATGAGGAGAAGCTTGATT+AGG 0.449067 1_1:-50783762 None:intergenic
GAAGTGAATGAAAATGAAAA+TGG 0.450221 1_1:-50783537 None:intergenic
GCAGAGCCAACTCCCTGGTC+TGG 0.454797 1_1:-50788071 None:intergenic
GCTTATTACCGTGGAGCAAT+GGG 0.460469 1_1:+50787068 Msa0026750:intron
TGGAAAGAAAGAGTGGAGAG+TGG 0.477663 1_1:-50783583 None:intergenic
CAAGCTCTTGCAGACGAATA+CGG 0.478803 1_1:+50787587 Msa0026750:CDS
GGAAAGAAAGAGTGGAGAGT+GGG 0.481492 1_1:-50783582 None:intergenic
CAATGTCAACAAAATATTAG+TGG 0.483464 1_1:+50787405 Msa0026750:CDS
ATAAGGACCATAGAGCTTGA+TGG 0.484066 1_1:+50785926 Msa0026750:CDS
AATGTCAACAAAATATTAGT+GGG 0.485156 1_1:+50787406 Msa0026750:CDS
AGCTTATTACCGTGGAGCAA+TGG 0.491934 1_1:+50787067 Msa0026750:intron
AGAGCTTGACCCTTTGAAGT+TGG 0.495684 1_1:-50787572 None:intergenic
TTAGGCTGTTCCAACTTCAA+AGG 0.500392 1_1:+50787562 Msa0026750:intron
CTGAAACTAACCAGTTGTAA+TGG 0.502216 1_1:-50786002 None:intergenic
TAGGCTGTTCCAACTTCAAA+GGG 0.502333 1_1:+50787563 Msa0026750:intron
ATTAATTTCCCAACATAGGA+AGG 0.502549 1_1:-50788255 None:intergenic
AGCCAACTCCCTGGTCTGGT+TGG 0.504165 1_1:-50788067 None:intergenic
CAAGATTAACCAACCAGACC+AGG 0.511143 1_1:+50788058 Msa0026750:CDS
CAAAATATTAGTGGGGAACA+AGG 0.513217 1_1:+50787414 Msa0026750:CDS
TGTGATTAATTTCCCAACAT+AGG 0.513404 1_1:-50788259 None:intergenic
AACTAATATGAATGTGGAGG+AGG 0.516237 1_1:+50787725 Msa0026750:CDS
AAGTAGGCGAAGGATGTTGT+TGG 0.533254 1_1:-50788372 None:intergenic
GAAAGAAAGAGTGGAGAGTG+GGG 0.557172 1_1:-50783581 None:intergenic
AATATATTGGAGCACCAAGT+AGG 0.564792 1_1:-50788388 None:intergenic
CTAATCAAGCTTCTCCTCAT+CGG 0.565419 1_1:+50783763 Msa0026750:CDS
AGTGGGGAACAAGGCTGACA+TGG 0.573301 1_1:+50787423 Msa0026750:CDS
CTTGAGCAGAGCCAACTCCC+TGG 0.575603 1_1:-50788076 None:intergenic
AACCAACCAGACCAGGGAGT+TGG 0.575720 1_1:+50788065 Msa0026750:CDS
TTGCAAATATGGGACACGGC+TGG 0.578666 1_1:+50785962 Msa0026750:CDS
TGACATGGATGAAAGCAAAA+GGG 0.589594 1_1:+50787438 Msa0026750:CDS
TCACAAACGTCTTCTTGCTG+TGG 0.593063 1_1:+50788101 Msa0026750:CDS
GTGAATGAAAATGAAAATGG+TGG 0.593989 1_1:-50783534 None:intergenic
TGGTTAATCTTGAGTGTCTG+GGG 0.601058 1_1:-50788047 None:intergenic
CTTCTCCTCATCGGTGATAG+CGG 0.601359 1_1:+50783772 Msa0026750:CDS
CAAATTGCAAATATGGGACA+CGG 0.602217 1_1:+50785958 Msa0026750:CDS
TGTTGGGCAGCTTATTACCG+TGG 0.603610 1_1:+50787059 Msa0026750:intron
TCGGATCGAGCTCTTGCAGG+TGG 0.611640 1_1:-50783730 None:intergenic
GCAAAATACCCATTGCTCCA+CGG 0.620774 1_1:-50787076 None:intergenic
ACTGTTAAAAGATGACTCAT+CGG 0.623062 1_1:-50787114 None:intergenic
TTGGAGCACCAAGTAGGCGA+AGG 0.626763 1_1:-50788382 None:intergenic
CTTGCAACTACATTTGAGCG+AGG 0.672775 1_1:+50788139 Msa0026750:three_prime_UTR
GGGACACGGCTGGTCAAGAG+CGG 0.673808 1_1:+50785972 Msa0026750:CDS
AAGATTAACCAACCAGACCA+GGG 0.675765 1_1:+50788059 Msa0026750:CDS
ATGTCAACAAAATATTAGTG+GGG 0.680013 1_1:+50787407 Msa0026750:CDS
AGAAGTATGAAGAAATGACA+TGG 0.684488 1_1:-50788567 None:intergenic
AGAAAGCGACTCAAAGACTG+AGG 0.689584 1_1:+50787788 Msa0026750:CDS
CTAATATGATTGATCCACGA+TGG 0.690061 1_1:-50783681 None:intergenic
TTCTACTATAGCAACCATCG+TGG 0.713720 1_1:+50783667 Msa0026750:five_prime_UTR
ACGAACCGCTATCACCGATG+AGG 0.719307 1_1:-50783777 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATAATAAAATTAAA+CGG + chr1_1:50784102-50784121 Msa0026750:intron 0.0%
!! ATATTATATTATTTAATTAA+GGG - chr1_1:50789866-50789885 None:intergenic 0.0%
!! AATATTATATTATTTAATTA+AGG - chr1_1:50789867-50789886 None:intergenic 0.0%
!!! TTAAGTTAATTTGATTTTAT+TGG - chr1_1:50783606-50783625 None:intergenic 10.0%
!! TTAATTAAGACAAAATTTAA+GGG - chr1_1:50783634-50783653 None:intergenic 10.0%
!! TTTAATTAAGACAAAATTTA+AGG - chr1_1:50783635-50783654 None:intergenic 10.0%
!!! ATATTTACTACTATTTTTTT+TGG + chr1_1:50788472-50788491 Msa0026750:intron 10.0%
!!! ATCTTAGTTATTTTTAAATT+TGG + chr1_1:50788520-50788539 Msa0026750:three_prime_UTR 10.0%
!!! AACATATTATTTTTGTTTAA+GGG - chr1_1:50788779-50788798 None:intergenic 10.0%
!!! AAACATATTATTTTTGTTTA+AGG - chr1_1:50788780-50788799 None:intergenic 10.0%
!!! AAGAATATTTTCTTATATAT+AGG + chr1_1:50789077-50789096 Msa0026750:intron 10.0%
!!! GTATATATCATTTTTATAAA+AGG - chr1_1:50789554-50789573 None:intergenic 10.0%
!!! TTTCATTTTTATAGTATTAA+CGG - chr1_1:50790403-50790422 None:intergenic 10.0%
!! TTAATACTATAAAAATGAAA+AGG + chr1_1:50790403-50790422 Msa0026750:intron 10.0%
!! TTCAATAAAAAAATAGAAAA+TGG + chr1_1:50790973-50790992 Msa0026750:intron 10.0%
!! TAATTAAGACAAAATTTAAG+GGG - chr1_1:50783633-50783652 None:intergenic 15.0%
!!! AAAATAAATAGTGGAAATAA+GGG + chr1_1:50784977-50784996 Msa0026750:intron 15.0%
!!! AATAAGTTGAAAACAAATTA+TGG + chr1_1:50785519-50785538 Msa0026750:intron 15.0%
!!! ATAAGTTGAAAACAAATTAT+GGG + chr1_1:50785520-50785539 Msa0026750:intron 15.0%
!! CTTCTAATAAATAAGATTAA+GGG + chr1_1:50786178-50786197 Msa0026750:intron 15.0%
!! TTCTAATAAATAAGATTAAG+GGG + chr1_1:50786179-50786198 Msa0026750:intron 15.0%
!! TTAAATAAATAAAACTGGTT+CGG - chr1_1:50786449-50786468 None:intergenic 15.0%
!!! ACCAGTTTTATTTATTTAAT+TGG + chr1_1:50786450-50786469 Msa0026750:intron 15.0%
!! TCCAATTAAATAAATAAAAC+TGG - chr1_1:50786454-50786473 None:intergenic 15.0%
!! AATATTTGACAGATAAATTA+AGG - chr1_1:50786764-50786783 None:intergenic 15.0%
!!! CTTTTAAAATTTTAAAAAGG+CGG + chr1_1:50786786-50786805 Msa0026750:intron 15.0%
!! TTAATCACATATCTATTTAT+TGG + chr1_1:50788273-50788292 Msa0026750:three_prime_UTR 15.0%
!!! TAGTTATTTTTAAATTTGGT+CGG + chr1_1:50788524-50788543 Msa0026750:three_prime_UTR 15.0%
!!! AAGAATCTTTTCTTATATAT+AGG - chr1_1:50788977-50788996 None:intergenic 15.0%
!! AAATGAGTAAAGATAAAAAT+AGG + chr1_1:50789142-50789161 Msa0026750:intron 15.0%
!! AATGAGTAAAGATAAAAATA+GGG + chr1_1:50789143-50789162 Msa0026750:intron 15.0%
!! AAATAAGAAGAAATATGAAA+AGG + chr1_1:50790451-50790470 Msa0026750:intron 15.0%
!!! CAATTTCTTTTCATTTTTAA+TGG - chr1_1:50790597-50790616 None:intergenic 15.0%
!!! AAAAAAATGTTTTAGTATTG+TGG + chr1_1:50790654-50790673 Msa0026750:intron 15.0%
!! ATTCTGCTTAATATTTCATT+AGG + chr1_1:50783839-50783858 Msa0026750:intron 20.0%
!!! TTAGGTTTTATTATTTTCAG+CGG + chr1_1:50783857-50783876 Msa0026750:intron 20.0%
!! TACAAGTTTACTATAACAAA+TGG + chr1_1:50783906-50783925 Msa0026750:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - chr1_1:50784044-50784063 None:intergenic 20.0%
!!! AAAATCAACTTATGACTTTT+TGG + chr1_1:50784614-50784633 Msa0026750:intron 20.0%
!! AAACATTCAAATTGAACAAA+TGG - chr1_1:50784943-50784962 None:intergenic 20.0%
!!! CAAAATAAATAGTGGAAATA+AGG + chr1_1:50784976-50784995 Msa0026750:intron 20.0%
!! ATACATTAATAATACTGAAG+TGG - chr1_1:50785646-50785665 None:intergenic 20.0%
!! ACTTCAGTATTATTAATGTA+TGG + chr1_1:50785645-50785664 Msa0026750:intron 20.0%
!!! ATTACATTCTTTTTTCACAT+TGG + chr1_1:50785699-50785718 Msa0026750:intron 20.0%
!!! TTAGCATTGATTTCAAAATA+AGG + chr1_1:50785909-50785928 Msa0026750:intron 20.0%
!!! TTATTCTAGTTATATTGGAA+GGG - chr1_1:50786058-50786077 None:intergenic 20.0%
!!! ATTATTCTAGTTATATTGGA+AGG - chr1_1:50786059-50786078 None:intergenic 20.0%
!!! GCTTATTATTCTAGTTATAT+TGG - chr1_1:50786063-50786082 None:intergenic 20.0%
!!! CCTTAATCTTATTTATTAGA+AGG - chr1_1:50786180-50786199 None:intergenic 20.0%
!! CCTTCTAATAAATAAGATTA+AGG + chr1_1:50786177-50786196 Msa0026750:intron 20.0%
!!! TTGTTTTAGTTCTCATAAAA+AGG + chr1_1:50786321-50786340 Msa0026750:intron 20.0%
!!! ATGTGTTTAATCTTTTTGTT+GGG + chr1_1:50787043-50787062 Msa0026750:intron 20.0%
!!! TACTTTTCAACTTTGTATTT+TGG + chr1_1:50787270-50787289 Msa0026750:intron 20.0%
!!! ACTTTTCAACTTTGTATTTT+GGG + chr1_1:50787271-50787290 Msa0026750:intron 20.0%
!! AATGTCAACAAAATATTAGT+GGG + chr1_1:50787406-50787425 Msa0026750:CDS 20.0%
!! TTTAGTGGAAAAATAAAATG+TGG + chr1_1:50788859-50788878 Msa0026750:intron 20.0%
!! AAAAAAAAAAAAGTTAGCGT+TGG + chr1_1:50788925-50788944 Msa0026750:intron 20.0%
!!! TATTTTCTTATATATAGGAC+CGG + chr1_1:50789082-50789101 Msa0026750:intron 20.0%
!! ATGAGTAAAGATAAAAATAG+GGG + chr1_1:50789144-50789163 Msa0026750:intron 20.0%
!!! ACTGTGAAATAATTTGTTAT+TGG - chr1_1:50789634-50789653 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr1_1:50789791-50789810 Msa0026750:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr1_1:50789792-50789811 Msa0026750:intron 20.0%
!!! AAACATTTTTAAAAAGTCAG+AGG + chr1_1:50790167-50790186 Msa0026750:intron 20.0%
!!! AACATTTTTAAAAAGTCAGA+GGG + chr1_1:50790168-50790187 Msa0026750:intron 20.0%
!! ATAATATATGAGAAACAAAG+AGG + chr1_1:50790265-50790284 Msa0026750:intron 20.0%
!! ATAAATACTGTCATCAATAA+AGG + chr1_1:50790569-50790588 Msa0026750:intron 20.0%
!! AAAGAAATTGTTATGAGAAA+AGG + chr1_1:50790607-50790626 Msa0026750:intron 20.0%
!!! ATGAAAAAAAAGGTTTTTCA+AGG - chr1_1:50790775-50790794 None:intergenic 20.0%
!!! TTGATTTGCCATTTTTTTTT+AGG + chr1_1:50790940-50790959 Msa0026750:intron 20.0%
!! TAAAAAAATAGAAAATGGCA+AGG + chr1_1:50790978-50790997 Msa0026750:intron 20.0%
! AAAAGAAAATGGAGATTGAT+TGG - chr1_1:50783492-50783511 None:intergenic 25.0%
! GAAGTGAATGAAAATGAAAA+TGG - chr1_1:50783540-50783559 None:intergenic 25.0%
!! ATTTTATTGGAAAGAAAGAG+TGG - chr1_1:50783593-50783612 None:intergenic 25.0%
! AAGTTTACTATAACAAATGG+AGG + chr1_1:50783909-50783928 Msa0026750:intron 25.0%
! TTTGGCAATGATAAAGTAAA+AGG + chr1_1:50783944-50783963 Msa0026750:intron 25.0%
! TTGGCAATGATAAAGTAAAA+GGG + chr1_1:50783945-50783964 Msa0026750:intron 25.0%
! TTAATCAAATGTGACCTATT+TGG + chr1_1:50784027-50784046 Msa0026750:intron 25.0%
! AACGGCTTTCATATAAAATA+AGG + chr1_1:50784120-50784139 Msa0026750:intron 25.0%
! TCATATAAAATAAGGTGGTT+TGG + chr1_1:50784128-50784147 Msa0026750:intron 25.0%
! CATATAAAATAAGGTGGTTT+GGG + chr1_1:50784129-50784148 Msa0026750:intron 25.0%
! ATATAAAATAAGGTGGTTTG+GGG + chr1_1:50784130-50784149 Msa0026750:intron 25.0%
! ATTGATGTTGTTGAATGATT+TGG + chr1_1:50784528-50784547 Msa0026750:intron 25.0%
! CAACATAACAATGAAGAAAA+AGG - chr1_1:50784859-50784878 None:intergenic 25.0%
! TCAAATTGAACAAATGGTTT+GGG - chr1_1:50784937-50784956 None:intergenic 25.0%
! TTCAAATTGAACAAATGGTT+TGG - chr1_1:50784938-50784957 None:intergenic 25.0%
! GTTCAATTTGAATGTTTGAT+AGG + chr1_1:50784946-50784965 Msa0026750:intron 25.0%
! GATGTTCTCAAAATAAATAG+TGG + chr1_1:50784968-50784987 Msa0026750:intron 25.0%
!! TGATGTTTTTCCTCTTTTTT+TGG + chr1_1:50785245-50785264 Msa0026750:intron 25.0%
!! AACAAATTTTATAACGCAGA+CGG - chr1_1:50785438-50785457 None:intergenic 25.0%
!! TGTTTTCATATATCTACCTT+GGG + chr1_1:50785494-50785513 Msa0026750:intron 25.0%
!! ATAATTTTTGTGAGAGCTTA+TGG - chr1_1:50785562-50785581 None:intergenic 25.0%
! ATGTATGGAATGTATCTTAT+TGG + chr1_1:50785660-50785679 Msa0026750:intron 25.0%
! TGTATGGAATGTATCTTATT+GGG + chr1_1:50785661-50785680 Msa0026750:intron 25.0%
!! TTCTTTTGTCTCTTTCTTTA+GGG + chr1_1:50785850-50785869 Msa0026750:intron 25.0%
!!! TAACACATTTTAGTAAGTAC+AGG - chr1_1:50785882-50785901 None:intergenic 25.0%
! TTAAGGGGAATCATTTATAA+TGG + chr1_1:50786194-50786213 Msa0026750:intron 25.0%
!!! TGTCTTATCATTTTTTTGTG+AGG - chr1_1:50786298-50786317 None:intergenic 25.0%
! TTTAATTGGACAACGTTAAA+AGG + chr1_1:50786464-50786483 Msa0026750:intron 25.0%
!!! CATGATTAATTTGATGATGA+AGG - chr1_1:50786587-50786606 None:intergenic 25.0%
! CTTCATCATCAAATTAATCA+TGG + chr1_1:50786585-50786604 Msa0026750:intron 25.0%
!! TACTCTTTATTCATGTTTTG+AGG - chr1_1:50786658-50786677 None:intergenic 25.0%
!!! TTAAAATTTTAAAAAGGCGG+AGG + chr1_1:50786789-50786808 Msa0026750:intron 25.0%
!!! TAAAATTTTAAAAAGGCGGA+GGG + chr1_1:50786790-50786809 Msa0026750:intron 25.0%
!!! TTAGAGTATCATAGCTTTTT+AGG + chr1_1:50786890-50786909 Msa0026750:intron 25.0%
! TAGTGTATTTGAATTAGTGA+TGG - chr1_1:50787003-50787022 None:intergenic 25.0%
!! GATGTGTTTAATCTTTTTGT+TGG + chr1_1:50787042-50787061 Msa0026750:intron 25.0%
! ATTGTAGAAGATTAAGAATG+TGG - chr1_1:50787195-50787214 None:intergenic 25.0%
!! CTTTTCAACTTTGTATTTTG+GGG + chr1_1:50787272-50787291 Msa0026750:intron 25.0%
! TGCTTAAATGTGTATTAAGA+TGG + chr1_1:50787304-50787323 Msa0026750:intron 25.0%
! CAATGTCAACAAAATATTAG+TGG + chr1_1:50787405-50787424 Msa0026750:CDS 25.0%
! ATGTCAACAAAATATTAGTG+GGG + chr1_1:50787407-50787426 Msa0026750:CDS 25.0%
!!! TTTTTAGTTGTTACTCTTGT+TGG + chr1_1:50787640-50787659 Msa0026750:intron 25.0%
! TGCAAAAACTAATATGAATG+TGG + chr1_1:50787719-50787738 Msa0026750:CDS 25.0%
! AAAAACTAATATGAATGTGG+AGG + chr1_1:50787722-50787741 Msa0026750:CDS 25.0%
!!! ACCTTTCTTTTGTTATATGA+TGG + chr1_1:50787822-50787841 Msa0026750:intron 25.0%
! TCCATCATATAACAAAAGAA+AGG - chr1_1:50787826-50787845 None:intergenic 25.0%
!!! ATATGATGGATTCATTATCT+TGG + chr1_1:50787836-50787855 Msa0026750:intron 25.0%
!! CTTCACACTAAATTTTCATT+TGG + chr1_1:50788014-50788033 Msa0026750:intron 25.0%
!!! ATTTTACAGTTGCTACTTAT+TGG + chr1_1:50788212-50788231 Msa0026750:three_prime_UTR 25.0%
!!! TTTTACAGTTGCTACTTATT+GGG + chr1_1:50788213-50788232 Msa0026750:three_prime_UTR 25.0%
!! ATTTTCCCTTTTCTTTTTTC+AGG + chr1_1:50788320-50788339 Msa0026750:three_prime_UTR 25.0%
!! TTTTTAAATTTGGTCGGTAT+AGG + chr1_1:50788530-50788549 Msa0026750:three_prime_UTR 25.0%
!!! CTAATTGTCAATAGTTTTAG+TGG + chr1_1:50788844-50788863 Msa0026750:intron 25.0%
!! TCTTTTCTTATATATAGGAC+CGG - chr1_1:50788972-50788991 None:intergenic 25.0%
!! AGGAAAGAAAGAATTTTTGT+GGG - chr1_1:50789251-50789270 None:intergenic 25.0%
!! AAGGAAAGAAAGAATTTTTG+TGG - chr1_1:50789252-50789271 None:intergenic 25.0%
! GTTAAAGGAAAGAAAATATG+AGG + chr1_1:50789422-50789441 Msa0026750:intron 25.0%
! TGCTGATGGAAAAATTTATA+GGG - chr1_1:50789695-50789714 None:intergenic 25.0%
!!! AAAACTGTTGATGGAAATTT+TGG - chr1_1:50789732-50789751 None:intergenic 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr1_1:50789758-50789777 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr1_1:50789759-50789778 None:intergenic 25.0%
!! TAGAGTCTAGTTTATCTAAT+AGG - chr1_1:50789902-50789921 None:intergenic 25.0%
! TCTTACCAAATAATATTACC+AGG + chr1_1:50790055-50790074 Msa0026750:intron 25.0%
!! AAGGAAAATGAACTTTTATG+TGG + chr1_1:50790422-50790441 Msa0026750:intron 25.0%
!! GTATTGTGGTATATCAATTT+TGG + chr1_1:50790668-50790687 Msa0026750:intron 25.0%
!!! TTGCCATTTTTTTTTAGGTA+CGG + chr1_1:50790945-50790964 Msa0026750:intron 25.0%
!!! AAGGAAAGATTGTTTTTTGT+GGG - chr1_1:50791073-50791092 None:intergenic 25.0%
!!! TTTTGAAATTTGTGATTCCA+TGG - chr1_1:50791119-50791138 None:intergenic 25.0%
GTGAATGAAAATGAAAATGG+TGG - chr1_1:50783537-50783556 None:intergenic 30.0%
! AGGTTTTTGAATAATCACGA+TGG + chr1_1:50783702-50783721 Msa0026750:exon 30.0%
CTTGATTAGGTAATCGTAAT+CGG - chr1_1:50783752-50783771 None:intergenic 30.0%
GGCTTTCATATAAAATAAGG+TGG + chr1_1:50784123-50784142 Msa0026750:intron 30.0%
! TATAAAATAAGGTGGTTTGG+GGG + chr1_1:50784131-50784150 Msa0026750:intron 30.0%
TCCTTGTCAAAAAGTTTGAT+CGG + chr1_1:50784241-50784260 Msa0026750:intron 30.0%
! TTTAACTTCATTGGAGGATT+CGG + chr1_1:50784308-50784327 Msa0026750:intron 30.0%
AGTGAGGTTTATGTTAGAAA+TGG + chr1_1:50784433-50784452 Msa0026750:intron 30.0%
GTGAGGTTTATGTTAGAAAT+GGG + chr1_1:50784434-50784453 Msa0026750:intron 30.0%
TGAGGTTTATGTTAGAAATG+GGG + chr1_1:50784435-50784454 Msa0026750:intron 30.0%
! ATCAACTTATGACTTTTTGG+AGG + chr1_1:50784617-50784636 Msa0026750:intron 30.0%
! TCAACTTATGACTTTTTGGA+GGG + chr1_1:50784618-50784637 Msa0026750:intron 30.0%
TTTGTGTTGGAAAATGATGT+AGG + chr1_1:50784645-50784664 Msa0026750:intron 30.0%
ATGTAGGTGAATTGGAAAAA+GGG + chr1_1:50784661-50784680 Msa0026750:intron 30.0%
! TCCAGAATAATTTGTGGAAA+AGG + chr1_1:50784765-50784784 Msa0026750:intron 30.0%
CATAACAATGAAGAAAAAGG+TGG - chr1_1:50784856-50784875 None:intergenic 30.0%
!!! GATAAGATTTTGAGATGGAT+AGG + chr1_1:50784893-50784912 Msa0026750:intron 30.0%
! AAATTGAACAAATGGTTTGG+GGG - chr1_1:50784935-50784954 None:intergenic 30.0%
CAAATTGAACAAATGGTTTG+GGG - chr1_1:50784936-50784955 None:intergenic 30.0%
!! AATAGTGGAAATAAGGGTTT+TGG + chr1_1:50784983-50785002 Msa0026750:intron 30.0%
!!! AAATAAGGGTTTTGGCTTAT+AGG + chr1_1:50784991-50785010 Msa0026750:intron 30.0%
!!! AATAAGGGTTTTGGCTTATA+GGG + chr1_1:50784992-50785011 Msa0026750:intron 30.0%
! AAGTAATCAAAGTGCTCTTA+TGG + chr1_1:50785026-50785045 Msa0026750:intron 30.0%
TTCCATTCATAGAACATACA+TGG - chr1_1:50785082-50785101 None:intergenic 30.0%
GTATGTTCTATGAATGGAAA+TGG + chr1_1:50785083-50785102 Msa0026750:intron 30.0%
TATGAATGGAAATGGTGTAT+GGG + chr1_1:50785091-50785110 Msa0026750:intron 30.0%
!!! TGTTTTTCCTCTTTTTTTGG+AGG + chr1_1:50785248-50785267 Msa0026750:intron 30.0%
!!! GTTTTTCCTCTTTTTTTGGA+GGG + chr1_1:50785249-50785268 Msa0026750:intron 30.0%
!!! TTTTTCCTCTTTTTTTGGAG+GGG + chr1_1:50785250-50785269 Msa0026750:intron 30.0%
! CTGTTTTCATATATCTACCT+TGG + chr1_1:50785493-50785512 Msa0026750:intron 30.0%
! GTTTTCATATATCTACCTTG+GGG + chr1_1:50785495-50785514 Msa0026750:intron 30.0%
!!! ACCAGTTTTATTACAACCAT+TGG + chr1_1:50785775-50785794 Msa0026750:CDS 30.0%
!!! CCAGTTTTATTACAACCATT+GGG + chr1_1:50785776-50785795 Msa0026750:CDS 30.0%
! TTTTATTACAACCATTGGGT+AGG + chr1_1:50785780-50785799 Msa0026750:intron 30.0%
! CTTCTTTTGTCTCTTTCTTT+AGG + chr1_1:50785849-50785868 Msa0026750:intron 30.0%
! TCTTTTGTCTCTTTCTTTAG+GGG + chr1_1:50785851-50785870 Msa0026750:intron 30.0%
AGCGAATCAAATTGCAAATA+TGG + chr1_1:50785951-50785970 Msa0026750:CDS 30.0%
GCGAATCAAATTGCAAATAT+GGG + chr1_1:50785952-50785971 Msa0026750:CDS 30.0%
AGAAGGAGCAATAAATAAGT+AGG - chr1_1:50786163-50786182 None:intergenic 30.0%
TTTGTGAGGATCATTATCAT+AGG - chr1_1:50786284-50786303 None:intergenic 30.0%
!! CTGTTTTGGATGATGATAAT+GGG - chr1_1:50786522-50786541 None:intergenic 30.0%
!! ATTTAGAAGCTATGCTGTTT+TGG - chr1_1:50786536-50786555 None:intergenic 30.0%
AATTTGCCAATTCAAGAAGT+TGG + chr1_1:50786558-50786577 Msa0026750:intron 30.0%
!!! GTTTTGAGGATATGAAAAGA+GGG - chr1_1:50786644-50786663 None:intergenic 30.0%
!!! TGTTTTGAGGATATGAAAAG+AGG - chr1_1:50786645-50786664 None:intergenic 30.0%
CAATTATGCTCACAATTTGA+GGG + chr1_1:50786687-50786706 Msa0026750:intron 30.0%
!!! TTTTTTTTGGATACCGATCT+AGG + chr1_1:50786816-50786835 Msa0026750:intron 30.0%
ACTGTTAAAAGATGACTCAT+CGG - chr1_1:50787117-50787136 None:intergenic 30.0%
ACAAAGTAATAAAGGAGGAA+TGG - chr1_1:50787172-50787191 None:intergenic 30.0%
GAATGTGGACAAAGTAATAA+AGG - chr1_1:50787180-50787199 None:intergenic 30.0%
TTTAAATCCACATGCATCAT+TGG + chr1_1:50787222-50787241 Msa0026750:intron 30.0%
CTTAATACACATTTAAGCAC+TGG - chr1_1:50787303-50787322 None:intergenic 30.0%
ACTCTGCATAAACATAATCT+CGG - chr1_1:50787700-50787719 None:intergenic 30.0%
! AGGTTTTCTTTTCAATAGCT+CGG + chr1_1:50787745-50787764 Msa0026750:CDS 30.0%
AAAGAAAACCAGCAATATCA+AGG - chr1_1:50787924-50787943 None:intergenic 30.0%
ATTAATTTCCCAACATAGGA+AGG - chr1_1:50788258-50788277 None:intergenic 30.0%
TGTGATTAATTTCCCAACAT+AGG - chr1_1:50788262-50788281 None:intergenic 30.0%
TACGAAGCTAAGCAATATAT+TGG - chr1_1:50788404-50788423 None:intergenic 30.0%
! AGAAGTATGAAGAAATGACA+TGG - chr1_1:50788570-50788589 None:intergenic 30.0%
! AGAAAGTAAGAGGATTGTTT+TGG + chr1_1:50788679-50788698 Msa0026750:intron 30.0%
TTGTTTGGTATAAGAGAAAG+TGG + chr1_1:50788702-50788721 Msa0026750:intron 30.0%
GAGAAAGTGGAATAGAAAAT+TGG + chr1_1:50788715-50788734 Msa0026750:intron 30.0%
AAAGTGGAATAGAAAATTGG+AGG + chr1_1:50788718-50788737 Msa0026750:intron 30.0%
TTTGAAAAAAATACTCCCTC+CGG + chr1_1:50788950-50788969 Msa0026750:intron 30.0%
!! AGATAAAAATAGGGGCATTA+AGG + chr1_1:50789152-50789171 Msa0026750:intron 30.0%
TTCTTTCCTTCACCTTTATA+AGG + chr1_1:50789262-50789281 Msa0026750:intron 30.0%
! TTGTTTGGAACTCCTTATAA+AGG - chr1_1:50789277-50789296 None:intergenic 30.0%
AAGAAAGTCTTTCTGTTGTT+TGG - chr1_1:50789292-50789311 None:intergenic 30.0%
! TAAGGGTATGTTTGTTTCAA+GGG - chr1_1:50789347-50789366 None:intergenic 30.0%
TTGAAACAAACATACCCTTA+GGG + chr1_1:50789347-50789366 Msa0026750:intron 30.0%
ATCTTTCCTTTCACTTTCTT+TGG - chr1_1:50789386-50789405 None:intergenic 30.0%
GTAAGAGGAAAGATTGTTAA+AGG + chr1_1:50789407-50789426 Msa0026750:intron 30.0%
GAAAATATGAGGAAAGTGAA+TGG + chr1_1:50789433-50789452 Msa0026750:intron 30.0%
TAGTGAAAGTGAATAGAAAG+TGG + chr1_1:50789488-50789507 Msa0026750:intron 30.0%
! GTGCTGATGGAAAAATTTAT+AGG - chr1_1:50789696-50789715 None:intergenic 30.0%
TTTAGTCCCTAAAATGCTTA+AGG + chr1_1:50789749-50789768 Msa0026750:intron 30.0%
TGCTTAAGGAAAATGTTACA+AGG + chr1_1:50789763-50789782 Msa0026750:intron 30.0%
CACAACCTGGTAATATTATT+TGG - chr1_1:50790063-50790082 None:intergenic 30.0%
TCAAAAAAGAAGTGACTTAG+TGG + chr1_1:50790708-50790727 Msa0026750:intron 30.0%
CAAAAAAGAAGTGACTTAGT+GGG + chr1_1:50790709-50790728 Msa0026750:intron 30.0%
AAAAAAGAAGTGACTTAGTG+GGG + chr1_1:50790710-50790729 Msa0026750:intron 30.0%
TGACCGTACCTAAAAAAAAA+TGG - chr1_1:50790951-50790970 None:intergenic 30.0%
!! AACTTGTTTCTGCTCTATAT+AGG - chr1_1:50791039-50791058 None:intergenic 30.0%
!!! AGGAAAGATTGTTTTTTGTG+GGG - chr1_1:50791072-50791091 None:intergenic 30.0%
!!! CAAGGAAAGATTGTTTTTTG+TGG - chr1_1:50791074-50791093 None:intergenic 30.0%
GTTCAATTATTACTGTAGCA+AGG - chr1_1:50791092-50791111 None:intergenic 30.0%
GTAATAATTGAACCAAACCA+TGG + chr1_1:50791099-50791118 Msa0026750:intron 30.0%
AAATTTGTGATTCCATGGTT+TGG - chr1_1:50791114-50791133 None:intergenic 30.0%
!! GATGAAGAGTTTGTTGTTGT+TGG - chr1_1:50783470-50783489 None:intergenic 35.0%
GTCGAGATCTGAAAAGAAAA+TGG - chr1_1:50783503-50783522 None:intergenic 35.0%
TTGCTATAGTAGAAGGAGAT+AGG - chr1_1:50783661-50783680 None:intergenic 35.0%
CTAATATGATTGATCCACGA+TGG - chr1_1:50783684-50783703 None:intergenic 35.0%
CATCGTGGATCAATCATATT+AGG + chr1_1:50783682-50783701 Msa0026750:five_prime_UTR 35.0%
!! TGGAGGCAGTAACTTATTTT+TGG + chr1_1:50783926-50783945 Msa0026750:intron 35.0%
! ACTTGAGTCTTTTGGCAAAA+TGG + chr1_1:50784175-50784194 Msa0026750:intron 35.0%
TACAACATGATTCTCCTTTG+TGG + chr1_1:50784211-50784230 Msa0026750:intron 35.0%
! TCCGATCAAACTTTTTGACA+AGG - chr1_1:50784245-50784264 None:intergenic 35.0%
! GTGGAGAGATTTAACTTCAT+TGG + chr1_1:50784299-50784318 Msa0026750:intron 35.0%
! GAGAGATTTAACTTCATTGG+AGG + chr1_1:50784302-50784321 Msa0026750:intron 35.0%
! AAGTTTGTGATCTTTTCCTG+CGG + chr1_1:50784374-50784393 Msa0026750:intron 35.0%
!! GCTTGCTATTACAGATAGAA+AGG + chr1_1:50784399-50784418 Msa0026750:intron 35.0%
!! CAACTTATGACTTTTTGGAG+GGG + chr1_1:50784619-50784638 Msa0026750:intron 35.0%
GGAAAATGATGTAGGTGAAT+TGG + chr1_1:50784653-50784672 Msa0026750:intron 35.0%
GATGTAGGTGAATTGGAAAA+AGG + chr1_1:50784660-50784679 Msa0026750:intron 35.0%
TGTAGGTGAATTGGAAAAAG+GGG + chr1_1:50784662-50784681 Msa0026750:intron 35.0%
! GAATTGGAAAAAGGGGTTTT+TGG + chr1_1:50784669-50784688 Msa0026750:intron 35.0%
TTCCAGTCCAGAATAATTTG+TGG + chr1_1:50784759-50784778 Msa0026750:intron 35.0%
TTCCACAAATTATTCTGGAC+TGG - chr1_1:50784764-50784783 None:intergenic 35.0%
! GCCTTTTCCACAAATTATTC+TGG - chr1_1:50784769-50784788 None:intergenic 35.0%
ACAAAAAACACACTCTCTAG+GGG - chr1_1:50784810-50784829 None:intergenic 35.0%
CACAAAAAACACACTCTCTA+GGG - chr1_1:50784811-50784830 None:intergenic 35.0%
!!! CTAGAGAGTGTGTTTTTTGT+GGG + chr1_1:50784810-50784829 Msa0026750:intron 35.0%
!!! TGTTTTTTGTGGGAATGATG+AGG + chr1_1:50784820-50784839 Msa0026750:intron 35.0%
TTATGTTGTTGCTCAAGTGT+GGG + chr1_1:50784871-50784890 Msa0026750:intron 35.0%
!! TGTGGGATAAGATTTTGAGA+TGG + chr1_1:50784888-50784907 Msa0026750:intron 35.0%
!!! AAGATTTTGAGATGGATAGG+TGG + chr1_1:50784896-50784915 Msa0026750:intron 35.0%
!!! AGATTTTGAGATGGATAGGT+GGG + chr1_1:50784897-50784916 Msa0026750:intron 35.0%
CACCATGTATGTTCTATGAA+TGG + chr1_1:50785077-50785096 Msa0026750:intron 35.0%
CTATGAATGGAAATGGTGTA+TGG + chr1_1:50785090-50785109 Msa0026750:intron 35.0%
!!! TTCTTTTTCAGCGCTGTTTT+GGG + chr1_1:50785156-50785175 Msa0026750:intron 35.0%
!!! TTTTCCTCTTTTTTTGGAGG+GGG + chr1_1:50785251-50785270 Msa0026750:intron 35.0%
!! TTTGTTTGTTGTTCCAGCAT+CGG + chr1_1:50785338-50785357 Msa0026750:intron 35.0%
! GTTTTCAACTTATTTCCCCA+AGG - chr1_1:50785513-50785532 None:intergenic 35.0%
!!! CATTCTTTTTTCACATTGGC+AGG + chr1_1:50785703-50785722 Msa0026750:intron 35.0%
CCCAATGGTTGTAATAAAAC+TGG - chr1_1:50785779-50785798 None:intergenic 35.0%
AAGAGACAAAAGAAGAACAG+CGG - chr1_1:50785844-50785863 None:intergenic 35.0%
CAAATTGCAAATATGGGACA+CGG + chr1_1:50785958-50785977 Msa0026750:CDS 35.0%
CTGAAACTAACCAGTTGTAA+TGG - chr1_1:50786005-50786024 None:intergenic 35.0%
!! GCTGTTTTGGATGATGATAA+TGG - chr1_1:50786523-50786542 None:intergenic 35.0%
CCTCAAATTGTGAGCATAAT+TGG - chr1_1:50786689-50786708 None:intergenic 35.0%
CCAATTATGCTCACAATTTG+AGG + chr1_1:50786686-50786705 Msa0026750:intron 35.0%
TGCATATAACACTCCTAGAT+CGG - chr1_1:50786832-50786851 None:intergenic 35.0%
!! CTAGGAGTGTTATATGCATA+CGG + chr1_1:50786834-50786853 Msa0026750:intron 35.0%
!! TAGGAGTGTTATATGCATAC+GGG + chr1_1:50786835-50786854 Msa0026750:intron 35.0%
GTTATATGCATACGGGAATA+CGG + chr1_1:50786842-50786861 Msa0026750:intron 35.0%
TGTGGACAAAGTAATAAAGG+AGG - chr1_1:50787177-50787196 None:intergenic 35.0%
CATATCCAGACATCAAGAAT+TGG + chr1_1:50787353-50787372 Msa0026750:intron 35.0%
CAAAATATTAGTGGGGAACA+AGG + chr1_1:50787414-50787433 Msa0026750:CDS 35.0%
TGACATGGATGAAAGCAAAA+GGG + chr1_1:50787438-50787457 Msa0026750:CDS 35.0%
TACATGGAAAACCAAAAGGT+TGG - chr1_1:50787489-50787508 None:intergenic 35.0%
AAGTGTAGCATAGTAATCAC+AGG - chr1_1:50787521-50787540 None:intergenic 35.0%
GCTGGAAATTTATTCTCCTT+AGG + chr1_1:50787544-50787563 Msa0026750:intron 35.0%
AACTAATATGAATGTGGAGG+AGG + chr1_1:50787725-50787744 Msa0026750:CDS 35.0%
! GGTTTTCTTTTCAATAGCTC+GGG + chr1_1:50787746-50787765 Msa0026750:CDS 35.0%
CAACTGTTATGTTGCATGTT+TGG + chr1_1:50787950-50787969 Msa0026750:intron 35.0%
TTGGTTAATCTTGAGTGTCT+GGG - chr1_1:50788051-50788070 None:intergenic 35.0%
! TGCTACTTATTGGGTGTTAA+TGG + chr1_1:50788222-50788241 Msa0026750:three_prime_UTR 35.0%
AGGCTCCTGAAAAAAGAAAA+GGG - chr1_1:50788328-50788347 None:intergenic 35.0%
AGCAAACATTGTGTATAGTC+AGG - chr1_1:50788348-50788367 None:intergenic 35.0%
! AATATATTGGAGCACCAAGT+AGG - chr1_1:50788391-50788410 None:intergenic 35.0%
AAGAAATGACATGGCAGAAT+TGG - chr1_1:50788561-50788580 None:intergenic 35.0%
ATACTTCTCAAAACGCTGTT+AGG + chr1_1:50788582-50788601 Msa0026750:three_prime_UTR 35.0%
GTGAAAGGAAAGAATGAGAA+AGG + chr1_1:50788628-50788647 Msa0026750:intron 35.0%
GAAAGAGAGTAGAAAGTAAG+AGG + chr1_1:50788669-50788688 Msa0026750:intron 35.0%
!!! AGAGGATTGTTTTGGTTGTT+TGG + chr1_1:50788687-50788706 Msa0026750:intron 35.0%
! TGCTAACGTTTTGCTACATA+TGG - chr1_1:50788895-50788914 None:intergenic 35.0%
TTCTTATATATAGGACCGGA+GGG - chr1_1:50789086-50789105 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG - chr1_1:50789085-50789104 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG + chr1_1:50789085-50789104 Msa0026750:intron 35.0%
TTCTTATATATAGGACCGGA+GGG + chr1_1:50789086-50789105 Msa0026750:intron 35.0%
!!! CTTTTTTCATTTACTCCCTC+CGG - chr1_1:50789104-50789123 None:intergenic 35.0%
TTGTTTCAAGGGAAAGAAAG+TGG - chr1_1:50789336-50789355 None:intergenic 35.0%
! CTAAGGGTATGTTTGTTTCA+AGG - chr1_1:50789348-50789367 None:intergenic 35.0%
CTTGAAACAAACATACCCTT+AGG + chr1_1:50789346-50789365 Msa0026750:intron 35.0%
GTGAAAGGAAAGATTGTAAG+AGG + chr1_1:50789392-50789411 Msa0026750:intron 35.0%
!! GGTAAGTGAGATGATTTGTT+AGG + chr1_1:50789454-50789473 Msa0026750:intron 35.0%
GAAAGTGAATAGAAAGTGGA+AGG + chr1_1:50789492-50789511 Msa0026750:intron 35.0%
TGCTGATGGAAAATGTTACA+GGG - chr1_1:50789664-50789683 None:intergenic 35.0%
ATGCTGATGGAAAATGTTAC+AGG - chr1_1:50789665-50789684 None:intergenic 35.0%
ATAGGGACTAAAAATGCTGA+TGG - chr1_1:50789678-50789697 None:intergenic 35.0%
TTAGGGACTAAAACTGTTGA+TGG - chr1_1:50789741-50789760 None:intergenic 35.0%
!!! GTTTTTTGCAGTCGTTTCAT+AGG - chr1_1:50789985-50790004 None:intergenic 35.0%
AGAAATTCAAGAACACAACC+TGG - chr1_1:50790076-50790095 None:intergenic 35.0%
AATATTCAGATCCGCCAAAA+AGG + chr1_1:50790799-50790818 Msa0026750:intron 35.0%
ATATTCAGATCCGCCAAAAA+GGG + chr1_1:50790800-50790819 Msa0026750:intron 35.0%
TGCTCTATATAGGATGGAAA+GGG - chr1_1:50791029-50791048 None:intergenic 35.0%
! TGTTTCTGCTCTATATAGGA+TGG - chr1_1:50791035-50791054 None:intergenic 35.0%
ATCTTTCCCTCTACTTTCTT+TGG + chr1_1:50791159-50791178 Msa0026750:intron 35.0%
TTGGAACCAAAGAAAGTAGA+GGG - chr1_1:50791168-50791187 None:intergenic 35.0%
! TTTGGAACCAAAGAAAGTAG+AGG - chr1_1:50791169-50791188 None:intergenic 35.0%
! TGAGTGACTAAAGGTATGTT+TGG - chr1_1:50791187-50791206 None:intergenic 35.0%
CATACAGATTGAGTGACTAA+AGG - chr1_1:50791196-50791215 None:intergenic 35.0%
ACGATGGTTGCTATAGTAGA+AGG - chr1_1:50783668-50783687 None:intergenic 40.0%
TTCTACTATAGCAACCATCG+TGG + chr1_1:50783667-50783686 Msa0026750:five_prime_UTR 40.0%
CTAATCAAGCTTCTCCTCAT+CGG + chr1_1:50783763-50783782 Msa0026750:CDS 40.0%
! AGTGGTCAACTTGAGTCTTT+TGG + chr1_1:50784167-50784186 Msa0026750:intron 40.0%
ACAAGGACTTCTTTCCACAA+AGG - chr1_1:50784228-50784247 None:intergenic 40.0%
GTCAAAAAGTTTGATCGGAG+TGG + chr1_1:50784246-50784265 Msa0026750:intron 40.0%
! TCATTGGAGGATTCGGTATT+CGG + chr1_1:50784315-50784334 Msa0026750:intron 40.0%
! TGGAGGAGATTGGTTCAAAA+GGG + chr1_1:50784339-50784358 Msa0026750:intron 40.0%
ATGTTAGAAATGGGGAAGAG+TGG + chr1_1:50784443-50784462 Msa0026750:intron 40.0%
GAGAAGGTGGTTGTTTGTAT+GGG + chr1_1:50784483-50784502 Msa0026750:intron 40.0%
AATACCGAGAGAGAGATAGT+TGG + chr1_1:50784556-50784575 Msa0026750:intron 40.0%
ATACCGAGAGAGAGATAGTT+GGG + chr1_1:50784557-50784576 Msa0026750:intron 40.0%
! TTTGGAGGGGATTTTTGTGT+TGG + chr1_1:50784632-50784651 Msa0026750:intron 40.0%
!! TTGGAAAAAGGGGTTTTTGG+AGG + chr1_1:50784672-50784691 Msa0026750:intron 40.0%
!! AGAGCAAGCCACTATTTTGA+AGG - chr1_1:50784717-50784736 None:intergenic 40.0%
!! TCAAAATAGTGGCTTGCTCT+TGG + chr1_1:50784717-50784736 Msa0026750:intron 40.0%
! TCTGGACTGGAATTCTATCT+AGG - chr1_1:50784751-50784770 None:intergenic 40.0%
CCACAAAAAACACACTCTCT+AGG - chr1_1:50784812-50784831 None:intergenic 40.0%
!!! CCTAGAGAGTGTGTTTTTTG+TGG + chr1_1:50784809-50784828 Msa0026750:intron 40.0%
GTTATGTTGTTGCTCAAGTG+TGG + chr1_1:50784870-50784889 Msa0026750:intron 40.0%
!!! GATTTTGAGATGGATAGGTG+GGG + chr1_1:50784898-50784917 Msa0026750:intron 40.0%
! TCAAAGTGCTCTTATGGAAG+AGG + chr1_1:50785032-50785051 Msa0026750:intron 40.0%
!!! GTTCTTTTTCAGCGCTGTTT+TGG + chr1_1:50785155-50785174 Msa0026750:intron 40.0%
!!! TCTTTTTCAGCGCTGTTTTG+GGG + chr1_1:50785157-50785176 Msa0026750:intron 40.0%
CATCAAAACCACCCAGTATT+TGG - chr1_1:50785230-50785249 None:intergenic 40.0%
CAAACAAAACAGAGAATCGC+AGG - chr1_1:50785326-50785345 None:intergenic 40.0%
GTGGAGATATAAGGCATGTT+TGG - chr1_1:50785616-50785635 None:intergenic 40.0%
GGAGAAAGAGTGGAGATATA+AGG - chr1_1:50785625-50785644 None:intergenic 40.0%
ATACTGAAGTGGAGAAAGAG+TGG - chr1_1:50785635-50785654 None:intergenic 40.0%
!!! TTTTTTCACATTGGCAGGTG+TGG + chr1_1:50785708-50785727 Msa0026750:intron 40.0%
! TTTTTCACATTGGCAGGTGT+GGG + chr1_1:50785709-50785728 Msa0026750:intron 40.0%
CATCTGAGAAACGCAGTAAA+AGG - chr1_1:50785744-50785763 None:intergenic 40.0%
! CTTTTACTGCGTTTCTCAGA+TGG + chr1_1:50785742-50785761 Msa0026750:CDS 40.0%
! TTGTCTCTTTCTTTAGGGGA+TGG + chr1_1:50785855-50785874 Msa0026750:intron 40.0%
! TGTCTCTTTCTTTAGGGGAT+GGG + chr1_1:50785856-50785875 Msa0026750:intron 40.0%
ATAAGGACCATAGAGCTTGA+TGG + chr1_1:50785926-50785945 Msa0026750:CDS 40.0%
AATAAGCGAGAGCTCAATTG+TGG + chr1_1:50786076-50786095 Msa0026750:intron 40.0%
!! AGAAGTGTCAGACAATTGTC+TGG + chr1_1:50786364-50786383 Msa0026750:intron 40.0%
GTGTCCAAGACTTGTCTAAT+AGG + chr1_1:50786420-50786439 Msa0026750:intron 40.0%
GACACCTATTAGACAAGTCT+TGG - chr1_1:50786427-50786446 None:intergenic 40.0%
AGGTGACCAACTTCTTGAAT+TGG - chr1_1:50786567-50786586 None:intergenic 40.0%
AGGATATGAAAAGAGGGAGA+GGG - chr1_1:50786638-50786657 None:intergenic 40.0%
TCACAATTTGAGGGAGAACA+AGG + chr1_1:50786696-50786715 Msa0026750:intron 40.0%
GGATGCTTCTTCAACACTTT+GGG - chr1_1:50786743-50786762 None:intergenic 40.0%
AGGATGCTTCTTCAACACTT+TGG - chr1_1:50786744-50786763 None:intergenic 40.0%
!!! AGGCGGAGGGTTTTTTTTTT+TGG + chr1_1:50786803-50786822 Msa0026750:intron 40.0%
AATGGCGCAAAACTATAACC+AGG - chr1_1:50787154-50787173 None:intergenic 40.0%
ACTTACTCCAATGATGCATG+TGG - chr1_1:50787232-50787251 None:intergenic 40.0%
CGAATCCAATTCTTGATGTC+TGG - chr1_1:50787361-50787380 None:intergenic 40.0%
CTGACATGGATGAAAGCAAA+AGG + chr1_1:50787437-50787456 Msa0026750:CDS 40.0%
! TCACTCTTTCTCCAACCTTT+TGG + chr1_1:50787475-50787494 Msa0026750:intron 40.0%
CGTGTACATGGAAAACCAAA+AGG - chr1_1:50787493-50787512 None:intergenic 40.0%
TACTATGCTACACTTGATGC+TGG + chr1_1:50787526-50787545 Msa0026750:intron 40.0%
! TTTGAAGTTGGAACAGCCTA+AGG - chr1_1:50787563-50787582 None:intergenic 40.0%
TTAGGCTGTTCCAACTTCAA+AGG + chr1_1:50787562-50787581 Msa0026750:intron 40.0%
TAGGCTGTTCCAACTTCAAA+GGG + chr1_1:50787563-50787582 Msa0026750:intron 40.0%
TGGTTAATCTTGAGTGTCTG+GGG - chr1_1:50788050-50788069 None:intergenic 40.0%
GTTGGTTAATCTTGAGTGTC+TGG - chr1_1:50788052-50788071 None:intergenic 40.0%
AAGATTAACCAACCAGACCA+GGG + chr1_1:50788059-50788078 Msa0026750:CDS 40.0%
TTTGAGCGAGGAAGTTAGTT+TGG + chr1_1:50788151-50788170 Msa0026750:three_prime_UTR 40.0%
AGACTAGATCCTTCCTATGT+TGG + chr1_1:50788246-50788265 Msa0026750:three_prime_UTR 40.0%
GACTAGATCCTTCCTATGTT+GGG + chr1_1:50788247-50788266 Msa0026750:three_prime_UTR 40.0%
CAGGCTCCTGAAAAAAGAAA+AGG - chr1_1:50788329-50788348 None:intergenic 40.0%
!! AAACGCTGTTAGGCTTTGTT+TGG + chr1_1:50788592-50788611 Msa0026750:intron 40.0%
GGATGCACAAAGAAAGTGAA+AGG + chr1_1:50788613-50788632 Msa0026750:intron 40.0%
ACATATGAACGGAATGGTTG+AGG - chr1_1:50789203-50789222 None:intergenic 40.0%
TCAACCATTCCGTTCATATG+TGG + chr1_1:50789202-50789221 Msa0026750:intron 40.0%
CAACCATTCCGTTCATATGT+GGG + chr1_1:50789203-50789222 Msa0026750:intron 40.0%
! CTTTTCCACCCACATATGAA+CGG - chr1_1:50789214-50789233 None:intergenic 40.0%
GGAACTCCTTATAAAGGTGA+AGG - chr1_1:50789271-50789290 None:intergenic 40.0%
GGATCACCAAAGAAAGTGAA+AGG + chr1_1:50789377-50789396 Msa0026750:intron 40.0%
!! ACAGAGACTAAAAGTGCTGA+TGG - chr1_1:50789709-50789728 None:intergenic 40.0%
TATAGTATTAACGGCCCTTG+CGG - chr1_1:50790394-50790413 None:intergenic 40.0%
TTATGAGAAAAGGAACCGCT+AGG + chr1_1:50790617-50790636 Msa0026750:intron 40.0%
TATGAGAAAAGGAACCGCTA+GGG + chr1_1:50790618-50790637 Msa0026750:intron 40.0%
AGTTGTAAAGTGTAGCCAAG+AGG + chr1_1:50790735-50790754 Msa0026750:intron 40.0%
!!! GTTTTTCAAGGATTCGAACC+GGG - chr1_1:50790763-50790782 None:intergenic 40.0%
!!! GGTTTTTCAAGGATTCGAAC+CGG - chr1_1:50790764-50790783 None:intergenic 40.0%
TATATAGGATGGAAAGGGCA+CGG - chr1_1:50791024-50791043 None:intergenic 40.0%
CTGCTCTATATAGGATGGAA+AGG - chr1_1:50791030-50791049 None:intergenic 40.0%
AGCAGAAACAAGTTTGTACG+TGG + chr1_1:50791045-50791064 Msa0026750:intron 40.0%
GAAAGAAAGAGTGGAGAGTG+GGG - chr1_1:50783584-50783603 None:intergenic 45.0%
GGAAAGAAAGAGTGGAGAGT+GGG - chr1_1:50783585-50783604 None:intergenic 45.0%
TGGAAAGAAAGAGTGGAGAG+TGG - chr1_1:50783586-50783605 None:intergenic 45.0%
CGATGAGGAGAAGCTTGATT+AGG - chr1_1:50783765-50783784 None:intergenic 45.0%
! AATAAGGTGGTTTGGGGGTA+AGG + chr1_1:50784136-50784155 Msa0026750:intron 45.0%
! ATAAGGTGGTTTGGGGGTAA+GGG + chr1_1:50784137-50784156 Msa0026750:intron 45.0%
! GTCTTTTGGCAAAATGGCGT+TGG + chr1_1:50784181-50784200 Msa0026750:intron 45.0%
!! CACCATACAGAAGCACTTCT+CGG - chr1_1:50784282-50784301 None:intergenic 45.0%
! CATTGGAGGATTCGGTATTC+GGG + chr1_1:50784316-50784335 Msa0026750:intron 45.0%
! GTGGAGGAGATTGGTTCAAA+AGG + chr1_1:50784338-50784357 Msa0026750:intron 45.0%
AAAGGTTGCGAAGTTGAGTG+AGG + chr1_1:50784417-50784436 Msa0026750:intron 45.0%
GAAATGGGGAAGAGTGGAAT+TGG + chr1_1:50784449-50784468 Msa0026750:intron 45.0%
GGAGAAGGTGGTTGTTTGTA+TGG + chr1_1:50784482-50784501 Msa0026750:intron 45.0%
AAGGTGGTTGTTTGTATGGG+AGG + chr1_1:50784486-50784505 Msa0026750:intron 45.0%
TACCGAGAGAGAGATAGTTG+GGG + chr1_1:50784558-50784577 Msa0026750:intron 45.0%
!! AAGGTGCCAGAGTTTTCCAA+AGG - chr1_1:50784698-50784717 None:intergenic 45.0%
CTCTGGCACCTTCAAAATAG+TGG + chr1_1:50784706-50784725 Msa0026750:intron 45.0%
GTATGGGAGATTGCTTTGCT+AGG + chr1_1:50785107-50785126 Msa0026750:intron 45.0%
TGTTGGGGGTAACCAAATAC+TGG + chr1_1:50785215-50785234 Msa0026750:intron 45.0%
GTTGGGGGTAACCAAATACT+GGG + chr1_1:50785216-50785235 Msa0026750:intron 45.0%
!!! TCTTTTTTTGGAGGGGGTCA+GGG + chr1_1:50785257-50785276 Msa0026750:intron 45.0%
CCTGAACAACGCAACAAACA+GGG - chr1_1:50785296-50785315 None:intergenic 45.0%
TCCTGAACAACGCAACAAAC+AGG - chr1_1:50785297-50785316 None:intergenic 45.0%
! TGTTTGTTGCGTTGTTCAGG+AGG + chr1_1:50785296-50785315 Msa0026750:intron 45.0%
!! TGTTGTTCCAGCATCGGTTT+AGG + chr1_1:50785344-50785363 Msa0026750:intron 45.0%
!! GTTGTTCCAGCATCGGTTTA+GGG + chr1_1:50785345-50785364 Msa0026750:intron 45.0%
! TTGTATCCGCTCTTTTCGTC+CGG + chr1_1:50785391-50785410 Msa0026750:intron 45.0%
AGATCAGAGAACCTACCCAA+TGG - chr1_1:50785794-50785813 None:intergenic 45.0%
TCGCTTACCATCAAGCTCTA+TGG - chr1_1:50785936-50785955 None:intergenic 45.0%
CGGTTTCGAACCATTACAAC+TGG + chr1_1:50785992-50786011 Msa0026750:CDS 45.0%
AGGTGTTTGACATGTGTCCA+AGG + chr1_1:50786484-50786503 Msa0026750:intron 45.0%
GGTGTTTGACATGTGTCCAA+GGG + chr1_1:50786485-50786504 Msa0026750:intron 45.0%
ATGGGAAGATGAAGATCCCT+TGG - chr1_1:50786504-50786523 None:intergenic 45.0%
GAGGATATGAAAAGAGGGAG+AGG - chr1_1:50786639-50786658 None:intergenic 45.0%
GAGAACAAGGCTCAAGTTAC+TGG + chr1_1:50786709-50786728 Msa0026750:intron 45.0%
AGCTTATTACCGTGGAGCAA+TGG + chr1_1:50787067-50787086 Msa0026750:intron 45.0%
GCTTATTACCGTGGAGCAAT+GGG + chr1_1:50787068-50787087 Msa0026750:intron 45.0%
GCAAAATACCCATTGCTCCA+CGG - chr1_1:50787079-50787098 None:intergenic 45.0%
GCAAAACTATAACCAGGAGG+AGG - chr1_1:50787148-50787167 None:intergenic 45.0%
TGGAGAAAGAGTGAGTGTGT+GGG - chr1_1:50787469-50787488 None:intergenic 45.0%
TTGGAGAAAGAGTGAGTGTG+TGG - chr1_1:50787470-50787489 None:intergenic 45.0%
TCACAGGAGATACGTGTACA+TGG - chr1_1:50787505-50787524 None:intergenic 45.0%
!! AGAGCTTGACCCTTTGAAGT+TGG - chr1_1:50787575-50787594 None:intergenic 45.0%
CAAGCTCTTGCAGACGAATA+CGG + chr1_1:50787587-50787606 Msa0026750:CDS 45.0%
AGAAAGCGACTCAAAGACTG+AGG + chr1_1:50787788-50787807 Msa0026750:CDS 45.0%
CAAGATTAACCAACCAGACC+AGG + chr1_1:50788058-50788077 Msa0026750:CDS 45.0%
TCACAAACGTCTTCTTGCTG+TGG + chr1_1:50788101-50788120 Msa0026750:CDS 45.0%
CTTGCAACTACATTTGAGCG+AGG + chr1_1:50788139-50788158 Msa0026750:three_prime_UTR 45.0%
AAGTAGGCGAAGGATGTTGT+TGG - chr1_1:50788375-50788394 None:intergenic 45.0%
AACAACATCCTTCGCCTACT+TGG + chr1_1:50788374-50788393 Msa0026750:three_prime_UTR 45.0%
GGTGGAAAAGTTTCCAACGT+GGG + chr1_1:50789224-50789243 Msa0026750:intron 45.0%
! AATTTTTGTGGGACCCACGT+TGG - chr1_1:50789240-50789259 None:intergenic 45.0%
AGAAAGTGGTGAGGAGAGAA+AGG - chr1_1:50789322-50789341 None:intergenic 45.0%
TCAAGGGAAAGAAAGTGGTG+AGG - chr1_1:50789331-50789350 None:intergenic 45.0%
ACATACCCTTAGGGTGTGTT+TGG + chr1_1:50789356-50789375 Msa0026750:intron 45.0%
GTGATCCAAACACACCCTAA+GGG - chr1_1:50789364-50789383 None:intergenic 45.0%
TGCGGTTAGGATCAGTTTCT+TGG - chr1_1:50790376-50790395 None:intergenic 45.0%
AGAAACTGATCCTAACCGCA+AGG + chr1_1:50790376-50790395 Msa0026750:intron 45.0%
GAAACTGATCCTAACCGCAA+GGG + chr1_1:50790377-50790396 Msa0026750:intron 45.0%
TAAAGACGCAAACACCCTAG+CGG - chr1_1:50790635-50790654 None:intergenic 45.0%
!!! TATCTTTTAAAATTTTAAAA+AGG + chr1_1:50786783-50786802 Msa0026750:intron 5.0%
!!! TATATATCATTTTTATAAAA+GGG - chr1_1:50789553-50789572 None:intergenic 5.0%
!!! AATATTTTTTATGAAAAAAA+AGG - chr1_1:50790785-50790804 None:intergenic 5.0%
TAATCGGATCGAGCTCTTGC+AGG - chr1_1:50783736-50783755 None:intergenic 50.0%
CTTCTCCTCATCGGTGATAG+CGG + chr1_1:50783772-50783791 Msa0026750:CDS 50.0%
TTGATCGGAGTGGAGTCACT+TGG + chr1_1:50784256-50784275 Msa0026750:intron 50.0%
!! CGAGAAGTGCTTCTGTATGG+TGG + chr1_1:50784280-50784299 Msa0026750:intron 50.0%
CTGTAATAGCAAGCAACCGC+AGG - chr1_1:50784393-50784412 None:intergenic 50.0%
AGTGGAATTGGACGTGGTTG+TGG + chr1_1:50784461-50784480 Msa0026750:intron 50.0%
ATTGGACGTGGTTGTGGAGA+AGG + chr1_1:50784467-50784486 Msa0026750:intron 50.0%
ACCGAGAGAGAGATAGTTGG+GGG + chr1_1:50784559-50784578 Msa0026750:intron 50.0%
ACCCCCAACTATCTCTCTCT+CGG - chr1_1:50784563-50784582 None:intergenic 50.0%
AGATAGTTGGGGGTAGAGAC+TGG + chr1_1:50784569-50784588 Msa0026750:intron 50.0%
!! AAGGGGTTTTTGGAGGCCTT+TGG + chr1_1:50784679-50784698 Msa0026750:intron 50.0%
! TGGAGGCCTTTGGAAAACTC+TGG + chr1_1:50784689-50784708 Msa0026750:intron 50.0%
! AACACACTCTCTAGGGGCTT+CGG - chr1_1:50784804-50784823 None:intergenic 50.0%
TGGGAGATTGCTTTGCTAGG+TGG + chr1_1:50785110-50785129 Msa0026750:intron 50.0%
GGGAGATTGCTTTGCTAGGT+GGG + chr1_1:50785111-50785130 Msa0026750:intron 50.0%
TGCTTTGCTAGGTGGGAAGT+TGG + chr1_1:50785118-50785137 Msa0026750:intron 50.0%
GCTTTGCTAGGTGGGAAGTT+GGG + chr1_1:50785119-50785138 Msa0026750:intron 50.0%
GAAGTTGGGATTGCTGTGCA+CGG + chr1_1:50785133-50785152 Msa0026750:intron 50.0%
CTGTGTACGTGGCTGTTGAT+TGG + chr1_1:50785188-50785207 Msa0026750:intron 50.0%
! GCTGTTGATTGGCGTGTGTT+GGG + chr1_1:50785199-50785218 Msa0026750:intron 50.0%
! CTGTTGATTGGCGTGTGTTG+GGG + chr1_1:50785200-50785219 Msa0026750:intron 50.0%
! TGTTGATTGGCGTGTGTTGG+GGG + chr1_1:50785201-50785220 Msa0026750:intron 50.0%
CTGACCCCCTCCAAAAAAAG+AGG - chr1_1:50785258-50785277 None:intergenic 50.0%
!!! CTCTTTTTTTGGAGGGGGTC+AGG + chr1_1:50785256-50785275 Msa0026750:intron 50.0%
!!! CTTTTTTTGGAGGGGGTCAG+GGG + chr1_1:50785258-50785277 Msa0026750:intron 50.0%
! CCCTGTTTGTTGCGTTGTTC+AGG + chr1_1:50785293-50785312 Msa0026750:intron 50.0%
!! CGGTTTAGGGTACTGGATTG+TGG + chr1_1:50785358-50785377 Msa0026750:intron 50.0%
GGTACCATCACAAGCCATGA+TGG - chr1_1:50785417-50785436 None:intergenic 50.0%
TTGCAAATATGGGACACGGC+TGG + chr1_1:50785962-50785981 Msa0026750:CDS 50.0%
GAGGGATGCTTGTGGGATAT+TGG - chr1_1:50786620-50786639 None:intergenic 50.0%
ACGGGAATACGGCTATGACA+TGG + chr1_1:50786853-50786872 Msa0026750:intron 50.0%
TGTTGGGCAGCTTATTACCG+TGG + chr1_1:50787059-50787078 Msa0026750:intron 50.0%
CAGTAAGTTCTTCCTCCTCC+TGG + chr1_1:50787133-50787152 Msa0026750:intron 50.0%
GGCGCAAAACTATAACCAGG+AGG - chr1_1:50787151-50787170 None:intergenic 50.0%
GGAGAAAGAGTGAGTGTGTG+GGG - chr1_1:50787468-50787487 None:intergenic 50.0%
CGACGCTTCCTTGATATTGC+TGG + chr1_1:50787913-50787932 Msa0026750:intron 50.0%
CCACCCACATATGAACGGAA+TGG - chr1_1:50789209-50789228 None:intergenic 50.0%
CCATTCCGTTCATATGTGGG+TGG + chr1_1:50789206-50789225 Msa0026750:intron 50.0%
GGGTGGAAAAGTTTCCAACG+TGG + chr1_1:50789223-50789242 Msa0026750:intron 50.0%
TGGTGAGGAGAGAAAGGTGA+GGG - chr1_1:50789316-50789335 None:intergenic 50.0%
GGTGATCCAAACACACCCTA+AGG - chr1_1:50789365-50789384 None:intergenic 50.0%
TACAAAACCCGTGCATCGCA+CGG - chr1_1:50789927-50789946 None:intergenic 50.0%
TATTAACGGCCCTTGCGGTT+AGG - chr1_1:50790389-50790408 None:intergenic 50.0%
!! AAGTGTAGCCAAGAGGTACC+CGG + chr1_1:50790742-50790761 Msa0026750:intron 50.0%
TTCAGATCCGCCAAAAAGGG+CGG + chr1_1:50790803-50790822 Msa0026750:intron 50.0%
! AACCCTAATCCCGCCCTTTT+TGG - chr1_1:50790816-50790835 None:intergenic 50.0%
AAAAGGGCGGGATTAGGGTT+AGG + chr1_1:50790816-50790835 Msa0026750:intron 50.0%
ACGAACCGCTATCACCGATG+AGG - chr1_1:50783780-50783799 None:intergenic 55.0%
!! GGCCGAGAAGTGCTTCTGTA+TGG + chr1_1:50784277-50784296 Msa0026750:intron 55.0%
! TGGAGGATTCGGTATTCGGG+TGG + chr1_1:50784319-50784338 Msa0026750:intron 55.0%
! AGGATTCGGTATTCGGGTGG+AGG + chr1_1:50784322-50784341 Msa0026750:intron 55.0%
GGTATTCGGGTGGAGGAGAT+TGG + chr1_1:50784329-50784348 Msa0026750:intron 55.0%
GGGAAGAGTGGAATTGGACG+TGG + chr1_1:50784455-50784474 Msa0026750:intron 55.0%
AGTTGGGGGTAGAGACTGGA+AGG + chr1_1:50784573-50784592 Msa0026750:intron 55.0%
! ACACACTCTCTAGGGGCTTC+GGG - chr1_1:50784803-50784822 None:intergenic 55.0%
!!! AGCGCTGTTTTGGGGTTGCT+GGG + chr1_1:50785165-50785184 Msa0026750:intron 55.0%
! GGCTGTTGATTGGCGTGTGT+TGG + chr1_1:50785198-50785217 Msa0026750:intron 55.0%
GGGGGTAACCAAATACTGGG+TGG + chr1_1:50785219-50785238 Msa0026750:intron 55.0%
CCAGTACCCTAAACCGATGC+TGG - chr1_1:50785354-50785373 None:intergenic 55.0%
!! CCAGCATCGGTTTAGGGTAC+TGG + chr1_1:50785351-50785370 Msa0026750:intron 55.0%
TGATGGCCGGACGAAAAGAG+CGG - chr1_1:50785400-50785419 None:intergenic 55.0%
! CTCTTTTCGTCCGGCCATCA+TGG + chr1_1:50785400-50785419 Msa0026750:intron 55.0%
CCATCACAAGCCATGATGGC+CGG - chr1_1:50785413-50785432 None:intergenic 55.0%
AGAGGGAGAGGGATGCTTGT+GGG - chr1_1:50786627-50786646 None:intergenic 55.0%
AAGAGGGAGAGGGATGCTTG+TGG - chr1_1:50786628-50786647 None:intergenic 55.0%
AGTGGGGAACAAGGCTGACA+TGG + chr1_1:50787423-50787442 Msa0026750:CDS 55.0%
AACCAACCAGACCAGGGAGT+TGG + chr1_1:50788065-50788084 Msa0026750:CDS 55.0%
! TTGGAGCACCAAGTAGGCGA+AGG - chr1_1:50788385-50788404 None:intergenic 55.0%
GTGGTGAGGAGAGAAAGGTG+AGG - chr1_1:50789317-50789336 None:intergenic 55.0%
ACTCTAACCCGTGCGATGCA+CGG + chr1_1:50789916-50789935 Msa0026750:intron 55.0%
ACAAAACCCGTGCATCGCAC+GGG - chr1_1:50789926-50789945 None:intergenic 55.0%
GATTCGAACCGGGTACCTCT+TGG - chr1_1:50790753-50790772 None:intergenic 55.0%
TCAGATCCGCCAAAAAGGGC+GGG + chr1_1:50790804-50790823 Msa0026750:intron 55.0%
! CCTAATCCCGCCCTTTTTGG+CGG - chr1_1:50790813-50790832 None:intergenic 55.0%
CGCCAAAAAGGGCGGGATTA+GGG + chr1_1:50790811-50790830 Msa0026750:intron 55.0%
! GGATGGAAAGGGCACGGAAA+AGG - chr1_1:50791018-50791037 None:intergenic 55.0%
TCGGATCGAGCTCTTGCAGG+TGG - chr1_1:50783733-50783752 None:intergenic 60.0%
GGGGGTAAGGGATGTGAGAG+TGG + chr1_1:50784149-50784168 Msa0026750:intron 60.0%
GGACGTGGTTGTGGAGAAGG+TGG + chr1_1:50784470-50784489 Msa0026750:intron 60.0%
TGGGGGTAGAGACTGGAAGG+TGG + chr1_1:50784576-50784595 Msa0026750:intron 60.0%
GGGTAGAGACTGGAAGGTGG+AGG + chr1_1:50784579-50784598 Msa0026750:intron 60.0%
!!! CAGCGCTGTTTTGGGGTTGC+TGG + chr1_1:50785164-50785183 Msa0026750:intron 60.0%
! CCGGCCATCATGGCTTGTGA+TGG + chr1_1:50785410-50785429 Msa0026750:intron 60.0%
! GTCTGGCCAAGAGCATGCGT+CGG + chr1_1:50786381-50786400 Msa0026750:intron 60.0%
ACTGAGCCGACGCATGCTCT+TGG - chr1_1:50786390-50786409 None:intergenic 60.0%
AGCCAACTCCCTGGTCTGGT+TGG - chr1_1:50788070-50788089 None:intergenic 60.0%
CTTGAGCAGAGCCAACTCCC+TGG - chr1_1:50788079-50788098 None:intergenic 60.0%
CTCTAACCCGTGCGATGCAC+GGG + chr1_1:50789917-50789936 Msa0026750:intron 60.0%
CCGCCAAAAAGGGCGGGATT+AGG + chr1_1:50790810-50790829 Msa0026750:intron 60.0%
GGGTTGCTGGGCTGTGTACG+TGG + chr1_1:50785177-50785196 Msa0026750:intron 65.0%
! GGGACACGGCTGGTCAAGAG+CGG + chr1_1:50785972-50785991 Msa0026750:CDS 65.0%
GCAGAGCCAACTCCCTGGTC+TGG - chr1_1:50788074-50788093 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 50783443 50791241 50783443 ID=Msa0026750;Name=Msa0026750
chr1_1 mRNA 50783443 50791241 50783443 ID=Msa0026750-mRNA-1;Parent=Msa0026750;Name=Msa0026750-mRNA-1;_AED=0.15;_eAED=0.15;_QI=233|1|1|1|0.7|0.54|11|477|216
chr1_1 exon 50783443 50783594 50783443 ID=Msa0026750-mRNA-1:exon:14750;Parent=Msa0026750-mRNA-1
chr1_1 exon 50783640 50783793 50783640 ID=Msa0026750-mRNA-1:exon:14751;Parent=Msa0026750-mRNA-1
chr1_1 exon 50785725 50785797 50785725 ID=Msa0026750-mRNA-1:exon:14752;Parent=Msa0026750-mRNA-1
chr1_1 exon 50785913 50786013 50785913 ID=Msa0026750-mRNA-1:exon:14753;Parent=Msa0026750-mRNA-1
chr1_1 exon 50787069 50787134 50787069 ID=Msa0026750-mRNA-1:exon:14754;Parent=Msa0026750-mRNA-1
chr1_1 exon 50787362 50787459 50787362 ID=Msa0026750-mRNA-1:exon:14755;Parent=Msa0026750-mRNA-1
chr1_1 exon 50787566 50787628 50787566 ID=Msa0026750-mRNA-1:exon:14756;Parent=Msa0026750-mRNA-1
chr1_1 exon 50787717 50787809 50787717 ID=Msa0026750-mRNA-1:exon:14757;Parent=Msa0026750-mRNA-1
chr1_1 exon 50788047 50788463 50788047 ID=Msa0026750-mRNA-1:exon:14758;Parent=Msa0026750-mRNA-1
chr1_1 exon 50788502 50788603 50788502 ID=Msa0026750-mRNA-1:exon:14759;Parent=Msa0026750-mRNA-1
chr1_1 exon 50791200 50791241 50791200 ID=Msa0026750-mRNA-1:exon:14760;Parent=Msa0026750-mRNA-1
chr1_1 five_prime_UTR 50783443 50783594 50783443 ID=Msa0026750-mRNA-1:five_prime_utr;Parent=Msa0026750-mRNA-1
chr1_1 five_prime_UTR 50783640 50783720 50783640 ID=Msa0026750-mRNA-1:five_prime_utr;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50783721 50783793 50783721 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50785725 50785797 50785725 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50785913 50786013 50785913 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50787069 50787134 50787069 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50787362 50787459 50787362 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50787566 50787628 50787566 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50787717 50787809 50787717 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 CDS 50788047 50788130 50788047 ID=Msa0026750-mRNA-1:cds;Parent=Msa0026750-mRNA-1
chr1_1 three_prime_UTR 50788131 50788463 50788131 ID=Msa0026750-mRNA-1:three_prime_utr;Parent=Msa0026750-mRNA-1
chr1_1 three_prime_UTR 50788502 50788603 50788502 ID=Msa0026750-mRNA-1:three_prime_utr;Parent=Msa0026750-mRNA-1
chr1_1 three_prime_UTR 50791200 50791241 50791200 ID=Msa0026750-mRNA-1:three_prime_utr;Parent=Msa0026750-mRNA-1
Gene Sequence

>Msa0026750

ATGGCTGCTCCACCTGCAAGAGCTCGATCCGATTACGATTACCTAATCAAGCTTCTCCTCATCGGTGATAGCGGTGTGGGTAAAAGTTGCCTTTTACTGCGTTTCTCAGATGGTTCATTCACAACCAGTTTTATTACAACCATTGGCATTGATTTCAAAATAAGGACCATAGAGCTTGATGGTAAGCGAATCAAATTGCAAATATGGGACACGGCTGGTCAAGAGCGGTTTCGAACCATTACAACTGCTTATTACCGTGGAGCAATGGGTATTTTGCTTGTGTATGATGTCACCGATGAGTCATCTTTTAACAACATCAAGAATTGGATTCGCAACATTGAGCAGCATGCTTCTGACAATGTCAACAAAATATTAGTGGGGAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCAACTTCAAAGGGTCAAGCTCTTGCAGACGAATACGGCATCAAGTTTTTCGAAACTAGTGCAAAAACTAATATGAATGTGGAGGAGGTTTTCTTTTCAATAGCTCGGGACATCAAACAAAGACTTGCAGAAAGCGACTCAAAGACTGAGCCCCAGACACTCAAGATTAACCAACCAGACCAGGGAGTTGGCTCTGCTCAAGCATCACAAACGTCTTCTTGCTGTGGTTCTTAG
Protein sequence

>Msa0026750

MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKTEPQTLKINQPDQGVGSAQASQTSSCCGS*