AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0278840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278840 MtrunA17_Chr2g0292391 99.641 836 3 0 1 836 1 836 0.0 1733
Msa0278840 MtrunA17_Chr4g0028991 69.286 840 239 7 4 836 19 846 0.0 1196
Msa0278840 MtrunA17_Chr2g0331131 67.305 835 258 9 9 836 10 836 0.0 1164
Msa0278840 MtrunA17_Chr3g0140351 66.547 834 259 9 9 836 16 835 0.0 1156
Msa0278840 MtrunA17_Chr8g0340411 66.307 834 263 9 9 836 11 832 0.0 1152
Msa0278840 MtrunA17_Chr2g0326731 63.345 843 283 9 4 836 13 839 0.0 1100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278840 AT2G34710.1 78.784 839 164 9 7 836 19 852 0.0 1363
Msa0278840 AT1G30490.1 76.813 841 170 10 7 836 15 841 0.0 1337
Msa0278840 AT5G60690.1 66.824 847 248 11 4 836 15 842 0.0 1148
Msa0278840 AT1G52150.1 66.069 837 262 13 9 836 13 836 0.0 1129
Msa0278840 AT1G52150.2 66.110 838 261 14 9 836 13 837 0.0 1126
Msa0278840 AT4G32880.1 64.508 834 279 12 9 836 11 833 0.0 1111
Msa0278840 AT1G52150.3 65.906 789 247 13 9 788 13 788 0.0 1052
Msa0278840 AT5G32670.1 80.000 70 14 0 286 355 37 106 1.31e-31 122
Msa0278840 AT3G03260.2 22.500 480 262 21 16 409 29 484 1.56e-11 68.2
Msa0278840 AT4G04890.2 30.534 131 62 3 13 122 65 187 2.70e-11 67.8
Msa0278840 AT4G04890.2 21.569 510 302 19 189 670 297 736 8.95e-11 66.2
Msa0278840 AT4G04890.1 30.534 131 62 3 13 122 65 187 2.70e-11 67.8
Msa0278840 AT4G04890.1 21.569 510 302 19 189 670 297 736 8.95e-11 66.2
Msa0278840 AT4G21750.2 23.625 309 191 10 189 478 306 588 3.66e-11 67.4
Msa0278840 AT4G21750.1 23.625 309 191 10 189 478 306 588 3.66e-11 67.4
Msa0278840 AT4G21750.3 23.625 309 191 10 189 478 306 588 3.66e-11 67.4
Msa0278840 AT4G21750.4 23.625 309 191 10 189 478 306 588 3.66e-11 67.4
Msa0278840 AT3G61150.1 31.783 129 67 3 13 124 113 237 9.20e-11 66.2

Find 242 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGATACTTAACTGATTT+AGG 0.211026 2_3:-11975899 None:intergenic
CGTGCCAGTGCAACATCTTC+TGG 0.212898 2_3:-11975626 None:intergenic
CCACTCTCTTTCATAGAAAA+TGG 0.263136 2_3:-11972016 None:intergenic
AGTGATTCTCAAAGGTAAAT+TGG 0.270937 2_3:-11976131 None:intergenic
TCTCATCTGGTGTATGAAAA+TGG 0.286768 2_3:+11973188 Msa0278840:CDS
GATGCCCTCTTATTGCCTTC+TGG 0.294752 2_3:+11975854 Msa0278840:CDS
CGATCAGAATGGGCTGATTA+TGG 0.299721 2_3:+11975350 Msa0278840:CDS
ATAGAAAGTGCCATTGTAAA+AGG 0.300427 2_3:-11972148 None:intergenic
TCCAAAGCTTCAACTTGTTC+AGG 0.301125 2_3:-11972211 None:intergenic
AAAGTTAAGTATCTTGATTA+TGG 0.305354 2_3:-11977023 None:intergenic
CGATGACGGTTGGTCGTTGC+TGG 0.308758 2_3:+11975047 Msa0278840:CDS
CTTGGGCCAAAGTCTCTTCC+TGG 0.311536 2_3:+11976258 Msa0278840:CDS
CTGCAAAGGATTCATCTATA+GGG 0.317197 2_3:-11975829 None:intergenic
CGTGCCAAAGCATGAGCTTC+TGG 0.318520 2_3:-11976285 None:intergenic
GCTTCTACTGGTGGCCCTAC+AGG 0.321934 2_3:+11974388 Msa0278840:CDS
CCCTTTGAGGACGCTGAGTT+GGG 0.322005 2_3:-11973462 None:intergenic
CGCTATCCCACTAGAGTTGC+GGG 0.322607 2_3:-11973825 None:intergenic
TCATCAATGTTCCCAACATT+TGG 0.323462 2_3:+11975141 Msa0278840:CDS
TAGAGGGGCCTCAGAACTTC+AGG 0.327055 2_3:-11974621 None:intergenic
TGGCTGCAGCACGAGACTTT+TGG 0.327088 2_3:+11974219 Msa0278840:CDS
AATTACCTGTTGCATAATCT+TGG 0.333667 2_3:-11976746 None:intergenic
CTGGGAAAGCCACCGGGTCT+TGG 0.333766 2_3:-11975428 None:intergenic
TCTGCAAAGGATTCATCTAT+AGG 0.335291 2_3:-11975830 None:intergenic
CACCCAGTCGACAGCAGTTC+CGG 0.346069 2_3:-11973656 None:intergenic
GTGATCAACAATATGAATAA+TGG 0.348818 2_3:-11974488 None:intergenic
AACCTAAACAGATCAAAGTT+TGG 0.353061 2_3:+11972317 Msa0278840:CDS
GTTCTTCTTCTTCACTCTGC+AGG 0.354478 2_3:-11972060 None:intergenic
TGAAAATGATGAAGCTAGTT+TGG 0.359530 2_3:-11972082 None:intergenic
CGTGCTGCAGCCAAAGTTGT+AGG 0.366709 2_3:-11974209 None:intergenic
TCCTGAACAAGTTGAAGCTT+TGG 0.370693 2_3:+11972210 Msa0278840:CDS
AACCAAACTTTGATCTGTTT+AGG 0.371881 2_3:-11972319 None:intergenic
TGGTTTGAAAAGGTGAATAT+TGG 0.372040 2_3:-11976619 None:intergenic
GGAATTGATGAAAATTCAAT+TGG 0.372836 2_3:+11975782 Msa0278840:CDS
TAGCTTTCATGTTCATCAAC+TGG 0.374323 2_3:+11976980 Msa0278840:CDS
GAAAACCAGAAGGCAATAAG+AGG 0.376994 2_3:-11975859 None:intergenic
TGCAATGAACAAGCTCTTGA+TGG 0.381020 2_3:+11973136 Msa0278840:CDS
ACTGAGATATACTACAAGTT+TGG 0.384206 2_3:+11974244 Msa0278840:CDS
GACGTATGCGCCTACAACTT+TGG 0.386052 2_3:+11974199 Msa0278840:intron
CCTGGCAGAGTTCCTATCTA+AGG 0.394397 2_3:+11973630 Msa0278840:CDS
CAACTGTCTTGGATAGTATC+AGG 0.412660 2_3:-11977103 None:intergenic
TCTCGGCCAGGTACTCAGCT+TGG 0.412971 2_3:+11976240 Msa0278840:CDS
GTCGACTGGGTGCAGATGAT+TGG 0.420555 2_3:+11973667 Msa0278840:CDS
CCACAACACTACGCACATAC+TGG 0.420779 2_3:-11976182 None:intergenic
AGGTAAAATGACCTGGCTGC+TGG 0.424070 2_3:-11975447 None:intergenic
CTCGGCCAGGTACTCAGCTT+GGG 0.425766 2_3:+11976241 Msa0278840:CDS
AAAGAGAGTGGAGGCTCTCT+TGG 0.430669 2_3:+11972028 Msa0278840:five_prime_UTR
CGTCCATCTGGTGAAGGTGC+TGG 0.432133 2_3:+11976066 Msa0278840:CDS
TGTCTTTGTGTAGCCTGGTC+CGG 0.433455 2_3:+11973778 Msa0278840:intron
GGGTTGTTTGCATCCCTTTG+AGG 0.434329 2_3:-11973475 None:intergenic
CTTCCTTTCTTTGCTTCTCA+CGG 0.436865 2_3:-11973079 None:intergenic
TTCGCCAGAAGCTCATGCTT+TGG 0.437914 2_3:+11976281 Msa0278840:CDS
GAAAATTAGTACAACTGTCT+TGG 0.439310 2_3:-11977114 None:intergenic
GTTCTCCAAGATTATGCAAC+AGG 0.439721 2_3:+11976741 Msa0278840:CDS
TCTAGTAATGCTCGTCCATC+TGG 0.440636 2_3:+11976054 Msa0278840:CDS
CTGGCTGCTGGGAAAGCCAC+CGG 0.441166 2_3:-11975435 None:intergenic
GTGCCAGTGCAACATCTTCT+GGG 0.442652 2_3:-11975625 None:intergenic
GAGCATTAGAATAGTTCAAA+AGG 0.443481 2_3:-11977153 None:intergenic
ATAGAAAATGGTGAGGTTGA+AGG 0.445451 2_3:-11972004 None:intergenic
TCCCTTTGAGGACGCTGAGT+TGG 0.445674 2_3:-11973463 None:intergenic
CAGGGTTATGCATCTCTGCC+AGG 0.448828 2_3:+11976865 Msa0278840:intron
GTTTAGGTTCAATGTTAGAA+AGG 0.451232 2_3:-11972303 None:intergenic
GCAGAAGCAAGTTTCTCATC+TGG 0.452876 2_3:+11973175 Msa0278840:CDS
TTTGTGTATCAAGTATGAAT+AGG 0.458792 2_3:+11976893 Msa0278840:CDS
TAGCCTGGTCCGGAATCTAT+TGG 0.459912 2_3:+11973788 Msa0278840:intron
TCAGCTCTCACAAAATTTGA+CGG 0.461588 2_3:-11974418 None:intergenic
CACGTTTACAGACAGTGAAT+AGG 0.461719 2_3:+11973105 Msa0278840:CDS
GCATGAGCTTCTGGCGAACC+AGG 0.462184 2_3:-11976276 None:intergenic
TCCAGTGGAGAAATTCAGTA+TGG 0.463307 2_3:+11974796 Msa0278840:CDS
CTACCGGAACTGCTGTCGAC+TGG 0.464066 2_3:+11973653 Msa0278840:CDS
CTGCAGTAGCATTGATGCCT+TGG 0.464912 2_3:-11975181 None:intergenic
TAGTCTTCTCGCCGTGGCTG+AGG 0.466571 2_3:+11973603 Msa0278840:intron
TGTTGTCTTCTCAAAGAACT+AGG 0.467328 2_3:-11972259 None:intergenic
TCGACTGGGTGCAGATGATT+GGG 0.468510 2_3:+11973668 Msa0278840:CDS
CAGTTCCGGTAGCCTTAGAT+AGG 0.468587 2_3:-11973642 None:intergenic
AGAACATTGGATTTACTTGA+AGG 0.468751 2_3:+11976030 Msa0278840:CDS
CCATGGCAATTGCGCCCTCT+CGG 0.469500 2_3:+11976223 Msa0278840:CDS
CTTGGACACGGAACTGCATA+GGG 0.470550 2_3:-11975410 None:intergenic
TAAATTGGAATGCAATTGTA+AGG 0.473795 2_3:-11976116 None:intergenic
ACTTTCTATGCATAAAGAAA+TGG 0.474459 2_3:+11972162 Msa0278840:CDS
CTTCTCAAAGAACTAGGCTT+AGG 0.476477 2_3:-11972253 None:intergenic
AGGTGTTGGCAGAGAGAGAT+GGG 0.480620 2_3:-11971952 None:intergenic
ATTAAGAACTTTCCATGCAA+TGG 0.481074 2_3:-11976935 None:intergenic
CCCAACTCAGCGTCCTCAAA+GGG 0.484390 2_3:+11973462 Msa0278840:CDS
CTCTAGACTCACAAGGCCGC+AGG 0.485153 2_3:-11973855 None:intergenic
GGCGAACCAGGAAGAGACTT+TGG 0.485486 2_3:-11976264 None:intergenic
TCTTGGACACGGAACTGCAT+AGG 0.487296 2_3:-11975411 None:intergenic
TCAACTGGTCCTTTGTCTGA+TGG 0.487503 2_3:+11976995 Msa0278840:CDS
GCGCGACAATGTGGCTTCCA+TGG 0.487773 2_3:+11976155 Msa0278840:CDS
CCTTAGATAGGAACTCTGCC+AGG 0.488058 2_3:-11973630 None:intergenic
GCAATTGCGCCCTCTCGGCC+AGG 0.488973 2_3:+11976228 Msa0278840:CDS
CATGAAAGCTAAGCAGTGAT+TGG 0.490947 2_3:-11976968 None:intergenic
CAAGCATGTCTAGTCCAGCC+TGG 0.492233 2_3:-11976639 None:intergenic
GGTGAAGGTGCTGGTTCAAA+CGG 0.495460 2_3:+11976075 Msa0278840:CDS
CTTCTACTGGTGGCCCTACA+GGG 0.495589 2_3:+11974389 Msa0278840:CDS
CAACAAAATAATACCTTAGT+GGG 0.496377 2_3:-11973878 None:intergenic
ACAACAAAATAATACCTTAG+TGG 0.496744 2_3:-11973879 None:intergenic
GGTAAAATGACCTGGCTGCT+GGG 0.497199 2_3:-11975446 None:intergenic
CGCCGTGGCTGAGGAGACCC+TGG 0.498447 2_3:+11973612 Msa0278840:CDS
GAGGGAGCATCGATCAGAAT+GGG 0.498992 2_3:+11975340 Msa0278840:CDS
ATGCCAATAGATTCCGGACC+AGG 0.499644 2_3:-11973791 None:intergenic
AGGGATGCAAACAACCCAGC+TGG 0.499948 2_3:+11973481 Msa0278840:CDS
CCTGGAGGTAGTTCGTATAG+AGG 0.500505 2_3:+11975589 Msa0278840:CDS
CTTAACTGATTTAGGATCCA+AGG 0.504335 2_3:-11975891 None:intergenic
AAAGGTGTTACTAACCCAGC+TGG 0.505524 2_3:-11973496 None:intergenic
ATGCAATATTGAGACAACTT+TGG 0.505777 2_3:+11976465 Msa0278840:CDS
GCAACGATGCCAATAGATTC+CGG 0.506272 2_3:-11973797 None:intergenic
GCTGTTTCCCGCAACTCTAG+TGG 0.506941 2_3:+11973818 Msa0278840:CDS
CAGTCTATCTTTAAGAATCT+CGG 0.507367 2_3:-11973986 None:intergenic
AGACACCACCTCCAAATGTT+GGG 0.507773 2_3:-11975152 None:intergenic
TGAGGGAGCATCGATCAGAA+TGG 0.509076 2_3:+11975339 Msa0278840:CDS
TGGATGCTGGTAAATATGTA+AGG 0.509737 2_3:+11972182 Msa0278840:CDS
TACCGGAACTGCTGTCGACT+GGG 0.512119 2_3:+11973654 Msa0278840:CDS
TCAATGTTCCCAACATTTGG+AGG 0.512154 2_3:+11975144 Msa0278840:CDS
TGGGAACATTGATGAATAGT+TGG 0.512795 2_3:-11975133 None:intergenic
CTAAAAGTTCTCAAAACAGC+TGG 0.514675 2_3:-11974832 None:intergenic
TTTGGCCCAAGCTGAGTACC+TGG 0.517249 2_3:-11976246 None:intergenic
TCCAATGTTCTTGATGTGGT+TGG 0.518577 2_3:-11976018 None:intergenic
AAGGTGTTGGCAGAGAGAGA+TGG 0.518928 2_3:-11971953 None:intergenic
TAGTCCAGCCTGGTTTGAAA+AGG 0.518962 2_3:-11976629 None:intergenic
TGGTGAGGTTGAAGGTGGTA+AGG 0.519188 2_3:-11971996 None:intergenic
AGTATTGTTCCCACTGGTGG+TGG 0.521836 2_3:+11974045 Msa0278840:CDS
CTTGAGACAAGTAGCAGAGT+AGG 0.522118 2_3:-11975381 None:intergenic
GGGATAGCGGCGCGAGCCTG+CGG 0.522988 2_3:+11973839 Msa0278840:CDS
AAGACACCACCTCCAAATGT+TGG 0.525330 2_3:-11975153 None:intergenic
CGGTGGCTTTCCCAGCAGCC+AGG 0.526408 2_3:+11975436 Msa0278840:CDS
GATAAAGTTCTTGATGAAGC+TGG 0.529856 2_3:+11976697 Msa0278840:CDS
CTTATTAGACCTTGCGAGGG+GGG 0.531367 2_3:+11974460 Msa0278840:CDS
GATGGATATCTAGAAGCTAC+AGG 0.533976 2_3:+11976307 Msa0278840:CDS
TGGTCGTTGCTGGGAAATGA+TGG 0.534044 2_3:+11975057 Msa0278840:CDS
AGCTGAGTACCTGGCCGAGA+GGG 0.534467 2_3:-11976237 None:intergenic
CCTCTATACGAACTACCTCC+AGG 0.536475 2_3:-11975589 None:intergenic
CCGAGAGGGCGCAATTGCCA+TGG 0.536523 2_3:-11976223 None:intergenic
GTTCAAACGGATACAACCTT+AGG 0.536568 2_3:+11976088 Msa0278840:CDS
TGCTCGATCGTAGGAGCAAG+AGG 0.537333 2_3:-11975467 None:intergenic
ATTGTTCCCACTGGTGGTGG+TGG 0.537797 2_3:+11974048 Msa0278840:CDS
ACCCAACTCAGCGTCCTCAA+AGG 0.537810 2_3:+11973461 Msa0278840:CDS
CTGTTTCCCGCAACTCTAGT+GGG 0.539369 2_3:+11973819 Msa0278840:CDS
ACCATACTGAATTTCTCCAC+TGG 0.540930 2_3:-11974797 None:intergenic
CTCCCCAGAAGATGTTGCAC+TGG 0.541488 2_3:+11975622 Msa0278840:CDS
TATACTACAAGTTTGGAAGA+TGG 0.542037 2_3:+11974251 Msa0278840:CDS
CAAGGCATCAATGCTACTGC+AGG 0.542378 2_3:+11975182 Msa0278840:CDS
GGGTTCAATGATGCTGTGAA+TGG 0.547394 2_3:+11975018 Msa0278840:CDS
ATGCATAAAGAAATGGATGC+TGG 0.548344 2_3:+11972169 Msa0278840:CDS
ACCTCTTCGTGCTCGATCGT+AGG 0.549405 2_3:-11975476 None:intergenic
GAGAAACTTGCTTCTGCAGA+CGG 0.551279 2_3:-11973169 None:intergenic
TGGCTGCTGGGAAAGCCACC+GGG 0.551326 2_3:-11975434 None:intergenic
GGTGCAGATGATTGGGATGA+AGG 0.553628 2_3:+11973675 Msa0278840:CDS
TTGAGTATTGTTCCCACTGG+TGG 0.554422 2_3:+11974042 Msa0278840:CDS
GGAGAAATTCAGTATGGTGG+CGG 0.556309 2_3:+11974802 Msa0278840:CDS
AGATCGTTGAATGCTTCTAC+TGG 0.557406 2_3:+11974376 Msa0278840:CDS
GAGAAATTCAGTATGGTGGC+GGG 0.558050 2_3:+11974803 Msa0278840:CDS
AAGTTTGGTTTCAAAACCGA+AGG 0.558405 2_3:+11972332 Msa0278840:CDS
GTGTTGTGGCATCAGTTCAG+AGG 0.560143 2_3:+11976196 Msa0278840:CDS
AAGTTCTTGATGAAGCTGGC+AGG 0.560167 2_3:+11976701 Msa0278840:CDS
TGTTGTGGCATCAGTTCAGA+GGG 0.563344 2_3:+11976197 Msa0278840:CDS
CTCACAAAATTTGACGGAGA+AGG 0.564082 2_3:-11974412 None:intergenic
TTGACGGAGAAGGCCCTGTA+GGG 0.564292 2_3:-11974402 None:intergenic
AGCACATAATTGCATCAGAA+TGG 0.566597 2_3:-11976490 None:intergenic
TTCCTTATTAGACCTTGCGA+GGG 0.569278 2_3:+11974457 Msa0278840:CDS
ATGTTCCCAACATTTGGAGG+TGG 0.569970 2_3:+11975147 Msa0278840:CDS
CAATTGTAAGGACCGACCTA+AGG 0.571125 2_3:-11976104 None:intergenic
ACGCACATACTGGCGAGCCA+TGG 0.571373 2_3:-11976172 None:intergenic
ATCAGTTCAGAGGGTTGCCA+TGG 0.571681 2_3:+11976206 Msa0278840:CDS
GGTTCAATGTTAGAAAGGAT+AGG 0.572911 2_3:-11972298 None:intergenic
AAGCCACCGGGTCTTGGACA+CGG 0.573476 2_3:-11975422 None:intergenic
CCGCTATCCCACTAGAGTTG+CGG 0.574881 2_3:-11973826 None:intergenic
TTTCCTTATTAGACCTTGCG+AGG 0.575216 2_3:+11974456 Msa0278840:CDS
GAACCAGCACCTTCACCAGA+TGG 0.575410 2_3:-11976069 None:intergenic
GGAGTGTCCCTGAAGTTCTG+AGG 0.576646 2_3:+11974613 Msa0278840:CDS
TCCAACCACATCAAGAACAT+TGG 0.578165 2_3:+11976017 Msa0278840:CDS
TTCTATTAGTCTTCTCGCCG+TGG 0.578172 2_3:+11973597 Msa0278840:intron
GTATTGAGTATTGTTCCCAC+TGG 0.580551 2_3:+11974039 Msa0278840:CDS
CTTATGAGCAAGCCATTGCA+TGG 0.582458 2_3:+11976923 Msa0278840:CDS
GTTGGCAGAGAGAGATGGGA+TGG 0.582855 2_3:-11971948 None:intergenic
TTTGACGGAGAAGGCCCTGT+AGG 0.582982 2_3:-11974403 None:intergenic
TTAACTGATTTAGGATCCAA+GGG 0.583082 2_3:-11975890 None:intergenic
GAGTTCCTATCTAAGGCTAC+CGG 0.583759 2_3:+11973637 Msa0278840:CDS
ACTTATATATATAGTCATAG+AGG 0.584899 2_3:-11977175 None:intergenic
AATAGAGCTTATGTACATGC+AGG 0.586783 2_3:+11974074 Msa0278840:CDS
AAAACAAAGACAGAAGGTGT+TGG 0.587231 2_3:-11971966 None:intergenic
GATGACGGTTGGTCGTTGCT+GGG 0.587967 2_3:+11975048 Msa0278840:CDS
ATGCCGTGAGAAGCAAAGAA+AGG 0.588074 2_3:+11973076 Msa0278840:CDS
GGGATGCAAACAACCCAGCT+GGG 0.589348 2_3:+11973482 Msa0278840:CDS
CTTGATACACAAATCCCTCC+TGG 0.589795 2_3:-11976883 None:intergenic
GTGAATGGATTTGTCGATGA+CGG 0.594332 2_3:+11975033 Msa0278840:CDS
GCAGTTCCGTGTCCAAGACC+CGG 0.594391 2_3:+11975416 Msa0278840:CDS
TTTGGAAGATGGAAGTCTTG+TGG 0.594978 2_3:+11974262 Msa0278840:CDS
ATGGATTTGTCGATGACGGT+TGG 0.598019 2_3:+11975037 Msa0278840:CDS
CCTTATTAGACCTTGCGAGG+GGG 0.598121 2_3:+11974459 Msa0278840:CDS
TGCAAAGGATTCATCTATAG+GGG 0.599441 2_3:-11975828 None:intergenic
AGACAATAGCTGTGATTCTG+TGG 0.600443 2_3:+11973411 Msa0278840:CDS
AAGCTCATGCTTTGGCACGA+TGG 0.600650 2_3:+11976289 Msa0278840:CDS
CCGCAACTCTAGTGGGATAG+CGG 0.602930 2_3:+11973826 Msa0278840:CDS
CTCTTTCATAGAAAATGGTG+AGG 0.604373 2_3:-11972011 None:intergenic
CTGGAGGTAGTTCGTATAGA+GGG 0.605982 2_3:+11975590 Msa0278840:CDS
AACTTGTTGCAGCTTTGCAG+TGG 0.607045 2_3:+11975761 Msa0278840:intron
AGAGAGAAAACAAAGACAGA+AGG 0.609710 2_3:-11971972 None:intergenic
TCCTACGATCGAGCACGAAG+AGG 0.610109 2_3:+11975475 Msa0278840:CDS
GAAAATGGTGAGGTTGAAGG+TGG 0.611244 2_3:-11972001 None:intergenic
AGAGGGGCCTCAGAACTTCA+GGG 0.614871 2_3:-11974620 None:intergenic
AGGTGGTGTCTTGTGTGCCA+AGG 0.616015 2_3:+11975164 Msa0278840:CDS
TAAATCCAATGTTCTTGATG+TGG 0.616299 2_3:-11976022 None:intergenic
TCGTTGAATGCTTCTACTGG+TGG 0.616426 2_3:+11974379 Msa0278840:CDS
TATTGTACCACCACCACCAG+TGG 0.616482 2_3:-11974055 None:intergenic
TAAGAGGGCATCATCTGCAA+AGG 0.617843 2_3:-11975843 None:intergenic
TGCCAGGGTCTCCTCAGCCA+CGG 0.620608 2_3:-11973614 None:intergenic
GAGCAAGAGGTAAAATGACC+TGG 0.621422 2_3:-11975454 None:intergenic
TCCTTATTAGACCTTGCGAG+GGG 0.621648 2_3:+11974458 Msa0278840:CDS
AAGTTCTCAAAACAGCTGGT+TGG 0.626436 2_3:-11974828 None:intergenic
GTCGCGCAAGTGATTCTCAA+AGG 0.627622 2_3:-11976139 None:intergenic
CTTAGATAGGAACTCTGCCA+GGG 0.627679 2_3:-11973629 None:intergenic
TACTCAATACATCAACGCAT+CGG 0.631222 2_3:-11974026 None:intergenic
ATGGCTTGCTCATAAGACAC+TGG 0.631254 2_3:-11976916 None:intergenic
GTTATGCATCTCTGCCAGGA+GGG 0.632885 2_3:+11976869 Msa0278840:CDS
AATGCTCGTCCATCTGGTGA+AGG 0.634918 2_3:+11976060 Msa0278840:CDS
AAGGTGTTACTAACCCAGCT+GGG 0.638352 2_3:-11973495 None:intergenic
TGTGAGTCTAGAGCCCACTA+AGG 0.639840 2_3:+11973865 Msa0278840:CDS
ATGGTTTCTCCATCAGACAA+AGG 0.640205 2_3:-11977004 None:intergenic
AAAACCAGAAGGCAATAAGA+GGG 0.641093 2_3:-11975858 None:intergenic
CCAGTATGTGCGTAGTGTTG+TGG 0.642038 2_3:+11976182 Msa0278840:CDS
ATTGTACCACCACCACCAGT+GGG 0.642522 2_3:-11974054 None:intergenic
GAATCACTTGCGCGACAATG+TGG 0.642715 2_3:+11976146 Msa0278840:CDS
AGTGGAGAAATTCAGTATGG+TGG 0.644496 2_3:+11974799 Msa0278840:CDS
CAGATAGCACAAGAATCCAG+TGG 0.652309 2_3:+11974781 Msa0278840:CDS
GGAATAACTCGAAAACCAGA+AGG 0.653126 2_3:-11975869 None:intergenic
TTCTTAAAGATAGACTGTCA+TGG 0.657592 2_3:+11973992 Msa0278840:CDS
GGTCTAATAAGGAAACCACT+AGG 0.658788 2_3:-11974448 None:intergenic
TGCCAGTGCAACATCTTCTG+GGG 0.660194 2_3:-11975624 None:intergenic
CAGTGAAGGAGAGTAGTGTG+TGG 0.661146 2_3:-11971916 None:intergenic
AGAATCACAGCTATTGTCTG+TGG 0.665084 2_3:-11973407 None:intergenic
TGCATTGGTGCAGTTCCTGG+AGG 0.665564 2_3:+11975574 Msa0278840:intron
AAGCTGAGTACCTGGCCGAG+AGG 0.669722 2_3:-11976238 None:intergenic
GGTTATGCATCTCTGCCAGG+AGG 0.674411 2_3:+11976868 Msa0278840:CDS
AATCGAACAAGCAAAGCAGG+AGG 0.677556 2_3:-11975314 None:intergenic
GATGGAACAAGAAACAGTGA+AGG 0.678037 2_3:-11971930 None:intergenic
CAATATTGCATCACTCGCTG+CGG 0.681313 2_3:-11976453 None:intergenic
TAGTGGGCTCTAGACTCACA+AGG 0.690812 2_3:-11973862 None:intergenic
TGTGATTCTGTGGTAATGAG+TGG 0.695611 2_3:+11973421 Msa0278840:CDS
AGAGCTGAAATGCTTCCTAG+TGG 0.697674 2_3:+11974433 Msa0278840:CDS
GTTCCGTGTCCAAGACCCGG+TGG 0.700440 2_3:+11975419 Msa0278840:CDS
TTGGACACGGAACTGCATAG+GGG 0.719102 2_3:-11975409 None:intergenic
AAACGGATACAACCTTAGGT+CGG 0.721957 2_3:+11976092 Msa0278840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTACTAAATTTTAAAA+GGG - chr2_3:11972759-11972778 None:intergenic 10.0%
!!! AAATGTTACTAAATTTTAAA+AGG - chr2_3:11972760-11972779 None:intergenic 10.0%
!! AATTGTAATAATAAAATGAT+AGG - chr2_3:11974300-11974319 None:intergenic 10.0%
!! TCATAATGACAAAAAAAAAA+TGG - chr2_3:11972470-11972489 None:intergenic 15.0%
!! AATGTTACAAAATATTCAAA+GGG - chr2_3:11972568-11972587 None:intergenic 15.0%
!! AAATGTTACAAAATATTCAA+AGG - chr2_3:11972569-11972588 None:intergenic 15.0%
!! AATAATCAAGTAAAATAACT+TGG - chr2_3:11973009-11973028 None:intergenic 15.0%
!!! TTCTTTTGTAGAATAAATTA+GGG - chr2_3:11974101-11974120 None:intergenic 15.0%
!!! TTTCTTTTGTAGAATAAATT+AGG - chr2_3:11974102-11974121 None:intergenic 15.0%
!!! CTTGCATTTTAAATATTTAA+AGG - chr2_3:11977203-11977222 None:intergenic 15.0%
!!! TTAAAATGCAAGTTTTATTT+TGG + chr2_3:11977211-11977230 Msa0278840:three_prime_UTR 15.0%
!!! TAAAATGCAAGTTTTATTTT+GGG + chr2_3:11977212-11977231 Msa0278840:three_prime_UTR 15.0%
!!! TTTCTTTTTTCCTTTTACAA+TGG + chr2_3:11972138-11972157 Msa0278840:exon 20.0%
!!! GAAAAAATGTTTTCACTTTT+TGG + chr2_3:11972433-11972452 Msa0278840:intron 20.0%
!!! TTTTTGTCATTATGAAAGAA+AGG + chr2_3:11972475-11972494 Msa0278840:intron 20.0%
!!! TTTGAATGAAAATAACTTGT+GGG + chr2_3:11972501-11972520 Msa0278840:intron 20.0%
!! TTGAAAGAATGAACAAAAAA+AGG - chr2_3:11972646-11972665 None:intergenic 20.0%
!! TTAAGAAAAAAAGAACTTTG+TGG + chr2_3:11972686-11972705 Msa0278840:intron 20.0%
!!! TAATTTCAAAAGCACATTTT+TGG - chr2_3:11972859-11972878 None:intergenic 20.0%
!! ATTTATTGAAATGATTATGC+TGG + chr2_3:11974341-11974360 Msa0278840:intron 20.0%
!!! GGTATTTAACATTTTTTTTC+AGG + chr2_3:11974587-11974606 Msa0278840:intron 20.0%
!!! TTAACATTTTTTTTCAGGTT+TGG + chr2_3:11974592-11974611 Msa0278840:intron 20.0%
!!! TGAGAGTATGAATAATAAAT+TGG - chr2_3:11974951-11974970 None:intergenic 20.0%
!! TATTATTATGTGCTTATTTG+CGG + chr2_3:11975546-11975565 Msa0278840:intron 20.0%
!!! TTGTATATTTTGAAGTAGTA+AGG + chr2_3:11975693-11975712 Msa0278840:intron 20.0%
!! GTAAAAACAAATGTAATAAC+TGG + chr2_3:11976518-11976537 Msa0278840:intron 20.0%
!!! TATGCAATTTAATTTGAACA+TGG + chr2_3:11976792-11976811 Msa0278840:intron 20.0%
!!! GGAATTTTTTGAATAACTTT+AGG + chr2_3:11976813-11976832 Msa0278840:intron 20.0%
!! AAAGTTAAGTATCTTGATTA+TGG - chr2_3:11977026-11977045 None:intergenic 20.0%
!! ACTTATATATATAGTCATAG+AGG - chr2_3:11977178-11977197 None:intergenic 20.0%
! ACTTTCTATGCATAAAGAAA+TGG + chr2_3:11972162-11972181 Msa0278840:CDS 25.0%
! AAAACTGAAAAGTTTACCTT+CGG - chr2_3:11972351-11972370 None:intergenic 25.0%
!!! AAATGTTTTCACTTTTTGGT+TGG + chr2_3:11972437-11972456 Msa0278840:intron 25.0%
! CTTTGAATGAAAATAACTTG+TGG + chr2_3:11972500-11972519 Msa0278840:intron 25.0%
!! TTGAATGAAAATAACTTGTG+GGG + chr2_3:11972502-11972521 Msa0278840:intron 25.0%
! GATAAAAGAAAGAACTTTGA+AGG + chr2_3:11972592-11972611 Msa0278840:intron 25.0%
! TGAAACAAAACATTAATGCT+TGG + chr2_3:11972811-11972830 Msa0278840:intron 25.0%
!!! AAACATTAATGCTTGGTTTT+TGG + chr2_3:11972818-11972837 Msa0278840:intron 25.0%
! AAGAAATTTAAATGCCAAAG+GGG - chr2_3:11972913-11972932 None:intergenic 25.0%
! CAAGAAATTTAAATGCCAAA+GGG - chr2_3:11972914-11972933 None:intergenic 25.0%
! ACAAGAAATTTAAATGCCAA+AGG - chr2_3:11972915-11972934 None:intergenic 25.0%
!! ATGTAGTTTTCTGCATTTAA+TGG + chr2_3:11972957-11972976 Msa0278840:intron 25.0%
! ACACAATGCAACAAAAAAAA+AGG - chr2_3:11973517-11973536 None:intergenic 25.0%
!! TGACCTATTGAACAATTTTA+TGG + chr2_3:11973717-11973736 Msa0278840:intron 25.0%
! CAACCATAAAATTGTTCAAT+AGG - chr2_3:11973723-11973742 None:intergenic 25.0%
! CAACAAAATAATACCTTAGT+GGG - chr2_3:11973881-11973900 None:intergenic 25.0%
! ACAACAAAATAATACCTTAG+TGG - chr2_3:11973882-11973901 None:intergenic 25.0%
! GTGATCAACAATATGAATAA+TGG - chr2_3:11974491-11974510 None:intergenic 25.0%
! ATGCAAATACAAAATACTGA+AGG - chr2_3:11975524-11975543 None:intergenic 25.0%
! GGAATTGATGAAAATTCAAT+TGG + chr2_3:11975782-11975801 Msa0278840:CDS 25.0%
! GTTTCATTAAATTAATGCAG+TGG - chr2_3:11975933-11975952 None:intergenic 25.0%
! AATACATCAACATATGTTTC+AGG - chr2_3:11975976-11975995 None:intergenic 25.0%
! TAAATTGGAATGCAATTGTA+AGG - chr2_3:11976119-11976138 None:intergenic 25.0%
!! TATATGTTGTTGTCTTTTTC+AGG + chr2_3:11976396-11976415 Msa0278840:intron 25.0%
! AAAGTCAGAAGAATACTAAA+AGG - chr2_3:11976576-11976595 None:intergenic 25.0%
!!! ACTTTTGAGAATATTATTGC+AGG + chr2_3:11976591-11976610 Msa0278840:intron 25.0%
!!! TAATCTGTTGTTATTTTTCC+AGG + chr2_3:11976846-11976865 Msa0278840:intron 25.0%
!!! AATCTGTTGTTATTTTTCCA+GGG + chr2_3:11976847-11976866 Msa0278840:intron 25.0%
! TTTGTGTATCAAGTATGAAT+AGG + chr2_3:11976893-11976912 Msa0278840:CDS 25.0%
TGAAAATGATGAAGCTAGTT+TGG - chr2_3:11972085-11972104 None:intergenic 30.0%
!! ATAGAAAGTGCCATTGTAAA+AGG - chr2_3:11972151-11972170 None:intergenic 30.0%
! GTTTAGGTTCAATGTTAGAA+AGG - chr2_3:11972306-11972325 None:intergenic 30.0%
AACCTAAACAGATCAAAGTT+TGG + chr2_3:11972317-11972336 Msa0278840:CDS 30.0%
AACCAAACTTTGATCTGTTT+AGG - chr2_3:11972322-11972341 None:intergenic 30.0%
! ACTTTGAAGGAAATAACTTG+TGG + chr2_3:11972605-11972624 Msa0278840:intron 30.0%
! CTTTGAAGGAAATAACTTGT+GGG + chr2_3:11972606-11972625 Msa0278840:intron 30.0%
! TTTGAAGGAAATAACTTGTG+GGG + chr2_3:11972607-11972626 Msa0278840:intron 30.0%
! GCCAACTTTTCTTTTTGAAT+AGG + chr2_3:11973369-11973388 Msa0278840:intron 30.0%
GCCTATTCAAAAAGAAAAGT+TGG - chr2_3:11973373-11973392 None:intergenic 30.0%
AATTTCATTGTTCAACAGCA+AGG - chr2_3:11973918-11973937 None:intergenic 30.0%
!! TCTGTGTTTACTTTTGTCTT+AGG + chr2_3:11973960-11973979 Msa0278840:intron 30.0%
! CAGTCTATCTTTAAGAATCT+CGG - chr2_3:11973989-11974008 None:intergenic 30.0%
TTCTTAAAGATAGACTGTCA+TGG + chr2_3:11973992-11974011 Msa0278840:CDS 30.0%
ACTGAGATATACTACAAGTT+TGG + chr2_3:11974244-11974263 Msa0278840:CDS 30.0%
TATACTACAAGTTTGGAAGA+TGG + chr2_3:11974251-11974270 Msa0278840:CDS 30.0%
!! ATCACGTTGATTTAGATGTA+AGG + chr2_3:11974506-11974525 Msa0278840:intron 30.0%
!! TCACGTTGATTTAGATGTAA+GGG + chr2_3:11974507-11974526 Msa0278840:intron 30.0%
! TTGTTGAACTTTTCTGACTT+CGG + chr2_3:11974566-11974585 Msa0278840:intron 30.0%
! ATTTTTGACGATTCATAGAG+GGG - chr2_3:11974639-11974658 None:intergenic 30.0%
! GATTTTTGACGATTCATAGA+GGG - chr2_3:11974640-11974659 None:intergenic 30.0%
! AGATTTTTGACGATTCATAG+AGG - chr2_3:11974641-11974660 None:intergenic 30.0%
CTATGAATCGTCAAAAATCT+TGG + chr2_3:11974641-11974660 Msa0278840:CDS 30.0%
AGATAGAGTGAGTTAGAATT+AGG - chr2_3:11974974-11974993 None:intergenic 30.0%
!! ATCTCAACAAGTTGGTTATT+AGG - chr2_3:11975260-11975279 None:intergenic 30.0%
! TTTGCTTGTTCGATTTTTGA+GGG + chr2_3:11975322-11975341 Msa0278840:CDS 30.0%
TAAATCCAATGTTCTTGATG+TGG - chr2_3:11976025-11976044 None:intergenic 30.0%
AGAACATTGGATTTACTTGA+AGG + chr2_3:11976030-11976049 Msa0278840:CDS 30.0%
AGTGATTCTCAAAGGTAAAT+TGG - chr2_3:11976134-11976153 None:intergenic 30.0%
ATGCAATATTGAGACAACTT+TGG + chr2_3:11976465-11976484 Msa0278840:CDS 30.0%
TGGTTTGAAAAGGTGAATAT+TGG - chr2_3:11976622-11976641 None:intergenic 30.0%
! AATATTCACCTTTTCAAACC+AGG + chr2_3:11976621-11976640 Msa0278840:CDS 30.0%
AATTACCTGTTGCATAATCT+TGG - chr2_3:11976749-11976768 None:intergenic 30.0%
ATTAAGAACTTTCCATGCAA+TGG - chr2_3:11976938-11976957 None:intergenic 30.0%
GAAAATTAGTACAACTGTCT+TGG - chr2_3:11977117-11977136 None:intergenic 30.0%
GAGCATTAGAATAGTTCAAA+AGG - chr2_3:11977156-11977175 None:intergenic 30.0%
! AAAACAAAGACAGAAGGTGT+TGG - chr2_3:11971969-11971988 None:intergenic 35.0%
AGAGAGAAAACAAAGACAGA+AGG - chr2_3:11971975-11971994 None:intergenic 35.0%
ATAGAAAATGGTGAGGTTGA+AGG - chr2_3:11972007-11972026 None:intergenic 35.0%
CTCTTTCATAGAAAATGGTG+AGG - chr2_3:11972014-11972033 None:intergenic 35.0%
CCACTCTCTTTCATAGAAAA+TGG - chr2_3:11972019-11972038 None:intergenic 35.0%
! CCATTTTCTATGAAAGAGAG+TGG + chr2_3:11972016-11972035 Msa0278840:five_prime_UTR 35.0%
! TTTTCTATGAAAGAGAGTGG+AGG + chr2_3:11972019-11972038 Msa0278840:five_prime_UTR 35.0%
ATGCATAAAGAAATGGATGC+TGG + chr2_3:11972169-11972188 Msa0278840:CDS 35.0%
TGGATGCTGGTAAATATGTA+AGG + chr2_3:11972182-11972201 Msa0278840:CDS 35.0%
TGTTGTCTTCTCAAAGAACT+AGG - chr2_3:11972262-11972281 None:intergenic 35.0%
GGTTCAATGTTAGAAAGGAT+AGG - chr2_3:11972301-11972320 None:intergenic 35.0%
! AAGTTTGGTTTCAAAACCGA+AGG + chr2_3:11972332-11972351 Msa0278840:CDS 35.0%
!!! GTTTTCACTTTTTGGTTGGT+TGG + chr2_3:11972441-11972460 Msa0278840:intron 35.0%
AAGAACTTTGTGGAGAATGA+TGG + chr2_3:11972696-11972715 Msa0278840:intron 35.0%
AAAGGGGTTAATAACATCAC+TGG - chr2_3:11972897-11972916 None:intergenic 35.0%
AGTGATGTTATTAACCCCTT+TGG + chr2_3:11972896-11972915 Msa0278840:intron 35.0%
TCTGCATTTAATGGTGAATG+TGG + chr2_3:11972966-11972985 Msa0278840:intron 35.0%
TGAATGTGGTTTCTGCATAA+TGG + chr2_3:11972980-11972999 Msa0278840:intron 35.0%
TCTCATCTGGTGTATGAAAA+TGG + chr2_3:11973188-11973207 Msa0278840:CDS 35.0%
TTTAATGTCTTTGTGTAGCC+TGG + chr2_3:11973773-11973792 Msa0278840:intron 35.0%
TACTCAATACATCAACGCAT+CGG - chr2_3:11974029-11974048 None:intergenic 35.0%
AATAGAGCTTATGTACATGC+AGG + chr2_3:11974074-11974093 Msa0278840:CDS 35.0%
TCAGCTCTCACAAAATTTGA+CGG - chr2_3:11974421-11974440 None:intergenic 35.0%
! CATTTTAAACTCCACTTTGC+AGG + chr2_3:11974741-11974760 Msa0278840:intron 35.0%
CTAAAAGTTCTCAAAACAGC+TGG - chr2_3:11974835-11974854 None:intergenic 35.0%
! CTTGACACCTTTCATTTTCA+GGG + chr2_3:11974996-11975015 Msa0278840:intron 35.0%
! TTGACACCTTTCATTTTCAG+GGG + chr2_3:11974997-11975016 Msa0278840:intron 35.0%
! TCGTCTCCAAACAAGTTTTT+GGG + chr2_3:11975108-11975127 Msa0278840:CDS 35.0%
TGGGAACATTGATGAATAGT+TGG - chr2_3:11975136-11975155 None:intergenic 35.0%
TCATCAATGTTCCCAACATT+TGG + chr2_3:11975141-11975160 Msa0278840:CDS 35.0%
!! TCAACAAGTTGGTTATTAGG+AGG - chr2_3:11975257-11975276 None:intergenic 35.0%
TCAGAAAGATCTCAACAAGT+TGG - chr2_3:11975268-11975287 None:intergenic 35.0%
AAAAATCGAACAAGCAAAGC+AGG - chr2_3:11975320-11975339 None:intergenic 35.0%
! CTTTGCTTGTTCGATTTTTG+AGG + chr2_3:11975321-11975340 Msa0278840:CDS 35.0%
TTATTTGCGGTATGTTGCAT+TGG + chr2_3:11975559-11975578 Msa0278840:intron 35.0%
! ACGTGATATGTATCTTTTGC+AGG + chr2_3:11975646-11975665 Msa0278840:CDS 35.0%
CAACAAGTTTCATACACAGA+AGG - chr2_3:11975750-11975769 None:intergenic 35.0%
TGCAAAGGATTCATCTATAG+GGG - chr2_3:11975831-11975850 None:intergenic 35.0%
CTGCAAAGGATTCATCTATA+GGG - chr2_3:11975832-11975851 None:intergenic 35.0%
TCTGCAAAGGATTCATCTAT+AGG - chr2_3:11975833-11975852 None:intergenic 35.0%
AAAACCAGAAGGCAATAAGA+GGG - chr2_3:11975861-11975880 None:intergenic 35.0%
AGCACATAATTGCATCAGAA+TGG - chr2_3:11976493-11976512 None:intergenic 35.0%
GATAAAGTTCTTGATGAAGC+TGG + chr2_3:11976697-11976716 Msa0278840:CDS 35.0%
TAGCTTTCATGTTCATCAAC+TGG + chr2_3:11976980-11976999 Msa0278840:CDS 35.0%
GATGGAACAAGAAACAGTGA+AGG - chr2_3:11971933-11971952 None:intergenic 40.0%
! TCCTGAACAAGTTGAAGCTT+TGG + chr2_3:11972210-11972229 Msa0278840:CDS 40.0%
! TCCAAAGCTTCAACTTGTTC+AGG - chr2_3:11972214-11972233 None:intergenic 40.0%
CTTCTCAAAGAACTAGGCTT+AGG - chr2_3:11972256-11972275 None:intergenic 40.0%
! GAAATAACTTGTGGGGTGTT+TGG + chr2_3:11972614-11972633 Msa0278840:intron 40.0%
CTTCCTTTCTTTGCTTCTCA+CGG - chr2_3:11973082-11973101 None:intergenic 40.0%
CACGTTTACAGACAGTGAAT+AGG + chr2_3:11973105-11973124 Msa0278840:CDS 40.0%
TGCAATGAACAAGCTCTTGA+TGG + chr2_3:11973136-11973155 Msa0278840:CDS 40.0%
AGAATCACAGCTATTGTCTG+TGG - chr2_3:11973410-11973429 None:intergenic 40.0%
AGACAATAGCTGTGATTCTG+TGG + chr2_3:11973411-11973430 Msa0278840:CDS 40.0%
! TGTGATTCTGTGGTAATGAG+TGG + chr2_3:11973421-11973440 Msa0278840:CDS 40.0%
TTCATTGTTCAACAGCAAGG+AGG - chr2_3:11973915-11973934 None:intergenic 40.0%
! GTATTGAGTATTGTTCCCAC+TGG + chr2_3:11974039-11974058 Msa0278840:CDS 40.0%
TTTGGAAGATGGAAGTCTTG+TGG + chr2_3:11974262-11974281 Msa0278840:CDS 40.0%
AGATCGTTGAATGCTTCTAC+TGG + chr2_3:11974376-11974395 Msa0278840:CDS 40.0%
CTCACAAAATTTGACGGAGA+AGG - chr2_3:11974415-11974434 None:intergenic 40.0%
GGTCTAATAAGGAAACCACT+AGG - chr2_3:11974451-11974470 None:intergenic 40.0%
TTTCCTTATTAGACCTTGCG+AGG + chr2_3:11974456-11974475 Msa0278840:CDS 40.0%
TTCCTTATTAGACCTTGCGA+GGG + chr2_3:11974457-11974476 Msa0278840:CDS 40.0%
TCCAGTGGAGAAATTCAGTA+TGG + chr2_3:11974796-11974815 Msa0278840:CDS 40.0%
ACCATACTGAATTTCTCCAC+TGG - chr2_3:11974800-11974819 None:intergenic 40.0%
AGTGGAGAAATTCAGTATGG+TGG + chr2_3:11974799-11974818 Msa0278840:CDS 40.0%
AAGTTCTCAAAACAGCTGGT+TGG - chr2_3:11974831-11974850 None:intergenic 40.0%
! CTTTTAGTCAGAGACTTTGC+AGG + chr2_3:11974848-11974867 Msa0278840:CDS 40.0%
!! CCTGAAAATGAAAGGTGTCA+AGG - chr2_3:11974998-11975017 None:intergenic 40.0%
! CCTTGACACCTTTCATTTTC+AGG + chr2_3:11974995-11975014 Msa0278840:intron 40.0%
!! TGACACCTTTCATTTTCAGG+GGG + chr2_3:11974998-11975017 Msa0278840:intron 40.0%
TTGAACCCCCTGAAAATGAA+AGG - chr2_3:11975006-11975025 None:intergenic 40.0%
! GTGAATGGATTTGTCGATGA+CGG + chr2_3:11975033-11975052 Msa0278840:CDS 40.0%
! CTCGTCTCCAAACAAGTTTT+TGG + chr2_3:11975107-11975126 Msa0278840:CDS 40.0%
! CGTCTCCAAACAAGTTTTTG+GGG + chr2_3:11975109-11975128 Msa0278840:CDS 40.0%
! TTGGACCCCAAAAACTTGTT+TGG - chr2_3:11975117-11975136 None:intergenic 40.0%
TCAATGTTCCCAACATTTGG+AGG + chr2_3:11975144-11975163 Msa0278840:CDS 40.0%
GAAAACCAGAAGGCAATAAG+AGG - chr2_3:11975862-11975881 None:intergenic 40.0%
GGAATAACTCGAAAACCAGA+AGG - chr2_3:11975872-11975891 None:intergenic 40.0%
!!! TGGTTTTCGAGTTATTCCCT+TGG + chr2_3:11975874-11975893 Msa0278840:CDS 40.0%
TGTATTGAATTCTGCATCGC+AGG + chr2_3:11975990-11976009 Msa0278840:intron 40.0%
TCCAACCACATCAAGAACAT+TGG + chr2_3:11976017-11976036 Msa0278840:CDS 40.0%
TCCAATGTTCTTGATGTGGT+TGG - chr2_3:11976021-11976040 None:intergenic 40.0%
GTTCAAACGGATACAACCTT+AGG + chr2_3:11976088-11976107 Msa0278840:CDS 40.0%
AAACGGATACAACCTTAGGT+CGG + chr2_3:11976092-11976111 Msa0278840:CDS 40.0%
GATGGATATCTAGAAGCTAC+AGG + chr2_3:11976307-11976326 Msa0278840:CDS 40.0%
! GGACTCAACTCTAAAAAGCT+CGG - chr2_3:11976435-11976454 None:intergenic 40.0%
GTTCTCCAAGATTATGCAAC+AGG + chr2_3:11976741-11976760 Msa0278840:CDS 40.0%
CATGAAAGCTAAGCAGTGAT+TGG - chr2_3:11976971-11976990 None:intergenic 40.0%
ATGGTTTCTCCATCAGACAA+AGG - chr2_3:11977007-11977026 None:intergenic 40.0%
CAACTGTCTTGGATAGTATC+AGG - chr2_3:11977106-11977125 None:intergenic 40.0%
GAAAATGGTGAGGTTGAAGG+TGG - chr2_3:11972004-11972023 None:intergenic 45.0%
GTTCTTCTTCTTCACTCTGC+AGG - chr2_3:11972063-11972082 None:intergenic 45.0%
ATGCCGTGAGAAGCAAAGAA+AGG + chr2_3:11973076-11973095 Msa0278840:CDS 45.0%
! GAGAAACTTGCTTCTGCAGA+CGG - chr2_3:11973172-11973191 None:intergenic 45.0%
GCAGAAGCAAGTTTCTCATC+TGG + chr2_3:11973175-11973194 Msa0278840:CDS 45.0%
!! AAGGTGTTACTAACCCAGCT+GGG - chr2_3:11973498-11973517 None:intergenic 45.0%
!! AAAGGTGTTACTAACCCAGC+TGG - chr2_3:11973499-11973518 None:intergenic 45.0%
!! TTCTATTAGTCTTCTCGCCG+TGG + chr2_3:11973597-11973616 Msa0278840:intron 45.0%
CTTAGATAGGAACTCTGCCA+GGG - chr2_3:11973632-11973651 None:intergenic 45.0%
! GAGTTCCTATCTAAGGCTAC+CGG + chr2_3:11973637-11973656 Msa0278840:CDS 45.0%
GCAACGATGCCAATAGATTC+CGG - chr2_3:11973800-11973819 None:intergenic 45.0%
! TTGAGTATTGTTCCCACTGG+TGG + chr2_3:11974042-11974061 Msa0278840:CDS 45.0%
TCGTTGAATGCTTCTACTGG+TGG + chr2_3:11974379-11974398 Msa0278840:CDS 45.0%
AGAGCTGAAATGCTTCCTAG+TGG + chr2_3:11974433-11974452 Msa0278840:CDS 45.0%
TCCTTATTAGACCTTGCGAG+GGG + chr2_3:11974458-11974477 Msa0278840:CDS 45.0%
CAGATAGCACAAGAATCCAG+TGG + chr2_3:11974781-11974800 Msa0278840:CDS 45.0%
GGAGAAATTCAGTATGGTGG+CGG + chr2_3:11974802-11974821 Msa0278840:CDS 45.0%
GAGAAATTCAGTATGGTGGC+GGG + chr2_3:11974803-11974822 Msa0278840:CDS 45.0%
TAGTCAGAGACTTTGCAGGT+AGG + chr2_3:11974852-11974871 Msa0278840:intron 45.0%
AGTCAGAGACTTTGCAGGTA+GGG + chr2_3:11974853-11974872 Msa0278840:intron 45.0%
TTGAATCGTGGCAGCATGTT+AGG - chr2_3:11974880-11974899 None:intergenic 45.0%
GGGTTCAATGATGCTGTGAA+TGG + chr2_3:11975018-11975037 Msa0278840:CDS 45.0%
! ATGGATTTGTCGATGACGGT+TGG + chr2_3:11975037-11975056 Msa0278840:CDS 45.0%
ATGTTCCCAACATTTGGAGG+TGG + chr2_3:11975147-11975166 Msa0278840:CDS 45.0%
AGACACCACCTCCAAATGTT+GGG - chr2_3:11975155-11975174 None:intergenic 45.0%
AAGACACCACCTCCAAATGT+TGG - chr2_3:11975156-11975175 None:intergenic 45.0%
AATCGAACAAGCAAAGCAGG+AGG - chr2_3:11975317-11975336 None:intergenic 45.0%
!! CGATCAGAATGGGCTGATTA+TGG + chr2_3:11975350-11975369 Msa0278840:CDS 45.0%
CTTGAGACAAGTAGCAGAGT+AGG - chr2_3:11975384-11975403 None:intergenic 45.0%
GAGCAAGAGGTAAAATGACC+TGG - chr2_3:11975457-11975476 None:intergenic 45.0%
CTGGAGGTAGTTCGTATAGA+GGG + chr2_3:11975590-11975609 Msa0278840:CDS 45.0%
!! AACTTGTTGCAGCTTTGCAG+TGG + chr2_3:11975761-11975780 Msa0278840:intron 45.0%
!! TAAGAGGGCATCATCTGCAA+AGG - chr2_3:11975846-11975865 None:intergenic 45.0%
TTGAATTCTGCATCGCAGGA+CGG + chr2_3:11975994-11976013 Msa0278840:intron 45.0%
TCTAGTAATGCTCGTCCATC+TGG + chr2_3:11976054-11976073 Msa0278840:CDS 45.0%
CAATTGTAAGGACCGACCTA+AGG - chr2_3:11976107-11976126 None:intergenic 45.0%
TGTTGTGGCATCAGTTCAGA+GGG + chr2_3:11976197-11976216 Msa0278840:CDS 45.0%
!!! GTCTTTTTCAGGATGCACAC+TGG + chr2_3:11976407-11976426 Msa0278840:intron 45.0%
CAATATTGCATCACTCGCTG+CGG - chr2_3:11976456-11976475 None:intergenic 45.0%
! TTCACCTTTTCAAACCAGGC+TGG + chr2_3:11976625-11976644 Msa0278840:CDS 45.0%
! TAGTCCAGCCTGGTTTGAAA+AGG - chr2_3:11976632-11976651 None:intergenic 45.0%
AAGTTCTTGATGAAGCTGGC+AGG + chr2_3:11976701-11976720 Msa0278840:CDS 45.0%
CTTGATACACAAATCCCTCC+TGG - chr2_3:11976886-11976905 None:intergenic 45.0%
!! ATGGCTTGCTCATAAGACAC+TGG - chr2_3:11976919-11976938 None:intergenic 45.0%
CTTATGAGCAAGCCATTGCA+TGG + chr2_3:11976923-11976942 Msa0278840:CDS 45.0%
TCAACTGGTCCTTTGTCTGA+TGG + chr2_3:11976995-11977014 Msa0278840:CDS 45.0%
!! ATTTATTTATAGATAAATAT+TGG + chr2_3:11972776-11972795 Msa0278840:intron 5.0%
CAGTGAAGGAGAGTAGTGTG+TGG - chr2_3:11971919-11971938 None:intergenic 50.0%
!! AGGTGTTGGCAGAGAGAGAT+GGG - chr2_3:11971955-11971974 None:intergenic 50.0%
!! AAGGTGTTGGCAGAGAGAGA+TGG - chr2_3:11971956-11971975 None:intergenic 50.0%
TGGTGAGGTTGAAGGTGGTA+AGG - chr2_3:11971999-11972018 None:intergenic 50.0%
AAAGAGAGTGGAGGCTCTCT+TGG + chr2_3:11972028-11972047 Msa0278840:five_prime_UTR 50.0%
!! GCTGAGTTGGGTTTTGCTGT+TGG - chr2_3:11973453-11973472 None:intergenic 50.0%
GGGTTGTTTGCATCCCTTTG+AGG - chr2_3:11973478-11973497 None:intergenic 50.0%
CCTTAGATAGGAACTCTGCC+AGG - chr2_3:11973633-11973652 None:intergenic 50.0%
CCTGGCAGAGTTCCTATCTA+AGG + chr2_3:11973630-11973649 Msa0278840:CDS 50.0%
! CAGTTCCGGTAGCCTTAGAT+AGG - chr2_3:11973645-11973664 None:intergenic 50.0%
TCGACTGGGTGCAGATGATT+GGG + chr2_3:11973668-11973687 Msa0278840:CDS 50.0%
GGTGCAGATGATTGGGATGA+AGG + chr2_3:11973675-11973694 Msa0278840:CDS 50.0%
TGTCTTTGTGTAGCCTGGTC+CGG + chr2_3:11973778-11973797 Msa0278840:intron 50.0%
TAGCCTGGTCCGGAATCTAT+TGG + chr2_3:11973788-11973807 Msa0278840:intron 50.0%
ATGCCAATAGATTCCGGACC+AGG - chr2_3:11973794-11973813 None:intergenic 50.0%
CTGTTTCCCGCAACTCTAGT+GGG + chr2_3:11973819-11973838 Msa0278840:CDS 50.0%
!! TAGTGGGCTCTAGACTCACA+AGG - chr2_3:11973865-11973884 None:intergenic 50.0%
! TGTGAGTCTAGAGCCCACTA+AGG + chr2_3:11973865-11973884 Msa0278840:CDS 50.0%
AGTATTGTTCCCACTGGTGG+TGG + chr2_3:11974045-11974064 Msa0278840:CDS 50.0%
ATTGTACCACCACCACCAGT+GGG - chr2_3:11974057-11974076 None:intergenic 50.0%
TATTGTACCACCACCACCAG+TGG - chr2_3:11974058-11974077 None:intergenic 50.0%
GACGTATGCGCCTACAACTT+TGG + chr2_3:11974199-11974218 Msa0278840:intron 50.0%
CCTTATTAGACCTTGCGAGG+GGG + chr2_3:11974459-11974478 Msa0278840:CDS 50.0%
CTTATTAGACCTTGCGAGGG+GGG + chr2_3:11974460-11974479 Msa0278840:CDS 50.0%
GTGTTGCAATGCCTGCAAAG+TGG - chr2_3:11974755-11974774 None:intergenic 50.0%
CATGCTGCCACGATTCAATG+CGG + chr2_3:11974882-11974901 Msa0278840:intron 50.0%
CCAAATGCCGCATTGAATCG+TGG - chr2_3:11974892-11974911 None:intergenic 50.0%
CCACGATTCAATGCGGCATT+TGG + chr2_3:11974889-11974908 Msa0278840:intron 50.0%
TGGTCGTTGCTGGGAAATGA+TGG + chr2_3:11975057-11975076 Msa0278840:CDS 50.0%
!! CTGCAGTAGCATTGATGCCT+TGG - chr2_3:11975184-11975203 None:intergenic 50.0%
! CAAGGCATCAATGCTACTGC+AGG + chr2_3:11975182-11975201 Msa0278840:CDS 50.0%
!! TGAGGGAGCATCGATCAGAA+TGG + chr2_3:11975339-11975358 Msa0278840:CDS 50.0%
!! GAGGGAGCATCGATCAGAAT+GGG + chr2_3:11975340-11975359 Msa0278840:CDS 50.0%
TTGGACACGGAACTGCATAG+GGG - chr2_3:11975412-11975431 None:intergenic 50.0%
CTTGGACACGGAACTGCATA+GGG - chr2_3:11975413-11975432 None:intergenic 50.0%
TCTTGGACACGGAACTGCAT+AGG - chr2_3:11975414-11975433 None:intergenic 50.0%
GGTAAAATGACCTGGCTGCT+GGG - chr2_3:11975449-11975468 None:intergenic 50.0%
AGGTAAAATGACCTGGCTGC+TGG - chr2_3:11975450-11975469 None:intergenic 50.0%
! TGTTGCATTGGTGCAGTTCC+TGG + chr2_3:11975571-11975590 Msa0278840:intron 50.0%
CCTCTATACGAACTACCTCC+AGG - chr2_3:11975592-11975611 None:intergenic 50.0%
CCTGGAGGTAGTTCGTATAG+AGG + chr2_3:11975589-11975608 Msa0278840:CDS 50.0%
TGCCAGTGCAACATCTTCTG+GGG - chr2_3:11975627-11975646 None:intergenic 50.0%
GTGCCAGTGCAACATCTTCT+GGG - chr2_3:11975628-11975647 None:intergenic 50.0%
GATGCCCTCTTATTGCCTTC+TGG + chr2_3:11975854-11975873 Msa0278840:CDS 50.0%
AATGCTCGTCCATCTGGTGA+AGG + chr2_3:11976060-11976079 Msa0278840:CDS 50.0%
!! GGTGAAGGTGCTGGTTCAAA+CGG + chr2_3:11976075-11976094 Msa0278840:CDS 50.0%
GTCGCGCAAGTGATTCTCAA+AGG - chr2_3:11976142-11976161 None:intergenic 50.0%
GAATCACTTGCGCGACAATG+TGG + chr2_3:11976146-11976165 Msa0278840:CDS 50.0%
CCACAACACTACGCACATAC+TGG - chr2_3:11976185-11976204 None:intergenic 50.0%
CCAGTATGTGCGTAGTGTTG+TGG + chr2_3:11976182-11976201 Msa0278840:CDS 50.0%
GTGTTGTGGCATCAGTTCAG+AGG + chr2_3:11976196-11976215 Msa0278840:CDS 50.0%
ATCAGTTCAGAGGGTTGCCA+TGG + chr2_3:11976206-11976225 Msa0278840:CDS 50.0%
TTCGCCAGAAGCTCATGCTT+TGG + chr2_3:11976281-11976300 Msa0278840:CDS 50.0%
AAGCTCATGCTTTGGCACGA+TGG + chr2_3:11976289-11976308 Msa0278840:CDS 50.0%
GTTATGCATCTCTGCCAGGA+GGG + chr2_3:11976869-11976888 Msa0278840:CDS 50.0%
GTTGGCAGAGAGAGATGGGA+TGG - chr2_3:11971951-11971970 None:intergenic 55.0%
ACCCAACTCAGCGTCCTCAA+AGG + chr2_3:11973461-11973480 Msa0278840:CDS 55.0%
! CCCTTTGAGGACGCTGAGTT+GGG - chr2_3:11973465-11973484 None:intergenic 55.0%
CCCAACTCAGCGTCCTCAAA+GGG + chr2_3:11973462-11973481 Msa0278840:CDS 55.0%
! TCCCTTTGAGGACGCTGAGT+TGG - chr2_3:11973466-11973485 None:intergenic 55.0%
AGGGATGCAAACAACCCAGC+TGG + chr2_3:11973481-11973500 Msa0278840:CDS 55.0%
GGGATGCAAACAACCCAGCT+GGG + chr2_3:11973482-11973501 Msa0278840:CDS 55.0%
! TACCGGAACTGCTGTCGACT+GGG + chr2_3:11973654-11973673 Msa0278840:CDS 55.0%
GTCGACTGGGTGCAGATGAT+TGG + chr2_3:11973667-11973686 Msa0278840:CDS 55.0%
! GCTGTTTCCCGCAACTCTAG+TGG + chr2_3:11973818-11973837 Msa0278840:CDS 55.0%
CGCTATCCCACTAGAGTTGC+GGG - chr2_3:11973828-11973847 None:intergenic 55.0%
CCGCTATCCCACTAGAGTTG+CGG - chr2_3:11973829-11973848 None:intergenic 55.0%
CCGCAACTCTAGTGGGATAG+CGG + chr2_3:11973826-11973845 Msa0278840:CDS 55.0%
!! ATTGTTCCCACTGGTGGTGG+TGG + chr2_3:11974048-11974067 Msa0278840:CDS 55.0%
CGTGCTGCAGCCAAAGTTGT+AGG - chr2_3:11974212-11974231 None:intergenic 55.0%
! TGGCTGCAGCACGAGACTTT+TGG + chr2_3:11974219-11974238 Msa0278840:CDS 55.0%
CTTCTACTGGTGGCCCTACA+GGG + chr2_3:11974389-11974408 Msa0278840:CDS 55.0%
TTGACGGAGAAGGCCCTGTA+GGG - chr2_3:11974405-11974424 None:intergenic 55.0%
TTTGACGGAGAAGGCCCTGT+AGG - chr2_3:11974406-11974425 None:intergenic 55.0%
CCCCCTCGCAAGGTCTAATA+AGG - chr2_3:11974462-11974481 None:intergenic 55.0%
! GGAGTGTCCCTGAAGTTCTG+AGG + chr2_3:11974613-11974632 Msa0278840:CDS 55.0%
AGAGGGGCCTCAGAACTTCA+GGG - chr2_3:11974623-11974642 None:intergenic 55.0%
TAGAGGGGCCTCAGAACTTC+AGG - chr2_3:11974624-11974643 None:intergenic 55.0%
! GATGACGGTTGGTCGTTGCT+GGG + chr2_3:11975048-11975067 Msa0278840:CDS 55.0%
AGGTGGTGTCTTGTGTGCCA+AGG + chr2_3:11975164-11975183 Msa0278840:CDS 55.0%
TGCTCGATCGTAGGAGCAAG+AGG - chr2_3:11975470-11975489 None:intergenic 55.0%
TCCTACGATCGAGCACGAAG+AGG + chr2_3:11975475-11975494 Msa0278840:CDS 55.0%
ACCTCTTCGTGCTCGATCGT+AGG - chr2_3:11975479-11975498 None:intergenic 55.0%
! TGCATTGGTGCAGTTCCTGG+AGG + chr2_3:11975574-11975593 Msa0278840:intron 55.0%
CTCCCCAGAAGATGTTGCAC+TGG + chr2_3:11975622-11975641 Msa0278840:CDS 55.0%
CGTGCCAGTGCAACATCTTC+TGG - chr2_3:11975629-11975648 None:intergenic 55.0%
GAACCAGCACCTTCACCAGA+TGG - chr2_3:11976072-11976091 None:intergenic 55.0%
TTTGGCCCAAGCTGAGTACC+TGG - chr2_3:11976249-11976268 None:intergenic 55.0%
CTTGGGCCAAAGTCTCTTCC+TGG + chr2_3:11976258-11976277 Msa0278840:CDS 55.0%
GGCGAACCAGGAAGAGACTT+TGG - chr2_3:11976267-11976286 None:intergenic 55.0%
CGTGCCAAAGCATGAGCTTC+TGG - chr2_3:11976288-11976307 None:intergenic 55.0%
CAAGCATGTCTAGTCCAGCC+TGG - chr2_3:11976642-11976661 None:intergenic 55.0%
CTGGCAGAGATGCATAACCC+TGG - chr2_3:11976867-11976886 None:intergenic 55.0%
CAGGGTTATGCATCTCTGCC+AGG + chr2_3:11976865-11976884 Msa0278840:intron 55.0%
GGTTATGCATCTCTGCCAGG+AGG + chr2_3:11976868-11976887 Msa0278840:CDS 55.0%
TAGTCTTCTCGCCGTGGCTG+AGG + chr2_3:11973603-11973622 Msa0278840:intron 60.0%
CTACCGGAACTGCTGTCGAC+TGG + chr2_3:11973653-11973672 Msa0278840:CDS 60.0%
CACCCAGTCGACAGCAGTTC+CGG - chr2_3:11973659-11973678 None:intergenic 60.0%
CTCTAGACTCACAAGGCCGC+AGG - chr2_3:11973858-11973877 None:intergenic 60.0%
GCTTCTACTGGTGGCCCTAC+AGG + chr2_3:11974388-11974407 Msa0278840:CDS 60.0%
ATTAGACCTTGCGAGGGGGG+CGG + chr2_3:11974463-11974482 Msa0278840:CDS 60.0%
! CGATGACGGTTGGTCGTTGC+TGG + chr2_3:11975047-11975066 Msa0278840:CDS 60.0%
GCAGTTCCGTGTCCAAGACC+CGG + chr2_3:11975416-11975435 Msa0278840:CDS 60.0%
AAGCCACCGGGTCTTGGACA+CGG - chr2_3:11975425-11975444 None:intergenic 60.0%
! CGTCCATCTGGTGAAGGTGC+TGG + chr2_3:11976066-11976085 Msa0278840:CDS 60.0%
GCGCGACAATGTGGCTTCCA+TGG + chr2_3:11976155-11976174 Msa0278840:CDS 60.0%
ACGCACATACTGGCGAGCCA+TGG - chr2_3:11976175-11976194 None:intergenic 60.0%
CCATGGCAATTGCGCCCTCT+CGG + chr2_3:11976223-11976242 Msa0278840:CDS 60.0%
AGCTGAGTACCTGGCCGAGA+GGG - chr2_3:11976240-11976259 None:intergenic 60.0%
AAGCTGAGTACCTGGCCGAG+AGG - chr2_3:11976241-11976260 None:intergenic 60.0%
TCTCGGCCAGGTACTCAGCT+TGG + chr2_3:11976240-11976259 Msa0278840:CDS 60.0%
CTCGGCCAGGTACTCAGCTT+GGG + chr2_3:11976241-11976260 Msa0278840:CDS 60.0%
GCATGAGCTTCTGGCGAACC+AGG - chr2_3:11976279-11976298 None:intergenic 60.0%
TGCCAGGGTCTCCTCAGCCA+CGG - chr2_3:11973617-11973636 None:intergenic 65.0%
GTTCCGTGTCCAAGACCCGG+TGG + chr2_3:11975419-11975438 Msa0278840:CDS 65.0%
CTGGGAAAGCCACCGGGTCT+TGG - chr2_3:11975431-11975450 None:intergenic 65.0%
TGGCTGCTGGGAAAGCCACC+GGG - chr2_3:11975437-11975456 None:intergenic 65.0%
CTGGCTGCTGGGAAAGCCAC+CGG - chr2_3:11975438-11975457 None:intergenic 65.0%
! CCGAGAGGGCGCAATTGCCA+TGG - chr2_3:11976226-11976245 None:intergenic 65.0%
ATGGATCCGCCCCCCTCGCA+AGG - chr2_3:11974472-11974491 None:intergenic 70.0%
CGGTGGCTTTCCCAGCAGCC+AGG + chr2_3:11975436-11975455 Msa0278840:CDS 70.0%
GCAATTGCGCCCTCTCGGCC+AGG + chr2_3:11976228-11976247 Msa0278840:CDS 70.0%
CGCCGTGGCTGAGGAGACCC+TGG + chr2_3:11973612-11973631 Msa0278840:CDS 75.0%
! GGGATAGCGGCGCGAGCCTG+CGG + chr2_3:11973839-11973858 Msa0278840:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 11971911 11977270 11971911 ID=Msa0278840;Name=Msa0278840
chr2_3 mRNA 11971911 11977270 11971911 ID=Msa0278840-mRNA-1;Parent=Msa0278840;Name=Msa0278840-mRNA-1;_AED=0.13;_eAED=0.13;_QI=246|1|1|1|1|1|18|256|836
chr2_3 exon 11971911 11972353 11971911 ID=Msa0278840-mRNA-1:exon:5361;Parent=Msa0278840-mRNA-1
chr2_3 exon 11973076 11973235 11973076 ID=Msa0278840-mRNA-1:exon:5362;Parent=Msa0278840-mRNA-1
chr2_3 exon 11973391 11973503 11973391 ID=Msa0278840-mRNA-1:exon:5363;Parent=Msa0278840-mRNA-1
chr2_3 exon 11973606 11973696 11973606 ID=Msa0278840-mRNA-1:exon:5364;Parent=Msa0278840-mRNA-1
chr2_3 exon 11973791 11973886 11973791 ID=Msa0278840-mRNA-1:exon:5365;Parent=Msa0278840-mRNA-1
chr2_3 exon 11973982 11974095 11973982 ID=Msa0278840-mRNA-1:exon:5366;Parent=Msa0278840-mRNA-1
chr2_3 exon 11974200 11974283 11974200 ID=Msa0278840-mRNA-1:exon:5367;Parent=Msa0278840-mRNA-1
chr2_3 exon 11974367 11974522 11974367 ID=Msa0278840-mRNA-1:exon:5368;Parent=Msa0278840-mRNA-1
chr2_3 exon 11974609 11974683 11974609 ID=Msa0278840-mRNA-1:exon:5369;Parent=Msa0278840-mRNA-1
chr2_3 exon 11974763 11974869 11974763 ID=Msa0278840-mRNA-1:exon:5370;Parent=Msa0278840-mRNA-1
chr2_3 exon 11975017 11975203 11975017 ID=Msa0278840-mRNA-1:exon:5371;Parent=Msa0278840-mRNA-1
chr2_3 exon 11975308 11975496 11975308 ID=Msa0278840-mRNA-1:exon:5372;Parent=Msa0278840-mRNA-1
chr2_3 exon 11975587 11975667 11975587 ID=Msa0278840-mRNA-1:exon:5373;Parent=Msa0278840-mRNA-1
chr2_3 exon 11975773 11975907 11975773 ID=Msa0278840-mRNA-1:exon:5374;Parent=Msa0278840-mRNA-1
chr2_3 exon 11976012 11976328 11976012 ID=Msa0278840-mRNA-1:exon:5375;Parent=Msa0278840-mRNA-1
chr2_3 exon 11976418 11976529 11976418 ID=Msa0278840-mRNA-1:exon:5376;Parent=Msa0278840-mRNA-1
chr2_3 exon 11976613 11976762 11976613 ID=Msa0278840-mRNA-1:exon:5377;Parent=Msa0278840-mRNA-1
chr2_3 exon 11976868 11977270 11976868 ID=Msa0278840-mRNA-1:exon:5378;Parent=Msa0278840-mRNA-1
chr2_3 five_prime_UTR 11971911 11972156 11971911 ID=Msa0278840-mRNA-1:five_prime_utr;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11972157 11972353 11972157 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11973076 11973235 11973076 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11973391 11973503 11973391 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11973606 11973696 11973606 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11973791 11973886 11973791 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11973982 11974095 11973982 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11974200 11974283 11974200 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11974367 11974522 11974367 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11974609 11974683 11974609 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11974763 11974869 11974763 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11975017 11975203 11975017 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11975308 11975496 11975308 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11975587 11975667 11975587 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11975773 11975907 11975773 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11976012 11976328 11976012 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11976418 11976529 11976418 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11976613 11976762 11976613 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 CDS 11976868 11977014 11976868 ID=Msa0278840-mRNA-1:cds;Parent=Msa0278840-mRNA-1
chr2_3 three_prime_UTR 11977015 11977270 11977015 ID=Msa0278840-mRNA-1:three_prime_utr;Parent=Msa0278840-mRNA-1
Gene Sequence

>Msa0278840

ATGGCACTTTCTATGCATAAAGAAATGGATGCTGGTAAATATGTAAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATTAGAGAATGTCCTATCCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACCGAAGATGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACAGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTGATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATCTGGTGTATGAAAATGGATACATGAAGCAACAGATTCATACTGCTTCTGCTGCAACTACCACAGACAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTATCTAAGGCTACCGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGCATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCGGCGCGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGACTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTTCCCACTGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACTTTGGCTGCAGCACGAGACTTTTGGACACTGAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCGTTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCTCCGTCAAATTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTCCTTATTAGACCTTGCGAGGGGGGCGGATCCATTATTCATATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTCTATGAATCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACACATAAAACAGATAGCACAAGAATCCAGTGGAGAAATTCAGTATGGTGGCGGGCGCCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTCGATGACGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGACGTAACAATTGCTGTAAACTCGTCTCCAAACAAGTTTTTGGGGTCCAACTATTCATCAATGTTCCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTACTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGCGTTGATGCCTACTCTGCTACTTGTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTCCAAGACCCGGTGGCTTTCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCACGAAGAGTTCCTGGAGGTAGTTCGTATAGAGGGACATGCATTCTCCCCAGAAGATGTTGCACTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAATTGGAGCATGTGCTCAACTTGTGTTTGCCCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTATTGCCTTCTGGTTTTCGAGTTATTCCCTTGGATCCTAAATCAGACGGTCCAACCACATCAAGAACATTGGATTTACTTGAAGGATCTAGTAATGCTCGTCCATCTGGTGAAGGTGCTGGTTCAAACGGATACAACCTTAGGTCGGTCCTTACAATTGCATTCCAATTTACCTTTGAGAATCACTTGCGCGACAATGTGGCTTCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGCATCAGTTCAGAGGGTTGCCATGGCAATTGCGCCCTCTCGGCCAGGTACTCAGCTTGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTGGCACGATGGATATCTAGAAGCTACAGGATGCACACTGGTGCCGAGCTTTTTAGAGTTGAGTCCGCAGCGAGTGATGCAATATTGAGACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGTAAAAACAAATGCATCTCCAATATTCACCTTTTCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGGTTATGCATCTCTGCCAGGAGGGATTTGTGTATCAAGTATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGATGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA
Protein sequence

>Msa0278840

MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDENSIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDLLEGSSNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILRQLWHHSDAIMCCSVKTNASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV*