Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058320 | XP_013466096.2 | 97.819 | 642 | 13 | 1 | 1 | 641 | 1 | 642 | 0.0 | 1308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058320 | sp|Q8RXN5|TYW1_ARATH | 72.100 | 638 | 166 | 5 | 4 | 633 | 5 | 638 | 0.0 | 948 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058320 | A0A396JJV0 | 97.819 | 642 | 13 | 1 | 1 | 641 | 1 | 642 | 0.0 | 1308 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003610 | Msa0058320 | 0.922985 | 4.812551e-89 | -8.615850e-47 |
| Msa0058320 | Msa0137130 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
| Msa0058320 | Msa0145760 | 0.899386 | 2.086938e-77 | -8.615850e-47 |
| Msa0058320 | Msa0229230 | 0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0058320 | Msa1152120 | 0.806323 | 8.697089e-50 | -8.615850e-47 |
| Msa0058320 | Msa1276830 | 0.810837 | 9.449858e-51 | -8.615850e-47 |
| Msa0058320 | Msa1402610 | 0.810098 | 1.364798e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058320 | MtrunA17_Chr1g0155111 | 97.819 | 642 | 13 | 1 | 1 | 641 | 1 | 642 | 0.0 | 1308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058320 | AT1G75200.1 | 72.100 | 638 | 166 | 5 | 4 | 633 | 5 | 638 | 0.0 | 948 |
Find 220 sgRNAs with CRISPR-Local
Find 586 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGGTTAGGGTTGGGGTTT+TGG | 0.092746 | 1_2:-14643255 | None:intergenic |
| TCCTGTTATTAGAGCAAATT+TGG | 0.158620 | 1_2:+14643939 | Msa0058320:CDS |
| GACCACTCTTTGGAGATTTC+TGG | 0.166707 | 1_2:+14649270 | Msa0058320:CDS |
| TTGCTAGCATAGTAGTATTT+TGG | 0.231265 | 1_2:+14650586 | Msa0058320:three_prime_UTR |
| ATTTAAATTCAGGTGGCTTC+TGG | 0.249615 | 1_2:+14650105 | Msa0058320:intron |
| AGTGCTGTTTAGTGGGCTTT+AGG | 0.252834 | 1_2:-14643010 | None:intergenic |
| TTGCAGGGTTATAAGATTAT+TGG | 0.257743 | 1_2:+14644498 | Msa0058320:intron |
| TTTATCTCTGGATACATAAT+AGG | 0.262090 | 1_2:-14649014 | None:intergenic |
| ACCAAATTTGCTCTAATAAC+AGG | 0.278071 | 1_2:-14643940 | None:intergenic |
| GCAGAATTCACGATCTCTAT+TGG | 0.280496 | 1_2:-14645263 | None:intergenic |
| CGTTTCCTTGGGGAGATCTT+CGG | 0.282190 | 1_2:-14643392 | None:intergenic |
| ACACCATCCTGGGCCGTCTA+TGG | 0.292318 | 1_2:+14650162 | Msa0058320:CDS |
| TTTCCTCAATTGCCTCGAAT+TGG | 0.309958 | 1_2:-14650425 | None:intergenic |
| TTTCTTTATTGTGTAACTAT+AGG | 0.318590 | 1_2:+14650311 | Msa0058320:three_prime_UTR |
| AACCTCAAAACCTGGGTAAT+AGG | 0.319156 | 1_2:-14649125 | None:intergenic |
| GTTTCCTTGGGGAGATCTTC+GGG | 0.325569 | 1_2:-14643391 | None:intergenic |
| AAGTGTAGATTTGCGGTATT+CGG | 0.326741 | 1_2:+14643535 | Msa0058320:CDS |
| TTTACGGAATTGAGAGTCAT+AGG | 0.364405 | 1_2:+14644598 | Msa0058320:CDS |
| CTTCCTCGAAGGTGCTTTAC+CGG | 0.369795 | 1_2:-14643857 | None:intergenic |
| CCCTTGATTTCAATGAAGTC+GGG | 0.372694 | 1_2:-14649688 | None:intergenic |
| CAGGTTAGAAGTTAGGCCTT+TGG | 0.372783 | 1_2:+14650262 | Msa0058320:exon |
| ACCACTCTTTGGAGATTTCT+GGG | 0.373617 | 1_2:+14649271 | Msa0058320:CDS |
| CTTAAGAGAGTCCTTTGTTC+CGG | 0.374790 | 1_2:-14649237 | None:intergenic |
| ACTAAGAAGTTCAAAATTGA+TGG | 0.376599 | 1_2:+14649969 | Msa0058320:CDS |
| TGTTGATGATGGTGGTGATT+TGG | 0.380928 | 1_2:+14643735 | Msa0058320:CDS |
| TCCTTATCGTTGCTTCCACT+TGG | 0.382287 | 1_2:+14643419 | Msa0058320:CDS |
| TTCCTCAATTGCCTCGAATT+GGG | 0.383627 | 1_2:-14650424 | None:intergenic |
| TAAAGAAATGAAAGGGGAAA+TGG | 0.383908 | 1_2:-14650296 | None:intergenic |
| AGGTTAGAAGTTAGGCCTTT+GGG | 0.386484 | 1_2:+14650263 | Msa0058320:exon |
| AAGTCGAGCCGCAAAGAATC+AGG | 0.393504 | 1_2:+14650243 | Msa0058320:CDS |
| ATCCAGGACAGTTGAGATAT+AGG | 0.397266 | 1_2:+14650205 | Msa0058320:CDS |
| GAGGCGGTTAGAGAGGGTTT+TGG | 0.398722 | 1_2:-14643308 | None:intergenic |
| CCAGGCCGTAACAAAACAAC+CGG | 0.404763 | 1_2:+14642971 | Msa0058320:five_prime_UTR |
| GTATTACAACATATTTCAAT+AGG | 0.405724 | 1_2:+14650333 | Msa0058320:three_prime_UTR |
| TATTATAAACTCTTCAGTAT+TGG | 0.406516 | 1_2:+14649661 | Msa0058320:CDS |
| GTTGATCTTGAAGATATTGC+CGG | 0.412171 | 1_2:+14643838 | Msa0058320:CDS |
| ACTTCTAACCTGATTCTTTG+CGG | 0.414058 | 1_2:-14650251 | None:intergenic |
| GATAAGGAGAAGCGTTTCCT+TGG | 0.416520 | 1_2:-14643404 | None:intergenic |
| TACACAATAAAGAAATGAAA+GGG | 0.418933 | 1_2:-14650303 | None:intergenic |
| TTGTGGATGAGTTGCACAAA+AGG | 0.421585 | 1_2:+14649042 | Msa0058320:CDS |
| TAGAGCAAATTTGGTGAAGC+AGG | 0.424165 | 1_2:+14643948 | Msa0058320:CDS |
| GCGGTATTCGGTGTCGGTAG+TGG | 0.425958 | 1_2:+14643547 | Msa0058320:CDS |
| TGCATTTGTAACTAGAAAAG+TGG | 0.426329 | 1_2:-14649072 | None:intergenic |
| CTATGATAAATTTCATGATC+TGG | 0.430965 | 1_2:+14650013 | Msa0058320:CDS |
| TACGGCCTGGTGGGCTTTAG+CGG | 0.431109 | 1_2:-14642958 | None:intergenic |
| GCAATCGATAGACCACTCTT+TGG | 0.431413 | 1_2:+14649260 | Msa0058320:CDS |
| GTTGCTGAAGCCTATTACCC+AGG | 0.436691 | 1_2:+14649115 | Msa0058320:CDS |
| GTTTAATCATATTTGTATGC+TGG | 0.437012 | 1_2:-14645292 | None:intergenic |
| CATTGTGCATTATCTCTTGT+TGG | 0.437204 | 1_2:+14648987 | Msa0058320:CDS |
| ACATGGCTGCCACACCATCC+TGG | 0.438997 | 1_2:+14650151 | Msa0058320:CDS |
| CGATTGGCTTGCGGAGAGTT+CGG | 0.440051 | 1_2:+14643480 | Msa0058320:CDS |
| CCTCGAATTGGGAAAACATT+GGG | 0.442699 | 1_2:-14650413 | None:intergenic |
| ATAAGGAGAAGCGTTTCCTT+GGG | 0.442770 | 1_2:-14643403 | None:intergenic |
| GGATTTGTAGAAGAAGTAGA+AGG | 0.443145 | 1_2:-14643194 | None:intergenic |
| TCCACAAGTGTATTTATCTC+TGG | 0.443802 | 1_2:-14649026 | None:intergenic |
| CGGAACAAAGGACTCTCTTA+AGG | 0.444253 | 1_2:+14649238 | Msa0058320:CDS |
| AGTATAAATTCTTCGCCGAT+TGG | 0.444572 | 1_2:+14643464 | Msa0058320:CDS |
| AAACAAATGAAAGGAGTTCC+TGG | 0.444665 | 1_2:+14645311 | Msa0058320:CDS |
| CAAATCCAGTAGCGAAAAGT+TGG | 0.447385 | 1_2:+14645222 | Msa0058320:CDS |
| TTCCTATATCTCAACTGTCC+TGG | 0.455066 | 1_2:-14650207 | None:intergenic |
| TTATTTGCACATGCCAAGCT+AGG | 0.467055 | 1_2:-14645173 | None:intergenic |
| TAATACAATGCTTTAGACAT+AGG | 0.470953 | 1_2:+14650365 | Msa0058320:three_prime_UTR |
| GAGAGTAATGGGAAGTTGAA+TGG | 0.471230 | 1_2:+14643898 | Msa0058320:CDS |
| TTGAAGAGAGGTAGATAAAG+TGG | 0.472489 | 1_2:+14650610 | Msa0058320:three_prime_UTR |
| TCCATCCTTTCACAAGGGTC+AGG | 0.473152 | 1_2:-14649618 | None:intergenic |
| TGCCGACGTGAAAGCTTTCT+CGG | 0.477548 | 1_2:+14649866 | Msa0058320:CDS |
| GCGAGGAGTGTGAGACGAGC+TGG | 0.480350 | 1_2:-14643154 | None:intergenic |
| CTACGGTGAAGGAGAGTAAT+GGG | 0.482227 | 1_2:+14643887 | Msa0058320:CDS |
| AAGTGGTGTGGGAAGGTTGT+TGG | 0.484900 | 1_2:+14643700 | Msa0058320:CDS |
| ACCCGACTTCATTGAAATCA+AGG | 0.485531 | 1_2:+14649687 | Msa0058320:CDS |
| TGATGGTGGTGAGGTGGATG+AGG | 0.488135 | 1_2:+14643669 | Msa0058320:CDS |
| GAAGAGGGAGTGCTGTTTAG+TGG | 0.490851 | 1_2:-14643018 | None:intergenic |
| CATGGAGGCAACCCCTAGCT+TGG | 0.491145 | 1_2:+14645160 | Msa0058320:CDS |
| GTAGAAGAAGTAGAAGGTTG+TGG | 0.494820 | 1_2:-14643188 | None:intergenic |
| GGTGAGAATTTCAATGCGGT+TGG | 0.495729 | 1_2:+14643577 | Msa0058320:CDS |
| GTTGAATGGAAAGAAAGAAA+TGG | 0.495731 | 1_2:+14643912 | Msa0058320:CDS |
| ATCAAGGGTGTTACATATTG+TGG | 0.497705 | 1_2:+14649703 | Msa0058320:CDS |
| ACCCTTGATTTCAATGAAGT+CGG | 0.497934 | 1_2:-14649689 | None:intergenic |
| CATGGCTGCCACACCATCCT+GGG | 0.498661 | 1_2:+14650152 | Msa0058320:CDS |
| AAAGAATCAGGTTAGAAGTT+AGG | 0.499260 | 1_2:+14650255 | Msa0058320:exon |
| TTCGAGGAAGCTGGTGGCTA+CGG | 0.500414 | 1_2:+14643870 | Msa0058320:CDS |
| AGAGTCTGATGAGGAGGAAG+AGG | 0.501593 | 1_2:+14643801 | Msa0058320:CDS |
| CAGCATTCCATCCTTTCACA+AGG | 0.501696 | 1_2:-14649624 | None:intergenic |
| GAAAAGTTGGGTGTGGGAGA+TGG | 0.507932 | 1_2:+14645235 | Msa0058320:CDS |
| CCCAAGTGGAAGCAACGATA+AGG | 0.508085 | 1_2:-14643420 | None:intergenic |
| GAATTTCAATGCGGTTGGTA+AGG | 0.508915 | 1_2:+14643582 | Msa0058320:CDS |
| GCCTCGAATTGGGAAAACAT+TGG | 0.510673 | 1_2:-14650414 | None:intergenic |
| TTCCCAATTCGAGGCAATTG+AGG | 0.514152 | 1_2:+14650422 | Msa0058320:three_prime_UTR |
| TATTTGCACATGCCAAGCTA+GGG | 0.514611 | 1_2:-14645172 | None:intergenic |
| TCACTCGTGTTGTGTCCTCT+TGG | 0.516638 | 1_2:+14649941 | Msa0058320:CDS |
| GGATTCCTTGACTGCTCTGA+AGG | 0.516788 | 1_2:+14649570 | Msa0058320:intron |
| GCGGTGGAAAACGCCGTGGG+AGG | 0.517098 | 1_2:-14643053 | None:intergenic |
| TGAGGAGGAAGAGGCGGAGT+CGG | 0.518460 | 1_2:+14643810 | Msa0058320:CDS |
| GGTAACGAGATGATTCCGTT+GGG | 0.519802 | 1_2:+14643634 | Msa0058320:CDS |
| GAGGAAGGTGGATTTGATCC+AGG | 0.523501 | 1_2:+14650189 | Msa0058320:CDS |
| AGGTGAGGAAACGGTGGAGG+CGG | 0.524499 | 1_2:-14643324 | None:intergenic |
| CGGTGGAAAACGCCGTGGGA+GGG | 0.526313 | 1_2:-14643052 | None:intergenic |
| TGTGAGTGTGAGTGTGGCGG+TGG | 0.528582 | 1_2:-14643069 | None:intergenic |
| CAGTAGCGAAAAGTTGGGTG+TGG | 0.532702 | 1_2:+14645228 | Msa0058320:CDS |
| TAAAGCACCTTCGAGGAAGC+TGG | 0.534689 | 1_2:+14643861 | Msa0058320:CDS |
| GGTGTCGGTAGTGGAGGTTA+TGG | 0.534919 | 1_2:+14643556 | Msa0058320:CDS |
| CTCAGCTCCATAGACGGCCC+AGG | 0.535554 | 1_2:-14650169 | None:intergenic |
| GGTTGTTTGAGGTGAGGAAA+CGG | 0.535614 | 1_2:-14643333 | None:intergenic |
| GTCGAATGCAAGGTTGTTTG+AGG | 0.536695 | 1_2:-14643344 | None:intergenic |
| TTTGTCGAAGTGTAGATTTG+CGG | 0.536931 | 1_2:+14643528 | Msa0058320:CDS |
| AAGTCACAGCTTCGAGGTCG+AGG | 0.539284 | 1_2:+14644555 | Msa0058320:CDS |
| ATGAAAGGGGAAATGGATGT+TGG | 0.539507 | 1_2:-14650289 | None:intergenic |
| TTGATGGCCAGTGGTATACA+TGG | 0.541192 | 1_2:+14649985 | Msa0058320:CDS |
| GTTGCTTCCACTTGGGAAGA+CGG | 0.542672 | 1_2:+14643427 | Msa0058320:CDS |
| TTGAGGTGAGGAAACGGTGG+AGG | 0.544628 | 1_2:-14643327 | None:intergenic |
| ATTCTTCGCCGATTGGCTTG+CGG | 0.545441 | 1_2:+14643471 | Msa0058320:CDS |
| CTCTGTCTCTGAAAAGCCAA+GGG | 0.546175 | 1_2:+14649892 | Msa0058320:CDS |
| AAGAGGGAGTGCTGTTTAGT+GGG | 0.548000 | 1_2:-14643017 | None:intergenic |
| AGGAGATGTTGATGGTGGTG+AGG | 0.548049 | 1_2:+14643660 | Msa0058320:CDS |
| TGTTGGTTTGAGAAATGAAG+AGG | 0.549143 | 1_2:-14643282 | None:intergenic |
| GCTTTCACGTCGGCATGCCA+AGG | 0.550330 | 1_2:-14649858 | None:intergenic |
| GAAGCTGGTGGCTACGGTGA+AGG | 0.550823 | 1_2:+14643876 | Msa0058320:CDS |
| GTGAAACGGATGAAGGCGTT+GGG | 0.552770 | 1_2:+14643610 | Msa0058320:CDS |
| GCCTGACCCTTGTGAAAGGA+TGG | 0.553096 | 1_2:+14649617 | Msa0058320:CDS |
| TGAAGAAGAGTCTGATGAGG+AGG | 0.553756 | 1_2:+14643795 | Msa0058320:CDS |
| CGAACTCTCCGCAAGCCAAT+CGG | 0.555358 | 1_2:-14643479 | None:intergenic |
| TTACACAATAAAGAAATGAA+AGG | 0.555394 | 1_2:-14650304 | None:intergenic |
| TGATGAGAATGGCATGGTAA+TGG | 0.555473 | 1_2:-14643128 | None:intergenic |
| ACGCAATGCTATTTATTGCA+AGG | 0.558732 | 1_2:-14650541 | None:intergenic |
| TGGACTAAGTCACAGCTTCG+AGG | 0.559406 | 1_2:+14644549 | Msa0058320:CDS |
| AGGCAACTTCATACTCCCCT+TGG | 0.560657 | 1_2:-14649908 | None:intergenic |
| AACGGTGGAGGCGGTTAGAG+AGG | 0.565434 | 1_2:-14643315 | None:intergenic |
| CCTTATCGTTGCTTCCACTT+GGG | 0.567188 | 1_2:+14643420 | Msa0058320:CDS |
| GTCTGATGAGGAGGAAGAGG+CGG | 0.567189 | 1_2:+14643804 | Msa0058320:CDS |
| TGCTACATCAAAATTAACAA+TGG | 0.568819 | 1_2:+14649827 | Msa0058320:CDS |
| GGAGATTGTGAAACGGATGA+AGG | 0.571123 | 1_2:+14643603 | Msa0058320:CDS |
| TAACAATGGAAAATGTCCCT+TGG | 0.571608 | 1_2:+14649841 | Msa0058320:CDS |
| CGAGCTGGTACTGATGAGAA+TGG | 0.571729 | 1_2:-14643139 | None:intergenic |
| AGTCTATCCATGTATACCAC+TGG | 0.572314 | 1_2:-14649992 | None:intergenic |
| GCTCTGTCTCTGAAAAGCCA+AGG | 0.575623 | 1_2:+14649891 | Msa0058320:CDS |
| TCCAGAGATAAATACACTTG+TGG | 0.576447 | 1_2:+14649025 | Msa0058320:CDS |
| TCAGGCGGTATACAGTGCGC+TGG | 0.577014 | 1_2:-14649600 | None:intergenic |
| ACGGTGGAGGCGGTTAGAGA+GGG | 0.577423 | 1_2:-14643314 | None:intergenic |
| GCTACGGTGAAGGAGAGTAA+TGG | 0.579239 | 1_2:+14643886 | Msa0058320:CDS |
| TGGTAATGGTGATTCGATGA+TGG | 0.579437 | 1_2:-14643114 | None:intergenic |
| TGGTAACGAGATGATTCCGT+TGG | 0.580232 | 1_2:+14643633 | Msa0058320:CDS |
| AGATGTTGATGGTGGTGAGG+TGG | 0.580983 | 1_2:+14643663 | Msa0058320:CDS |
| GCCGTCTATGGAGCTGAGGA+AGG | 0.583318 | 1_2:+14650174 | Msa0058320:CDS |
| TGGATGAGTTGCACAAAAGG+AGG | 0.584833 | 1_2:+14649045 | Msa0058320:CDS |
| AAATCCAGTAGCGAAAAGTT+GGG | 0.586529 | 1_2:+14645223 | Msa0058320:CDS |
| TTGCCGGTAAAGCACCTTCG+AGG | 0.590223 | 1_2:+14643854 | Msa0058320:CDS |
| AAGAATTTATACTCCGGCGG+TGG | 0.594684 | 1_2:-14643454 | None:intergenic |
| CAGTGTAGATGCCGGAACAA+AGG | 0.595194 | 1_2:+14649226 | Msa0058320:CDS |
| AATATGATTAAACAAATGAA+AGG | 0.595549 | 1_2:+14645302 | Msa0058320:CDS |
| GTGGTGTCAAGATTTGTAGA+TGG | 0.595777 | 1_2:+14644529 | Msa0058320:CDS |
| GAAGAAGTAGAAGGTTGTGG+CGG | 0.596045 | 1_2:-14643185 | None:intergenic |
| AGGGAAAATGAAAACGAAGA+GGG | 0.597802 | 1_2:-14643033 | None:intergenic |
| AGATTTGCGGTATTCGGTGT+CGG | 0.597906 | 1_2:+14643541 | Msa0058320:CDS |
| GCAGACCGCTAAAGCCCACC+AGG | 0.598724 | 1_2:+14642953 | Msa0058320:five_prime_UTR |
| TGATGAAGAAGAGTCTGATG+AGG | 0.598927 | 1_2:+14643792 | Msa0058320:CDS |
| TGTGAAACGGATGAAGGCGT+TGG | 0.600791 | 1_2:+14643609 | Msa0058320:CDS |
| ACACGAGTGAACATGCTCAC+AGG | 0.600820 | 1_2:-14649928 | None:intergenic |
| ATCCTTTCACAAGGGTCAGG+CGG | 0.604119 | 1_2:-14649615 | None:intergenic |
| ACATTGGGACTTAAATACAC+TGG | 0.604849 | 1_2:-14650398 | None:intergenic |
| GTCTATGGAGCTGAGGAAGG+TGG | 0.604936 | 1_2:+14650177 | Msa0058320:CDS |
| ATGCAAGGTTGTTTGAGGTG+AGG | 0.606431 | 1_2:-14643339 | None:intergenic |
| CTTTCACGTCGGCATGCCAA+GGG | 0.607070 | 1_2:-14649857 | None:intergenic |
| TTATATGTCAGTGTAGATGC+CGG | 0.607545 | 1_2:+14649218 | Msa0058320:CDS |
| TGTTTGAGGTGAGGAAACGG+TGG | 0.612358 | 1_2:-14643330 | None:intergenic |
| CCCGACTTCATTGAAATCAA+GGG | 0.615860 | 1_2:+14649688 | Msa0058320:CDS |
| ACCTCGGAGCGATTAACTGA+AGG | 0.618092 | 1_2:+14648951 | Msa0058320:CDS |
| CTTGCATTCGACATCATCGA+TGG | 0.618944 | 1_2:+14643355 | Msa0058320:CDS |
| GCTCCATAGACGGCCCAGGA+TGG | 0.619796 | 1_2:-14650165 | None:intergenic |
| TCCCAGAAATCTCCAAAGAG+TGG | 0.620464 | 1_2:-14649272 | None:intergenic |
| GGGGAAGGAGATGTTGATGG+TGG | 0.624176 | 1_2:+14643655 | Msa0058320:CDS |
| ATACTGAAAGGTGTTGATGA+TGG | 0.624454 | 1_2:+14643724 | Msa0058320:CDS |
| AGTAGCGAAAAGTTGGGTGT+GGG | 0.624662 | 1_2:+14645229 | Msa0058320:CDS |
| CTGGGCCGTCTATGGAGCTG+AGG | 0.625153 | 1_2:+14650170 | Msa0058320:CDS |
| TAACGAGATGATTCCGTTGG+GGG | 0.625747 | 1_2:+14643636 | Msa0058320:CDS |
| TTGTGGCGGAGAAGAGAGCG+AGG | 0.627299 | 1_2:-14643171 | None:intergenic |
| GTAGCCACCAGCTTCCTCGA+AGG | 0.629332 | 1_2:-14643868 | None:intergenic |
| AAGATTATTGGTTCACACAG+TGG | 0.629945 | 1_2:+14644510 | Msa0058320:CDS |
| ACCTTCCTCAGCTCCATAGA+CGG | 0.630071 | 1_2:-14650175 | None:intergenic |
| TTGGTAAGGAGATTGTGAAA+CGG | 0.632862 | 1_2:+14643596 | Msa0058320:CDS |
| AATGGATGTTGGCTACCCAA+AGG | 0.633448 | 1_2:-14650278 | None:intergenic |
| ATAGACGGCCCAGGATGGTG+TGG | 0.635119 | 1_2:-14650160 | None:intergenic |
| GTGGCGGTGGAAAACGCCGT+GGG | 0.635617 | 1_2:-14643056 | None:intergenic |
| TTGGCTTGCGGAGAGTTCGG+AGG | 0.639532 | 1_2:+14643483 | Msa0058320:CDS |
| TACCGCCTGACCCTTGTGAA+AGG | 0.639713 | 1_2:+14649613 | Msa0058320:CDS |
| ATTTGCACATGCCAAGCTAG+GGG | 0.639964 | 1_2:-14645171 | None:intergenic |
| AGTTCAAAATTGATGGCCAG+TGG | 0.640034 | 1_2:+14649976 | Msa0058320:CDS |
| CTGAAAGGTGTTGATGATGG+TGG | 0.640774 | 1_2:+14643727 | Msa0058320:CDS |
| TGATTTGGAGAATGCTGAGG+AGG | 0.642559 | 1_2:+14643750 | Msa0058320:CDS |
| TTATGAGTGAAATAGGTGCA+TGG | 0.642687 | 1_2:+14645142 | Msa0058320:intron |
| GTATTCGGTGTCGGTAGTGG+AGG | 0.643075 | 1_2:+14643550 | Msa0058320:CDS |
| GCGTCGTGTGAGTGTGAGTG+TGG | 0.644405 | 1_2:-14643075 | None:intergenic |
| TAAGGAGAAGCGTTTCCTTG+GGG | 0.648137 | 1_2:-14643402 | None:intergenic |
| AGAGATAATGCACAATGCCG+TGG | 0.654133 | 1_2:-14648981 | None:intergenic |
| GTAACGAGATGATTCCGTTG+GGG | 0.654757 | 1_2:+14643635 | Msa0058320:CDS |
| AGCATTCCATCCTTTCACAA+GGG | 0.657631 | 1_2:-14649623 | None:intergenic |
| GGAAGACGGAAAACCACCGC+CGG | 0.657646 | 1_2:+14643441 | Msa0058320:CDS |
| GAGAATGCTGAGGAGGAAAG+CGG | 0.660819 | 1_2:+14643757 | Msa0058320:CDS |
| ACACAATAAAGAAATGAAAG+GGG | 0.662501 | 1_2:-14650302 | None:intergenic |
| TCACAGCTTCGAGGTCGAGG+TGG | 0.662705 | 1_2:+14644558 | Msa0058320:CDS |
| CATCGATGATGTCGAATGCA+AGG | 0.667846 | 1_2:-14643354 | None:intergenic |
| GAGGGAAAATGAAAACGAAG+AGG | 0.674701 | 1_2:-14643034 | None:intergenic |
| TAATGGTGATTCGATGATGG+TGG | 0.675556 | 1_2:-14643111 | None:intergenic |
| AGCACCTTCGAGGAAGCTGG+TGG | 0.676170 | 1_2:+14643864 | Msa0058320:CDS |
| CTCCGAGAAAGCTTTCACGT+CGG | 0.679985 | 1_2:-14649868 | None:intergenic |
| AAGGTTGTTGGAATACTGAA+AGG | 0.681691 | 1_2:+14643712 | Msa0058320:CDS |
| TCGGCGAAGAATTTATACTC+CGG | 0.685809 | 1_2:-14643460 | None:intergenic |
| GCGAAGAATTTATACTCCGG+CGG | 0.686331 | 1_2:-14643457 | None:intergenic |
| TAACTGAAGGCATGACACCA+CGG | 0.686690 | 1_2:+14648964 | Msa0058320:CDS |
| CAGGCCGTAACAAAACAACC+GGG | 0.688377 | 1_2:+14642972 | Msa0058320:five_prime_UTR |
| AAACGGATGAAGGCGTTGGG+TGG | 0.695210 | 1_2:+14643613 | Msa0058320:CDS |
| TGTGGCGGTGGAAAACGCCG+TGG | 0.697324 | 1_2:-14643057 | None:intergenic |
| TGGTACTGATGAGAATGGCA+TGG | 0.701260 | 1_2:-14643134 | None:intergenic |
| TGGTGATTTGGAGAATGCTG+AGG | 0.702453 | 1_2:+14643747 | Msa0058320:CDS |
| TCGTGTGAGTGTGAGTGTGG+CGG | 0.704063 | 1_2:-14643072 | None:intergenic |
| GCCTTCAGTTAATCGCTCCG+AGG | 0.710873 | 1_2:-14648952 | None:intergenic |
| CGAACCCGAAGATCTCCCCA+AGG | 0.723663 | 1_2:+14643387 | Msa0058320:CDS |
| CGACGTGAAAGCTTTCTCGG+AGG | 0.740056 | 1_2:+14649869 | Msa0058320:CDS |
| TCTGTCTCTGAAAAGCCAAG+GGG | 0.741241 | 1_2:+14649893 | Msa0058320:CDS |
| TGAGTGAAATAGGTGCATGG+AGG | 0.759000 | 1_2:+14645145 | Msa0058320:intron |
| TTATGGTGAGAATTTCAATG+CGG | 0.771681 | 1_2:+14643573 | Msa0058320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAATTTTTAATTAAAA+AGG | + | chr1_2:14646581-14646600 | Msa0058320:intron | 0.0% |
| !!! | TTTTTTTTTGCTTATAATTT+GGG | - | chr1_2:14647137-14647156 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGCTTATAATT+TGG | - | chr1_2:14647138-14647157 | None:intergenic | 10.0% |
| !!! | ATTTTTAATATATTTGTTGT+TGG | + | chr1_2:14647554-14647573 | Msa0058320:intron | 10.0% |
| !! | TTCTTAATAATATACTTAAA+TGG | - | chr1_2:14648080-14648099 | None:intergenic | 10.0% |
| !!! | AGAAAATATTTTTTTTTATG+GGG | + | chr1_2:14648593-14648612 | Msa0058320:intron | 10.0% |
| !! | AATATGATTAAACAAATGAA+AGG | + | chr1_2:14645302-14645321 | Msa0058320:CDS | 15.0% |
| !! | AAAGAAAATATAAAATTACC+AGG | - | chr1_2:14645332-14645351 | None:intergenic | 15.0% |
| !! | TGATGAATATAATCAAATAA+AGG | - | chr1_2:14645626-14645645 | None:intergenic | 15.0% |
| !! | AAAACTAAAACATAAGAATT+TGG | + | chr1_2:14647174-14647193 | Msa0058320:intron | 15.0% |
| !! | GTTTATTCTCATAAAATTAA+AGG | - | chr1_2:14647311-14647330 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTGCTTATATTA+TGG | + | chr1_2:14647425-14647444 | Msa0058320:intron | 15.0% |
| !!! | GTTTTTTTTGCTTATATTAT+GGG | + | chr1_2:14647426-14647445 | Msa0058320:intron | 15.0% |
| !! | TTTAGGTAAACAATAATTAT+TGG | + | chr1_2:14647717-14647736 | Msa0058320:intron | 15.0% |
| !!! | GAATAATAAGAAAATGTTTT+TGG | + | chr1_2:14648549-14648568 | Msa0058320:intron | 15.0% |
| !!! | CATATAATTAGTTTCAAAAT+TGG | + | chr1_2:14648902-14648921 | Msa0058320:intron | 15.0% |
| !! | TTTATCATCAATTTAAATTC+AGG | + | chr1_2:14650095-14650114 | Msa0058320:intron | 15.0% |
| !!! | TTAAAATATTATCGATTTGC+AGG | + | chr1_2:14644482-14644501 | Msa0058320:intron | 20.0% |
| !!! | TAAAATATTATCGATTTGCA+GGG | + | chr1_2:14644483-14644502 | Msa0058320:intron | 20.0% |
| !! | AATAAGTTTGTAAAGTAATC+AGG | + | chr1_2:14644878-14644897 | Msa0058320:intron | 20.0% |
| !!! | GGTTTTAGTAAGTATTTTTT+TGG | + | chr1_2:14645038-14645057 | Msa0058320:intron | 20.0% |
| !! | TTTAAGGGAAAAATAAATGA+GGG | + | chr1_2:14645533-14645552 | Msa0058320:intron | 20.0% |
| !! | ATAAATGATGATCTCATAAT+AGG | - | chr1_2:14645603-14645622 | None:intergenic | 20.0% |
| !!! | ACAAGATATTTTTTTTCAAC+TGG | - | chr1_2:14645670-14645689 | None:intergenic | 20.0% |
| !!! | TTTTTGATGCAAATCAAAAT+AGG | - | chr1_2:14646438-14646457 | Msa0058330:CDS | 20.0% |
| !!! | TTCTTTGGAAAAAGTTTTAT+AGG | + | chr1_2:14647213-14647232 | Msa0058320:intron | 20.0% |
| !!! | GATGTAAAAACAATTTTCAT+TGG | + | chr1_2:14647238-14647257 | Msa0058320:intron | 20.0% |
| !!! | GAATAAACAAAAGTTTTTCT+TGG | + | chr1_2:14647323-14647342 | Msa0058320:intron | 20.0% |
| !!! | TGTCTTTTTTGCTTATATTT+TGG | + | chr1_2:14647389-14647408 | Msa0058320:intron | 20.0% |
| !!! | GTCTTTTTTGCTTATATTTT+GGG | + | chr1_2:14647390-14647409 | Msa0058320:intron | 20.0% |
| !! | AAAATGCTCAAAATTATTTG+AGG | - | chr1_2:14647539-14647558 | None:intergenic | 20.0% |
| !!! | TGTTCTTCAATTAATGTTTT+AGG | + | chr1_2:14647700-14647719 | Msa0058320:intron | 20.0% |
| !!! | TAAACCATTGACATTTTATT+TGG | - | chr1_2:14647765-14647784 | None:intergenic | 20.0% |
| !! | AAATAAAATGTCAATGGTTT+AGG | + | chr1_2:14647764-14647783 | Msa0058320:intron | 20.0% |
| !! | ATTGAAAACAAAAAGAAACA+AGG | - | chr1_2:14648477-14648496 | None:intergenic | 20.0% |
| !! | GGAAAACGATATTATAAAAT+GGG | - | chr1_2:14648765-14648784 | None:intergenic | 20.0% |
| !! | TGGAAAACGATATTATAAAA+TGG | - | chr1_2:14648766-14648785 | None:intergenic | 20.0% |
| !!! | TATAATATCGTTTTCCATAT+TGG | + | chr1_2:14648769-14648788 | Msa0058320:intron | 20.0% |
| !! | TATCAGTCAAAATGATATAA+CGG | - | chr1_2:14648846-14648865 | None:intergenic | 20.0% |
| !!! | ATTTTATAATTTGAACATGC+TGG | + | chr1_2:14649154-14649173 | Msa0058320:intron | 20.0% |
| !! | TATTATAAACTCTTCAGTAT+TGG | + | chr1_2:14649661-14649680 | Msa0058320:CDS | 20.0% |
| !! | TACACAATAAAGAAATGAAA+GGG | - | chr1_2:14650306-14650325 | None:intergenic | 20.0% |
| !! | TTACACAATAAAGAAATGAA+AGG | - | chr1_2:14650307-14650326 | None:intergenic | 20.0% |
| !! | TTTCTTTATTGTGTAACTAT+AGG | + | chr1_2:14650311-14650330 | Msa0058320:three_prime_UTR | 20.0% |
| !! | GTATTACAACATATTTCAAT+AGG | + | chr1_2:14650333-14650352 | Msa0058320:three_prime_UTR | 20.0% |
| !! | ATATGCAGTTTTTGTCATAT+TGG | + | chr1_2:14644295-14644314 | Msa0058320:intron | 25.0% |
| !! | TATGCAGTTTTTGTCATATT+GGG | + | chr1_2:14644296-14644315 | Msa0058320:intron | 25.0% |
| ! | CTTGATAAGAGTTTATATAG+AGG | + | chr1_2:14644353-14644372 | Msa0058320:intron | 25.0% |
| ! | AATTGACATGTTGAAATTTG+GGG | - | chr1_2:14644424-14644443 | None:intergenic | 25.0% |
| ! | CAATTGACATGTTGAAATTT+GGG | - | chr1_2:14644425-14644444 | None:intergenic | 25.0% |
| ! | TCAATTGACATGTTGAAATT+TGG | - | chr1_2:14644426-14644445 | None:intergenic | 25.0% |
| !! | TGAACTTAAGTAATTTGTAG+AGG | - | chr1_2:14644641-14644660 | None:intergenic | 25.0% |
| ! | TAAATAAGGTAATGAATTGC+AGG | - | chr1_2:14644747-14644766 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGTAACTTTGTGT+TGG | + | chr1_2:14644928-14644947 | Msa0058320:intron | 25.0% |
| ! | AAATGAATATATGATTGCTG+AGG | - | chr1_2:14645113-14645132 | None:intergenic | 25.0% |
| !! | TCAACTTTTATGAGTGAAAT+AGG | + | chr1_2:14645135-14645154 | Msa0058320:intron | 25.0% |
| ! | GTTTAATCATATTTGTATGC+TGG | - | chr1_2:14645295-14645314 | None:intergenic | 25.0% |
| ! | GTTTAAGGGAAAAATAAATG+AGG | + | chr1_2:14645532-14645551 | Msa0058320:intron | 25.0% |
| !!! | TTTTTCAACTGGAGTATTTA+GGG | - | chr1_2:14645659-14645678 | None:intergenic | 25.0% |
| !!! | TTTTTTCAACTGGAGTATTT+AGG | - | chr1_2:14645660-14645679 | None:intergenic | 25.0% |
| !! | AGAACAGTAGCAATTTTTAA+TGG | + | chr1_2:14645888-14645907 | Msa0058320:intron | 25.0% |
| ! | TGAAAAACATAGATGTTGTT+GGG | - | chr1_2:14646037-14646056 | None:intergenic | 25.0% |
| ! | ATGAAAAACATAGATGTTGT+TGG | - | chr1_2:14646038-14646057 | None:intergenic | 25.0% |
| !! | TTTTCATTTCAAACTTGAAG+TGG | + | chr1_2:14646051-14646070 | Msa0058320:intron | 25.0% |
| ! | TTTCATTTCAAACTTGAAGT+GGG | + | chr1_2:14646052-14646071 | Msa0058320:intron | 25.0% |
| ! | AAAGATTTCATCAAAAACCA+AGG | - | chr1_2:14646401-14646420 | Msa0058330:CDS | 25.0% |
| ! | AAAAGCTGATCAGATAATTT+CGG | + | chr1_2:14646718-14646737 | Msa0058320:intron | 25.0% |
| ! | ATTAATATTAGTTCACAACC+TGG | + | chr1_2:14646759-14646778 | Msa0058320:intron | 25.0% |
| !!! | ATATAAAGACTCTAAAGTTG+TGG | - | chr1_2:14646896-14646915 | Msa0058330:CDS | 25.0% |
| !! | TTTTTGCTTATAATTTGGGA+CGG | - | chr1_2:14647133-14647152 | None:intergenic | 25.0% |
| !!! | GTATAGTTTTGTGTTTTCTT+TGG | + | chr1_2:14647198-14647217 | Msa0058320:intron | 25.0% |
| !!! | AAACAATTTTCATTGGCTAT+TGG | + | chr1_2:14647245-14647264 | Msa0058320:intron | 25.0% |
| !! | TTTTTGCTTATATTATGGGA+CGG | + | chr1_2:14647430-14647449 | Msa0058320:intron | 25.0% |
| ! | TTTCAATAAGGGAATAACAA+TGG | - | chr1_2:14647600-14647619 | None:intergenic | 25.0% |
| ! | TACAACAATTGAGATTTCTT+TGG | - | chr1_2:14647801-14647820 | None:intergenic | 25.0% |
| ! | GAATCTATTTAAGTACTTTG+TGG | - | chr1_2:14648041-14648060 | None:intergenic | 25.0% |
| !!! | ACAGCATCGTTTTAATTAAA+CGG | - | chr1_2:14648384-14648403 | None:intergenic | 25.0% |
| ! | AAAAAGAAACAAGGAAATGT+TGG | - | chr1_2:14648468-14648487 | None:intergenic | 25.0% |
| !!! | TATATCATTTTGACTGATAC+TGG | + | chr1_2:14648847-14648866 | Msa0058320:intron | 25.0% |
| !!! | ATATCATTTTGACTGATACT+GGG | + | chr1_2:14648848-14648867 | Msa0058320:intron | 25.0% |
| ! | GAAACTAATTATATGCAGAA+CGG | - | chr1_2:14648897-14648916 | None:intergenic | 25.0% |
| ! | TTTATCTCTGGATACATAAT+AGG | - | chr1_2:14649017-14649036 | None:intergenic | 25.0% |
| !! | TTCAGCAACTTAATTTTATC+TGG | - | chr1_2:14649104-14649123 | None:intergenic | 25.0% |
| ! | GCAAACAAGAATATTAAGTT+TGG | - | chr1_2:14649189-14649208 | None:intergenic | 25.0% |
| !! | AGAGTTTAGTTCATATATCA+TGG | + | chr1_2:14649427-14649446 | Msa0058320:intron | 25.0% |
| !!! | TATTTTGATAACTATTTGCC+AGG | + | chr1_2:14649549-14649568 | Msa0058320:intron | 25.0% |
| !! | TTTTCAATCAAGAATTTAGC+TGG | - | chr1_2:14649773-14649792 | None:intergenic | 25.0% |
| ! | TGCTACATCAAAATTAACAA+TGG | + | chr1_2:14649827-14649846 | Msa0058320:CDS | 25.0% |
| ! | ACTAAGAAGTTCAAAATTGA+TGG | + | chr1_2:14649969-14649988 | Msa0058320:CDS | 25.0% |
| ! | CTATGATAAATTTCATGATC+TGG | + | chr1_2:14650013-14650032 | Msa0058320:CDS | 25.0% |
| ! | TGTTTATTTCCCTATTACTT+TGG | + | chr1_2:14650040-14650059 | Msa0058320:intron | 25.0% |
| ! | AAATTCAGTCCAAAGTAATA+GGG | - | chr1_2:14650052-14650071 | None:intergenic | 25.0% |
| ! | ATCATCAATTTAAATTCAGG+TGG | + | chr1_2:14650098-14650117 | Msa0058320:intron | 25.0% |
| ! | ACACAATAAAGAAATGAAAG+GGG | - | chr1_2:14650305-14650324 | None:intergenic | 25.0% |
| !! | TAATACAATGCTTTAGACAT+AGG | + | chr1_2:14650365-14650384 | Msa0058320:three_prime_UTR | 25.0% |
| ! | GAGAAATGAAGAGGATTTTA+GGG | - | chr1_2:14643276-14643295 | None:intergenic | 30.0% |
| ! | TGAGAAATGAAGAGGATTTT+AGG | - | chr1_2:14643277-14643296 | None:intergenic | 30.0% |
| TTATGGTGAGAATTTCAATG+CGG | + | chr1_2:14643573-14643592 | Msa0058320:CDS | 30.0% | |
| GTTGAATGGAAAGAAAGAAA+TGG | + | chr1_2:14643912-14643931 | Msa0058320:CDS | 30.0% | |
| TCCTGTTATTAGAGCAAATT+TGG | + | chr1_2:14643939-14643958 | Msa0058320:CDS | 30.0% | |
| ! | ACCAAATTTGCTCTAATAAC+AGG | - | chr1_2:14643943-14643962 | None:intergenic | 30.0% |
| AACTAAGCGATATATGAGAT+TGG | - | chr1_2:14644034-14644053 | None:intergenic | 30.0% | |
| GATAAGAGTTTATATAGAGG+AGG | + | chr1_2:14644356-14644375 | Msa0058320:intron | 30.0% | |
| TTGCAGGGTTATAAGATTAT+TGG | + | chr1_2:14644498-14644517 | Msa0058320:intron | 30.0% | |
| ! | TGCTACAAGCATTCATTTTA+CGG | + | chr1_2:14644582-14644601 | Msa0058320:CDS | 30.0% |
| !! | GTTTCATTAGCATTTGGTTT+TGG | + | chr1_2:14644662-14644681 | Msa0058320:intron | 30.0% |
| ! | GGTTTTCATTGGCATAAATA+AGG | - | chr1_2:14644761-14644780 | None:intergenic | 30.0% |
| !! | CTTGAGATTTAGGTTTTCAT+TGG | - | chr1_2:14644772-14644791 | None:intergenic | 30.0% |
| TGAAAACCTAAATCTCAAGA+TGG | + | chr1_2:14644773-14644792 | Msa0058320:intron | 30.0% | |
| ! | TGACAGTTTTTAATCGTTGA+TGG | + | chr1_2:14644833-14644852 | Msa0058320:intron | 30.0% |
| ! | GCAACTTTTGATCATTTCAT+AGG | + | chr1_2:14645017-14645036 | Msa0058320:intron | 30.0% |
| !!! | TTTTTGGTGCTTGTTATAAG+TGG | + | chr1_2:14645054-14645073 | Msa0058320:intron | 30.0% |
| ! | CAAATAAATGTGTTTTCTGC+TGG | + | chr1_2:14645189-14645208 | Msa0058320:CDS | 30.0% |
| ATGCACACTTTCATAAAGTA+GGG | + | chr1_2:14645453-14645472 | Msa0058320:intron | 30.0% | |
| ! | AAACCCCTTTTCAAATTTCT+AGG | + | chr1_2:14645700-14645719 | Msa0058320:intron | 30.0% |
| TCCTCCTAGAAATTTGAAAA+GGG | - | chr1_2:14645707-14645726 | None:intergenic | 30.0% | |
| TGTTCACCTAAAACATCAAT+TGG | + | chr1_2:14645766-14645785 | Msa0058320:intron | 30.0% | |
| GTTCACCTAAAACATCAATT+GGG | + | chr1_2:14645767-14645786 | Msa0058320:intron | 30.0% | |
| ! | TTGTTCCCAATTGATGTTTT+AGG | - | chr1_2:14645775-14645794 | None:intergenic | 30.0% |
| ! | ACATCAATTGGGAACAATTT+TGG | + | chr1_2:14645778-14645797 | Msa0058320:intron | 30.0% |
| AGAGAATAGTCCTTACAATA+AGG | + | chr1_2:14645864-14645883 | Msa0058320:intron | 30.0% | |
| GAGAATAGTCCTTACAATAA+GGG | + | chr1_2:14645865-14645884 | Msa0058320:intron | 30.0% | |
| ATTTCCAACAACAGATAAGT+TGG | + | chr1_2:14645924-14645943 | Msa0058320:intron | 30.0% | |
| ATTTCCAACTTATCTGTTGT+TGG | - | chr1_2:14645931-14645950 | None:intergenic | 30.0% | |
| ATGCTCAAAATTATTTGACG+AGG | + | chr1_2:14645949-14645968 | Msa0058320:intron | 30.0% | |
| TGCTCAAAATTATTTGACGA+GGG | + | chr1_2:14645950-14645969 | Msa0058320:intron | 30.0% | |
| AAAATTATTTGACGAGGGTT+TGG | + | chr1_2:14645955-14645974 | Msa0058320:intron | 30.0% | |
| GAAGAAATAGAGAATTATCC+TGG | + | chr1_2:14645985-14646004 | Msa0058320:intron | 30.0% | |
| TTCATTTCAAACTTGAAGTG+GGG | + | chr1_2:14646053-14646072 | Msa0058320:intron | 30.0% | |
| !! | TTTTCTGTTCACCTTTTTCA+AGG | - | chr1_2:14646360-14646379 | Msa0058330:CDS | 30.0% |
| ! | TTTTTGCAGAATGTTTTCCT+TGG | - | chr1_2:14646499-14646518 | Msa0058330:intron | 30.0% |
| ! | AATTATCTGATCAGCTTTTG+AGG | - | chr1_2:14646717-14646736 | Msa0058330:intron | 30.0% |
| AGAGAATGAGGCAAAAAAAA+AGG | - | chr1_2:14646869-14646888 | Msa0058330:CDS | 30.0% | |
| ACACTTTCTTCTCTCAAAAT+CGG | + | chr1_2:14646921-14646940 | Msa0058320:intron | 30.0% | |
| TTTCATGTCAAACTTGAAGT+GGG | - | chr1_2:14647096-14647115 | None:intergenic | 30.0% | |
| ! | TTTTCATGTCAAACTTGAAG+TGG | - | chr1_2:14647097-14647116 | None:intergenic | 30.0% |
| !! | TTTTCATTGGCTATTGGTTA+TGG | + | chr1_2:14647251-14647270 | Msa0058320:intron | 30.0% |
| AATTATTTGAGGAGGGTTTA+AGG | - | chr1_2:14647528-14647547 | None:intergenic | 30.0% | |
| TGCTCAAAATTATTTGAGGA+GGG | - | chr1_2:14647535-14647554 | None:intergenic | 30.0% | |
| ATGCTCAAAATTATTTGAGG+AGG | - | chr1_2:14647536-14647555 | None:intergenic | 30.0% | |
| TCAAATGGTGCTTTCAATAA+GGG | - | chr1_2:14647611-14647630 | None:intergenic | 30.0% | |
| GAAATTGAGAGATTCTCAAA+TGG | - | chr1_2:14647626-14647645 | None:intergenic | 30.0% | |
| TGCTCCAAATAAAATGTCAA+TGG | + | chr1_2:14647758-14647777 | Msa0058320:intron | 30.0% | |
| ATAGTACTTTCTAATGCCTT+TGG | + | chr1_2:14648140-14648159 | Msa0058320:intron | 30.0% | |
| !!! | CAGCATCGTTTTAATTAAAC+GGG | - | chr1_2:14648383-14648402 | None:intergenic | 30.0% |
| !!! | GTTGGACGTGTTTTATTTTT+GGG | - | chr1_2:14648418-14648437 | None:intergenic | 30.0% |
| ! | GCTCATTTAACTCTTTTTGT+AGG | + | chr1_2:14648924-14648943 | Msa0058320:intron | 30.0% |
| TGCATTTGTAACTAGAAAAG+TGG | - | chr1_2:14649075-14649094 | None:intergenic | 30.0% | |
| CAAATAAATGCATTTCAGCT+AGG | - | chr1_2:14649402-14649421 | None:intergenic | 30.0% | |
| TGATAAATTTCATGATCTGG+TGG | + | chr1_2:14650016-14650035 | Msa0058320:intron | 30.0% | |
| GATAAATTTCATGATCTGGT+GGG | + | chr1_2:14650017-14650036 | Msa0058320:intron | 30.0% | |
| CAAATTCAGTCCAAAGTAAT+AGG | - | chr1_2:14650053-14650072 | None:intergenic | 30.0% | |
| CTATTACTTTGGACTGAATT+TGG | + | chr1_2:14650051-14650070 | Msa0058320:intron | 30.0% | |
| ! | TTTTGACAGCAAAGATTACA+TGG | + | chr1_2:14650134-14650153 | Msa0058320:CDS | 30.0% |
| AAAGAATCAGGTTAGAAGTT+AGG | + | chr1_2:14650255-14650274 | Msa0058320:exon | 30.0% | |
| TAAAGAAATGAAAGGGGAAA+TGG | - | chr1_2:14650299-14650318 | None:intergenic | 30.0% | |
| ! | TTGCTAGCATAGTAGTATTT+TGG | + | chr1_2:14650586-14650605 | Msa0058320:three_prime_UTR | 30.0% |
| !!! | TAGTATTTTGGTTTGAAGAG+AGG | + | chr1_2:14650598-14650617 | Msa0058320:three_prime_UTR | 30.0% |
| AGGGAAAATGAAAACGAAGA+GGG | - | chr1_2:14643036-14643055 | None:intergenic | 35.0% | |
| GGATTTGTAGAAGAAGTAGA+AGG | - | chr1_2:14643197-14643216 | None:intergenic | 35.0% | |
| !!! | AGCTTAGGGTTAGTTGTTTT+AGG | - | chr1_2:14643234-14643253 | None:intergenic | 35.0% |
| !!! | TGAAGAGGATTTTAGGGTTA+GGG | - | chr1_2:14643270-14643289 | None:intergenic | 35.0% |
| !!! | ATGAAGAGGATTTTAGGGTT+AGG | - | chr1_2:14643271-14643290 | None:intergenic | 35.0% |
| !! | TGTTGGTTTGAGAAATGAAG+AGG | - | chr1_2:14643285-14643304 | None:intergenic | 35.0% |
| AGTATAAATTCTTCGCCGAT+TGG | + | chr1_2:14643464-14643483 | Msa0058320:CDS | 35.0% | |
| TTTGTCGAAGTGTAGATTTG+CGG | + | chr1_2:14643528-14643547 | Msa0058320:CDS | 35.0% | |
| AAGTGTAGATTTGCGGTATT+CGG | + | chr1_2:14643535-14643554 | Msa0058320:CDS | 35.0% | |
| TTGGTAAGGAGATTGTGAAA+CGG | + | chr1_2:14643596-14643615 | Msa0058320:CDS | 35.0% | |
| AAGGTTGTTGGAATACTGAA+AGG | + | chr1_2:14643712-14643731 | Msa0058320:CDS | 35.0% | |
| !! | ATACTGAAAGGTGTTGATGA+TGG | + | chr1_2:14643724-14643743 | Msa0058320:CDS | 35.0% |
| GTTGATCTTGAAGATATTGC+CGG | + | chr1_2:14643838-14643857 | Msa0058320:CDS | 35.0% | |
| ! | CAGAAGAGCTATTGTGATTT+TGG | + | chr1_2:14644088-14644107 | Msa0058320:intron | 35.0% |
| AGTGATATTGCTTGCTTACT+TGG | + | chr1_2:14644117-14644136 | Msa0058320:intron | 35.0% | |
| TTGCTTACTTGGTACTTGTT+TGG | + | chr1_2:14644128-14644147 | Msa0058320:intron | 35.0% | |
| TCATAATTCGGACAAACTCA+CGG | - | chr1_2:14644159-14644178 | None:intergenic | 35.0% | |
| ! | TGGATTTTGCAAGATCACTA+TGG | + | chr1_2:14644216-14644235 | Msa0058320:intron | 35.0% |
| ! | GAGTCTTATCTATCTGATGT+GGG | - | chr1_2:14644334-14644353 | None:intergenic | 35.0% |
| ! | AGAGTCTTATCTATCTGATG+TGG | - | chr1_2:14644335-14644354 | None:intergenic | 35.0% |
| CTAACTCAACCTTACAAAAC+CGG | - | chr1_2:14644400-14644419 | None:intergenic | 35.0% | |
| !! | AAGATTATTGGTTCACACAG+TGG | + | chr1_2:14644510-14644529 | Msa0058320:CDS | 35.0% |
| TTTACGGAATTGAGAGTCAT+AGG | + | chr1_2:14644598-14644617 | Msa0058320:CDS | 35.0% | |
| GTTCACGTTTCATTAGCATT+TGG | + | chr1_2:14644656-14644675 | Msa0058320:intron | 35.0% | |
| !!! | TCATTAGCATTTGGTTTTGG+TGG | + | chr1_2:14644665-14644684 | Msa0058320:intron | 35.0% |
| ! | CTTTGTGTTGGTATTTGACA+TGG | + | chr1_2:14644940-14644959 | Msa0058320:intron | 35.0% |
| TTATGAGTGAAATAGGTGCA+TGG | + | chr1_2:14645142-14645161 | Msa0058320:intron | 35.0% | |
| ! | ATAAATGTGTTTTCTGCTGG+AGG | + | chr1_2:14645192-14645211 | Msa0058320:CDS | 35.0% |
| AAATCCAGTAGCGAAAAGTT+GGG | + | chr1_2:14645223-14645242 | Msa0058320:CDS | 35.0% | |
| AAACAAATGAAAGGAGTTCC+TGG | + | chr1_2:14645311-14645330 | Msa0058320:CDS | 35.0% | |
| CATGCACACTTTCATAAAGT+AGG | + | chr1_2:14645452-14645471 | Msa0058320:intron | 35.0% | |
| AAGTAGGGTAAGTTTCATAC+CGG | + | chr1_2:14645468-14645487 | Msa0058320:intron | 35.0% | |
| AGATTATAATGTTTGCGTGC+AGG | + | chr1_2:14645508-14645527 | Msa0058320:intron | 35.0% | |
| TGAAAAGGGGTTTGTCTTTA+GGG | - | chr1_2:14645693-14645712 | None:intergenic | 35.0% | |
| TTGAAAAGGGGTTTGTCTTT+AGG | - | chr1_2:14645694-14645713 | None:intergenic | 35.0% | |
| CCTCCTAGAAATTTGAAAAG+GGG | - | chr1_2:14645706-14645725 | None:intergenic | 35.0% | |
| GTCCTCCTAGAAATTTGAAA+AGG | - | chr1_2:14645708-14645727 | None:intergenic | 35.0% | |
| TGGAACATCTATGCATGAAA+TGG | + | chr1_2:14645798-14645817 | Msa0058320:intron | 35.0% | |
| TACTGTTCTCCCTTATTGTA+AGG | - | chr1_2:14645877-14645896 | None:intergenic | 35.0% | |
| !! | ACACGATTTTGAGAGAAGAA+AGG | + | chr1_2:14646222-14646241 | Msa0058320:intron | 35.0% |
| !! | CACGATTTTGAGAGAAGAAA+GGG | + | chr1_2:14646223-14646242 | Msa0058320:intron | 35.0% |
| !! | ACTCTTTGAAGTCGTAGAAT+CGG | + | chr1_2:14646260-14646279 | Msa0058320:intron | 35.0% |
| ! | ATTTCTGAAAACCTTTGCCT+TGG | + | chr1_2:14646292-14646311 | Msa0058320:intron | 35.0% |
| !!! | TTTTTCAAGGAAGGAAATCG+AGG | - | chr1_2:14646347-14646366 | Msa0058330:CDS | 35.0% |
| TCGATTTCCTTCCTTGAAAA+AGG | + | chr1_2:14646346-14646365 | Msa0058320:intron | 35.0% | |
| TTCATCAAAAACCAAGGCAA+AGG | - | chr1_2:14646395-14646414 | Msa0058330:CDS | 35.0% | |
| GGTTAATGCTGAAATGTATG+AGG | - | chr1_2:14646461-14646480 | Msa0058330:CDS | 35.0% | |
| ! | AGAATGTTTTCCTTGGATTG+CGG | - | chr1_2:14646492-14646511 | Msa0058330:intron | 35.0% |
| GAAGATTTCATAGCATGCTT+GGG | - | chr1_2:14646682-14646701 | Msa0058330:CDS | 35.0% | |
| TTCACTTCTACGAGAATTGA+TGG | - | chr1_2:14646802-14646821 | Msa0058330:intron | 35.0% | |
| CACTTTCTTCTCTCAAAATC+GGG | + | chr1_2:14646922-14646941 | Msa0058320:intron | 35.0% | |
| TTCATGTCAAACTTGAAGTG+GGG | - | chr1_2:14647095-14647114 | None:intergenic | 35.0% | |
| CTCAAATGGTGCTTTCAATA+AGG | - | chr1_2:14647612-14647631 | None:intergenic | 35.0% | |
| TCATTTATGCAGAGAGCTAT+GGG | - | chr1_2:14647906-14647925 | None:intergenic | 35.0% | |
| TTCATTTATGCAGAGAGCTA+TGG | - | chr1_2:14647907-14647926 | None:intergenic | 35.0% | |
| !! | TTCATCGTTTTTGCGACTTT+CGG | - | chr1_2:14648297-14648316 | None:intergenic | 35.0% |
| CATAACAAGTACAGTAACGA+TGG | - | chr1_2:14648329-14648348 | None:intergenic | 35.0% | |
| !!! | CGTTGGACGTGTTTTATTTT+TGG | - | chr1_2:14648419-14648438 | None:intergenic | 35.0% |
| CAAAATCCTAGACAAGATCA+GGG | - | chr1_2:14648735-14648754 | None:intergenic | 35.0% | |
| TCAAAATCCTAGACAAGATC+AGG | - | chr1_2:14648736-14648755 | None:intergenic | 35.0% | |
| TCAAAATGATATAACGGTGC+TGG | - | chr1_2:14648840-14648859 | None:intergenic | 35.0% | |
| CTAATTATATGCAGAACGGT+GGG | - | chr1_2:14648893-14648912 | None:intergenic | 35.0% | |
| ACTAATTATATGCAGAACGG+TGG | - | chr1_2:14648894-14648913 | None:intergenic | 35.0% | |
| CATTGTGCATTATCTCTTGT+TGG | + | chr1_2:14648987-14649006 | Msa0058320:CDS | 35.0% | |
| TCCAGAGATAAATACACTTG+TGG | + | chr1_2:14649025-14649044 | Msa0058320:CDS | 35.0% | |
| TCCACAAGTGTATTTATCTC+TGG | - | chr1_2:14649029-14649048 | None:intergenic | 35.0% | |
| ! | TTCTGAAAACCTCAAAACCT+GGG | - | chr1_2:14649135-14649154 | None:intergenic | 35.0% |
| ! | ATTCTGAAAACCTCAAAACC+TGG | - | chr1_2:14649136-14649155 | None:intergenic | 35.0% |
| TTATATGTCAGTGTAGATGC+CGG | + | chr1_2:14649218-14649237 | Msa0058320:CDS | 35.0% | |
| ACATAGACAATGTGATCAAG+AGG | - | chr1_2:14649530-14649549 | None:intergenic | 35.0% | |
| ACCCTTGATTTCAATGAAGT+CGG | - | chr1_2:14649692-14649711 | None:intergenic | 35.0% | |
| !! | ATCAAGGGTGTTACATATTG+TGG | + | chr1_2:14649703-14649722 | Msa0058320:CDS | 35.0% |
| AAGAATTTAGCTGGACTAAG+GGG | - | chr1_2:14649764-14649783 | None:intergenic | 35.0% | |
| CAAGAATTTAGCTGGACTAA+GGG | - | chr1_2:14649765-14649784 | None:intergenic | 35.0% | |
| TCAAGAATTTAGCTGGACTA+AGG | - | chr1_2:14649766-14649785 | None:intergenic | 35.0% | |
| AGTTCATTGTCATTCGAAGA+TGG | - | chr1_2:14649796-14649815 | None:intergenic | 35.0% | |
| AATGACAATGAACTCTTCTC+AGG | + | chr1_2:14649802-14649821 | Msa0058320:intron | 35.0% | |
| TAACAATGGAAAATGTCCCT+TGG | + | chr1_2:14649841-14649860 | Msa0058320:CDS | 35.0% | |
| !! | ACTTCTTAGTTTTTGCCAAG+AGG | - | chr1_2:14649959-14649978 | None:intergenic | 35.0% |
| ATTTAAATTCAGGTGGCTTC+TGG | + | chr1_2:14650105-14650124 | Msa0058320:intron | 35.0% | |
| ACTTCTAACCTGATTCTTTG+CGG | - | chr1_2:14650254-14650273 | None:intergenic | 35.0% | |
| ACATTGGGACTTAAATACAC+TGG | - | chr1_2:14650401-14650420 | None:intergenic | 35.0% | |
| ! | ACGCAATGCTATTTATTGCA+AGG | - | chr1_2:14650544-14650563 | None:intergenic | 35.0% |
| TTGAAGAGAGGTAGATAAAG+TGG | + | chr1_2:14650610-14650629 | Msa0058320:three_prime_UTR | 35.0% | |
| !!! | AGGTTTTGAAGTTAGAAGCC+CGG | - | chr1_2:14642993-14643012 | None:intergenic | 40.0% |
| GAGGGAAAATGAAAACGAAG+AGG | - | chr1_2:14643037-14643056 | None:intergenic | 40.0% | |
| ! | TAATGGTGATTCGATGATGG+TGG | - | chr1_2:14643114-14643133 | None:intergenic | 40.0% |
| !! | TGGTAATGGTGATTCGATGA+TGG | - | chr1_2:14643117-14643136 | None:intergenic | 40.0% |
| TGATGAGAATGGCATGGTAA+TGG | - | chr1_2:14643131-14643150 | None:intergenic | 40.0% | |
| GTAGAAGAAGTAGAAGGTTG+TGG | - | chr1_2:14643191-14643210 | None:intergenic | 40.0% | |
| !!! | GTTGTTTTAGGCTTCGTAAG+CGG | - | chr1_2:14643222-14643241 | None:intergenic | 40.0% |
| !!! | AGGATTTTAGGGTTAGGGTT+GGG | - | chr1_2:14643265-14643284 | None:intergenic | 40.0% |
| !! | ATAAGGAGAAGCGTTTCCTT+GGG | - | chr1_2:14643406-14643425 | None:intergenic | 40.0% |
| TCGGCGAAGAATTTATACTC+CGG | - | chr1_2:14643463-14643482 | None:intergenic | 40.0% | |
| !!! | AGTTCGGAGGATTTTAGAGT+TGG | + | chr1_2:14643496-14643515 | Msa0058320:CDS | 40.0% |
| ! | GAATTTCAATGCGGTTGGTA+AGG | + | chr1_2:14643582-14643601 | Msa0058320:CDS | 40.0% |
| !! | TGGATGAGGTTTTTGAGAAG+TGG | + | chr1_2:14643683-14643702 | Msa0058320:CDS | 40.0% |
| !! | AGGTTTTTGAGAAGTGGTGT+GGG | + | chr1_2:14643689-14643708 | Msa0058320:CDS | 40.0% |
| !! | TGTTGATGATGGTGGTGATT+TGG | + | chr1_2:14643735-14643754 | Msa0058320:CDS | 40.0% |
| TGATGAAGAAGAGTCTGATG+AGG | + | chr1_2:14643792-14643811 | Msa0058320:CDS | 40.0% | |
| ! | GAGAGTAATGGGAAGTTGAA+TGG | + | chr1_2:14643898-14643917 | Msa0058320:CDS | 40.0% |
| ! | TAGAGCAAATTTGGTGAAGC+AGG | + | chr1_2:14643948-14643967 | Msa0058320:CDS | 40.0% |
| ! | ATTTTGCGAAAGCTACACTC+TGG | + | chr1_2:14644191-14644210 | Msa0058320:intron | 40.0% |
| ATCTATCTGATGTGGGACTT+GGG | - | chr1_2:14644327-14644346 | None:intergenic | 40.0% | |
| TATCTATCTGATGTGGGACT+TGG | - | chr1_2:14644328-14644347 | None:intergenic | 40.0% | |
| ! | GTGGTGTCAAGATTTGTAGA+TGG | + | chr1_2:14644529-14644548 | Msa0058320:CDS | 40.0% |
| CAAGCTCCATCTTGAGATTT+AGG | - | chr1_2:14644782-14644801 | None:intergenic | 40.0% | |
| TTCGATGTACGTTTCATCGA+TGG | + | chr1_2:14644808-14644827 | Msa0058320:intron | 40.0% | |
| GGCTTAGAAGAAGAATGTTC+TGG | + | chr1_2:14644961-14644980 | Msa0058320:intron | 40.0% | |
| TATTTGCACATGCCAAGCTA+GGG | - | chr1_2:14645175-14645194 | None:intergenic | 40.0% | |
| TTATTTGCACATGCCAAGCT+AGG | - | chr1_2:14645176-14645195 | None:intergenic | 40.0% | |
| CAAATCCAGTAGCGAAAAGT+TGG | + | chr1_2:14645222-14645241 | Msa0058320:CDS | 40.0% | |
| GCAGAATTCACGATCTCTAT+TGG | - | chr1_2:14645266-14645285 | None:intergenic | 40.0% | |
| !! | ACACATTGTTGTCAGGTTGA+TGG | + | chr1_2:14645381-14645400 | Msa0058320:intron | 40.0% |
| ! | ACTGGAGTATTTAGGGAAAG+AGG | - | chr1_2:14645652-14645671 | None:intergenic | 40.0% |
| !! | CCCCTTTTCAAATTTCTAGG+AGG | + | chr1_2:14645703-14645722 | Msa0058320:intron | 40.0% |
| GTTGAAGAAAGCGAGACAAA+TGG | + | chr1_2:14646007-14646026 | Msa0058320:intron | 40.0% | |
| ! | GTTAGACATTGAAGCACTAG+CGG | - | chr1_2:14646123-14646142 | None:intergenic | 40.0% |
| GTCTAACTCCAACGAATCAA+CGG | + | chr1_2:14646136-14646155 | Msa0058320:intron | 40.0% | |
| AAAACCTTTGCCTTGGTTGA+CGG | + | chr1_2:14646299-14646318 | Msa0058320:intron | 40.0% | |
| GGAAATCGAGGAAGATTTCA+TGG | - | chr1_2:14646335-14646354 | Msa0058330:CDS | 40.0% | |
| !!! | CTGTTCACCTTTTTCAAGGA+AGG | - | chr1_2:14646356-14646375 | Msa0058330:CDS | 40.0% |
| TTTCCTTGGATTGCGGTTAA+GGG | - | chr1_2:14646485-14646504 | Msa0058330:CDS | 40.0% | |
| ! | TTTTCCTTGGATTGCGGTTA+AGG | - | chr1_2:14646486-14646505 | Msa0058330:CDS | 40.0% |
| AACTGTTTCCGAACAACTCT+AGG | + | chr1_2:14646625-14646644 | Msa0058320:intron | 40.0% | |
| GGAAGATTTCATAGCATGCT+TGG | - | chr1_2:14646683-14646702 | Msa0058330:CDS | 40.0% | |
| !! | ATCTGATCAGCTTTTGAGGA+AGG | - | chr1_2:14646713-14646732 | Msa0058330:intron | 40.0% |
| ACTTCTACGAGAATTGATGG+CGG | - | chr1_2:14646799-14646818 | Msa0058330:intron | 40.0% | |
| AGTTGTGGAATCAGAGAATG+AGG | - | chr1_2:14646881-14646900 | Msa0058330:CDS | 40.0% | |
| GTCTTTCATTCTATCTGTGG+CGG | + | chr1_2:14646944-14646963 | Msa0058320:intron | 40.0% | |
| !! | AGCACCGACAATATCGATAA+TGG | + | chr1_2:14647037-14647056 | Msa0058320:intron | 40.0% |
| GCTGCCATTATCGATATTGT+CGG | - | chr1_2:14647044-14647063 | Msa0058330:CDS | 40.0% | |
| ! | TGCTTATAATTTGGGACGGA+GGG | - | chr1_2:14647129-14647148 | None:intergenic | 40.0% |
| ! | TTGCTTATAATTTGGGACGG+AGG | - | chr1_2:14647130-14647149 | None:intergenic | 40.0% |
| TTGCTTATATTATGGGACGG+AGG | + | chr1_2:14647433-14647452 | Msa0058320:intron | 40.0% | |
| TGCTTATATTATGGGACGGA+GGG | + | chr1_2:14647434-14647453 | Msa0058320:intron | 40.0% | |
| ! | TTGACTCGCTTTCTTCAATC+TGG | + | chr1_2:14647479-14647498 | Msa0058320:intron | 40.0% |
| TTGTTTACCTCCTCTCAGAT+GGG | - | chr1_2:14647865-14647884 | None:intergenic | 40.0% | |
| ATTGTTTACCTCCTCTCAGA+TGG | - | chr1_2:14647866-14647885 | None:intergenic | 40.0% | |
| AGAATTCAGCACATCAGAGA+TGG | - | chr1_2:14647982-14648001 | None:intergenic | 40.0% | |
| ATCTCTGATGTGCTGAATTC+TGG | + | chr1_2:14647981-14648000 | Msa0058320:intron | 40.0% | |
| AGTACTTTGTGGATAGTGAC+AGG | - | chr1_2:14648030-14648049 | None:intergenic | 40.0% | |
| ATGCCTTTGGATTTGTGTGA+TGG | + | chr1_2:14648153-14648172 | Msa0058320:intron | 40.0% | |
| ATGCCATCACACAAATCCAA+AGG | - | chr1_2:14648159-14648178 | None:intergenic | 40.0% | |
| !!! | GATCACGATTTTGACTACCT+AGG | - | chr1_2:14648184-14648203 | None:intergenic | 40.0% |
| AAAATCGTGATCCAACTCGT+AGG | + | chr1_2:14648192-14648211 | Msa0058320:intron | 40.0% | |
| !!! | CGTTTTAATTAAACGGGTCG+TGG | - | chr1_2:14648377-14648396 | None:intergenic | 40.0% |
| GCAACTTTGCAATGCCAATA+TGG | - | chr1_2:14648786-14648805 | None:intergenic | 40.0% | |
| !!! | TCATTTTGACTGATACTGGG+AGG | + | chr1_2:14648851-14648870 | Msa0058320:intron | 40.0% |
| ! | TCTTTTTGTAGGAGTCACCT+CGG | + | chr1_2:14648935-14648954 | Msa0058320:intron | 40.0% |
| TTGTGGATGAGTTGCACAAA+AGG | + | chr1_2:14649042-14649061 | Msa0058320:CDS | 40.0% | |
| AACCTCAAAACCTGGGTAAT+AGG | - | chr1_2:14649128-14649147 | None:intergenic | 40.0% | |
| CTTAAGAGAGTCCTTTGTTC+CGG | - | chr1_2:14649240-14649259 | None:intergenic | 40.0% | |
| ! | ACCACTCTTTGGAGATTTCT+GGG | + | chr1_2:14649271-14649290 | Msa0058320:CDS | 40.0% |
| CATGATCACCATCTGAAGAA+GGG | + | chr1_2:14649461-14649480 | Msa0058320:intron | 40.0% | |
| ATGATCACCATCTGAAGAAG+GGG | + | chr1_2:14649462-14649481 | Msa0058320:intron | 40.0% | |
| ! | TTTTTCCTTCAGAGCAGTCA+AGG | - | chr1_2:14649578-14649597 | None:intergenic | 40.0% |
| AGCATTCCATCCTTTCACAA+GGG | - | chr1_2:14649626-14649645 | None:intergenic | 40.0% | |
| ACCCGACTTCATTGAAATCA+AGG | + | chr1_2:14649687-14649706 | Msa0058320:CDS | 40.0% | |
| CCCTTGATTTCAATGAAGTC+GGG | - | chr1_2:14649691-14649710 | None:intergenic | 40.0% | |
| CCCGACTTCATTGAAATCAA+GGG | + | chr1_2:14649688-14649707 | Msa0058320:CDS | 40.0% | |
| TAGAGATAGAGAGAGAAGAG+GGG | - | chr1_2:14649741-14649760 | None:intergenic | 40.0% | |
| GTAGAGATAGAGAGAGAAGA+GGG | - | chr1_2:14649742-14649761 | None:intergenic | 40.0% | |
| ! | AGTTCAAAATTGATGGCCAG+TGG | + | chr1_2:14649976-14649995 | Msa0058320:CDS | 40.0% |
| AGTCTATCCATGTATACCAC+TGG | - | chr1_2:14649995-14650014 | None:intergenic | 40.0% | |
| ATCCAGGACAGTTGAGATAT+AGG | + | chr1_2:14650205-14650224 | Msa0058320:CDS | 40.0% | |
| TTCCTATATCTCAACTGTCC+TGG | - | chr1_2:14650210-14650229 | None:intergenic | 40.0% | |
| AGGTTAGAAGTTAGGCCTTT+GGG | + | chr1_2:14650263-14650282 | Msa0058320:exon | 40.0% | |
| ATGAAAGGGGAAATGGATGT+TGG | - | chr1_2:14650292-14650311 | None:intergenic | 40.0% | |
| CCTCGAATTGGGAAAACATT+GGG | - | chr1_2:14650416-14650435 | None:intergenic | 40.0% | |
| TTCCTCAATTGCCTCGAATT+GGG | - | chr1_2:14650427-14650446 | None:intergenic | 40.0% | |
| TTTCCTCAATTGCCTCGAAT+TGG | - | chr1_2:14650428-14650447 | None:intergenic | 40.0% | |
| !! | TTGTTTTGTTACGGCCTGGT+GGG | - | chr1_2:14642970-14642989 | None:intergenic | 45.0% |
| !! | GAAGCCCGGTTGTTTTGTTA+CGG | - | chr1_2:14642979-14642998 | None:intergenic | 45.0% |
| !! | AGTGCTGTTTAGTGGGCTTT+AGG | - | chr1_2:14643013-14643032 | None:intergenic | 45.0% |
| !! | AAGAGGGAGTGCTGTTTAGT+GGG | - | chr1_2:14643020-14643039 | None:intergenic | 45.0% |
| ! | CGTTTTCATTTTCCCTCCCA+CGG | + | chr1_2:14643040-14643059 | Msa0058320:five_prime_UTR | 45.0% |
| !! | TGGTACTGATGAGAATGGCA+TGG | - | chr1_2:14643137-14643156 | None:intergenic | 45.0% |
| GAAGAAGTAGAAGGTTGTGG+CGG | - | chr1_2:14643188-14643207 | None:intergenic | 45.0% | |
| !!! | GGATTTTAGGGTTAGGGTTG+GGG | - | chr1_2:14643264-14643283 | None:intergenic | 45.0% |
| !!! | GAGGATTTTAGGGTTAGGGT+TGG | - | chr1_2:14643266-14643285 | None:intergenic | 45.0% |
| !!! | AGAGAGGGTTTTGGAAGTGT+TGG | - | chr1_2:14643302-14643321 | None:intergenic | 45.0% |
| ! | GGTTGTTTGAGGTGAGGAAA+CGG | - | chr1_2:14643336-14643355 | None:intergenic | 45.0% |
| ! | ATGCAAGGTTGTTTGAGGTG+AGG | - | chr1_2:14643342-14643361 | None:intergenic | 45.0% |
| GTCGAATGCAAGGTTGTTTG+AGG | - | chr1_2:14643347-14643366 | None:intergenic | 45.0% | |
| CATCGATGATGTCGAATGCA+AGG | - | chr1_2:14643357-14643376 | None:intergenic | 45.0% | |
| CTTGCATTCGACATCATCGA+TGG | + | chr1_2:14643355-14643374 | Msa0058320:CDS | 45.0% | |
| !! | TAAGGAGAAGCGTTTCCTTG+GGG | - | chr1_2:14643405-14643424 | None:intergenic | 45.0% |
| !! | GATAAGGAGAAGCGTTTCCT+TGG | - | chr1_2:14643407-14643426 | None:intergenic | 45.0% |
| TCCTTATCGTTGCTTCCACT+TGG | + | chr1_2:14643419-14643438 | Msa0058320:CDS | 45.0% | |
| CCTTATCGTTGCTTCCACTT+GGG | + | chr1_2:14643420-14643439 | Msa0058320:CDS | 45.0% | |
| AAGAATTTATACTCCGGCGG+TGG | - | chr1_2:14643457-14643476 | None:intergenic | 45.0% | |
| GCGAAGAATTTATACTCCGG+CGG | - | chr1_2:14643460-14643479 | None:intergenic | 45.0% | |
| !! | AGATTTGCGGTATTCGGTGT+CGG | + | chr1_2:14643541-14643560 | Msa0058320:CDS | 45.0% |
| GGTGAGAATTTCAATGCGGT+TGG | + | chr1_2:14643577-14643596 | Msa0058320:CDS | 45.0% | |
| GGAGATTGTGAAACGGATGA+AGG | + | chr1_2:14643603-14643622 | Msa0058320:CDS | 45.0% | |
| ! | TGGTAACGAGATGATTCCGT+TGG | + | chr1_2:14643633-14643652 | Msa0058320:CDS | 45.0% |
| GGTAACGAGATGATTCCGTT+GGG | + | chr1_2:14643634-14643653 | Msa0058320:CDS | 45.0% | |
| GTAACGAGATGATTCCGTTG+GGG | + | chr1_2:14643635-14643654 | Msa0058320:CDS | 45.0% | |
| TAACGAGATGATTCCGTTGG+GGG | + | chr1_2:14643636-14643655 | Msa0058320:CDS | 45.0% | |
| !! | GAGGTTTTTGAGAAGTGGTG+TGG | + | chr1_2:14643688-14643707 | Msa0058320:CDS | 45.0% |
| !! | TTTTGAGAAGTGGTGTGGGA+AGG | + | chr1_2:14643693-14643712 | Msa0058320:CDS | 45.0% |
| !! | CTGAAAGGTGTTGATGATGG+TGG | + | chr1_2:14643727-14643746 | Msa0058320:CDS | 45.0% |
| ! | TGGTGATTTGGAGAATGCTG+AGG | + | chr1_2:14643747-14643766 | Msa0058320:CDS | 45.0% |
| ! | TGATTTGGAGAATGCTGAGG+AGG | + | chr1_2:14643750-14643769 | Msa0058320:CDS | 45.0% |
| TGAAGAAGAGTCTGATGAGG+AGG | + | chr1_2:14643795-14643814 | Msa0058320:CDS | 45.0% | |
| CTACGGTGAAGGAGAGTAAT+GGG | + | chr1_2:14643887-14643906 | Msa0058320:CDS | 45.0% | |
| GTCCGAATTATGATGACCCA+CGG | + | chr1_2:14644166-14644185 | Msa0058320:intron | 45.0% | |
| CACCGTGGGTCATCATAATT+CGG | - | chr1_2:14644171-14644190 | None:intergenic | 45.0% | |
| AGCTTTCGCAAAATCACCGT+GGG | - | chr1_2:14644185-14644204 | None:intergenic | 45.0% | |
| TAGCTTTCGCAAAATCACCG+TGG | - | chr1_2:14644186-14644205 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1_2:14644391-14644410 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1_2:14644388-14644407 | Msa0058320:intron | 45.0% |
| TCGTTTATGTGTCGTGCTAG+CGG | + | chr1_2:14644696-14644715 | Msa0058320:intron | 45.0% | |
| TGAGTGAAATAGGTGCATGG+AGG | + | chr1_2:14645145-14645164 | Msa0058320:intron | 45.0% | |
| ATTTGCACATGCCAAGCTAG+GGG | - | chr1_2:14645174-14645193 | None:intergenic | 45.0% | |
| AGTAGCGAAAAGTTGGGTGT+GGG | + | chr1_2:14645229-14645248 | Msa0058320:CDS | 45.0% | |
| TGTTTGCGTGCAGGAGTTTA+AGG | + | chr1_2:14645517-14645536 | Msa0058320:intron | 45.0% | |
| GTTTGCGTGCAGGAGTTTAA+GGG | + | chr1_2:14645518-14645537 | Msa0058320:intron | 45.0% | |
| TTGTCTCGCTTTCTTCAACC+AGG | - | chr1_2:14646006-14646025 | None:intergenic | 45.0% | |
| !! | AGCACTAGCGGTATCGATAA+CGG | - | chr1_2:14646111-14646130 | None:intergenic | 45.0% |
| GAAGATTTCATGGCATGGCT+GGG | - | chr1_2:14646325-14646344 | Msa0058330:CDS | 45.0% | |
| TCGAGGAAGATTTCATGGCA+TGG | - | chr1_2:14646330-14646349 | Msa0058330:CDS | 45.0% | |
| TTCGCATGAAACCTTTGCCT+TGG | + | chr1_2:14646381-14646400 | Msa0058320:intron | 45.0% | |
| ATTTCATAGCATGCTTGGGC+CGG | - | chr1_2:14646678-14646697 | Msa0058330:CDS | 45.0% | |
| !! | GCTTTTGAGGAAGGAAATCG+AGG | - | chr1_2:14646704-14646723 | Msa0058330:intron | 45.0% |
| GCGGCAATAATGTTTCATCC+AGG | - | chr1_2:14646780-14646799 | Msa0058330:intron | 45.0% | |
| ACGTTTCGCATTACCAGAGA+CGG | + | chr1_2:14646825-14646844 | Msa0058320:intron | 45.0% | |
| GCATTACCAGAGACGGTAAT+CGG | + | chr1_2:14646832-14646851 | Msa0058320:intron | 45.0% | |
| CGGGTCTTTCATTCTATCTG+TGG | + | chr1_2:14646941-14646960 | Msa0058320:intron | 45.0% | |
| ! | GACGGAGGGAGTATATTGTT+GGG | + | chr1_2:14647448-14647467 | Msa0058320:intron | 45.0% |
| GTTGTAGCTCTCTACAACAC+AGG | + | chr1_2:14647815-14647834 | Msa0058320:intron | 45.0% | |
| TGATGTGCTGAATTCTGGTC+TGG | + | chr1_2:14647986-14648005 | Msa0058320:intron | 45.0% | |
| TTTGTGTGATGGCATGACCT+AGG | + | chr1_2:14648164-14648183 | Msa0058320:intron | 45.0% | |
| AATCGTACGATCCTACGAGT+TGG | - | chr1_2:14648206-14648225 | None:intergenic | 45.0% | |
| !! | ATCGTTTTTGCGACTTTCGG+CGG | - | chr1_2:14648294-14648313 | None:intergenic | 45.0% |
| ATAAAACACGTCCAACGCTG+TGG | + | chr1_2:14648422-14648441 | Msa0058320:intron | 45.0% | |
| CAAATAGGAAACCACAGCGT+TGG | - | chr1_2:14648436-14648455 | None:intergenic | 45.0% | |
| TGTTGGCGTGTAGCACAAAT+AGG | - | chr1_2:14648451-14648470 | None:intergenic | 45.0% | |
| ATCCTTCCCTGATCTTGTCT+AGG | + | chr1_2:14648726-14648745 | Msa0058320:intron | 45.0% | |
| ATCCTAGACAAGATCAGGGA+AGG | - | chr1_2:14648731-14648750 | None:intergenic | 45.0% | |
| ! | TAACTGAAGGCATGACACCA+CGG | + | chr1_2:14648964-14648983 | Msa0058320:CDS | 45.0% |
| AGAGATAATGCACAATGCCG+TGG | - | chr1_2:14648984-14649003 | None:intergenic | 45.0% | |
| TGGATGAGTTGCACAAAAGG+AGG | + | chr1_2:14649045-14649064 | Msa0058320:CDS | 45.0% | |
| ! | AGCCTATTACCCAGGTTTTG+AGG | + | chr1_2:14649123-14649142 | Msa0058320:intron | 45.0% |
| CGGAACAAAGGACTCTCTTA+AGG | + | chr1_2:14649238-14649257 | Msa0058320:CDS | 45.0% | |
| GCAATCGATAGACCACTCTT+TGG | + | chr1_2:14649260-14649279 | Msa0058320:CDS | 45.0% | |
| ! | GACCACTCTTTGGAGATTTC+TGG | + | chr1_2:14649270-14649289 | Msa0058320:CDS | 45.0% |
| TCCCAGAAATCTCCAAAGAG+TGG | - | chr1_2:14649275-14649294 | None:intergenic | 45.0% | |
| GCATGATCACCATCTGAAGA+AGG | + | chr1_2:14649460-14649479 | Msa0058320:intron | 45.0% | |
| CAGCATTCCATCCTTTCACA+AGG | - | chr1_2:14649627-14649646 | None:intergenic | 45.0% | |
| AGAGATAGAGAGAGAAGAGG+GGG | - | chr1_2:14649740-14649759 | None:intergenic | 45.0% | |
| GGTAGAGATAGAGAGAGAAG+AGG | - | chr1_2:14649743-14649762 | None:intergenic | 45.0% | |
| ! | CTCTGTCTCTGAAAAGCCAA+GGG | + | chr1_2:14649892-14649911 | Msa0058320:CDS | 45.0% |
| ! | TCTGTCTCTGAAAAGCCAAG+GGG | + | chr1_2:14649893-14649912 | Msa0058320:CDS | 45.0% |
| ! | TTGATGGCCAGTGGTATACA+TGG | + | chr1_2:14649985-14650004 | Msa0058320:CDS | 45.0% |
| CAGGTTAGAAGTTAGGCCTT+TGG | + | chr1_2:14650262-14650281 | Msa0058320:exon | 45.0% | |
| ! | AATGGATGTTGGCTACCCAA+AGG | - | chr1_2:14650281-14650300 | None:intergenic | 45.0% |
| ! | CCCAATGTTTTCCCAATTCG+AGG | + | chr1_2:14650413-14650432 | Msa0058320:three_prime_UTR | 45.0% |
| GCCTCGAATTGGGAAAACAT+TGG | - | chr1_2:14650417-14650436 | None:intergenic | 45.0% | |
| TTCCCAATTCGAGGCAATTG+AGG | + | chr1_2:14650422-14650441 | Msa0058320:three_prime_UTR | 45.0% | |
| !! | AAAAAAAAAAAAATCAAATT+AGG | + | chr1_2:14646516-14646535 | Msa0058320:intron | 5.0% |
| !! | TTAAAAAAAAAAGATTAAAT+AGG | + | chr1_2:14647357-14647376 | Msa0058320:intron | 5.0% |
| !!! | TAAGAAAATATTTTTTTTTA+TGG | + | chr1_2:14648591-14648610 | Msa0058320:intron | 5.0% |
| !!! | AAGAAAATATTTTTTTTTAT+GGG | + | chr1_2:14648592-14648611 | Msa0058320:intron | 5.0% |
| !!! | TTTTTATAAATAAGTAAAAT+CGG | + | chr1_2:14648811-14648830 | Msa0058320:intron | 5.0% |
| !! | GTTGTTTTGTTACGGCCTGG+TGG | - | chr1_2:14642971-14642990 | None:intergenic | 50.0% |
| CCAGGCCGTAACAAAACAAC+CGG | + | chr1_2:14642971-14642990 | Msa0058320:five_prime_UTR | 50.0% | |
| CAGGCCGTAACAAAACAACC+GGG | + | chr1_2:14642972-14642991 | Msa0058320:five_prime_UTR | 50.0% | |
| !! | GAAGAGGGAGTGCTGTTTAG+TGG | - | chr1_2:14643021-14643040 | None:intergenic | 50.0% |
| !! | CGAGCTGGTACTGATGAGAA+TGG | - | chr1_2:14643142-14643161 | None:intergenic | 50.0% |
| ! | TTTTAGGCTTCGTAAGCGGC+GGG | - | chr1_2:14643218-14643237 | None:intergenic | 50.0% |
| !! | GTTTTAGGCTTCGTAAGCGG+CGG | - | chr1_2:14643219-14643238 | None:intergenic | 50.0% |
| !!! | GTTGGGGTTTTGGGAGCTTA+GGG | - | chr1_2:14643248-14643267 | None:intergenic | 50.0% |
| ! | AGGGTTAGGGTTGGGGTTTT+GGG | - | chr1_2:14643257-14643276 | None:intergenic | 50.0% |
| ! | TAGGGTTAGGGTTGGGGTTT+TGG | - | chr1_2:14643258-14643277 | None:intergenic | 50.0% |
| ! | TGTTTGAGGTGAGGAAACGG+TGG | - | chr1_2:14643333-14643352 | None:intergenic | 50.0% |
| GTTTCCTTGGGGAGATCTTC+GGG | - | chr1_2:14643394-14643413 | None:intergenic | 50.0% | |
| CGTTTCCTTGGGGAGATCTT+CGG | - | chr1_2:14643395-14643414 | None:intergenic | 50.0% | |
| CCCAAGTGGAAGCAACGATA+AGG | - | chr1_2:14643423-14643442 | None:intergenic | 50.0% | |
| GTTGCTTCCACTTGGGAAGA+CGG | + | chr1_2:14643427-14643446 | Msa0058320:CDS | 50.0% | |
| ! | TGGTTTTCCGTCTTCCCAAG+TGG | - | chr1_2:14643437-14643456 | None:intergenic | 50.0% |
| !! | ATTCTTCGCCGATTGGCTTG+CGG | + | chr1_2:14643471-14643490 | Msa0058320:CDS | 50.0% |
| ! | TGTGAAACGGATGAAGGCGT+TGG | + | chr1_2:14643609-14643628 | Msa0058320:CDS | 50.0% |
| !! | GTGAAACGGATGAAGGCGTT+GGG | + | chr1_2:14643610-14643629 | Msa0058320:CDS | 50.0% |
| TCAACATCTCCTTCCCCCAA+CGG | - | chr1_2:14643652-14643671 | None:intergenic | 50.0% | |
| TTGGGGGAAGGAGATGTTGA+TGG | + | chr1_2:14643652-14643671 | Msa0058320:CDS | 50.0% | |
| !! | AGGAGATGTTGATGGTGGTG+AGG | + | chr1_2:14643660-14643679 | Msa0058320:CDS | 50.0% |
| !! | AGATGTTGATGGTGGTGAGG+TGG | + | chr1_2:14643663-14643682 | Msa0058320:CDS | 50.0% |
| AAGTGGTGTGGGAAGGTTGT+TGG | + | chr1_2:14643700-14643719 | Msa0058320:CDS | 50.0% | |
| GAGAATGCTGAGGAGGAAAG+CGG | + | chr1_2:14643757-14643776 | Msa0058320:CDS | 50.0% | |
| AGAGTCTGATGAGGAGGAAG+AGG | + | chr1_2:14643801-14643820 | Msa0058320:CDS | 50.0% | |
| !! | CTTCCTCGAAGGTGCTTTAC+CGG | - | chr1_2:14643860-14643879 | None:intergenic | 50.0% |
| ! | TAAAGCACCTTCGAGGAAGC+TGG | + | chr1_2:14643861-14643880 | Msa0058320:CDS | 50.0% |
| GCTACGGTGAAGGAGAGTAA+TGG | + | chr1_2:14643886-14643905 | Msa0058320:CDS | 50.0% | |
| GCGAAAGCTACACTCTGGTT+TGG | + | chr1_2:14644196-14644215 | Msa0058320:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr1_2:14644378-14644397 | Msa0058320:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1_2:14644386-14644405 | None:intergenic | 50.0% |
| TGGACTAAGTCACAGCTTCG+AGG | + | chr1_2:14644549-14644568 | Msa0058320:CDS | 50.0% | |
| ! | CACACCCAACTTTTCGCTAC+TGG | - | chr1_2:14645230-14645249 | None:intergenic | 50.0% |
| CAGTAGCGAAAAGTTGGGTG+TGG | + | chr1_2:14645228-14645247 | Msa0058320:CDS | 50.0% | |
| GAAAAGTTGGGTGTGGGAGA+TGG | + | chr1_2:14645235-14645254 | Msa0058320:CDS | 50.0% | |
| GACGCTGACACATTGTTGTC+AGG | + | chr1_2:14645374-14645393 | Msa0058320:intron | 50.0% | |
| ! | CTACAGCTAGAGCTAGTCTC+CGG | - | chr1_2:14645490-14645509 | None:intergenic | 50.0% |
| !! | ACTAGCGGTATCGATAACGG+CGG | - | chr1_2:14646108-14646127 | None:intergenic | 50.0% |
| GCATGATCTGAAAATCGCCG+CGG | + | chr1_2:14646187-14646206 | Msa0058320:intron | 50.0% | |
| GAAAATCGCCGCGGATAGAA+TGG | + | chr1_2:14646196-14646215 | Msa0058320:intron | 50.0% | |
| CGTGTCTTCCATTCTATCCG+CGG | - | chr1_2:14646207-14646226 | Msa0058330:CDS | 50.0% | |
| GGAAGATTTCATGGCATGGC+TGG | - | chr1_2:14646326-14646345 | Msa0058330:CDS | 50.0% | |
| CTGAGAGGCCTAGAGTTGTT+CGG | - | chr1_2:14646636-14646655 | Msa0058330:CDS | 50.0% | |
| AACAACTCTAGGCCTCTCAG+TGG | + | chr1_2:14646636-14646655 | Msa0058320:intron | 50.0% | |
| ACAACTCTAGGCCTCTCAGT+GGG | + | chr1_2:14646637-14646656 | Msa0058320:intron | 50.0% | |
| CAAGACAAAAGCCCACTGAG+AGG | - | chr1_2:14646651-14646670 | Msa0058330:CDS | 50.0% | |
| !! | CTCTCAGTGGGCTTTTGTCT+TGG | + | chr1_2:14646649-14646668 | Msa0058320:intron | 50.0% |
| ! | TGGGCTTTTGTCTTGGTTGC+CGG | + | chr1_2:14646656-14646675 | Msa0058320:intron | 50.0% |
| AAAGCTCCGATTACCGTCTC+TGG | - | chr1_2:14646841-14646860 | Msa0058330:CDS | 50.0% | |
| !! | GACGATCTCTGCTGATTCGT+TGG | + | chr1_2:14647001-14647020 | Msa0058320:intron | 50.0% |
| TGGCAGCGTTATTGCATCTG+AGG | + | chr1_2:14647057-14647076 | Msa0058320:intron | 50.0% | |
| CAGCGTTATTGCATCTGAGG+TGG | + | chr1_2:14647060-14647079 | Msa0058320:intron | 50.0% | |
| ! | GGACGGAGGGAGTATATTGT+TGG | + | chr1_2:14647447-14647466 | Msa0058320:intron | 50.0% |
| CAGATGTTAGCCCATCTGAG+AGG | + | chr1_2:14647852-14647871 | Msa0058320:intron | 50.0% | |
| ATGTTAGCCCATCTGAGAGG+AGG | + | chr1_2:14647855-14647874 | Msa0058320:intron | 50.0% | |
| GATGGATCATTTCGCCTACC+TGG | - | chr1_2:14647964-14647983 | None:intergenic | 50.0% | |
| TTTGTGGATAGTGACAGGCC+CGG | - | chr1_2:14648025-14648044 | None:intergenic | 50.0% | |
| TGCTGGAGTATGGCCGAATT+TGG | + | chr1_2:14648250-14648269 | Msa0058320:intron | 50.0% | |
| TGGAGTATGGCCGAATTTGG+TGG | + | chr1_2:14648253-14648272 | Msa0058320:intron | 50.0% | |
| GGAGTATGGCCGAATTTGGT+GGG | + | chr1_2:14648254-14648273 | Msa0058320:intron | 50.0% | |
| ! | GAGTATGGCCGAATTTGGTG+GGG | + | chr1_2:14648255-14648274 | Msa0058320:intron | 50.0% |
| ! | AGTATGGCCGAATTTGGTGG+GGG | + | chr1_2:14648256-14648275 | Msa0058320:intron | 50.0% |
| ACCTCGGAGCGATTAACTGA+AGG | + | chr1_2:14648951-14648970 | Msa0058320:CDS | 50.0% | |
| GTTGCTGAAGCCTATTACCC+AGG | + | chr1_2:14649115-14649134 | Msa0058320:CDS | 50.0% | |
| CAGTGTAGATGCCGGAACAA+AGG | + | chr1_2:14649226-14649245 | Msa0058320:CDS | 50.0% | |
| TCAGAGCAGTCAAGGAATCC+TGG | - | chr1_2:14649570-14649589 | None:intergenic | 50.0% | |
| GGATTCCTTGACTGCTCTGA+AGG | + | chr1_2:14649570-14649589 | Msa0058320:intron | 50.0% | |
| ATCCTTTCACAAGGGTCAGG+CGG | - | chr1_2:14649618-14649637 | None:intergenic | 50.0% | |
| TCCATCCTTTCACAAGGGTC+AGG | - | chr1_2:14649621-14649640 | None:intergenic | 50.0% | |
| TGCCGACGTGAAAGCTTTCT+CGG | + | chr1_2:14649866-14649885 | Msa0058320:CDS | 50.0% | |
| CTCCGAGAAAGCTTTCACGT+CGG | - | chr1_2:14649871-14649890 | None:intergenic | 50.0% | |
| ! | GCTCTGTCTCTGAAAAGCCA+AGG | + | chr1_2:14649891-14649910 | Msa0058320:CDS | 50.0% |
| AGGCAACTTCATACTCCCCT+TGG | - | chr1_2:14649911-14649930 | None:intergenic | 50.0% | |
| ACACGAGTGAACATGCTCAC+AGG | - | chr1_2:14649931-14649950 | None:intergenic | 50.0% | |
| TCACTCGTGTTGTGTCCTCT+TGG | + | chr1_2:14649941-14649960 | Msa0058320:CDS | 50.0% | |
| ACCTTCCTCAGCTCCATAGA+CGG | - | chr1_2:14650178-14650197 | None:intergenic | 50.0% | |
| ! | GAGGAAGGTGGATTTGATCC+AGG | + | chr1_2:14650189-14650208 | Msa0058320:CDS | 50.0% |
| AAGTCGAGCCGCAAAGAATC+AGG | + | chr1_2:14650243-14650262 | Msa0058320:CDS | 50.0% | |
| !! | CCGGTTGTTTTGTTACGGCC+TGG | - | chr1_2:14642974-14642993 | None:intergenic | 55.0% |
| TCGTGTGAGTGTGAGTGTGG+CGG | - | chr1_2:14643075-14643094 | None:intergenic | 55.0% | |
| !!! | GGTTGGGGTTTTGGGAGCTT+AGG | - | chr1_2:14643249-14643268 | None:intergenic | 55.0% |
| ! | GAGGCGGTTAGAGAGGGTTT+TGG | - | chr1_2:14643311-14643330 | None:intergenic | 55.0% |
| TTGAGGTGAGGAAACGGTGG+AGG | - | chr1_2:14643330-14643349 | None:intergenic | 55.0% | |
| CGAACTCTCCGCAAGCCAAT+CGG | - | chr1_2:14643482-14643501 | None:intergenic | 55.0% | |
| !! | CGATTGGCTTGCGGAGAGTT+CGG | + | chr1_2:14643480-14643499 | Msa0058320:CDS | 55.0% |
| !! | GTATTCGGTGTCGGTAGTGG+AGG | + | chr1_2:14643550-14643569 | Msa0058320:CDS | 55.0% |
| !! | GGTGTCGGTAGTGGAGGTTA+TGG | + | chr1_2:14643556-14643575 | Msa0058320:CDS | 55.0% |
| !! | AAACGGATGAAGGCGTTGGG+TGG | + | chr1_2:14643613-14643632 | Msa0058320:CDS | 55.0% |
| GAGATGATTCCGTTGGGGGA+AGG | + | chr1_2:14643640-14643659 | Msa0058320:CDS | 55.0% | |
| ! | GGGGAAGGAGATGTTGATGG+TGG | + | chr1_2:14643655-14643674 | Msa0058320:CDS | 55.0% |
| !! | TGATGGTGGTGAGGTGGATG+AGG | + | chr1_2:14643669-14643688 | Msa0058320:CDS | 55.0% |
| GTCTGATGAGGAGGAAGAGG+CGG | + | chr1_2:14643804-14643823 | Msa0058320:CDS | 55.0% | |
| ! | TTGCCGGTAAAGCACCTTCG+AGG | + | chr1_2:14643854-14643873 | Msa0058320:CDS | 55.0% |
| TTCGAGGAAGCTGGTGGCTA+CGG | + | chr1_2:14643870-14643889 | Msa0058320:CDS | 55.0% | |
| AAGTCACAGCTTCGAGGTCG+AGG | + | chr1_2:14644555-14644574 | Msa0058320:CDS | 55.0% | |
| !! | CGGTGTTGGTGCATCTAAGG+CGG | - | chr1_2:14646088-14646107 | None:intergenic | 55.0% |
| !! | GGTATCGATAACGGCGGTGT+TGG | - | chr1_2:14646102-14646121 | None:intergenic | 55.0% |
| !! | CACGGTCTCCGTTGATTCGT+TGG | - | chr1_2:14646147-14646166 | Msa0058330:CDS | 55.0% |
| CAACGAATCAACGGAGACCG+TGG | + | chr1_2:14646145-14646164 | Msa0058320:intron | 55.0% | |
| CAGCTTCTCTCTCACAGCCA+CGG | - | chr1_2:14646165-14646184 | Msa0058330:CDS | 55.0% | |
| CCTTGGATTGCGGTTAAGGG+AGG | - | chr1_2:14646482-14646501 | Msa0058330:CDS | 55.0% | |
| CCTCCCTTAACCGCAATCCA+AGG | + | chr1_2:14646479-14646498 | Msa0058320:intron | 55.0% | |
| !! | TCTGGTCTGGTCTTGTCCAG+TGG | + | chr1_2:14647999-14648018 | Msa0058320:intron | 55.0% |
| CAGAGCTGTTGTTCGCGTGT+CGG | + | chr1_2:14648349-14648368 | Msa0058320:intron | 55.0% | |
| GCCTTCAGTTAATCGCTCCG+AGG | - | chr1_2:14648955-14648974 | None:intergenic | 55.0% | |
| TACCGCCTGACCCTTGTGAA+AGG | + | chr1_2:14649613-14649632 | Msa0058320:CDS | 55.0% | |
| GCCTGACCCTTGTGAAAGGA+TGG | + | chr1_2:14649617-14649636 | Msa0058320:CDS | 55.0% | |
| CTTTCACGTCGGCATGCCAA+GGG | - | chr1_2:14649860-14649879 | None:intergenic | 55.0% | |
| CGACGTGAAAGCTTTCTCGG+AGG | + | chr1_2:14649869-14649888 | Msa0058320:CDS | 55.0% | |
| GTCTATGGAGCTGAGGAAGG+TGG | + | chr1_2:14650177-14650196 | Msa0058320:CDS | 55.0% | |
| !! | TACGGCCTGGTGGGCTTTAG+CGG | - | chr1_2:14642961-14642980 | None:intergenic | 60.0% |
| TGTGAGTGTGAGTGTGGCGG+TGG | - | chr1_2:14643072-14643091 | None:intergenic | 60.0% | |
| GCGTCGTGTGAGTGTGAGTG+TGG | - | chr1_2:14643078-14643097 | None:intergenic | 60.0% | |
| ! | TTGTGGCGGAGAAGAGAGCG+AGG | - | chr1_2:14643174-14643193 | None:intergenic | 60.0% |
| ACGGTGGAGGCGGTTAGAGA+GGG | - | chr1_2:14643317-14643336 | None:intergenic | 60.0% | |
| AACGGTGGAGGCGGTTAGAG+AGG | - | chr1_2:14643318-14643337 | None:intergenic | 60.0% | |
| AGGTGAGGAAACGGTGGAGG+CGG | - | chr1_2:14643327-14643346 | None:intergenic | 60.0% | |
| CGAACCCGAAGATCTCCCCA+AGG | + | chr1_2:14643387-14643406 | Msa0058320:CDS | 60.0% | |
| GGAAGACGGAAAACCACCGC+CGG | + | chr1_2:14643441-14643460 | Msa0058320:CDS | 60.0% | |
| !! | TTGGCTTGCGGAGAGTTCGG+AGG | + | chr1_2:14643483-14643502 | Msa0058320:CDS | 60.0% |
| !! | GCGGTATTCGGTGTCGGTAG+TGG | + | chr1_2:14643547-14643566 | Msa0058320:CDS | 60.0% |
| TGAGGAGGAAGAGGCGGAGT+CGG | + | chr1_2:14643810-14643829 | Msa0058320:CDS | 60.0% | |
| AGCACCTTCGAGGAAGCTGG+TGG | + | chr1_2:14643864-14643883 | Msa0058320:CDS | 60.0% | |
| GTAGCCACCAGCTTCCTCGA+AGG | - | chr1_2:14643871-14643890 | None:intergenic | 60.0% | |
| GAAGCTGGTGGCTACGGTGA+AGG | + | chr1_2:14643876-14643895 | Msa0058320:CDS | 60.0% | |
| TCACAGCTTCGAGGTCGAGG+TGG | + | chr1_2:14644558-14644577 | Msa0058320:CDS | 60.0% | |
| CATGGAGGCAACCCCTAGCT+TGG | + | chr1_2:14645160-14645179 | Msa0058320:CDS | 60.0% | |
| !! | CGGCGGTGTTGGTGCATCTA+AGG | - | chr1_2:14646091-14646110 | None:intergenic | 60.0% |
| TGGGCCGTCAACCAAGGCAA+AGG | - | chr1_2:14646306-14646325 | Msa0058330:CDS | 60.0% | |
| !! | GTCTGGTCTTGTCCAGTGGC+CGG | + | chr1_2:14648003-14648022 | Msa0058320:intron | 60.0% |
| !! | TCTGGTCTTGTCCAGTGGCC+GGG | + | chr1_2:14648004-14648023 | Msa0058320:intron | 60.0% |
| CCATACTCCAGCACGCGAAG+GGG | - | chr1_2:14648243-14648262 | None:intergenic | 60.0% | |
| GCCATACTCCAGCACGCGAA+GGG | - | chr1_2:14648244-14648263 | None:intergenic | 60.0% | |
| ! | ATGGCCGAATTTGGTGGGGG+CGG | + | chr1_2:14648259-14648278 | Msa0058320:intron | 60.0% |
| CTTGCCGCCCCCACCAAATT+CGG | - | chr1_2:14648266-14648285 | None:intergenic | 60.0% | |
| ! | GAATTTGGTGGGGGCGGCAA+GGG | + | chr1_2:14648265-14648284 | Msa0058320:intron | 60.0% |
| GCAGTCGCCCCTTCTTCAGA+TGG | - | chr1_2:14649472-14649491 | None:intergenic | 60.0% | |
| TCAGGCGGTATACAGTGCGC+TGG | - | chr1_2:14649603-14649622 | None:intergenic | 60.0% | |
| GCTTTCACGTCGGCATGCCA+AGG | - | chr1_2:14649861-14649880 | None:intergenic | 60.0% | |
| ACATGGCTGCCACACCATCC+TGG | + | chr1_2:14650151-14650170 | Msa0058320:CDS | 60.0% | |
| CATGGCTGCCACACCATCCT+GGG | + | chr1_2:14650152-14650171 | Msa0058320:CDS | 60.0% | |
| ATAGACGGCCCAGGATGGTG+TGG | - | chr1_2:14650163-14650182 | None:intergenic | 60.0% | |
| ACACCATCCTGGGCCGTCTA+TGG | + | chr1_2:14650162-14650181 | Msa0058320:CDS | 60.0% | |
| GCCGTCTATGGAGCTGAGGA+AGG | + | chr1_2:14650174-14650193 | Msa0058320:CDS | 60.0% | |
| GCAGACCGCTAAAGCCCACC+AGG | + | chr1_2:14642953-14642972 | Msa0058320:five_prime_UTR | 65.0% | |
| CGGTGGAAAACGCCGTGGGA+GGG | - | chr1_2:14643055-14643074 | None:intergenic | 65.0% | |
| GTGGCGGTGGAAAACGCCGT+GGG | - | chr1_2:14643059-14643078 | None:intergenic | 65.0% | |
| TGTGGCGGTGGAAAACGCCG+TGG | - | chr1_2:14643060-14643079 | None:intergenic | 65.0% | |
| ! | GCGAGGAGTGTGAGACGAGC+TGG | - | chr1_2:14643157-14643176 | None:intergenic | 65.0% |
| CATGGCTGGGCCGTCAACCA+AGG | - | chr1_2:14646312-14646331 | Msa0058330:CDS | 65.0% | |
| ATAGTGACAGGCCCGGCCAC+TGG | - | chr1_2:14648018-14648037 | None:intergenic | 65.0% | |
| TACTCCAGCACGCGAAGGGG+AGG | - | chr1_2:14648240-14648259 | None:intergenic | 65.0% | |
| CCCCTTCGCGTGCTGGAGTA+TGG | + | chr1_2:14648240-14648259 | Msa0058320:intron | 65.0% | |
| GGCCATACTCCAGCACGCGA+AGG | - | chr1_2:14648245-14648264 | None:intergenic | 65.0% | |
| ! | CGAATTTGGTGGGGGCGGCA+AGG | + | chr1_2:14648264-14648283 | Msa0058320:intron | 65.0% |
| TGAAGAAGGGGCGACTGCGC+TGG | + | chr1_2:14649474-14649493 | Msa0058320:intron | 65.0% | |
| GCTCCATAGACGGCCCAGGA+TGG | - | chr1_2:14650168-14650187 | None:intergenic | 65.0% | |
| CTCAGCTCCATAGACGGCCC+AGG | - | chr1_2:14650172-14650191 | None:intergenic | 65.0% | |
| CTGGGCCGTCTATGGAGCTG+AGG | + | chr1_2:14650170-14650189 | Msa0058320:CDS | 65.0% | |
| GCGGTGGAAAACGCCGTGGG+AGG | - | chr1_2:14643056-14643075 | None:intergenic | 70.0% | |
| CTTGCCTCCCCTTCGCGTGC+TGG | + | chr1_2:14648233-14648252 | Msa0058320:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 14642953 | 14650686 | 14642953 | ID=Msa0058320;Name=Msa0058320 |
| chr1_2 | mRNA | 14642953 | 14650686 | 14642953 | ID=Msa0058320-mRNA-1;Parent=Msa0058320;Name=Msa0058320-mRNA-1;_AED=0.11;_eAED=0.11;_QI=183|1|1|1|0.75|0.66|9|397|641 |
| chr1_2 | exon | 14642953 | 14643969 | 14642953 | ID=Msa0058320-mRNA-1:exon:5898;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14644504 | 14644619 | 14644504 | ID=Msa0058320-mRNA-1:exon:5899;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14645157 | 14645332 | 14645157 | ID=Msa0058320-mRNA-1:exon:5900;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14648946 | 14649136 | 14648946 | ID=Msa0058320-mRNA-1:exon:5901;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14649218 | 14649304 | 14649218 | ID=Msa0058320-mRNA-1:exon:5902;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14649571 | 14649728 | 14649571 | ID=Msa0058320-mRNA-1:exon:5903;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14649824 | 14650034 | 14649824 | ID=Msa0058320-mRNA-1:exon:5904;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14650117 | 14650466 | 14650117 | ID=Msa0058320-mRNA-1:exon:5905;Parent=Msa0058320-mRNA-1 |
| chr1_2 | exon | 14650487 | 14650686 | 14650487 | ID=Msa0058320-mRNA-1:exon:5906;Parent=Msa0058320-mRNA-1 |
| chr1_2 | five_prime_UTR | 14642953 | 14643135 | 14642953 | ID=Msa0058320-mRNA-1:five_prime_utr;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14643136 | 14643969 | 14643136 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14644504 | 14644619 | 14644504 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14645157 | 14645332 | 14645157 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14648946 | 14649136 | 14648946 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14649218 | 14649304 | 14649218 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14649571 | 14649728 | 14649571 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14649824 | 14650034 | 14649824 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | CDS | 14650117 | 14650269 | 14650117 | ID=Msa0058320-mRNA-1:cds;Parent=Msa0058320-mRNA-1 |
| chr1_2 | three_prime_UTR | 14650270 | 14650466 | 14650270 | ID=Msa0058320-mRNA-1:three_prime_utr;Parent=Msa0058320-mRNA-1 |
| chr1_2 | three_prime_UTR | 14650487 | 14650686 | 14650487 | ID=Msa0058320-mRNA-1:three_prime_utr;Parent=Msa0058320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
