Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229230 | XP_003608509.1 | 99.764 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229230 | sp|O22466|MSI1_SOLLC | 90.238 | 420 | 41 | 0 | 1 | 420 | 1 | 420 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229230 | G7JE05 | 99.764 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0229230 | 0.841519 | 4.524617e-58 | -8.615850e-47 |
| Msa0003700 | Msa0229230 | 0.811294 | 7.522294e-51 | -8.615850e-47 |
| Msa0014990 | Msa0229230 | 0.831048 | 2.081315e-55 | -8.615850e-47 |
| Msa0017770 | Msa0229230 | -0.840701 | 7.418930e-58 | -8.615850e-47 |
| Msa0026130 | Msa0229230 | 0.800551 | 1.366890e-48 | -8.615850e-47 |
| Msa0026800 | Msa0229230 | 0.829239 | 5.754079e-55 | -8.615850e-47 |
| Msa0027230 | Msa0229230 | 0.819631 | 1.049143e-52 | -8.615850e-47 |
| Msa0027260 | Msa0229230 | 0.819442 | 1.159123e-52 | -8.615850e-47 |
| Msa0028420 | Msa0229230 | 0.852166 | 5.516418e-61 | -8.615850e-47 |
| Msa0032430 | Msa0229230 | 0.825937 | 3.568565e-54 | -8.615850e-47 |
| Msa0035340 | Msa0229230 | 0.806863 | 6.689895e-50 | -8.615850e-47 |
| Msa0042610 | Msa0229230 | 0.827695 | 1.357317e-54 | -8.615850e-47 |
| Msa0044000 | Msa0229230 | 0.804014 | 2.646675e-49 | -8.615850e-47 |
| Msa0047030 | Msa0229230 | 0.831408 | 1.698037e-55 | -8.615850e-47 |
| Msa0049370 | Msa0229230 | 0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0055190 | Msa0229230 | 0.823949 | 1.051349e-53 | -8.615850e-47 |
| Msa0056470 | Msa0229230 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
| Msa0058320 | Msa0229230 | 0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0061080 | Msa0229230 | 0.800653 | 1.302774e-48 | -8.615850e-47 |
| Msa0074350 | Msa0229230 | 0.810476 | 1.131271e-50 | -8.615850e-47 |
| Msa0075220 | Msa0229230 | 0.826002 | 3.444733e-54 | -8.615850e-47 |
| Msa0081090 | Msa0229230 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0089630 | Msa0229230 | 0.814904 | 1.214948e-51 | -8.615850e-47 |
| Msa0090360 | Msa0229230 | 0.828072 | 1.101829e-54 | -8.615850e-47 |
| Msa0090400 | Msa0229230 | 0.844374 | 7.865809e-59 | -8.615850e-47 |
| Msa0092790 | Msa0229230 | 0.837996 | 3.737446e-57 | -8.615850e-47 |
| Msa0101500 | Msa0229230 | -0.837966 | 3.804941e-57 | -8.615850e-47 |
| Msa0101590 | Msa0229230 | 0.804275 | 2.336013e-49 | -8.615850e-47 |
| Msa0105370 | Msa0229230 | 0.823448 | 1.377420e-53 | -8.615850e-47 |
| Msa0109460 | Msa0229230 | 0.825777 | 3.896147e-54 | -8.615850e-47 |
| Msa0114870 | Msa0229230 | 0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa0115080 | Msa0229230 | 0.803166 | 3.969130e-49 | -8.615850e-47 |
| Msa0117480 | Msa0229230 | 0.801419 | 9.084689e-49 | -8.615850e-47 |
| Msa0122510 | Msa0229230 | 0.813429 | 2.571315e-51 | -8.615850e-47 |
| Msa0122970 | Msa0229230 | 0.833832 | 4.251581e-56 | -8.615850e-47 |
| Msa0124060 | Msa0229230 | 0.861459 | 1.010632e-63 | -8.615850e-47 |
| Msa0124280 | Msa0229230 | 0.806178 | 9.332820e-50 | -8.615850e-47 |
| Msa0127050 | Msa0229230 | 0.804633 | 1.966709e-49 | -8.615850e-47 |
| Msa0127800 | Msa0229230 | 0.817331 | 3.485416e-52 | -8.615850e-47 |
| Msa0137840 | Msa0229230 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa0137880 | Msa0229230 | 0.857045 | 2.131862e-62 | -8.615850e-47 |
| Msa0140820 | Msa0229230 | 0.850502 | 1.628882e-60 | -8.615850e-47 |
| Msa0145440 | Msa0229230 | 0.823793 | 1.143843e-53 | -8.615850e-47 |
| Msa0148060 | Msa0229230 | 0.829370 | 5.346175e-55 | -8.615850e-47 |
| Msa0167520 | Msa0229230 | 0.818593 | 1.807859e-52 | -8.615850e-47 |
| Msa0168500 | Msa0229230 | 0.854345 | 1.309738e-61 | -8.615850e-47 |
| Msa0169310 | Msa0229230 | 0.813598 | 2.359963e-51 | -8.615850e-47 |
| Msa0172070 | Msa0229230 | 0.819927 | 8.981981e-53 | -8.615850e-47 |
| Msa0175780 | Msa0229230 | 0.812176 | 4.836249e-51 | -8.615850e-47 |
| Msa0182240 | Msa0229230 | 0.808300 | 3.314643e-50 | -8.615850e-47 |
| Msa0184040 | Msa0229230 | 0.820588 | 6.336789e-53 | -8.615850e-47 |
| Msa0211150 | Msa0229230 | 0.825237 | 5.230962e-54 | -8.615850e-47 |
| Msa0223080 | Msa0229230 | 0.813088 | 3.055406e-51 | -8.615850e-47 |
| Msa0225100 | Msa0229230 | 0.810288 | 1.241582e-50 | -8.615850e-47 |
| Msa0226540 | Msa0229230 | 0.814882 | 1.228194e-51 | -8.615850e-47 |
| Msa0229230 | Msa0231650 | 0.802247 | 6.140822e-49 | -8.615850e-47 |
| Msa0229230 | Msa0231980 | 0.816101 | 6.577562e-52 | -8.615850e-47 |
| Msa0229230 | Msa0232010 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
| Msa0229230 | Msa0232050 | 0.812824 | 3.491247e-51 | -8.615850e-47 |
| Msa0229230 | Msa0232080 | 0.818972 | 1.482825e-52 | -8.615850e-47 |
| Msa0229230 | Msa0239190 | 0.810290 | 1.240796e-50 | -8.615850e-47 |
| Msa0229230 | Msa0249860 | 0.807168 | 5.765582e-50 | -8.615850e-47 |
| Msa0229230 | Msa0255090 | 0.853129 | 2.929978e-61 | -8.615850e-47 |
| Msa0229230 | Msa0259380 | 0.846269 | 2.414817e-59 | -8.615850e-47 |
| Msa0229230 | Msa0264150 | 0.805376 | 1.375549e-49 | -8.615850e-47 |
| Msa0229230 | Msa0267110 | 0.843683 | 1.205454e-58 | -8.615850e-47 |
| Msa0229230 | Msa0272490 | 0.843457 | 1.385124e-58 | -8.615850e-47 |
| Msa0229230 | Msa0277180 | 0.811777 | 5.906853e-51 | -8.615850e-47 |
| Msa0229230 | Msa0280610 | 0.841796 | 3.823278e-58 | -8.615850e-47 |
| Msa0229230 | Msa0283800 | 0.824346 | 8.483614e-54 | -8.615850e-47 |
| Msa0229230 | Msa0287740 | 0.828780 | 7.431911e-55 | -8.615850e-47 |
| Msa0229230 | Msa0292330 | 0.843898 | 1.055596e-58 | -8.615850e-47 |
| Msa0229230 | Msa0292400 | 0.811528 | 6.694315e-51 | -8.615850e-47 |
| Msa0229230 | Msa0294160 | 0.808018 | 3.806311e-50 | -8.615850e-47 |
| Msa0229230 | Msa0302160 | 0.811682 | 6.195475e-51 | -8.615850e-47 |
| Msa0229230 | Msa0302170 | 0.813395 | 2.616492e-51 | -8.615850e-47 |
| Msa0229230 | Msa0312700 | 0.850356 | 1.790934e-60 | -8.615850e-47 |
| Msa0229230 | Msa0313500 | 0.818104 | 2.333115e-52 | -8.615850e-47 |
| Msa0229230 | Msa0316810 | 0.802795 | 4.734245e-49 | -8.615850e-47 |
| Msa0229230 | Msa0321920 | 0.802112 | 6.548793e-49 | -8.615850e-47 |
| Msa0229230 | Msa0334550 | 0.825492 | 4.551065e-54 | -8.615850e-47 |
| Msa0229230 | Msa0335730 | 0.832859 | 7.432069e-56 | -8.615850e-47 |
| Msa0229230 | Msa0339490 | 0.809357 | 1.969171e-50 | -8.615850e-47 |
| Msa0229230 | Msa0339500 | 0.816922 | 4.308231e-52 | -8.615850e-47 |
| Msa0229230 | Msa0340960 | 0.824895 | 6.298542e-54 | -8.615850e-47 |
| Msa0229230 | Msa0342310 | 0.806276 | 8.896713e-50 | -8.615850e-47 |
| Msa0229230 | Msa0349710 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa0229230 | Msa0350880 | 0.800091 | 1.695336e-48 | -8.615850e-47 |
| Msa0229230 | Msa0369450 | 0.842372 | 2.692895e-58 | -8.615850e-47 |
| Msa0229230 | Msa0379770 | 0.842487 | 2.509175e-58 | -8.615850e-47 |
| Msa0229230 | Msa0380300 | 0.835681 | 1.456377e-56 | -8.615850e-47 |
| Msa0229230 | Msa0386090 | 0.812969 | 3.243448e-51 | -8.615850e-47 |
| Msa0229230 | Msa0387820 | 0.800809 | 1.210605e-48 | -8.615850e-47 |
| Msa0229230 | Msa0388700 | 0.803972 | 2.701163e-49 | -8.615850e-47 |
| Msa0229230 | Msa0395820 | 0.866004 | 3.913948e-65 | -8.615850e-47 |
| Msa0229230 | Msa0402650 | 0.822371 | 2.454918e-53 | -8.615850e-47 |
| Msa0229230 | Msa0402790 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0229230 | Msa0418270 | 0.806062 | 9.872539e-50 | -8.615850e-47 |
| Msa0229230 | Msa0419410 | 0.815640 | 8.336410e-52 | -8.615850e-47 |
| Msa0229230 | Msa0419700 | 0.803269 | 3.778521e-49 | -8.615850e-47 |
| Msa0229230 | Msa0428020 | 0.809889 | 1.513676e-50 | -8.615850e-47 |
| Msa0229230 | Msa0428150 | 0.827124 | 1.859892e-54 | -8.615850e-47 |
| Msa0229230 | Msa0428590 | 0.828593 | 8.246701e-55 | -8.615850e-47 |
| Msa0229230 | Msa0436490 | -0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0229230 | Msa0449210 | 0.842510 | 2.474668e-58 | -8.615850e-47 |
| Msa0229230 | Msa0462500 | 0.820719 | 5.912586e-53 | -8.615850e-47 |
| Msa0229230 | Msa0468330 | 0.865572 | 5.358638e-65 | -8.615850e-47 |
| Msa0229230 | Msa0474520 | 0.822477 | 2.319859e-53 | -8.615850e-47 |
| Msa0229230 | Msa0476650 | 0.804066 | 2.581823e-49 | -8.615850e-47 |
| Msa0229230 | Msa0481530 | 0.831706 | 1.433565e-55 | -8.615850e-47 |
| Msa0229230 | Msa0487420 | 0.814464 | 1.520042e-51 | -8.615850e-47 |
| Msa0229230 | Msa0493410 | 0.815003 | 1.154832e-51 | -8.615850e-47 |
| Msa0229230 | Msa0497210 | 0.814588 | 1.427342e-51 | -8.615850e-47 |
| Msa0229230 | Msa0497490 | 0.834141 | 3.558823e-56 | -8.615850e-47 |
| Msa0229230 | Msa0512340 | 0.821559 | 3.786167e-53 | -8.615850e-47 |
| Msa0229230 | Msa0518390 | 0.840131 | 1.045985e-57 | -8.615850e-47 |
| Msa0229230 | Msa0518450 | 0.839756 | 1.310222e-57 | -8.615850e-47 |
| Msa0229230 | Msa0520890 | 0.837793 | 4.214449e-57 | -8.615850e-47 |
| Msa0229230 | Msa0524500 | 0.836850 | 7.348318e-57 | -8.615850e-47 |
| Msa0229230 | Msa0526420 | 0.822429 | 2.380022e-53 | -8.615850e-47 |
| Msa0229230 | Msa0529890 | 0.834200 | 3.438885e-56 | -8.615850e-47 |
| Msa0229230 | Msa0530780 | 0.838724 | 2.426119e-57 | -8.615850e-47 |
| Msa0229230 | Msa0531180 | 0.800821 | 1.204172e-48 | -8.615850e-47 |
| Msa0229230 | Msa0532070 | 0.857995 | 1.116002e-62 | -8.615850e-47 |
| Msa0229230 | Msa0548240 | 0.823151 | 1.616420e-53 | -8.615850e-47 |
| Msa0229230 | Msa0556060 | 0.848480 | 5.968109e-60 | -8.615850e-47 |
| Msa0229230 | Msa0569200 | 0.817208 | 3.714734e-52 | -8.615850e-47 |
| Msa0229230 | Msa0572840 | 0.823285 | 1.503643e-53 | -8.615850e-47 |
| Msa0229230 | Msa0581110 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0229230 | Msa0585560 | 0.835471 | 1.646223e-56 | -8.615850e-47 |
| Msa0229230 | Msa0588360 | 0.825971 | 3.504165e-54 | -8.615850e-47 |
| Msa0229230 | Msa0607050 | 0.813773 | 2.159558e-51 | -8.615850e-47 |
| Msa0229230 | Msa0608320 | 0.848848 | 4.719630e-60 | -8.615850e-47 |
| Msa0229230 | Msa0615710 | 0.924895 | 3.819082e-90 | -8.615850e-47 |
| Msa0229230 | Msa0625720 | 0.832805 | 7.667053e-56 | -8.615850e-47 |
| Msa0229230 | Msa0631170 | 0.821630 | 3.645508e-53 | -8.615850e-47 |
| Msa0229230 | Msa0635550 | 0.803291 | 3.739318e-49 | -8.615850e-47 |
| Msa0229230 | Msa0658880 | 0.809940 | 1.475972e-50 | -8.615850e-47 |
| Msa0229230 | Msa0662500 | 0.803778 | 2.964033e-49 | -8.615850e-47 |
| Msa0229230 | Msa0663390 | 0.841206 | 5.467523e-58 | -8.615850e-47 |
| Msa0229230 | Msa0689230 | 0.840258 | 9.688314e-58 | -8.615850e-47 |
| Msa0229230 | Msa0689260 | 0.818906 | 1.534993e-52 | -8.615850e-47 |
| Msa0229230 | Msa0690150 | 0.813405 | 2.603172e-51 | -8.615850e-47 |
| Msa0229230 | Msa0690860 | 0.818316 | 2.089162e-52 | -8.615850e-47 |
| Msa0229230 | Msa0692040 | -0.818980 | 1.476971e-52 | -8.615850e-47 |
| Msa0229230 | Msa0693370 | 0.844094 | 9.350299e-59 | -8.615850e-47 |
| Msa0229230 | Msa0698830 | 0.888869 | 4.024478e-73 | -8.615850e-47 |
| Msa0229230 | Msa0704410 | 0.829418 | 5.205874e-55 | -8.615850e-47 |
| Msa0229230 | Msa0709400 | 0.839963 | 1.156683e-57 | -8.615850e-47 |
| Msa0229230 | Msa0711780 | 0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0229230 | Msa0715700 | 0.821822 | 3.290927e-53 | -8.615850e-47 |
| Msa0229230 | Msa0716690 | 0.827000 | 1.992039e-54 | -8.615850e-47 |
| Msa0229230 | Msa0716830 | 0.805576 | 1.248582e-49 | -8.615850e-47 |
| Msa0229230 | Msa0727550 | 0.825745 | 3.963745e-54 | -8.615850e-47 |
| Msa0229230 | Msa0730430 | 0.819507 | 1.120290e-52 | -8.615850e-47 |
| Msa0229230 | Msa0741240 | 0.808187 | 3.502933e-50 | -8.615850e-47 |
| Msa0229230 | Msa0745700 | -0.815317 | 9.835437e-52 | -8.615850e-47 |
| Msa0229230 | Msa0749320 | 0.805964 | 1.034992e-49 | -8.615850e-47 |
| Msa0229230 | Msa0756490 | 0.827635 | 1.402718e-54 | -8.615850e-47 |
| Msa0229230 | Msa0757830 | 0.837676 | 4.516962e-57 | -8.615850e-47 |
| Msa0229230 | Msa0765080 | 0.856351 | 3.411086e-62 | -8.615850e-47 |
| Msa0229230 | Msa0765910 | 0.845447 | 4.037736e-59 | -8.615850e-47 |
| Msa0229230 | Msa0770720 | 0.816338 | 5.821715e-52 | -8.615850e-47 |
| Msa0229230 | Msa0784200 | 0.825347 | 4.925945e-54 | -8.615850e-47 |
| Msa0229230 | Msa0788850 | 0.813568 | 2.396079e-51 | -8.615850e-47 |
| Msa0229230 | Msa0793800 | 0.811159 | 8.050163e-51 | -8.615850e-47 |
| Msa0229230 | Msa0806790 | 0.843113 | 1.710506e-58 | -8.615850e-47 |
| Msa0229230 | Msa0806800 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa0229230 | Msa0813530 | 0.814484 | 1.505041e-51 | -8.615850e-47 |
| Msa0229230 | Msa0818310 | 0.828564 | 8.381885e-55 | -8.615850e-47 |
| Msa0229230 | Msa0820650 | 0.809612 | 1.736464e-50 | -8.615850e-47 |
| Msa0229230 | Msa0829300 | 0.805406 | 1.355433e-49 | -8.615850e-47 |
| Msa0229230 | Msa0829330 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0229230 | Msa0835490 | 0.802894 | 4.517317e-49 | -8.615850e-47 |
| Msa0229230 | Msa0845440 | 0.816329 | 5.849529e-52 | -8.615850e-47 |
| Msa0229230 | Msa0847770 | 0.807937 | 3.959581e-50 | -8.615850e-47 |
| Msa0229230 | Msa0858770 | 0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0229230 | Msa0861870 | 0.812990 | 3.210760e-51 | -8.615850e-47 |
| Msa0229230 | Msa0867220 | 0.804173 | 2.453485e-49 | -8.615850e-47 |
| Msa0229230 | Msa0880020 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
| Msa0229230 | Msa0880780 | 0.830121 | 3.510392e-55 | -8.615850e-47 |
| Msa0229230 | Msa0881460 | 0.800171 | 1.633505e-48 | -8.615850e-47 |
| Msa0229230 | Msa0884410 | -0.819570 | 1.083492e-52 | -8.615850e-47 |
| Msa0229230 | Msa0891710 | 0.829386 | 5.300137e-55 | -8.615850e-47 |
| Msa0229230 | Msa0892120 | 0.817874 | 2.629361e-52 | -8.615850e-47 |
| Msa0229230 | Msa0902760 | 0.827072 | 1.914145e-54 | -8.615850e-47 |
| Msa0229230 | Msa0919770 | 0.838804 | 2.312617e-57 | -8.615850e-47 |
| Msa0229230 | Msa0924470 | 0.800485 | 1.409599e-48 | -8.615850e-47 |
| Msa0229230 | Msa0944680 | 0.832434 | 9.472923e-56 | -8.615850e-47 |
| Msa0229230 | Msa0945110 | 0.871757 | 5.357768e-67 | -8.615850e-47 |
| Msa0229230 | Msa0960600 | 0.820739 | 5.848927e-53 | -8.615850e-47 |
| Msa0229230 | Msa0963270 | 0.827099 | 1.885711e-54 | -8.615850e-47 |
| Msa0229230 | Msa0966400 | 0.853823 | 1.851707e-61 | -8.615850e-47 |
| Msa0229230 | Msa0967870 | 0.809479 | 1.854112e-50 | -8.615850e-47 |
| Msa0229230 | Msa0968590 | 0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0229230 | Msa0979730 | 0.818710 | 1.700595e-52 | -8.615850e-47 |
| Msa0229230 | Msa0981810 | 0.842341 | 2.743382e-58 | -8.615850e-47 |
| Msa0229230 | Msa1004550 | 0.813464 | 2.525569e-51 | -8.615850e-47 |
| Msa0229230 | Msa1004600 | 0.804080 | 2.564306e-49 | -8.615850e-47 |
| Msa0229230 | Msa1013400 | 0.831142 | 1.974330e-55 | -8.615850e-47 |
| Msa0229230 | Msa1019430 | 0.821558 | 3.787213e-53 | -8.615850e-47 |
| Msa0229230 | Msa1019470 | 0.815831 | 7.557464e-52 | -8.615850e-47 |
| Msa0229230 | Msa1020670 | 0.829301 | 5.557591e-55 | -8.615850e-47 |
| Msa0229230 | Msa1021470 | 0.812405 | 4.310969e-51 | -8.615850e-47 |
| Msa0229230 | Msa1031660 | 0.814390 | 1.578691e-51 | -8.615850e-47 |
| Msa0229230 | Msa1044680 | 0.816784 | 4.626516e-52 | -8.615850e-47 |
| Msa0229230 | Msa1045140 | 0.815060 | 1.121632e-51 | -8.615850e-47 |
| Msa0229230 | Msa1048160 | 0.805396 | 1.362040e-49 | -8.615850e-47 |
| Msa0229230 | Msa1051830 | 0.801182 | 1.015945e-48 | -8.615850e-47 |
| Msa0229230 | Msa1060230 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
| Msa0229230 | Msa1070720 | 0.811588 | 6.495525e-51 | -8.615850e-47 |
| Msa0229230 | Msa1074370 | 0.825477 | 4.589280e-54 | -8.615850e-47 |
| Msa0229230 | Msa1077570 | 0.823400 | 1.413562e-53 | -8.615850e-47 |
| Msa0229230 | Msa1078170 | 0.828315 | 9.624126e-55 | -8.615850e-47 |
| Msa0229230 | Msa1081930 | 0.848097 | 7.614950e-60 | -8.615850e-47 |
| Msa0229230 | Msa1083610 | 0.836593 | 8.544696e-57 | -8.615850e-47 |
| Msa0229230 | Msa1084960 | 0.837088 | 6.388433e-57 | -8.615850e-47 |
| Msa0229230 | Msa1093530 | 0.831109 | 2.011238e-55 | -8.615850e-47 |
| Msa0229230 | Msa1096970 | 0.820605 | 6.280364e-53 | -8.615850e-47 |
| Msa0229230 | Msa1100050 | 0.827779 | 1.295417e-54 | -8.615850e-47 |
| Msa0229230 | Msa1102220 | 0.830179 | 3.398133e-55 | -8.615850e-47 |
| Msa0229230 | Msa1103990 | 0.844621 | 6.749899e-59 | -8.615850e-47 |
| Msa0229230 | Msa1105460 | 0.832093 | 1.150681e-55 | -8.615850e-47 |
| Msa0229230 | Msa1105640 | 0.802373 | 5.785096e-49 | -8.615850e-47 |
| Msa0229230 | Msa1106700 | 0.826371 | 2.813921e-54 | -8.615850e-47 |
| Msa0229230 | Msa1111090 | 0.819565 | 1.086364e-52 | -8.615850e-47 |
| Msa0229230 | Msa1123380 | 0.815787 | 7.729329e-52 | -8.615850e-47 |
| Msa0229230 | Msa1124960 | 0.825010 | 5.918172e-54 | -8.615850e-47 |
| Msa0229230 | Msa1128600 | 0.876486 | 1.343700e-68 | -8.615850e-47 |
| Msa0229230 | Msa1130980 | 0.802434 | 5.621682e-49 | -8.615850e-47 |
| Msa0229230 | Msa1135470 | 0.824143 | 9.467346e-54 | -8.615850e-47 |
| Msa0229230 | Msa1140210 | 0.802162 | 6.395697e-49 | -8.615850e-47 |
| Msa0229230 | Msa1142020 | 0.800544 | 1.371090e-48 | -8.615850e-47 |
| Msa0229230 | Msa1148910 | 0.878052 | 3.836102e-69 | -8.615850e-47 |
| Msa0229230 | Msa1155170 | -0.804469 | 2.127942e-49 | -8.615850e-47 |
| Msa0229230 | Msa1157760 | -0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0229230 | Msa1158570 | 0.838473 | 2.815877e-57 | -8.615850e-47 |
| Msa0229230 | Msa1165940 | 0.865325 | 6.409197e-65 | -8.615850e-47 |
| Msa0229230 | Msa1167340 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
| Msa0229230 | Msa1174780 | 0.824391 | 8.277867e-54 | -8.615850e-47 |
| Msa0229230 | Msa1189070 | 0.827385 | 1.611001e-54 | -8.615850e-47 |
| Msa0229230 | Msa1190920 | 0.825485 | 4.569859e-54 | -8.615850e-47 |
| Msa0229230 | Msa1206460 | 0.805211 | 1.489274e-49 | -8.615850e-47 |
| Msa0229230 | Msa1209460 | 0.826926 | 2.074286e-54 | -8.615850e-47 |
| Msa0229230 | Msa1211230 | -0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0229230 | Msa1218550 | 0.835191 | 1.936642e-56 | -8.615850e-47 |
| Msa0229230 | Msa1218600 | 0.808495 | 3.012222e-50 | -8.615850e-47 |
| Msa0229230 | Msa1224930 | 0.800631 | 1.316488e-48 | -8.615850e-47 |
| Msa0229230 | Msa1225700 | 0.883032 | 6.323609e-71 | -8.615850e-47 |
| Msa0229230 | Msa1229320 | 0.826794 | 2.230389e-54 | -8.615850e-47 |
| Msa0229230 | Msa1229500 | 0.814789 | 1.288278e-51 | -8.615850e-47 |
| Msa0229230 | Msa1239410 | 0.812629 | 3.850240e-51 | -8.615850e-47 |
| Msa0229230 | Msa1244600 | 0.828862 | 7.100440e-55 | -8.615850e-47 |
| Msa0229230 | Msa1251160 | 0.806886 | 6.614422e-50 | -8.615850e-47 |
| Msa0229230 | Msa1253020 | 0.804631 | 1.969282e-49 | -8.615850e-47 |
| Msa0229230 | Msa1254730 | 0.808815 | 2.572503e-50 | -8.615850e-47 |
| Msa0229230 | Msa1271990 | 0.806628 | 7.500729e-50 | -8.615850e-47 |
| Msa0229230 | Msa1276830 | 0.844847 | 5.864608e-59 | -8.615850e-47 |
| Msa0229230 | Msa1279400 | 0.811310 | 7.462540e-51 | -8.615850e-47 |
| Msa0229230 | Msa1282260 | 0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa0229230 | Msa1284550 | 0.818658 | 1.747862e-52 | -8.615850e-47 |
| Msa0229230 | Msa1294820 | 0.822259 | 2.606811e-53 | -8.615850e-47 |
| Msa0229230 | Msa1298220 | 0.807017 | 6.206345e-50 | -8.615850e-47 |
| Msa0229230 | Msa1321340 | 0.830369 | 3.053407e-55 | -8.615850e-47 |
| Msa0229230 | Msa1322940 | 0.820145 | 8.007039e-53 | -8.615850e-47 |
| Msa0229230 | Msa1328710 | 0.804534 | 2.063319e-49 | -8.615850e-47 |
| Msa0229230 | Msa1330410 | 0.815912 | 7.249971e-52 | -8.615850e-47 |
| Msa0229230 | Msa1358220 | 0.833138 | 6.334410e-56 | -8.615850e-47 |
| Msa0229230 | Msa1358250 | 0.817434 | 3.305146e-52 | -8.615850e-47 |
| Msa0229230 | Msa1360440 | 0.815608 | 8.472939e-52 | -8.615850e-47 |
| Msa0229230 | Msa1362150 | -0.807244 | 5.556945e-50 | -8.615850e-47 |
| Msa0229230 | Msa1366800 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0229230 | Msa1367590 | 0.804253 | 2.360985e-49 | -8.615850e-47 |
| Msa0229230 | Msa1370070 | -0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0229230 | Msa1372230 | 0.811323 | 7.415523e-51 | -8.615850e-47 |
| Msa0229230 | Msa1374550 | 0.805854 | 1.091906e-49 | -8.615850e-47 |
| Msa0229230 | Msa1381350 | 0.813628 | 2.324675e-51 | -8.615850e-47 |
| Msa0229230 | Msa1382560 | 0.819711 | 1.006177e-52 | -8.615850e-47 |
| Msa0229230 | Msa1382620 | 0.806375 | 8.481847e-50 | -8.615850e-47 |
| Msa0229230 | Msa1386780 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0229230 | Msa1390440 | 0.816127 | 6.490951e-52 | -8.615850e-47 |
| Msa0229230 | Msa1391770 | 0.853043 | 3.101681e-61 | -8.615850e-47 |
| Msa0229230 | Msa1392240 | 0.803529 | 3.337214e-49 | -8.615850e-47 |
| Msa0229230 | Msa1392780 | 0.808075 | 3.700199e-50 | -8.615850e-47 |
| Msa0229230 | Msa1393890 | 0.801938 | 7.109475e-49 | -8.615850e-47 |
| Msa0229230 | Msa1413690 | 0.836478 | 9.138649e-57 | -8.615850e-47 |
| Msa0229230 | Msa1417420 | 0.803706 | 3.067083e-49 | -8.615850e-47 |
| Msa0229230 | Msa1432420 | 0.814608 | 1.412666e-51 | -8.615850e-47 |
| Msa0229230 | Msa1433390 | 0.823211 | 1.564747e-53 | -8.615850e-47 |
| Msa0229230 | Msa1436570 | 0.834824 | 2.397159e-56 | -8.615850e-47 |
| Msa0229230 | Msa1440880 | 0.806748 | 7.074900e-50 | -8.615850e-47 |
| Msa0229230 | Msa1446810 | 0.825381 | 4.835980e-54 | -8.615850e-47 |
| Msa0229230 | Msa1446820 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa0229230 | Msa1451160 | 0.844517 | 7.197267e-59 | -8.615850e-47 |
| Msa0229230 | Msa1457910 | 0.805718 | 1.165731e-49 | -8.615850e-47 |
| Msa0229230 | Msa1459270 | 0.816626 | 5.020074e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229230 | MtrunA17_Chr4g0052291 | 99.764 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 0.0 | 880 |
| Msa0229230 | MtrunA17_Chr4g0036951 | 53.165 | 395 | 168 | 5 | 21 | 414 | 17 | 395 | 6.29e-142 | 410 |
| Msa0229230 | MtrunA17_Chr2g0299271 | 31.651 | 436 | 248 | 12 | 17 | 415 | 58 | 480 | 1.14e-61 | 207 |
| Msa0229230 | MtrunA17_Chr2g0330271 | 29.148 | 446 | 256 | 12 | 17 | 415 | 17 | 449 | 3.77e-50 | 176 |
| Msa0229230 | MtrunA17_Chr8g0377441 | 29.825 | 285 | 158 | 7 | 119 | 373 | 156 | 428 | 1.06e-30 | 123 |
| Msa0229230 | MtrunA17_Chr5g0406931 | 28.746 | 327 | 177 | 14 | 118 | 408 | 142 | 448 | 7.45e-25 | 105 |
| Msa0229230 | MtrunA17_Chr2g0283891 | 23.411 | 299 | 187 | 6 | 105 | 403 | 54 | 310 | 9.20e-19 | 86.7 |
| Msa0229230 | MtrunA17_Chr2g0283891 | 24.571 | 175 | 117 | 2 | 230 | 404 | 64 | 223 | 1.48e-11 | 65.1 |
| Msa0229230 | MtrunA17_Chr5g0401671 | 26.840 | 231 | 132 | 10 | 182 | 404 | 351 | 552 | 6.70e-15 | 76.6 |
| Msa0229230 | MtrunA17_Chr4g0053651 | 26.556 | 241 | 140 | 10 | 174 | 406 | 326 | 537 | 9.35e-15 | 76.3 |
| Msa0229230 | MtrunA17_Chr5g0401661 | 26.778 | 239 | 138 | 10 | 174 | 404 | 433 | 642 | 9.43e-15 | 76.3 |
| Msa0229230 | MtrunA17_Chr5g0447911 | 27.778 | 180 | 114 | 3 | 177 | 349 | 250 | 420 | 7.28e-13 | 70.1 |
| Msa0229230 | MtrunA17_Chr4g0004241 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 1.02e-12 | 70.1 |
| Msa0229230 | MtrunA17_Chr2g0281451 | 27.885 | 208 | 121 | 9 | 194 | 389 | 73 | 263 | 1.30e-12 | 70.1 |
| Msa0229230 | MtrunA17_Chr2g0281451 | 25.592 | 211 | 129 | 8 | 194 | 404 | 31 | 213 | 6.22e-11 | 64.7 |
| Msa0229230 | MtrunA17_Chr2g0331981 | 24.631 | 203 | 131 | 5 | 194 | 385 | 30 | 221 | 2.01e-12 | 69.3 |
| Msa0229230 | MtrunA17_Chr6g0448921 | 25.000 | 192 | 122 | 7 | 221 | 411 | 10 | 180 | 5.13e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229230 | AT5G58230.1 | 88.942 | 416 | 46 | 0 | 1 | 416 | 1 | 416 | 0.0 | 776 |
| Msa0229230 | AT2G16780.1 | 53.555 | 422 | 164 | 8 | 2 | 414 | 5 | 403 | 3.28e-152 | 437 |
| Msa0229230 | AT4G35050.1 | 52.439 | 410 | 175 | 6 | 6 | 409 | 4 | 399 | 1.43e-147 | 426 |
| Msa0229230 | AT2G19520.1 | 32.353 | 442 | 240 | 13 | 17 | 415 | 64 | 489 | 1.53e-62 | 210 |
| Msa0229230 | AT4G29730.1 | 29.412 | 442 | 251 | 12 | 13 | 415 | 50 | 469 | 1.31e-55 | 191 |
| Msa0229230 | AT4G29730.3 | 29.008 | 393 | 225 | 11 | 13 | 373 | 50 | 420 | 6.79e-45 | 162 |
| Msa0229230 | AT4G29730.2 | 29.008 | 393 | 225 | 11 | 13 | 373 | 50 | 420 | 6.79e-45 | 162 |
| Msa0229230 | AT2G19540.1 | 29.375 | 320 | 187 | 9 | 119 | 408 | 153 | 463 | 6.87e-31 | 124 |
| Msa0229230 | AT1G29260.1 | 25.957 | 235 | 152 | 4 | 169 | 403 | 97 | 309 | 3.98e-17 | 82.4 |
| Msa0229230 | AT1G29260.1 | 28.000 | 175 | 111 | 2 | 230 | 404 | 63 | 222 | 6.30e-14 | 72.8 |
| Msa0229230 | AT1G52360.4 | 25.616 | 203 | 129 | 5 | 194 | 385 | 30 | 221 | 8.67e-13 | 70.9 |
| Msa0229230 | AT1G52360.1 | 25.616 | 203 | 129 | 5 | 194 | 385 | 30 | 221 | 8.67e-13 | 70.9 |
| Msa0229230 | AT1G52360.3 | 25.616 | 203 | 129 | 5 | 194 | 385 | 30 | 221 | 9.63e-13 | 70.9 |
| Msa0229230 | AT2G32950.2 | 25.941 | 239 | 157 | 8 | 114 | 347 | 241 | 464 | 1.20e-12 | 70.1 |
| Msa0229230 | AT1G11160.3 | 28.431 | 204 | 125 | 9 | 194 | 389 | 31 | 221 | 1.23e-12 | 70.5 |
| Msa0229230 | AT1G52360.2 | 25.616 | 203 | 129 | 5 | 194 | 385 | 74 | 265 | 1.35e-12 | 70.5 |
| Msa0229230 | AT2G32950.1 | 25.941 | 239 | 157 | 8 | 114 | 347 | 354 | 577 | 1.46e-12 | 70.1 |
| Msa0229230 | AT1G11160.1 | 26.000 | 250 | 134 | 8 | 184 | 389 | 21 | 263 | 1.61e-12 | 70.1 |
| Msa0229230 | AT3G63460.3 | 26.923 | 182 | 117 | 6 | 174 | 346 | 118 | 292 | 1.67e-12 | 70.1 |
| Msa0229230 | AT3G63460.2 | 26.923 | 182 | 117 | 6 | 174 | 346 | 118 | 292 | 1.72e-12 | 70.1 |
| Msa0229230 | AT3G63460.1 | 26.923 | 182 | 117 | 6 | 174 | 346 | 118 | 292 | 1.78e-12 | 70.1 |
| Msa0229230 | AT1G11160.4 | 26.000 | 250 | 134 | 8 | 184 | 389 | 21 | 263 | 2.02e-12 | 69.7 |
| Msa0229230 | AT1G11160.2 | 26.000 | 250 | 134 | 8 | 184 | 389 | 21 | 263 | 2.04e-12 | 69.7 |
| Msa0229230 | AT3G49660.1 | 29.224 | 219 | 138 | 9 | 163 | 372 | 6 | 216 | 4.01e-12 | 67.4 |
| Msa0229230 | AT5G23430.3 | 25.543 | 184 | 116 | 6 | 221 | 404 | 10 | 172 | 4.78e-12 | 68.6 |
| Msa0229230 | AT5G23430.2 | 25.543 | 184 | 116 | 6 | 221 | 404 | 10 | 172 | 4.78e-12 | 68.6 |
| Msa0229230 | AT5G08390.1 | 25.000 | 192 | 122 | 7 | 221 | 411 | 10 | 180 | 4.83e-12 | 68.6 |
| Msa0229230 | AT5G23430.1 | 25.543 | 184 | 116 | 6 | 221 | 404 | 10 | 172 | 4.87e-12 | 68.6 |
| Msa0229230 | AT3G15980.7 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.17e-12 | 68.6 |
| Msa0229230 | AT3G15980.1 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.58e-12 | 68.2 |
| Msa0229230 | AT3G15980.3 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.70e-12 | 68.2 |
| Msa0229230 | AT3G15980.6 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.70e-12 | 68.2 |
| Msa0229230 | AT3G15980.2 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.70e-12 | 68.2 |
| Msa0229230 | AT3G15980.4 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.70e-12 | 68.2 |
| Msa0229230 | AT3G15980.5 | 25.123 | 203 | 130 | 5 | 194 | 385 | 30 | 221 | 5.88e-12 | 68.2 |
| Msa0229230 | AT5G13480.2 | 24.286 | 280 | 165 | 12 | 127 | 402 | 136 | 372 | 3.59e-11 | 65.5 |
| Msa0229230 | AT5G13480.3 | 24.286 | 280 | 165 | 12 | 127 | 402 | 113 | 349 | 3.60e-11 | 65.5 |
| Msa0229230 | AT5G13480.1 | 24.286 | 280 | 165 | 12 | 127 | 402 | 125 | 361 | 3.62e-11 | 65.5 |
| Msa0229230 | AT5G13480.4 | 24.286 | 280 | 165 | 12 | 127 | 402 | 113 | 349 | 3.78e-11 | 65.5 |
| Msa0229230 | AT1G79990.1 | 24.631 | 203 | 131 | 5 | 194 | 385 | 30 | 221 | 4.51e-11 | 65.5 |
| Msa0229230 | AT1G79990.2 | 24.631 | 203 | 131 | 5 | 194 | 385 | 30 | 221 | 4.86e-11 | 65.5 |
| Msa0229230 | AT2G43770.1 | 26.160 | 237 | 143 | 10 | 170 | 404 | 45 | 251 | 5.48e-11 | 63.9 |
Find 120 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAGACAGTTTCATTCTT+TGG | 0.185089 | 2_2:+843637 | None:intergenic |
| AACTGAGTTCAATTACATTA+AGG | 0.220917 | 2_2:+842593 | None:intergenic |
| TTGAGCGAGCATGAGGTAAT+TGG | 0.234646 | 2_2:+846221 | None:intergenic |
| ATTCAGCCACATCGGTTAAA+AGG | 0.238214 | 2_2:+842334 | None:intergenic |
| ATTTGTTTGTGGGATATTAA+TGG | 0.257426 | 2_2:-845844 | Msa0229230:CDS |
| AGGTTGAATGTTTGGGTCTA+AGG | 0.261250 | 2_2:-842557 | Msa0229230:three_prime_UTR |
| ACATCACATTTGAGAGAGTT+AGG | 0.277178 | 2_2:-846486 | Msa0229230:five_prime_UTR |
| CCAAGACAGTTTCATTCTTT+GGG | 0.298461 | 2_2:+843638 | None:intergenic |
| CGTCCTGAAGTTGGAGGGTT+TGG | 0.303486 | 2_2:-846144 | Msa0229230:CDS |
| GCATCAAGAGACTTATTCTT+AGG | 0.319433 | 2_2:+845817 | None:intergenic |
| ATGATCAGTATTTGCTTGTA+TGG | 0.322224 | 2_2:-845618 | Msa0229230:CDS |
| CCATCAATTGGAGGCTTAGA+AGG | 0.322579 | 2_2:+845976 | None:intergenic |
| GGGGCCTGTGCTGACTGTTC+TGG | 0.324266 | 2_2:+842614 | None:intergenic |
| CTTTCAATCCCTTCAATGAA+TGG | 0.340735 | 2_2:-843867 | Msa0229230:CDS |
| CCTTCTAAGCCTCCAATTGA+TGG | 0.346065 | 2_2:-845976 | Msa0229230:CDS |
| TTGAGGCATGAGTATTTGTT+TGG | 0.347301 | 2_2:-845652 | Msa0229230:CDS |
| TGTCCTCTTAACCTCAAATC+AGG | 0.355268 | 2_2:+845943 | None:intergenic |
| TTGTTATGCGTCGAGTCATT+AGG | 0.355516 | 2_2:-842404 | Msa0229230:three_prime_UTR |
| AAGACAACATACTTCAAATA+TGG | 0.358936 | 2_2:-842676 | Msa0229230:CDS |
| ATTGTAGTTGTATTTCAATA+TGG | 0.359917 | 2_2:-842492 | Msa0229230:three_prime_UTR |
| CATGGAACCCATGTGAAGAT+TGG | 0.363420 | 2_2:-842718 | Msa0229230:CDS |
| ACTGAGTTCAATTACATTAA+GGG | 0.365910 | 2_2:+842594 | None:intergenic |
| TGAAATATAGGTTGAATGTT+TGG | 0.371631 | 2_2:-842565 | Msa0229230:three_prime_UTR |
| TCAACGAAGAATACAAAATC+TGG | 0.373066 | 2_2:-846401 | Msa0229230:CDS |
| CATCTTCCACAACACCTTCA+TGG | 0.374230 | 2_2:+845686 | None:intergenic |
| CTCAGTTTAGTGTGAAATAT+AGG | 0.376554 | 2_2:-842577 | Msa0229230:three_prime_UTR |
| AGTATTTGTTTGGTTCTGTT+GGG | 0.383674 | 2_2:-845642 | Msa0229230:CDS |
| GTCTTGGCTTCTTGTTGTCT+TGG | 0.391546 | 2_2:-843622 | Msa0229230:CDS |
| TGGCTTCTTGTTGTCTTGGT+AGG | 0.395080 | 2_2:-843618 | Msa0229230:CDS |
| CAACCAAACCCTCCAACTTC+AGG | 0.396221 | 2_2:+846141 | None:intergenic |
| AAACAAGGACATTTGCTTAG+TGG | 0.397496 | 2_2:-845883 | Msa0229230:CDS |
| GGACATAATACTGAAGGTTA+TGG | 0.401530 | 2_2:-845925 | Msa0229230:CDS |
| CCGGCGGGTTCAGTGCGATC+TGG | 0.403346 | 2_2:+846300 | None:intergenic |
| AACCCTGATTTGAGGTTAAG+AGG | 0.408019 | 2_2:-845946 | Msa0229230:CDS |
| CTGAAGGTTATGGTTTGTCT+TGG | 0.425247 | 2_2:-845915 | Msa0229230:CDS |
| GGGTTACAACTTCCATCAAT+TGG | 0.425575 | 2_2:+845964 | None:intergenic |
| GAGTATTTGTTTGGTTCTGT+TGG | 0.442494 | 2_2:-845643 | Msa0229230:CDS |
| GGAGGGTTTGGTTGTGCGAA+TGG | 0.452217 | 2_2:-846132 | Msa0229230:CDS |
| TGAGCGAGCATGAGGTAATT+GGG | 0.457887 | 2_2:+846222 | None:intergenic |
| GGGAAGAAGTGAGAAAGTAG+TGG | 0.463421 | 2_2:-846566 | None:intergenic |
| TTGTGGGATCTGCGCAAGAT+TGG | 0.469154 | 2_2:-843808 | Msa0229230:CDS |
| TGAGCAATGCAAGACTGAAC+AGG | 0.469797 | 2_2:+845568 | None:intergenic |
| TCTTTGGGTTCCAGCCAACC+TGG | 0.471969 | 2_2:+843653 | None:intergenic |
| GGACCATCTTCAGCATCCTC+TGG | 0.473998 | 2_2:+842794 | None:intergenic |
| GAAAGTAGTGGGATAGAGAA+GGG | 0.474793 | 2_2:-846554 | Msa0229230:five_prime_UTR |
| GAAATATAGGTTGAATGTTT+GGG | 0.476064 | 2_2:-842564 | Msa0229230:three_prime_UTR |
| TGATGCTCAGATTTGTTTGT+GGG | 0.482057 | 2_2:-845854 | Msa0229230:CDS |
| CATCACATTTGAGAGAGTTA+GGG | 0.484531 | 2_2:-846485 | Msa0229230:five_prime_UTR |
| GAGGGTTTGGTTGTGCGAAT+GGG | 0.487731 | 2_2:-846131 | Msa0229230:CDS |
| CGGACAAAACAGTGAAATTG+TGG | 0.487959 | 2_2:-843825 | Msa0229230:CDS |
| CCCAAAGAATGAAACTGTCT+TGG | 0.489287 | 2_2:-843638 | Msa0229230:CDS |
| GCAAAATATCCGACTTCTCA+TGG | 0.491026 | 2_2:-842736 | Msa0229230:CDS |
| TTCAGCCACATCGGTTAAAA+GGG | 0.497542 | 2_2:+842335 | None:intergenic |
| GATGACGATCGTCCTGAAGT+TGG | 0.499636 | 2_2:-846153 | Msa0229230:CDS |
| AAGATGTGGCTTGGCATTTG+AGG | 0.499952 | 2_2:-845669 | Msa0229230:CDS |
| TTGTATTTCAATATGGTATG+AGG | 0.502486 | 2_2:-842485 | Msa0229230:three_prime_UTR |
| AGCAACTATCCATTCATTGA+AGG | 0.510302 | 2_2:+843858 | None:intergenic |
| GGCAAAATGCTTTCATGCAC+GGG | 0.511550 | 2_2:+842287 | None:intergenic |
| ATGATGCTCAGATTTGTTTG+TGG | 0.513746 | 2_2:-845855 | Msa0229230:CDS |
| AATGAATGGATAGTTGCTAC+TGG | 0.517233 | 2_2:-843853 | Msa0229230:CDS |
| TGATGGTGTGGGATCTTAGC+AGG | 0.518950 | 2_2:-843591 | Msa0229230:intron |
| TGATCAGTATTTGCTTGTAT+GGG | 0.519134 | 2_2:-845617 | Msa0229230:CDS |
| AAGTAGTGGGATAGAGAAGG+GGG | 0.520985 | 2_2:-846552 | Msa0229230:five_prime_UTR |
| ACAACTACAATTGCGTAGAA+AGG | 0.522646 | 2_2:+842504 | None:intergenic |
| ATGGAACCCATGTGAAGATT+GGG | 0.525962 | 2_2:-842717 | Msa0229230:CDS |
| TTACAACTTCCATCAATTGG+AGG | 0.527832 | 2_2:+845967 | None:intergenic |
| GATAGTTGCTACTGGTTCTA+CGG | 0.527969 | 2_2:-843845 | Msa0229230:CDS |
| TTTCAATATGGTATGAGGTA+TGG | 0.529152 | 2_2:-842480 | Msa0229230:three_prime_UTR |
| AGAAAGTAGTGGGATAGAGA+AGG | 0.529651 | 2_2:-846555 | Msa0229230:five_prime_UTR |
| TTGTCTTGGTAGGAGACTGA+TGG | 0.532965 | 2_2:-843608 | Msa0229230:CDS |
| GGAAGAAGTGAGAAAGTAGT+GGG | 0.534065 | 2_2:-846565 | None:intergenic |
| TCATCACTCACGCTCTCGAA+TGG | 0.541702 | 2_2:-846347 | Msa0229230:CDS |
| CTGAGTTCAATTACATTAAG+GGG | 0.543271 | 2_2:+842595 | None:intergenic |
| GCAACTATCCATTCATTGAA+GGG | 0.546007 | 2_2:+843859 | None:intergenic |
| AGGCAAAATGCTTTCATGCA+CGG | 0.546627 | 2_2:+842286 | None:intergenic |
| AAAGTAGTGGGATAGAGAAG+GGG | 0.546879 | 2_2:-846553 | Msa0229230:five_prime_UTR |
| TCACCAGAGGATGCTGAAGA+TGG | 0.548104 | 2_2:-842797 | Msa0229230:CDS |
| GGACAAAACAGTGAAATTGT+GGG | 0.548577 | 2_2:-843824 | Msa0229230:CDS |
| GGCCATCTCTCACCGTCGAA+TGG | 0.548676 | 2_2:-846326 | Msa0229230:CDS |
| TCGATTGTTTAGGTCCATGA+AGG | 0.552925 | 2_2:-845700 | Msa0229230:intron |
| TACTAAGACGGTTAGTGCTG+AGG | 0.555717 | 2_2:-846025 | Msa0229230:CDS |
| AGATTGGGTTGTTGCTAGTG+TGG | 0.562356 | 2_2:-842702 | Msa0229230:CDS |
| ATTCAACAGATTAATCATGA+TGG | 0.562715 | 2_2:-846096 | Msa0229230:CDS |
| GTTTGGTTGTGCGAATGGGA+AGG | 0.569019 | 2_2:-846127 | Msa0229230:CDS |
| GACGATCGTCCTGAAGTTGG+AGG | 0.569228 | 2_2:-846150 | Msa0229230:CDS |
| GTATTTGTTTGGTTCTGTTG+GGG | 0.571264 | 2_2:-845641 | Msa0229230:CDS |
| AGTAACAGCACGAATACAGA+TGG | 0.573291 | 2_2:+842527 | None:intergenic |
| GTCCTCTTAACCTCAAATCA+GGG | 0.573483 | 2_2:+845944 | None:intergenic |
| GAAGTTGTAACCCTGATTTG+AGG | 0.574752 | 2_2:-845954 | Msa0229230:CDS |
| AGCCATTCGACGGTGAGAGA+TGG | 0.578728 | 2_2:+846324 | None:intergenic |
| TTGGTAGGAGACTGATGGTG+TGG | 0.580867 | 2_2:-843603 | Msa0229230:CDS |
| CTGGCATATCATCTTCGTCA+TGG | 0.595465 | 2_2:+842633 | None:intergenic |
| TTTCGGAAGTGTGGGTCCCG+AGG | 0.597109 | 2_2:+846250 | None:intergenic |
| TCTTGGAGTAAGTTTAAACA+AGG | 0.601573 | 2_2:-845898 | Msa0229230:CDS |
| CCAGATCGCACTGAACCCGC+CGG | 0.601917 | 2_2:-846300 | Msa0229230:CDS |
| TTAGGTCCATGAAGGTGTTG+TGG | 0.608540 | 2_2:-845692 | Msa0229230:intron |
| TGGTAGGAGACTGATGGTGT+GGG | 0.611927 | 2_2:-843602 | Msa0229230:CDS |
| GATGACGAGATCGTAGAGGA+AGG | 0.612226 | 2_2:+846365 | None:intergenic |
| ATGTTACTTATGGCAATCAA+AGG | 0.614738 | 2_2:+843771 | None:intergenic |
| ACATGGGTTCCATGAGAAGT+CGG | 0.616608 | 2_2:+842727 | None:intergenic |
| ACAGATTAATCATGATGGTG+AGG | 0.616848 | 2_2:-846091 | Msa0229230:CDS |
| GCAACAACCCAATCTTCACA+TGG | 0.617675 | 2_2:+842710 | None:intergenic |
| CATACTTCAAATATGGCAGA+TGG | 0.618787 | 2_2:-842669 | Msa0229230:CDS |
| ACGATCGTCCTGAAGTTGGA+GGG | 0.619003 | 2_2:-846149 | Msa0229230:CDS |
| CATTGCAGATTCAGCCACAT+CGG | 0.621798 | 2_2:+842326 | None:intergenic |
| TTAAGAGGACATAATACTGA+AGG | 0.624264 | 2_2:-845931 | Msa0229230:CDS |
| GCAATCACAAAACTATTCTG+AGG | 0.629163 | 2_2:+846048 | None:intergenic |
| GTTGAACTTGAGCGAGCATG+AGG | 0.633102 | 2_2:+846214 | None:intergenic |
| ATGACGAGATCGTAGAGGAA+GGG | 0.633340 | 2_2:+846366 | None:intergenic |
| TATGCCAGAACAGTCAGCAC+AGG | 0.635935 | 2_2:-842618 | Msa0229230:CDS |
| GCGATCTGGAAGCCATTCGA+CGG | 0.637412 | 2_2:+846314 | None:intergenic |
| TGAAGGTGTTGTGGAAGATG+TGG | 0.639816 | 2_2:-845683 | Msa0229230:CDS |
| AAAGAAGACGAAGAAATGAG+AGG | 0.647955 | 2_2:-846444 | Msa0229230:CDS |
| GTGTTGTGGAAGATGTGGCT+TGG | 0.652239 | 2_2:-845678 | Msa0229230:CDS |
| TTGCATTGCTCATTCAAGCG+AGG | 0.660555 | 2_2:-845557 | Msa0229230:intron |
| TGAACAGGCTTAGTAACAGA+CGG | 0.667956 | 2_2:+845583 | None:intergenic |
| TGACGAAGAGCAGTCACCAG+AGG | 0.673679 | 2_2:-842810 | Msa0229230:CDS |
| ATGGTGAGGTTAATAGAGCG+AGG | 0.684540 | 2_2:-846077 | Msa0229230:CDS |
| GAGTGATGACGAGATCGTAG+AGG | 0.686206 | 2_2:+846361 | None:intergenic |
| CAACAACCCAATCTTCACAT+GGG | 0.694803 | 2_2:+842711 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATATAGAAAAATCTA+TGG | + | chr2_2:845103-845122 | None:intergenic | 10.0% |
| !! | ATTTGTTTGTATATAATATA+TGG | - | chr2_2:845701-845720 | Msa0229230:intron | 10.0% |
| !! | TTTGTTTGTATATAATATAT+GGG | - | chr2_2:845702-845721 | Msa0229230:intron | 10.0% |
| !!! | TTAATTTTGTTGTTTTTTGT+TGG | - | chr2_2:843090-843109 | Msa0229230:intron | 15.0% |
| !!! | TTTTATCTATGTTTAAATCT+AGG | - | chr2_2:843318-843337 | Msa0229230:intron | 15.0% |
| !!! | TTTTACATTTGGTTTTTTTA+AGG | - | chr2_2:843364-843383 | Msa0229230:intron | 15.0% |
| !!! | TTAATCTAGACAATTATTTT+TGG | - | chr2_2:843466-843485 | Msa0229230:intron | 15.0% |
| !!! | TAGTTTTTTATGCTTTTTAT+AGG | + | chr2_2:844306-844325 | None:intergenic | 15.0% |
| !! | TGATAATTGAAAATTAAACA+TGG | - | chr2_2:844586-844605 | Msa0229230:intron | 15.0% |
| !!! | ATTTTTAAGGTATTCTTGTT+TGG | - | chr2_2:843058-843077 | Msa0229230:intron | 20.0% |
| !!! | TTATAAGCTCTTTTTACATT+TGG | - | chr2_2:843353-843372 | Msa0229230:intron | 20.0% |
| !!! | TAAGGAAGTATAATTAGTTT+AGG | - | chr2_2:843382-843401 | Msa0229230:intron | 20.0% |
| !!! | AAGGAAGTATAATTAGTTTA+GGG | - | chr2_2:843383-843402 | Msa0229230:intron | 20.0% |
| !!! | ATAATAAGCTCTTTTACATT+TGG | - | chr2_2:843693-843712 | Msa0229230:intron | 20.0% |
| !!! | TAATAAGCTCTTTTACATTT+GGG | - | chr2_2:843694-843713 | Msa0229230:intron | 20.0% |
| !!! | CGCTTAATTTATTTTCATAT+TGG | + | chr2_2:844068-844087 | None:intergenic | 20.0% |
| !!! | TAATATCACTATGTTTTGAT+GGG | + | chr2_2:844520-844539 | None:intergenic | 20.0% |
| !!! | TTTTCTTTATATAACGACAT+TGG | - | chr2_2:844932-844951 | Msa0229230:intron | 20.0% |
| !! | TTAAAAAATTGACAATTGAG+AGG | + | chr2_2:845445-845464 | None:intergenic | 20.0% |
| !!! | TTTTAACTTGAAACATTTGA+GGG | + | chr2_2:845884-845903 | None:intergenic | 20.0% |
| !!! | ATTTTAACTTGAAACATTTG+AGG | + | chr2_2:845885-845904 | None:intergenic | 20.0% |
| !! | ATTGTAGTTGTATTTCAATA+TGG | - | chr2_2:846353-846372 | Msa0229230:CDS | 20.0% |
| !!! | TGAACATAATTCTGAAAAAT+TGG | - | chr2_2:846404-846423 | Msa0229230:CDS | 20.0% |
| ! | ATTCAACAGATTAATCATGA+TGG | - | chr2_2:842749-842768 | Msa0229230:CDS | 25.0% |
| ! | ATTTGTTTGTGGGATATTAA+TGG | - | chr2_2:843001-843020 | Msa0229230:intron | 25.0% |
| !!! | TTTTGTTGTTTTTTGTTGGT+TGG | - | chr2_2:843094-843113 | Msa0229230:intron | 25.0% |
| !! | AGTATAATTAGTTTAGGGTT+TGG | - | chr2_2:843388-843407 | Msa0229230:intron | 25.0% |
| ! | ATTATCCAAAATAAACTCCT+AGG | + | chr2_2:843678-843697 | None:intergenic | 25.0% |
| !! | AAGGAAGTATAATTAGTTCA+TGG | - | chr2_2:843722-843741 | Msa0229230:intron | 25.0% |
| ! | AGTATAATTAGTTCATGGTT+TGG | - | chr2_2:843727-843746 | Msa0229230:intron | 25.0% |
| ! | TTAATCTAGACAATTGTTTG+TGG | - | chr2_2:843820-843839 | Msa0229230:CDS | 25.0% |
| ! | TGAAAATAAATTAAGCGTGA+CGG | - | chr2_2:844071-844090 | Msa0229230:intron | 25.0% |
| ! | ACCTATAGTAGAAAAAATAG+TGG | - | chr2_2:844178-844197 | Msa0229230:intron | 25.0% |
| !!! | TCCACTATTTTTTCTACTAT+AGG | + | chr2_2:844182-844201 | None:intergenic | 25.0% |
| !! | TAGAAAAAATAGTGGAAACT+AGG | - | chr2_2:844186-844205 | Msa0229230:intron | 25.0% |
| ! | AAATCTTGAGATTAATGAGT+TGG | - | chr2_2:844334-844353 | Msa0229230:intron | 25.0% |
| !! | TGAGTTGGATAGAAAAATAT+TGG | - | chr2_2:844349-844368 | Msa0229230:intron | 25.0% |
| !!! | CTAATATCACTATGTTTTGA+TGG | + | chr2_2:844521-844540 | None:intergenic | 25.0% |
| !!! | TTGATCTAGATTGTTGTTTT+CGG | - | chr2_2:845149-845168 | Msa0229230:intron | 25.0% |
| ! | AAAACTCAGTAAACATTTCA+GGG | + | chr2_2:845338-845357 | None:intergenic | 25.0% |
| ! | TAAATAATAAACCCAAAAGC+CGG | - | chr2_2:845391-845410 | Msa0229230:intron | 25.0% |
| !!! | TTGTCAATTTTTTAACCTCA+TGG | - | chr2_2:845450-845469 | Msa0229230:intron | 25.0% |
| !!! | TGTCAATTTTTTAACCTCAT+GGG | - | chr2_2:845451-845470 | Msa0229230:intron | 25.0% |
| ! | TGTATATAATATATGGGCTT+CGG | - | chr2_2:845708-845727 | Msa0229230:intron | 25.0% |
| ! | AACAACTAACTTCTAACATT+TGG | + | chr2_2:845780-845799 | None:intergenic | 25.0% |
| ! | AAATGTTAGAAGTTAGTTGT+TGG | - | chr2_2:845779-845798 | Msa0229230:intron | 25.0% |
| !!! | TTTAACTTGAAACATTTGAG+GGG | + | chr2_2:845883-845902 | None:intergenic | 25.0% |
| ! | TCAAGTTAAAATGTCTAAAG+TGG | - | chr2_2:845893-845912 | Msa0229230:CDS | 25.0% |
| !! | CAAGTTAAAATGTCTAAAGT+GGG | - | chr2_2:845894-845913 | Msa0229230:CDS | 25.0% |
| ! | AAGACAACATACTTCAAATA+TGG | - | chr2_2:846169-846188 | Msa0229230:CDS | 25.0% |
| ! | ACTGAGTTCAATTACATTAA+GGG | + | chr2_2:846254-846273 | None:intergenic | 25.0% |
| ! | AACTGAGTTCAATTACATTA+AGG | + | chr2_2:846255-846274 | None:intergenic | 25.0% |
| !! | TGAAATATAGGTTGAATGTT+TGG | - | chr2_2:846280-846299 | Msa0229230:CDS | 25.0% |
| !! | GAAATATAGGTTGAATGTTT+GGG | - | chr2_2:846281-846300 | Msa0229230:CDS | 25.0% |
| ! | TTGTATTTCAATATGGTATG+AGG | - | chr2_2:846360-846379 | Msa0229230:CDS | 25.0% |
| !!! | ATGTGATGTTGTTTTTTCGA+GGG | + | chr2_2:842348-842367 | None:intergenic | 30.0% |
| !!! | AATGTGATGTTGTTTTTTCG+AGG | + | chr2_2:842349-842368 | None:intergenic | 30.0% |
| TCAACGAAGAATACAAAATC+TGG | - | chr2_2:842444-842463 | Msa0229230:three_prime_UTR | 30.0% | |
| ! | TTTTGTGATTGCTACTAAGA+CGG | - | chr2_2:842808-842827 | Msa0229230:CDS | 30.0% |
| TTAAGAGGACATAATACTGA+AGG | - | chr2_2:842914-842933 | Msa0229230:intron | 30.0% | |
| TCTTGGAGTAAGTTTAAACA+AGG | - | chr2_2:842947-842966 | Msa0229230:intron | 30.0% | |
| ! | TGATGCTCATCAGATTTTTA+AGG | - | chr2_2:843045-843064 | Msa0229230:intron | 30.0% |
| ! | GTGTTATTGTTCGATTGTTT+AGG | - | chr2_2:843135-843154 | Msa0229230:intron | 30.0% |
| !! | AGTATTTGTTTGGTTCTGTT+GGG | - | chr2_2:843203-843222 | Msa0229230:intron | 30.0% |
| ATGATCAGTATTTGCTTGTA+TGG | - | chr2_2:843227-843246 | Msa0229230:intron | 30.0% | |
| TGATCAGTATTTGCTTGTAT+GGG | - | chr2_2:843228-843247 | Msa0229230:intron | 30.0% | |
| CGCACTAATTTACACAAAAT+AGG | + | chr2_2:843506-843525 | None:intergenic | 30.0% | |
| ! | ATTTTGTGTAAATTAGTGCG+AGG | - | chr2_2:843506-843525 | Msa0229230:intron | 30.0% |
| ! | TTTTGTGTAAATTAGTGCGA+GGG | - | chr2_2:843507-843526 | Msa0229230:intron | 30.0% |
| ATTTGCATCACATAAAGCAT+CGG | + | chr2_2:843646-843665 | None:intergenic | 30.0% | |
| !! | CTTTTACATTTGGGTTTTCA+AGG | - | chr2_2:843703-843722 | Msa0229230:intron | 30.0% |
| ! | TGAAAGTAGCAACTATTTTG+TGG | - | chr2_2:843845-843864 | Msa0229230:CDS | 30.0% |
| ! | ATTTTGTGGAAATTAGTGTG+AGG | - | chr2_2:843859-843878 | Msa0229230:CDS | 30.0% |
| ! | TTTTGTGGAAATTAGTGTGA+GGG | - | chr2_2:843860-843879 | Msa0229230:CDS | 30.0% |
| ATGTTAAGTGAACAGATACA+GGG | - | chr2_2:843923-843942 | Msa0229230:intron | 30.0% | |
| !! | AGTTGATGGGAAAATTTCAT+TGG | - | chr2_2:844029-844048 | Msa0229230:intron | 30.0% |
| TTGTGTTGAAAGACTTCATT+CGG | - | chr2_2:844557-844576 | Msa0229230:intron | 30.0% | |
| TTGAAAATCTGAGTAAAGAC+AGG | + | chr2_2:844734-844753 | None:intergenic | 30.0% | |
| ! | TAACGACATTGGATTTTGTT+AGG | - | chr2_2:844943-844962 | Msa0229230:intron | 30.0% |
| ! | ATTTTGTTAGGTTAACTGCT+TGG | - | chr2_2:844955-844974 | Msa0229230:intron | 30.0% |
| ! | ATGTTACTTATGGCAATCAA+AGG | + | chr2_2:845077-845096 | None:intergenic | 30.0% |
| ! | TCTATGGAGAATGTTACTTA+TGG | + | chr2_2:845087-845106 | None:intergenic | 30.0% |
| !!! | TGATCTAGATTGTTGTTTTC+GGG | - | chr2_2:845150-845169 | Msa0229230:intron | 30.0% |
| CAAAACTCAGTAAACATTTC+AGG | + | chr2_2:845339-845358 | None:intergenic | 30.0% | |
| ! | CTGAAATGTTTACTGAGTTT+TGG | - | chr2_2:845337-845356 | Msa0229230:intron | 30.0% |
| !! | TTTACTGAGTTTTGGTATGT+TGG | - | chr2_2:845345-845364 | Msa0229230:intron | 30.0% |
| TAAGAGAAACTTTAATCCAG+TGG | + | chr2_2:845422-845441 | None:intergenic | 30.0% | |
| ACTTAATTCGCTAAAAAGAG+TGG | + | chr2_2:845489-845508 | None:intergenic | 30.0% | |
| !! | ACTCTTTTTAGCGAATTAAG+TGG | - | chr2_2:845488-845507 | Msa0229230:intron | 30.0% |
| AGAACCTAATATAACTCAAG+AGG | + | chr2_2:845527-845546 | None:intergenic | 30.0% | |
| TAATGAGACTAATGGAGTAA+TGG | - | chr2_2:845548-845567 | Msa0229230:intron | 30.0% | |
| TTAATATTTACTCCTTCGTC+CGG | - | chr2_2:845803-845822 | Msa0229230:CDS | 30.0% | |
| ! | TTAACTTGAAACATTTGAGG+GGG | + | chr2_2:845882-845901 | None:intergenic | 30.0% |
| ! | TGTTGTTCACTCTTTTATGT+AGG | - | chr2_2:846010-846029 | Msa0229230:CDS | 30.0% |
| TGAATAAAAAGCAATTCTGG+TGG | + | chr2_2:846075-846094 | None:intergenic | 30.0% | |
| CCATGAATAAAAAGCAATTC+TGG | + | chr2_2:846078-846097 | None:intergenic | 30.0% | |
| !!! | CCAGAATTGCTTTTTATTCA+TGG | - | chr2_2:846075-846094 | Msa0229230:CDS | 30.0% |
| !!! | GAATTGCTTTTTATTCATGG+TGG | - | chr2_2:846078-846097 | Msa0229230:CDS | 30.0% |
| CTGAGTTCAATTACATTAAG+GGG | + | chr2_2:846253-846272 | None:intergenic | 30.0% | |
| CTCAGTTTAGTGTGAAATAT+AGG | - | chr2_2:846268-846287 | Msa0229230:CDS | 30.0% | |
| TTTCAATATGGTATGAGGTA+TGG | - | chr2_2:846365-846384 | Msa0229230:CDS | 30.0% | |
| ACATCACATTTGAGAGAGTT+AGG | - | chr2_2:842359-842378 | Msa0229230:three_prime_UTR | 35.0% | |
| CATCACATTTGAGAGAGTTA+GGG | - | chr2_2:842360-842379 | Msa0229230:three_prime_UTR | 35.0% | |
| !!! | TTAGGGTTTTGAAAGTGGAT+GGG | - | chr2_2:842377-842396 | Msa0229230:three_prime_UTR | 35.0% |
| AAAGAAGACGAAGAAATGAG+AGG | - | chr2_2:842401-842420 | Msa0229230:three_prime_UTR | 35.0% | |
| ! | ACAGATTAATCATGATGGTG+AGG | - | chr2_2:842754-842773 | Msa0229230:CDS | 35.0% |
| GCAATCACAAAACTATTCTG+AGG | + | chr2_2:842800-842819 | None:intergenic | 35.0% | |
| TTACAACTTCCATCAATTGG+AGG | + | chr2_2:842881-842900 | None:intergenic | 35.0% | |
| GGACATAATACTGAAGGTTA+TGG | - | chr2_2:842920-842939 | Msa0229230:intron | 35.0% | |
| AAACAAGGACATTTGCTTAG+TGG | - | chr2_2:842962-842981 | Msa0229230:intron | 35.0% | |
| ! | ATGATGCTCAGATTTGTTTG+TGG | - | chr2_2:842990-843009 | Msa0229230:intron | 35.0% |
| ! | TGATGCTCAGATTTGTTTGT+GGG | - | chr2_2:842991-843010 | Msa0229230:intron | 35.0% |
| GCATCAAGAGACTTATTCTT+AGG | + | chr2_2:843031-843050 | None:intergenic | 35.0% | |
| TTGAGGCATGAGTATTTGTT+TGG | - | chr2_2:843193-843212 | Msa0229230:intron | 35.0% | |
| !! | GAGTATTTGTTTGGTTCTGT+TGG | - | chr2_2:843202-843221 | Msa0229230:intron | 35.0% |
| !! | GTATTTGTTTGGTTCTGTTG+GGG | - | chr2_2:843204-843223 | Msa0229230:intron | 35.0% |
| TGAATCTGTCAAAATGAGCA+TGG | - | chr2_2:843535-843554 | Msa0229230:intron | 35.0% | |
| ATAACATGCACCATTCAAAC+TGG | - | chr2_2:843597-843616 | Msa0229230:CDS | 35.0% | |
| TTTCAACCATCCAGTTTGAA+TGG | + | chr2_2:843610-843629 | None:intergenic | 35.0% | |
| TTCAAACTGGATGGTTGAAA+TGG | - | chr2_2:843610-843629 | Msa0229230:CDS | 35.0% | |
| GCTTTATGTGATGCAAATGT+AGG | - | chr2_2:843648-843667 | Msa0229230:CDS | 35.0% | |
| TATGTGATGCAAATGTAGGA+AGG | - | chr2_2:843652-843671 | Msa0229230:CDS | 35.0% | |
| !!! | TAGTTCATGGTTTGGTTTTG+TGG | - | chr2_2:843735-843754 | Msa0229230:intron | 35.0% |
| !!! | AGTTCATGGTTTGGTTTTGT+GGG | - | chr2_2:843736-843755 | Msa0229230:intron | 35.0% |
| TGAATCTGTCAAAATGAGCA+TGG | - | chr2_2:843535-843554 | Msa0229230:intron | 35.0% | |
| CTGTATCTGTTCACTTAACA+TGG | + | chr2_2:843924-843943 | None:intergenic | 35.0% | |
| CATGTTAAGTGAACAGATAC+AGG | - | chr2_2:843922-843941 | Msa0229230:intron | 35.0% | |
| CGCATCACATAAAATACTTG+AGG | + | chr2_2:843996-844015 | None:intergenic | 35.0% | |
| !! | AAAGTACTGCTCAAGTTGAT+GGG | - | chr2_2:844016-844035 | Msa0229230:intron | 35.0% |
| TGTAGTACACTAGACAAGAT+AGG | - | chr2_2:844117-844136 | Msa0229230:intron | 35.0% | |
| ! | AAATAGTGGAAACTAGGCTT+AGG | - | chr2_2:844192-844211 | Msa0229230:intron | 35.0% |
| GAATTACTAGAGGTAGAAGA+AGG | - | chr2_2:844280-844299 | Msa0229230:intron | 35.0% | |
| !!! | TCACTATGTTTTGATGGGTT+GGG | + | chr2_2:844515-844534 | None:intergenic | 35.0% |
| !!! | ATCACTATGTTTTGATGGGT+TGG | + | chr2_2:844516-844535 | None:intergenic | 35.0% |
| CATAGTGATATTAGACCGAA+AGG | - | chr2_2:844527-844546 | Msa0229230:intron | 35.0% | |
| CAACACAATGTTGAACCTTT+CGG | + | chr2_2:844545-844564 | None:intergenic | 35.0% | |
| TGTGTTGAAAGACTTCATTC+GGG | - | chr2_2:844558-844577 | Msa0229230:intron | 35.0% | |
| CATCGTCAATATTTGAGAAC+TGG | - | chr2_2:844629-844648 | Msa0229230:intron | 35.0% | |
| GTGGCTATATTTCACATATC+TGG | - | chr2_2:844678-844697 | Msa0229230:intron | 35.0% | |
| AAAGTCGAATTAGAGCACAA+CGG | + | chr2_2:844783-844802 | None:intergenic | 35.0% | |
| CTTTCAATCCCTTCAATGAA+TGG | - | chr2_2:844978-844997 | Msa0229230:intron | 35.0% | |
| GCAACTATCCATTCATTGAA+GGG | + | chr2_2:844989-845008 | None:intergenic | 35.0% | |
| AGCAACTATCCATTCATTGA+AGG | + | chr2_2:844990-845009 | None:intergenic | 35.0% | |
| AATGAATGGATAGTTGCTAC+TGG | - | chr2_2:844992-845011 | Msa0229230:intron | 35.0% | |
| GGACAAAACAGTGAAATTGT+GGG | - | chr2_2:845021-845040 | Msa0229230:intron | 35.0% | |
| !!! | ATTGTTGTTTTCGGGTTAAC+AGG | - | chr2_2:845158-845177 | Msa0229230:intron | 35.0% |
| !!! | TTGTTGTTTTCGGGTTAACA+GGG | - | chr2_2:845159-845178 | Msa0229230:intron | 35.0% |
| CCAAGACAGTTTCATTCTTT+GGG | + | chr2_2:845210-845229 | None:intergenic | 35.0% | |
| !! | AATGAAAGCATCACCATATC+TGG | - | chr2_2:845285-845304 | Msa0229230:intron | 35.0% |
| TTCACTAGAAAGTCCAGATA+TGG | + | chr2_2:845301-845320 | None:intergenic | 35.0% | |
| AGAAACTTTAATCCAGTGGA+AGG | + | chr2_2:845418-845437 | None:intergenic | 35.0% | |
| TCTGCCTCTTGAGTTATATT+AGG | - | chr2_2:845520-845539 | Msa0229230:intron | 35.0% | |
| AGGTTCTGTAATGAGACTAA+TGG | - | chr2_2:845540-845559 | Msa0229230:intron | 35.0% | |
| ACATCAAAGTCCAAAGATCA+GGG | + | chr2_2:845629-845648 | None:intergenic | 35.0% | |
| TACATCAAAGTCCAAAGATC+AGG | + | chr2_2:845630-845649 | None:intergenic | 35.0% | |
| !!! | CACCGACTTTTGTTATAGAT+GGG | - | chr2_2:845651-845670 | Msa0229230:CDS | 35.0% |
| !! | ACCGACTTTTGTTATAGATG+GGG | - | chr2_2:845652-845671 | Msa0229230:CDS | 35.0% |
| ACCCCATCTATAACAAAAGT+CGG | + | chr2_2:845656-845675 | None:intergenic | 35.0% | |
| ! | AATCAACAGAAGCATGCAAT+TGG | + | chr2_2:845680-845699 | None:intergenic | 35.0% |
| TAATATTTACTCCTTCGTCC+GGG | - | chr2_2:845804-845823 | Msa0229230:CDS | 35.0% | |
| CATACTTCAAATATGGCAGA+TGG | - | chr2_2:846176-846195 | Msa0229230:CDS | 35.0% | |
| ACAACTACAATTGCGTAGAA+AGG | + | chr2_2:846344-846363 | None:intergenic | 35.0% | |
| ! | AGAAAGTAGTGGGATAGAGA+AGG | - | chr2_2:842290-842309 | Msa0229230:three_prime_UTR | 40.0% |
| ! | GAAAGTAGTGGGATAGAGAA+GGG | - | chr2_2:842291-842310 | Msa0229230:three_prime_UTR | 40.0% |
| ! | AAAGTAGTGGGATAGAGAAG+GGG | - | chr2_2:842292-842311 | Msa0229230:three_prime_UTR | 40.0% |
| !!! | GAGAGTTAGGGTTTTGAAAG+TGG | - | chr2_2:842372-842391 | Msa0229230:three_prime_UTR | 40.0% |
| !!! | GTTAGGGTTTTGAAAGTGGA+TGG | - | chr2_2:842376-842395 | Msa0229230:three_prime_UTR | 40.0% |
| !!! | TAGGGTTTTGAAAGTGGATG+GGG | - | chr2_2:842378-842397 | Msa0229230:three_prime_UTR | 40.0% |
| ! | GAGGTAATTGGGTTCGTTTT+CGG | + | chr2_2:842615-842634 | None:intergenic | 40.0% |
| GGGTTACAACTTCCATCAAT+TGG | + | chr2_2:842884-842903 | None:intergenic | 40.0% | |
| ! | GAAGTTGTAACCCTGATTTG+AGG | - | chr2_2:842891-842910 | Msa0229230:intron | 40.0% |
| ! | AACCCTGATTTGAGGTTAAG+AGG | - | chr2_2:842899-842918 | Msa0229230:intron | 40.0% |
| GTCCTCTTAACCTCAAATCA+GGG | + | chr2_2:842904-842923 | None:intergenic | 40.0% | |
| TGTCCTCTTAACCTCAAATC+AGG | + | chr2_2:842905-842924 | None:intergenic | 40.0% | |
| ! | CTGAAGGTTATGGTTTGTCT+TGG | - | chr2_2:842930-842949 | Msa0229230:intron | 40.0% |
| TCGATTGTTTAGGTCCATGA+AGG | - | chr2_2:843145-843164 | Msa0229230:intron | 40.0% | |
| TGAACAGGCTTAGTAACAGA+CGG | + | chr2_2:843265-843284 | None:intergenic | 40.0% | |
| TGTAAATTAGTGCGAGGGAT+TGG | - | chr2_2:843512-843531 | Msa0229230:intron | 40.0% | |
| ! | GAAGGCCTAGGAGTTTATTT+TGG | - | chr2_2:843670-843689 | Msa0229230:intron | 40.0% |
| TGGAAATTAGTGTGAGGGAT+TGG | - | chr2_2:843865-843884 | Msa0229230:CDS | 40.0% | |
| TGTCAAAATGAGCATGGCAT+GGG | - | chr2_2:843894-843913 | Msa0229230:intron | 40.0% | |
| TGGGTGGTTGAAATGGAATA+GGG | - | chr2_2:843970-843989 | Msa0229230:intron | 40.0% | |
| !! | GAAAGTACTGCTCAAGTTGA+TGG | - | chr2_2:844015-844034 | Msa0229230:intron | 40.0% |
| ! | AAATTAAGCGTGACGGAGAT+AGG | - | chr2_2:844078-844097 | Msa0229230:intron | 40.0% |
| ! | AATTAAGCGTGACGGAGATA+GGG | - | chr2_2:844079-844098 | Msa0229230:intron | 40.0% |
| ACAACATTTGAGAGAGAGCT+GGG | - | chr2_2:844150-844169 | Msa0229230:intron | 40.0% | |
| AAACTAGGCTTAGGTGGTTT+GGG | - | chr2_2:844201-844220 | Msa0229230:intron | 40.0% | |
| CTGATCTATTGTCCTTACGA+CGG | + | chr2_2:844252-844271 | None:intergenic | 40.0% | |
| CGTAAGGACAATAGATCAGA+TGG | - | chr2_2:844253-844272 | Msa0229230:intron | 40.0% | |
| AAGGACAATAGATCAGATGG+AGG | - | chr2_2:844256-844275 | Msa0229230:intron | 40.0% | |
| AGATGGAGGAGAATTACTAG+AGG | - | chr2_2:844270-844289 | Msa0229230:intron | 40.0% | |
| GTGTTGAAAGACTTCATTCG+GGG | - | chr2_2:844559-844578 | Msa0229230:intron | 40.0% | |
| !! | GATAGTTGCTACTGGTTCTA+CGG | - | chr2_2:845000-845019 | Msa0229230:intron | 40.0% |
| CGGACAAAACAGTGAAATTG+TGG | - | chr2_2:845020-845039 | Msa0229230:intron | 40.0% | |
| CCCAAAGAATGAAACTGTCT+TGG | - | chr2_2:845207-845226 | Msa0229230:intron | 40.0% | |
| GCCAAGACAGTTTCATTCTT+TGG | + | chr2_2:845211-845230 | None:intergenic | 40.0% | |
| !! | ACTGAGTTTTGGTATGTTGG+TGG | - | chr2_2:845348-845367 | Msa0229230:intron | 40.0% |
| GGAACTTTAATTCACCCATG+AGG | + | chr2_2:845468-845487 | None:intergenic | 40.0% | |
| CATCAAAGTCCAAAGATCAG+GGG | + | chr2_2:845628-845647 | None:intergenic | 40.0% | |
| !!! | GCACCGACTTTTGTTATAGA+TGG | - | chr2_2:845650-845669 | Msa0229230:CDS | 40.0% |
| GCAAAATATCCGACTTCTCA+TGG | - | chr2_2:846109-846128 | Msa0229230:CDS | 40.0% | |
| ATGGAACCCATGTGAAGATT+GGG | - | chr2_2:846128-846147 | Msa0229230:CDS | 40.0% | |
| CAACAACCCAATCTTCACAT+GGG | + | chr2_2:846137-846156 | None:intergenic | 40.0% | |
| AGGTTGAATGTTTGGGTCTA+AGG | - | chr2_2:846288-846307 | Msa0229230:CDS | 40.0% | |
| AGTAACAGCACGAATACAGA+TGG | + | chr2_2:846321-846340 | None:intergenic | 40.0% | |
| TTGTTATGCGTCGAGTCATT+AGG | - | chr2_2:846441-846460 | Msa0229230:CDS | 40.0% | |
| ! | TTCAGCCACATCGGTTAAAA+GGG | + | chr2_2:846513-846532 | None:intergenic | 40.0% |
| ! | ATTCAGCCACATCGGTTAAA+AGG | + | chr2_2:846514-846533 | None:intergenic | 40.0% |
| ! | AAGTAGTGGGATAGAGAAGG+GGG | - | chr2_2:842293-842312 | Msa0229230:three_prime_UTR | 45.0% |
| ATGACGAGATCGTAGAGGAA+GGG | + | chr2_2:842482-842501 | None:intergenic | 45.0% | |
| ! | TTGGACGGAGTAGTCTTTTC+CGG | + | chr2_2:842567-842586 | None:intergenic | 45.0% |
| TCCGTCCAAAAACTCATCCT+CGG | - | chr2_2:842578-842597 | Msa0229230:three_prime_UTR | 45.0% | |
| TGAGCGAGCATGAGGTAATT+GGG | + | chr2_2:842626-842645 | None:intergenic | 45.0% | |
| TTGAGCGAGCATGAGGTAAT+TGG | + | chr2_2:842627-842646 | None:intergenic | 45.0% | |
| !! | GTAATGACGAGCGTCGTTTT+CGG | + | chr2_2:842672-842691 | None:intergenic | 45.0% |
| ATGGTGAGGTTAATAGAGCG+AGG | - | chr2_2:842768-842787 | Msa0229230:CDS | 45.0% | |
| TACTAAGACGGTTAGTGCTG+AGG | - | chr2_2:842820-842839 | Msa0229230:intron | 45.0% | |
| CCATCAATTGGAGGCTTAGA+AGG | + | chr2_2:842872-842891 | None:intergenic | 45.0% | |
| CCTTCTAAGCCTCCAATTGA+TGG | - | chr2_2:842869-842888 | Msa0229230:intron | 45.0% | |
| !! | TTAGGTCCATGAAGGTGTTG+TGG | - | chr2_2:843153-843172 | Msa0229230:intron | 45.0% |
| CATCTTCCACAACACCTTCA+TGG | + | chr2_2:843162-843181 | None:intergenic | 45.0% | |
| !! | TGAAGGTGTTGTGGAAGATG+TGG | - | chr2_2:843162-843181 | Msa0229230:intron | 45.0% |
| ! | AAGATGTGGCTTGGCATTTG+AGG | - | chr2_2:843176-843195 | Msa0229230:intron | 45.0% |
| TGAGCAATGCAAGACTGAAC+AGG | + | chr2_2:843280-843299 | None:intergenic | 45.0% | |
| TTGCATTGCTCATTCAAGCG+AGG | - | chr2_2:843288-843307 | Msa0229230:intron | 45.0% | |
| TGTCAAAATGAGCATGGCCT+GGG | - | chr2_2:843541-843560 | Msa0229230:intron | 45.0% | |
| ACGTGCTAGGTGCAAAGATA+CGG | - | chr2_2:843568-843587 | Msa0229230:intron | 45.0% | |
| CATGCACCATTCAAACTGGA+TGG | - | chr2_2:843601-843620 | Msa0229230:CDS | 45.0% | |
| TGGATGGTTGAAATGGAGCA+GGG | - | chr2_2:843617-843636 | Msa0229230:CDS | 45.0% | |
| !! | TGCATCACATAAAGCATCGG+AGG | + | chr2_2:843643-843662 | None:intergenic | 45.0% |
| ATGCAAATGTAGGAAGGCCT+AGG | - | chr2_2:843658-843677 | Msa0229230:CDS | 45.0% | |
| CTGTCAAAATGAGCATGGCA+TGG | - | chr2_2:843893-843912 | Msa0229230:intron | 45.0% | |
| GTCAAAATGAGCATGGCATG+GGG | - | chr2_2:843895-843914 | Msa0229230:intron | 45.0% | |
| TAAACACGCACCATTCAAGC+TGG | - | chr2_2:843950-843969 | Msa0229230:intron | 45.0% | |
| AAACACGCACCATTCAAGCT+GGG | - | chr2_2:843951-843970 | Msa0229230:intron | 45.0% | |
| TTTCAACCACCCAGCTTGAA+TGG | + | chr2_2:843963-843982 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr2_2:843963-843982 | Msa0229230:intron | 45.0% | |
| CTGGGTGGTTGAAATGGAAT+AGG | - | chr2_2:843969-843988 | Msa0229230:intron | 45.0% | |
| GACAACATTTGAGAGAGAGC+TGG | - | chr2_2:844149-844168 | Msa0229230:intron | 45.0% | |
| CAACATTTGAGAGAGAGCTG+GGG | - | chr2_2:844151-844170 | Msa0229230:intron | 45.0% | |
| TAGTGGAAACTAGGCTTAGG+TGG | - | chr2_2:844195-844214 | Msa0229230:intron | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr2_2:844200-844219 | Msa0229230:intron | 45.0% | |
| TTGAAAGACTTCATTCGGGG+TGG | - | chr2_2:844562-844581 | Msa0229230:intron | 45.0% | |
| TGAAAGACTTCATTCGGGGT+GGG | - | chr2_2:844563-844582 | Msa0229230:intron | 45.0% | |
| GACAGGAAATTCTATCAGCG+AGG | + | chr2_2:844717-844736 | None:intergenic | 45.0% | |
| !!! | TTGTTTTCGGGTTAACAGGG+AGG | - | chr2_2:845162-845181 | Msa0229230:intron | 45.0% |
| ! | GTCTTGGCTTCTTGTTGTCT+TGG | - | chr2_2:845223-845242 | Msa0229230:intron | 45.0% |
| ! | TGGCTTCTTGTTGTCTTGGT+AGG | - | chr2_2:845227-845246 | Msa0229230:intron | 45.0% |
| TTGTCTTGGTAGGAGACTGA+TGG | - | chr2_2:845237-845256 | Msa0229230:intron | 45.0% | |
| CTTTAATCCAGTGGAAGGAC+CGG | + | chr2_2:845413-845432 | None:intergenic | 45.0% | |
| !! | AGCTCAACTGGTTTGAGCTA+CGG | + | chr2_2:845853-845872 | None:intergenic | 45.0% |
| CTTGAAACATTTGAGGGGGT+TGG | + | chr2_2:845878-845897 | None:intergenic | 45.0% | |
| ACATGGGTTCCATGAGAAGT+CGG | + | chr2_2:846121-846140 | None:intergenic | 45.0% | |
| CATGGAACCCATGTGAAGAT+TGG | - | chr2_2:846127-846146 | Msa0229230:CDS | 45.0% | |
| GCAACAACCCAATCTTCACA+TGG | + | chr2_2:846138-846157 | None:intergenic | 45.0% | |
| ! | AGATTGGGTTGTTGCTAGTG+TGG | - | chr2_2:846143-846162 | Msa0229230:CDS | 45.0% |
| CTGGCATATCATCTTCGTCA+TGG | + | chr2_2:846215-846234 | None:intergenic | 45.0% | |
| ! | CAGATCCCTTTTAACCGATG+TGG | - | chr2_2:846505-846524 | Msa0229230:five_prime_UTR | 45.0% |
| CATTGCAGATTCAGCCACAT+CGG | + | chr2_2:846522-846541 | None:intergenic | 45.0% | |
| GGCAAAATGCTTTCATGCAC+GGG | + | chr2_2:846561-846580 | None:intergenic | 45.0% | |
| GATGACGAGATCGTAGAGGA+AGG | + | chr2_2:842483-842502 | None:intergenic | 50.0% | |
| ! | GAGTGATGACGAGATCGTAG+AGG | + | chr2_2:842487-842506 | None:intergenic | 50.0% |
| TCATCACTCACGCTCTCGAA+TGG | - | chr2_2:842498-842517 | Msa0229230:three_prime_UTR | 50.0% | |
| !! | CCCGAGGATGAGTTTTTGGA+CGG | + | chr2_2:842582-842601 | None:intergenic | 50.0% |
| CCGTCCAAAAACTCATCCTC+GGG | - | chr2_2:842579-842598 | Msa0229230:three_prime_UTR | 50.0% | |
| !! | GGGTTCGTTTTCGGAAGTGT+GGG | + | chr2_2:842606-842625 | None:intergenic | 50.0% |
| ! | TGGGTTCGTTTTCGGAAGTG+TGG | + | chr2_2:842607-842626 | None:intergenic | 50.0% |
| GTTGAACTTGAGCGAGCATG+AGG | + | chr2_2:842634-842653 | None:intergenic | 50.0% | |
| GATGACGATCGTCCTGAAGT+TGG | - | chr2_2:842692-842711 | Msa0229230:CDS | 50.0% | |
| ACGATCGTCCTGAAGTTGGA+GGG | - | chr2_2:842696-842715 | Msa0229230:CDS | 50.0% | |
| CAACCAAACCCTCCAACTTC+AGG | + | chr2_2:842707-842726 | None:intergenic | 50.0% | |
| ! | GAGGGTTTGGTTGTGCGAAT+GGG | - | chr2_2:842714-842733 | Msa0229230:CDS | 50.0% |
| GTTTGGTTGTGCGAATGGGA+AGG | - | chr2_2:842718-842737 | Msa0229230:CDS | 50.0% | |
| GTGTTGTGGAAGATGTGGCT+TGG | - | chr2_2:843167-843186 | Msa0229230:intron | 50.0% | |
| CTGTCAAAATGAGCATGGCC+TGG | - | chr2_2:843540-843559 | Msa0229230:intron | 50.0% | |
| GTCAAAATGAGCATGGCCTG+GGG | - | chr2_2:843542-843561 | Msa0229230:intron | 50.0% | |
| CTGGATGGTTGAAATGGAGC+AGG | - | chr2_2:843616-843635 | Msa0229230:CDS | 50.0% | |
| CGGAGATAGGGATGTTGTGT+TGG | - | chr2_2:844091-844110 | Msa0229230:intron | 50.0% | |
| GACATGTGCATTCCGTCGTA+AGG | - | chr2_2:844237-844256 | Msa0229230:intron | 50.0% | |
| ACAACTGCAGAGTGGAGTCA+TGG | + | chr2_2:844655-844674 | None:intergenic | 50.0% | |
| TCCACTCTGCAGTTGTACAG+TGG | - | chr2_2:844659-844678 | Msa0229230:intron | 50.0% | |
| TTGTGGGATCTGCGCAAGAT+TGG | - | chr2_2:845037-845056 | Msa0229230:intron | 50.0% | |
| !!! | TTTTCGGGTTAACAGGGAGG+AGG | - | chr2_2:845165-845184 | Msa0229230:intron | 50.0% |
| ! | TAACAGGGAGGAGGTTTTCC+AGG | - | chr2_2:845174-845193 | Msa0229230:intron | 50.0% |
| ! | TTGGTAGGAGACTGATGGTG+TGG | - | chr2_2:845242-845261 | Msa0229230:intron | 50.0% |
| ! | TGGTAGGAGACTGATGGTGT+GGG | - | chr2_2:845243-845262 | Msa0229230:intron | 50.0% |
| ! | TGATGGTGTGGGATCTTAGC+AGG | - | chr2_2:845254-845273 | Msa0229230:intron | 50.0% |
| GTCCAAAGATCAGGGGACAT+GGG | + | chr2_2:845621-845640 | None:intergenic | 50.0% | |
| AGTCCAAAGATCAGGGGACA+TGG | + | chr2_2:845622-845641 | None:intergenic | 50.0% | |
| ! | CTACGGGATAACGAGGCATT+GGG | + | chr2_2:845836-845855 | None:intergenic | 50.0% |
| GTTTGAGCTACGGGATAACG+AGG | + | chr2_2:845843-845862 | None:intergenic | 50.0% | |
| !! | GCTCAACTGGTTTGAGCTAC+GGG | + | chr2_2:845852-845871 | None:intergenic | 50.0% |
| TCACCAGAGGATGCTGAAGA+TGG | - | chr2_2:846048-846067 | Msa0229230:CDS | 50.0% | |
| TATGCCAGAACAGTCAGCAC+AGG | - | chr2_2:846227-846246 | Msa0229230:CDS | 50.0% | |
| AGCCATTCGACGGTGAGAGA+TGG | + | chr2_2:842524-842543 | None:intergenic | 55.0% | |
| GCGATCTGGAAGCCATTCGA+CGG | + | chr2_2:842534-842553 | None:intergenic | 55.0% | |
| ! | ACGGAGTAGTCTTTTCCGGC+GGG | + | chr2_2:842563-842582 | None:intergenic | 55.0% |
| ! | GACGGAGTAGTCTTTTCCGG+CGG | + | chr2_2:842564-842583 | None:intergenic | 55.0% |
| ! | GGGTCCCGAGGATGAGTTTT+TGG | + | chr2_2:842586-842605 | None:intergenic | 55.0% |
| ! | CGTTTTCGGAGTCGTCGAGA+GGG | + | chr2_2:842658-842677 | None:intergenic | 55.0% |
| ! | TCGTTTTCGGAGTCGTCGAG+AGG | + | chr2_2:842659-842678 | None:intergenic | 55.0% |
| GACGATCGTCCTGAAGTTGG+AGG | - | chr2_2:842695-842714 | Msa0229230:CDS | 55.0% | |
| CGTCCTGAAGTTGGAGGGTT+TGG | - | chr2_2:842701-842720 | Msa0229230:CDS | 55.0% | |
| ! | GGAGGGTTTGGTTGTGCGAA+TGG | - | chr2_2:842713-842732 | Msa0229230:CDS | 55.0% |
| GCCACTGTACAACTGCAGAG+TGG | + | chr2_2:844663-844682 | None:intergenic | 55.0% | |
| ! | AGGGAGGAGGTTTTCCAGGT+TGG | - | chr2_2:845178-845197 | Msa0229230:intron | 55.0% |
| !! | AGGAGGTTTTCCAGGTTGGC+TGG | - | chr2_2:845182-845201 | Msa0229230:intron | 55.0% |
| ! | TCTTTGGGTTCCAGCCAACC+TGG | + | chr2_2:845195-845214 | None:intergenic | 55.0% |
| !! | CAGTGGAAGGACCGGCTTTT+GGG | + | chr2_2:845405-845424 | None:intergenic | 55.0% |
| CACCCATGTCCCCTGATCTT+TGG | - | chr2_2:845616-845635 | Msa0229230:CDS | 55.0% | |
| TTGGGTTCAAACCCGGACGA+AGG | + | chr2_2:845818-845837 | None:intergenic | 55.0% | |
| !! | CGAGGCATTGGGTTCAAACC+CGG | + | chr2_2:845825-845844 | None:intergenic | 55.0% |
| GCTACGGGATAACGAGGCAT+TGG | + | chr2_2:845837-845856 | None:intergenic | 55.0% | |
| AGGGGGTTGGATAGCTCAAC+TGG | + | chr2_2:845865-845884 | None:intergenic | 55.0% | |
| TGACGAAGAGCAGTCACCAG+AGG | - | chr2_2:846035-846054 | Msa0229230:CDS | 55.0% | |
| GGACCATCTTCAGCATCCTC+TGG | + | chr2_2:846054-846073 | None:intergenic | 55.0% | |
| GGCCATCTCTCACCGTCGAA+TGG | - | chr2_2:842519-842538 | Msa0229230:three_prime_UTR | 60.0% | |
| ! | TTTCGGAAGTGTGGGTCCCG+AGG | + | chr2_2:842598-842617 | None:intergenic | 60.0% |
| TGGCCTGGGGATAACGTGCT+AGG | - | chr2_2:843555-843574 | Msa0229230:intron | 60.0% | |
| GCACCTAGCACGTTATCCCC+AGG | + | chr2_2:843561-843580 | None:intergenic | 60.0% | |
| CACGCACCATTCAAGCTGGG+TGG | - | chr2_2:843954-843973 | Msa0229230:intron | 60.0% | |
| !! | CCAGTGGAAGGACCGGCTTT+TGG | + | chr2_2:845406-845425 | None:intergenic | 60.0% |
| CCAAAAGCCGGTCCTTCCAC+TGG | - | chr2_2:845403-845422 | Msa0229230:intron | 60.0% | |
| CCAGATCGCACTGAACCCGC+CGG | - | chr2_2:842545-842564 | Msa0229230:three_prime_UTR | 65.0% | |
| !! | GGGGCCTGTGCTGACTGTTC+TGG | + | chr2_2:846234-846253 | None:intergenic | 65.0% |
| ! | CCGGCGGGTTCAGTGCGATC+TGG | + | chr2_2:842548-842567 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 842287 | 846580 | 842287 | ID=Msa0229230;Name=Msa0229230 |
| chr2_2 | mRNA | 842287 | 846580 | 842287 | ID=Msa0229230-mRNA-1;Parent=Msa0229230;Name=Msa0229230-mRNA-1;_AED=0.06;_eAED=0.06;_QI=108|1|1|1|1|1|5|323|423 |
| chr2_2 | exon | 842287 | 842835 | 842287 | ID=Msa0229230-mRNA-1:exon:283;Parent=Msa0229230-mRNA-1 |
| chr2_2 | exon | 843592 | 843687 | 843592 | ID=Msa0229230-mRNA-1:exon:282;Parent=Msa0229230-mRNA-1 |
| chr2_2 | exon | 843778 | 843902 | 843778 | ID=Msa0229230-mRNA-1:exon:281;Parent=Msa0229230-mRNA-1 |
| chr2_2 | exon | 845558 | 845710 | 845558 | ID=Msa0229230-mRNA-1:exon:280;Parent=Msa0229230-mRNA-1 |
| chr2_2 | exon | 845801 | 846580 | 845801 | ID=Msa0229230-mRNA-1:exon:279;Parent=Msa0229230-mRNA-1 |
| chr2_2 | five_prime_UTR | 846473 | 846580 | 846473 | ID=Msa0229230-mRNA-1:five_prime_utr;Parent=Msa0229230-mRNA-1 |
| chr2_2 | CDS | 845801 | 846472 | 845801 | ID=Msa0229230-mRNA-1:cds;Parent=Msa0229230-mRNA-1 |
| chr2_2 | CDS | 845558 | 845710 | 845558 | ID=Msa0229230-mRNA-1:cds;Parent=Msa0229230-mRNA-1 |
| chr2_2 | CDS | 843778 | 843902 | 843778 | ID=Msa0229230-mRNA-1:cds;Parent=Msa0229230-mRNA-1 |
| chr2_2 | CDS | 843592 | 843687 | 843592 | ID=Msa0229230-mRNA-1:cds;Parent=Msa0229230-mRNA-1 |
| chr2_2 | CDS | 842610 | 842835 | 842610 | ID=Msa0229230-mRNA-1:cds;Parent=Msa0229230-mRNA-1 |
| chr2_2 | three_prime_UTR | 842287 | 842609 | 842287 | ID=Msa0229230-mRNA-1:three_prime_utr;Parent=Msa0229230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
