AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0058360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 168 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTAATAATTTCAGTTTA+TGG 0.124231 1_2:-14690337 Msa0058360:three_prime_UTR
ATTGATTGATCTTGTATAAA+AGG 0.147618 1_2:+14689664 None:intergenic
CACAAGGTATTTGTGTTAAA+TGG 0.168182 1_2:-14688340 Msa0058360:three_prime_UTR
AATTTGACGGTCTTATAAAT+AGG 0.169429 1_2:+14689695 None:intergenic
TGCTAGAGGATGAAGGTTTC+AGG 0.204895 1_2:-14695352 Msa0058360:five_prime_UTR
CTGTTAGTTGGACTTGTAAT+TGG 0.214635 1_2:-14695571 Msa0058360:five_prime_UTR
TGCTAGTGGATGAAGGTTTC+AGG 0.234532 1_2:-14688612 Msa0058360:three_prime_UTR
TACAGTTAAATGATATATTT+AGG 0.241138 1_2:-14689484 Msa0058360:three_prime_UTR
TTGAGAGGGAAGAGAGAGAT+AGG 0.250737 1_2:-14690117 Msa0058360:three_prime_UTR
CTGTTTGTTGGACTTGTAAT+TGG 0.258855 1_2:-14688849 Msa0058360:three_prime_UTR
TAACTAACCTTCTTCGCTTC+AGG 0.269400 1_2:+14690538 None:intergenic
TAAGCTCTATGGCACCTTAT+TGG 0.273150 1_2:+14695513 None:intergenic
CACAAGGTATCTGTGTTAAA+TGG 0.275289 1_2:-14688158 Msa0058360:three_prime_UTR
CGAAGAGGCAGCTAACTTAT+TGG 0.276899 1_2:-14689096 Msa0058360:three_prime_UTR
AAACAAATCACTTCTGTTCC+AGG 0.295785 1_2:-14695934 Msa0058360:five_prime_UTR
GGGAAGAGAGAGATAGGTTT+GGG 0.296473 1_2:-14690111 Msa0058360:three_prime_UTR
TTGAGAGGGGAGATAGGTTT+GGG 0.299565 1_2:-14688065 Msa0058360:three_prime_UTR
TACTCTACAAGATATATTAC+AGG 0.328683 1_2:+14688655 None:intergenic
TGTCGATTGCTTGTTGAATT+AGG 0.330237 1_2:+14687882 None:intergenic
ATTTGACGGTCTTATAAATA+GGG 0.336933 1_2:+14689696 None:intergenic
TACAACAATCTGCACTCTTC+AGG 0.340368 1_2:+14695487 None:intergenic
ATGAAACTAGGAGTGAAAAT+TGG 0.340498 1_2:+14690598 None:intergenic
TTGTAAATAATCACAAGTTT+TGG 0.346071 1_2:-14696028 Msa0058360:five_prime_UTR
TACTCTACAAGTTCTATTCC+AGG 0.349605 1_2:+14695395 None:intergenic
AAATGCACTTAATTTGGTAT+TGG 0.354016 1_2:-14689401 Msa0058360:three_prime_UTR
AATTCGACTGTGCAGATTCA+TGG 0.355987 1_2:+14695792 None:intergenic
GCCAGGCGTGCTTGCATGGC+AGG 0.363496 1_2:-14688306 Msa0058360:three_prime_UTR
CCAAGCAAGCGCGCCTGACT+TGG 0.365230 1_2:+14690180 None:intergenic
ACAGAGAGGGAAAGGGAGGC+AGG 0.367573 1_2:+14688026 None:intergenic
AGTCGAATTGGTTTATTTGT+TGG 0.369139 1_2:-14695778 Msa0058360:five_prime_UTR
GTCAGGTGCGCTTGCATGGC+AGG 0.373596 1_2:-14688124 Msa0058360:three_prime_UTR
TGCGGATTGCTTGTTGAATT+AGG 0.375558 1_2:+14696166 None:intergenic
ACTTGTAATTGGGTTTCCTT+TGG 0.378309 1_2:-14688838 Msa0058360:three_prime_UTR
ACTTGTAATTGGGTTTCCTT+TGG 0.378309 1_2:-14695560 Msa0058360:five_prime_UTR
ACCTTCTTCGCTTCAGGATC+AGG 0.380592 1_2:+14690544 None:intergenic
TTATCTCTCTTAATAATTGA+AGG 0.382150 1_2:-14689642 Msa0058360:three_prime_UTR
TTGAATCTGCACAGTCGAAT+TGG 0.384452 1_2:-14689139 Msa0058360:three_prime_UTR
ATTCTCTTTGCAGAATTTGT+TGG 0.390864 1_2:-14695189 Msa0058360:intron
ATGAATCTGCACAGTCGAAT+TGG 0.391851 1_2:-14695790 Msa0058360:five_prime_UTR
CTACCAAAGGTGTGCGTGTC+CGG 0.393864 1_2:+14689793 None:intergenic
ACCTGCCATGCAAGCACGCC+TGG 0.397471 1_2:+14688305 None:intergenic
ACTCTCTTTGCAGAATTTGT+TGG 0.397811 1_2:-14688447 Msa0058360:intron
CTATAACTGTCAACATGAAA+TGG 0.399281 1_2:-14695635 Msa0058360:five_prime_UTR
TTTGAGAGGGGAGATAGGTT+TGG 0.402730 1_2:-14688066 Msa0058360:three_prime_UTR
AGGGAAGAGAGAGATAGGTT+TGG 0.411149 1_2:-14690112 Msa0058360:three_prime_UTR
GTATAACTTTCGAATTCAAT+TGG 0.412948 1_2:-14690285 Msa0058360:three_prime_UTR
TGCCGATTGATTGTTGAATT+AGG 0.420408 1_2:+14689941 None:intergenic
GGACAGTACTGGTTGACATT+TGG 0.421403 1_2:-14688885 Msa0058360:three_prime_UTR
CCAAGTCAGGCGCGCTTGCT+TGG 0.430065 1_2:-14690180 Msa0058360:three_prime_UTR
CAATAAGTTAGCTGCCTCTT+CGG 0.433844 1_2:+14689097 None:intergenic
TTGATTGATCTTGTATAAAA+GGG 0.439101 1_2:+14689665 None:intergenic
CTCTTTGCAGAATTTGTTGG+CGG 0.443949 1_2:-14688444 Msa0058360:intron
TGTTAGTTGGACTTGTAATT+GGG 0.444723 1_2:-14695570 Msa0058360:five_prime_UTR
GTCTGTTATAAGCTGTTTGT+TGG 0.445830 1_2:-14688861 Msa0058360:three_prime_UTR
TTCATCCTCTAGCAGCAATC+AGG 0.447395 1_2:+14695361 None:intergenic
TTCATCCACTAGCAGCAATC+AGG 0.448857 1_2:+14688621 None:intergenic
CCATGTCAGGTGCGCTTGCA+TGG 0.454739 1_2:-14688128 Msa0058360:three_prime_UTR
CTCTTTGCAGAATTTGTTGG+CGG 0.457824 1_2:-14695186 Msa0058360:intron
GAATGGATCTTTGCCAAGTC+AGG 0.458335 1_2:-14690193 Msa0058360:three_prime_UTR
AAATGGATCTTTGCCATGTC+AGG 0.459169 1_2:-14688141 Msa0058360:three_prime_UTR
GACACACGACAGAGAGGGAA+AGG 0.459601 1_2:+14688018 None:intergenic
CCATGCAAGCACGCCTGGCA+TGG 0.460216 1_2:+14688310 None:intergenic
TCTTCAGGAAGTAAGCTCTA+TGG 0.460532 1_2:+14695502 None:intergenic
ATGCTATAACGCCACAATAG+TGG 0.461300 1_2:+14695880 None:intergenic
TTGTTCTAAACAGCGGATCC+TGG 0.461879 1_2:+14695916 None:intergenic
AAATGGATCTTCGCCATGCC+AGG 0.464940 1_2:-14688323 Msa0058360:three_prime_UTR
CCATGCAAGCGCACCTGACA+TGG 0.466895 1_2:+14688128 None:intergenic
AACCTAATTCAACAATCAAT+CGG 0.467086 1_2:-14689943 Msa0058360:three_prime_UTR
GAGTGAAAATTGGAGAGAAA+TGG 0.467280 1_2:+14690608 None:intergenic
TGTTTGTTGGACTTGTAATT+GGG 0.471320 1_2:-14688848 Msa0058360:three_prime_UTR
TGTAGTGACCCTTCTGATAG+AGG 0.471575 1_2:+14689740 None:intergenic
TTGGGTTTCCTTTGGATGTG+TGG 0.475566 1_2:-14688830 Msa0058360:three_prime_UTR
TTGGGTTTCCTTTGGATGTG+TGG 0.475566 1_2:-14695552 Msa0058360:five_prime_UTR
ATGTTCGTGTGAATTTCAAT+TGG 0.480350 1_2:-14695160 Msa0058360:CDS
CCATGCCAGGCGTGCTTGCA+TGG 0.481364 1_2:-14688310 Msa0058360:three_prime_UTR
TTCACTCCTAGTTTCATCCA+TGG 0.484143 1_2:-14690592 Msa0058360:CDS
ATGTTCTTGTGAATTTCAAT+TGG 0.484315 1_2:-14688245 Msa0058360:three_prime_UTR
GAGTTGTCAGTTGCAGATAG+AGG 0.485224 1_2:+14689178 None:intergenic
ACACCGGACACGCACACCTT+TGG 0.486229 1_2:-14689796 Msa0058360:three_prime_UTR
GTCAACATGAAATGGCAGTT+GGG 0.486540 1_2:-14695627 Msa0058360:five_prime_UTR
TCCTTGGCATCTTATACAAA+TGG 0.489655 1_2:+14688791 None:intergenic
TTTGTTGGCTCATGACCACT+TGG 0.490504 1_2:-14695763 Msa0058360:five_prime_UTR
CTTTATTAAATTTCTACCAT+AGG 0.493666 1_2:+14696059 None:intergenic
ACAACCATGTAGATATGTAC+TGG 0.501174 1_2:+14695689 None:intergenic
GCTAGAGGATGAAGGTTTCA+GGG 0.506453 1_2:-14695351 Msa0058360:five_prime_UTR
TCGAATTCAATTGGTGAGAT+CGG 0.507570 1_2:-14690276 Msa0058360:three_prime_UTR
GGCAAGACACACACAACAGA+GGG 0.509568 1_2:+14690055 None:intergenic
CATGTGTTGGAGATACTGAT+AGG 0.509796 1_2:-14690398 Msa0058360:three_prime_UTR
TGTCAACATGAAATGGCAGT+TGG 0.510331 1_2:-14695628 Msa0058360:five_prime_UTR
CAAAATATAATAACATCTAA+AGG 0.510483 1_2:+14690307 None:intergenic
ATCACAAGTGTTGGTGTCAG+TGG 0.510721 1_2:-14689763 Msa0058360:three_prime_UTR
CTCTGCTTCAGAAAACTGTC+GGG 0.512188 1_2:+14688571 None:intergenic
TTCTTGTGAATTTCAATTGG+TGG 0.514534 1_2:-14688242 Msa0058360:three_prime_UTR
ACCTGATCCTGAAGCGAAGA+AGG 0.514883 1_2:-14690545 Msa0058360:intron
TGATTGCTGCTAGTGGATGA+AGG 0.517657 1_2:-14688619 Msa0058360:three_prime_UTR
AGAAATTTAATCACAAGTGT+TGG 0.519930 1_2:-14689772 Msa0058360:three_prime_UTR
TACAGTCTTGAAAATAAAGA+CGG 0.521370 1_2:+14695973 None:intergenic
ATCGGCAACACGTTGAGGTA+TGG 0.522223 1_2:-14689925 Msa0058360:three_prime_UTR
GAGGATGAAGGTTTCAGGGC+TGG 0.522981 1_2:-14695347 Msa0058360:five_prime_UTR
ATCGAGATCTCGAAGATCCA+TGG 0.523751 1_2:+14690575 None:intergenic
TGTCAGTGGCCTCTATCAGA+AGG 0.528929 1_2:-14689749 Msa0058360:three_prime_UTR
AAATGGCAGTTGGGAAGTAC+TGG 0.530280 1_2:-14695618 Msa0058360:five_prime_UTR
CACAAACACTGAAACACCTA+TGG 0.531530 1_2:-14696075 Msa0058360:five_prime_UTR
TGTGATTAAATTTCTACCAA+AGG 0.532162 1_2:+14689780 None:intergenic
AAAGGGACAACAAAATTTGA+CGG 0.533761 1_2:+14689682 None:intergenic
ACACACGACAGAGAGGGAAA+GGG 0.533832 1_2:+14688019 None:intergenic
ATCCGCAACACATCGAGGTA+TGG 0.540716 1_2:-14696150 Msa0058360:five_prime_UTR
GACAAGACACACGACAGAGA+GGG 0.541223 1_2:+14688013 None:intergenic
TCTCTGCTTCAGAAAACTGT+CGG 0.542719 1_2:+14688570 None:intergenic
CAGAGAGGGAAAGGGAGGCA+GGG 0.543529 1_2:+14688027 None:intergenic
AGTTATATAGAGTATAAATA+CGG 0.544634 1_2:+14688928 None:intergenic
GTGTCAAATAGCGGCTATTG+TGG 0.544841 1_2:-14689329 Msa0058360:three_prime_UTR
TGCCTACATGAAATGTCAGC+TGG 0.545987 1_2:-14688906 Msa0058360:three_prime_UTR
GTGGATGAAGGTTTCAGGAC+TGG 0.549092 1_2:-14688607 Msa0058360:three_prime_UTR
ATTTCTGTGAGATTTGTGAA+TGG 0.549152 1_2:-14690210 Msa0058360:three_prime_UTR
TCTTGTGAATTTCAATTGGT+GGG 0.549183 1_2:-14688241 Msa0058360:three_prime_UTR
AGCCATACCTCGATGTGTTG+CGG 0.550284 1_2:+14696148 None:intergenic
GGTCTTATAAATATGATATG+TGG 0.550928 1_2:-14689550 Msa0058360:three_prime_UTR
TGATTGCTGCTAGAGGATGA+AGG 0.551028 1_2:-14695359 Msa0058360:five_prime_UTR
ATAAAATTCCACACATCCAA+AGG 0.553755 1_2:+14688822 None:intergenic
ATAAAATTCCACACATCCAA+AGG 0.553755 1_2:+14695544 None:intergenic
ATATCAAGCATTGTGCGACC+TGG 0.555373 1_2:-14695413 Msa0058360:five_prime_UTR
AATCATTTATCTTGCCGAAG+AGG 0.557072 1_2:-14689111 Msa0058360:three_prime_UTR
AGGCAAGACACACACAACAG+AGG 0.557359 1_2:+14690054 None:intergenic
GGAGCATAATAGTAGAGTAA+AGG 0.557905 1_2:+14687939 None:intergenic
TAGTCAAATAGCCGCTATTG+TGG 0.561562 1_2:-14689240 Msa0058360:three_prime_UTR
ACAACCGTGTAGATATGTAC+TGG 0.565298 1_2:+14688966 None:intergenic
TTCTTCGCTTCAGGATCAGG+TGG 0.569099 1_2:+14690547 None:intergenic
AAATGTCAGCTGGACAGTAC+TGG 0.576597 1_2:-14688896 Msa0058360:three_prime_UTR
TCCATTTGTATAAGATGCCA+AGG 0.583389 1_2:-14688792 Msa0058360:three_prime_UTR
GAAGATCCATGGATGAAACT+AGG 0.584670 1_2:+14690586 None:intergenic
GGCAGTTGGGAAGTACTGGT+TGG 0.595815 1_2:-14695614 Msa0058360:five_prime_UTR
CTATCAGTATCTCCAACACA+TGG 0.596329 1_2:+14690399 None:intergenic
CACGACAGAGAGGGAAAGGG+AGG 0.596663 1_2:+14688022 None:intergenic
TCTTCAGCTAGTAAGCTCCT+TGG 0.600881 1_2:+14688775 None:intergenic
AATCAATCGGCAACACGTTG+AGG 0.601377 1_2:-14689930 Msa0058360:three_prime_UTR
TATACGTATCACAGTTCAAG+TGG 0.604415 1_2:+14689026 None:intergenic
TCTCTGCTTCAGAAAACTGT+AGG 0.606090 1_2:+14695310 None:intergenic
ATGCTATAACGCCACAATAG+CGG 0.607191 1_2:+14689229 None:intergenic
GTGATGCGTGCACTATTACA+AGG 0.611722 1_2:-14689980 Msa0058360:three_prime_UTR
TAGTCAAATAGCCACTATTG+TGG 0.613442 1_2:-14695891 Msa0058360:five_prime_UTR
GGAAGAGAGAGATAGGTTTG+GGG 0.617373 1_2:-14690110 Msa0058360:three_prime_UTR
GACTACATTGTTCTAAACAG+CGG 0.620215 1_2:+14695909 None:intergenic
TCACAGTTCAAGTGGTCATG+AGG 0.620580 1_2:+14689034 None:intergenic
GTCAGTGGCCTCTATCAGAA+GGG 0.622830 1_2:-14689748 Msa0058360:three_prime_UTR
AGACAAGACACACGACAGAG+AGG 0.623047 1_2:+14688012 None:intergenic
GAAGACCTGATTGCTGCTAG+TGG 0.627925 1_2:-14688626 Msa0058360:three_prime_UTR
TGAAAATTGGAGAGAAATGG+TGG 0.630936 1_2:+14690611 None:intergenic
ACAGAGGGAAAGATAGAGAG+AGG 0.632585 1_2:+14690070 None:intergenic
TGAGAGGGGAGATAGGTTTG+GGG 0.633998 1_2:-14688064 Msa0058360:three_prime_UTR
ATTGCCGAGATCAGAAGTCG+TGG 0.641097 1_2:-14688400 Msa0058360:three_prime_UTR
GCATCCACGACTTCTGATCT+CGG 0.645336 1_2:+14688396 None:intergenic
ATTGGTGGGATCAGAAGTCG+AGG 0.658512 1_2:-14688227 Msa0058360:three_prime_UTR
TTATAAATATGATATGTGGA+CGG 0.658537 1_2:-14689546 Msa0058360:three_prime_UTR
TTATACTATCACAGTCCAAG+TGG 0.658776 1_2:+14695748 None:intergenic
GAAGACCTGATTGCTGCTAG+AGG 0.659502 1_2:-14695366 Msa0058360:five_prime_UTR
AGTATATACACAACAACACA+AGG 0.665437 1_2:-14688356 Msa0058360:three_prime_UTR
GAGGGAAAGATAGAGAGAGG+CGG 0.671440 1_2:+14690073 None:intergenic
TCTAAGTTAGTGTCAAATAG+CGG 0.674673 1_2:-14689338 Msa0058360:three_prime_UTR
AGCTTACTAGCTGAAGAGTG+CGG 0.679589 1_2:-14688769 Msa0058360:three_prime_UTR
GTCCAGCTGACATTTCATGT+AGG 0.688195 1_2:+14688904 None:intergenic
GCTCCACACATAAAATCACA+AGG 0.691627 1_2:-14687921 Msa0058360:three_prime_UTR
TAAATATGATATGTGGACGG+AGG 0.699407 1_2:-14689543 Msa0058360:three_prime_UTR
AGTCTTGAAAATAAAGACGG+AGG 0.702203 1_2:+14695976 None:intergenic
GGTCTTATAAATAGGGACAG+AGG 0.702607 1_2:+14689703 None:intergenic
AAGCAATCCGCAACACATCG+AGG 0.722711 1_2:-14696155 Msa0058360:five_prime_UTR
AGTATATACACAATAGCACA+AGG 0.730725 1_2:-14688174 Msa0058360:three_prime_UTR
AGTATGAAGAACAGACACAC+CGG 0.736439 1_2:-14689812 Msa0058360:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTTTTTTTTTTTT+AGG - chr1_2:14691791-14691810 Msa0058360:intron 0.0%
!!! TAATTTTTTTTTTTTTTTTA+GGG - chr1_2:14691792-14691811 Msa0058360:intron 0.0%
!!! GTTTTAATAATTTTTTTAGT+CGG - chr1_2:14690646-14690665 Msa0058360:intron 10.0%
!!! TTTTAATTAACAAAAGAATT+TGG + chr1_2:14692830-14692849 None:intergenic 10.0%
!!! TCAAAACAATTTAGATTTTT+CGG + chr1_2:14689027-14689046 None:intergenic 15.0%
!!! TTTCAATATTAAACGATTTT+GGG - chr1_2:14690445-14690464 Msa0058360:intron 15.0%
!! AAGATTGAATCTTAAAATTT+AGG - chr1_2:14691680-14691699 Msa0058360:intron 15.0%
!! GTTCTACATAAAAATATTAT+CGG + chr1_2:14691821-14691840 None:intergenic 15.0%
!!! ATATTTTTATGTAGAACAAA+TGG - chr1_2:14691824-14691843 Msa0058360:intron 15.0%
!!! TATTTTTATGTAGAACAAAT+GGG - chr1_2:14691825-14691844 Msa0058360:intron 15.0%
!!! TTTTTTTTAGAAAACATAAC+TGG - chr1_2:14691994-14692013 Msa0058360:intron 15.0%
!!! AATTGTTTAAAATTCAGAAT+AGG - chr1_2:14692055-14692074 Msa0058360:intron 15.0%
!!! AGATTATAAGATTTTATCAA+AGG + chr1_2:14693074-14693093 None:intergenic 15.0%
!! TAATCTTATCTTTACATTAT+TGG - chr1_2:14693088-14693107 Msa0058360:intron 15.0%
!! TTGTTAATAATTTCAGTTTA+TGG - chr1_2:14693702-14693721 Msa0058360:intron 15.0%
!! CAAAATATAATAACATCTAA+AGG + chr1_2:14693735-14693754 None:intergenic 15.0%
!! TACAGTTAAATGATATATTT+AGG - chr1_2:14694555-14694574 Msa0058360:intron 15.0%
!! ATAAAAAAATGCACTTAATT+TGG - chr1_2:14694632-14694651 Msa0058360:intron 15.0%
!! AGTTATATAGAGTATAAATA+CGG + chr1_2:14695114-14695133 None:intergenic 15.0%
!!! TAAAAACAATTCAGATTTTT+CGG + chr1_2:14695760-14695779 None:intergenic 15.0%
!! CTTTATTAAATTTCTACCAT+AGG + chr1_2:14687983-14688002 None:intergenic 20.0%
!!! TTGTAAATAATCACAAGTTT+TGG - chr1_2:14688011-14688030 Msa0058360:three_prime_UTR 20.0%
!!! AAGTGATTTGTTTTAAATAG+CGG + chr1_2:14688098-14688117 None:intergenic 20.0%
!!! TCTAAATTGTTTTGATTTGT+TGG - chr1_2:14689032-14689051 Msa0058360:three_prime_UTR 20.0%
!!! GTAACTTCATTAAGATTTTT+CGG + chr1_2:14689209-14689228 None:intergenic 20.0%
!!! TACATTAATTTTGTTTTGAG+AGG - chr1_2:14689226-14689245 Msa0058360:three_prime_UTR 20.0%
!!! ACATTAATTTTGTTTTGAGA+GGG - chr1_2:14689227-14689246 Msa0058360:three_prime_UTR 20.0%
!!! TACAATCCTTGTAATTTTAT+GGG + chr1_2:14689366-14689385 None:intergenic 20.0%
!!! TTACAATCCTTGTAATTTTA+TGG + chr1_2:14689367-14689386 None:intergenic 20.0%
!! TGGTTTATGATTAAAATTGA+AGG - chr1_2:14689517-14689536 Msa0058360:three_prime_UTR 20.0%
!! TTTCATCCTGATAAAAAAAA+TGG + chr1_2:14690188-14690207 None:intergenic 20.0%
!!! CAACATTTTTAACACTAAAT+TGG + chr1_2:14690211-14690230 None:intergenic 20.0%
!! TTAGTGTTAAAAATGTTGTA+TGG - chr1_2:14690213-14690232 Msa0058360:three_prime_UTR 20.0%
!!! AATACAGTTCATTTTTTTCT+AGG - chr1_2:14690367-14690386 Msa0058360:three_prime_UTR 20.0%
!!! CTTTCAATATTAAACGATTT+TGG - chr1_2:14690444-14690463 Msa0058360:intron 20.0%
!! TGGAGTATATAATATTATGA+TGG - chr1_2:14690839-14690858 Msa0058360:intron 20.0%
!! TAATATTATGATGGTTATTC+AGG - chr1_2:14690848-14690867 Msa0058360:intron 20.0%
!! AATATTATGATGGTTATTCA+GGG - chr1_2:14690849-14690868 Msa0058360:intron 20.0%
!! AAAGCCAAAAATTAATTAGT+TGG + chr1_2:14691020-14691039 None:intergenic 20.0%
!! CAAATTTATAAGTCACAAAT+TGG + chr1_2:14691059-14691078 None:intergenic 20.0%
!!! AAATAGTACAAGGAAAATTT+TGG - chr1_2:14691190-14691209 Msa0058360:intron 20.0%
!! TGAATATTAATTCCTTTCAA+AGG - chr1_2:14691244-14691263 Msa0058360:intron 20.0%
!!! TTAGTTGATATTTACTCATT+TGG + chr1_2:14691301-14691320 None:intergenic 20.0%
!! AACTAAAAGTTTCCTTAAAA+TGG - chr1_2:14691315-14691334 Msa0058360:intron 20.0%
!! TATGAATGAATAGTGAATTT+AGG - chr1_2:14691712-14691731 Msa0058360:intron 20.0%
!!! ATTTTTATGTAGAACAAATG+GGG - chr1_2:14691826-14691845 Msa0058360:intron 20.0%
!!! TTTCTAAAAAAAATAGACCA+TGG + chr1_2:14691987-14692006 None:intergenic 20.0%
!!! TTTAATCTGAAGTTAGAATA+CGG + chr1_2:14692588-14692607 None:intergenic 20.0%
!! ATCAAAACAAGAAGTTTAAT+AGG - chr1_2:14692718-14692737 Msa0058360:intron 20.0%
!! ATCTTTACATTATTGGAAAA+AGG - chr1_2:14693095-14693114 Msa0058360:intron 20.0%
!! TCTTTACATTATTGGAAAAA+GGG - chr1_2:14693096-14693115 Msa0058360:intron 20.0%
!! TAAACTAATACTGTTTGATA+CGG + chr1_2:14693173-14693192 None:intergenic 20.0%
!!! TATCAAACAGTATTAGTTTA+TGG - chr1_2:14693173-14693192 Msa0058360:intron 20.0%
!!! ATCAAACAGTATTAGTTTAT+GGG - chr1_2:14693174-14693193 Msa0058360:intron 20.0%
!!! TTTCGTTTTTTTAAGCTTTT+GGG + chr1_2:14693204-14693223 None:intergenic 20.0%
!!! TTTTCGTTTTTTTAAGCTTT+TGG + chr1_2:14693205-14693224 None:intergenic 20.0%
!! TTTATATAAAGTGAGTTATG+GGG + chr1_2:14693346-14693365 None:intergenic 20.0%
!! GTTTATATAAAGTGAGTTAT+GGG + chr1_2:14693347-14693366 None:intergenic 20.0%
!!! GCAATTTTATTAAGCTTTTT+CGG + chr1_2:14693890-14693909 None:intergenic 20.0%
!! TTGATTGATCTTGTATAAAA+GGG + chr1_2:14694377-14694396 None:intergenic 20.0%
!! ATTGATTGATCTTGTATAAA+AGG + chr1_2:14694378-14694397 None:intergenic 20.0%
!! TTATCTCTCTTAATAATTGA+AGG - chr1_2:14694397-14694416 Msa0058360:intron 20.0%
!! TTATAAATATGATATGTGGA+CGG - chr1_2:14694493-14694512 Msa0058360:intron 20.0%
!!! TTTTTGTAAAAAACTCTGAA+CGG - chr1_2:14695295-14695314 Msa0058360:exon 20.0%
!!! TCTGAATTGTTTTTATTTGT+TGG - chr1_2:14695765-14695784 Msa0058360:five_prime_UTR 20.0%
!!! GTAACTTCATTAAGATTTTT+CGG + chr1_2:14689209-14689228 None:intergenic 20.0%
! TACAGTCTTGAAAATAAAGA+CGG + chr1_2:14688069-14688088 None:intergenic 25.0%
! CTGGAAAAAGCAAATAAAAT+TGG + chr1_2:14688334-14688353 None:intergenic 25.0%
!! TTTTATCGTATGAACCAATA+AGG - chr1_2:14688512-14688531 Msa0058360:intron 25.0%
! ATGTTCTTGTGAATTTCAAT+TGG - chr1_2:14689061-14689080 Msa0058360:three_prime_UTR 25.0%
!!! CATTAATTTTGTTTTGAGAG+GGG - chr1_2:14689228-14689247 Msa0058360:three_prime_UTR 25.0%
! ACAAATAATGTCATGAATTC+AGG + chr1_2:14689498-14689517 None:intergenic 25.0%
! TGAATTCATGACATTATTTG+TGG - chr1_2:14689497-14689516 Msa0058360:three_prime_UTR 25.0%
! AAATCTGTATATAACAGACT+TGG - chr1_2:14689608-14689627 Msa0058360:three_prime_UTR 25.0%
! AACTAGCACTTATAATACAA+CGG + chr1_2:14689838-14689857 None:intergenic 25.0%
!! TTTTTAGATGACGATGTTAT+TGG - chr1_2:14690155-14690174 Msa0058360:three_prime_UTR 25.0%
!! TTTTAGATGACGATGTTATT+GGG - chr1_2:14690156-14690175 Msa0058360:three_prime_UTR 25.0%
!!! ATTGCTCCATTTTTTTTATC+AGG - chr1_2:14690179-14690198 Msa0058360:three_prime_UTR 25.0%
! ATATTATATACTCCAATGAC+AGG + chr1_2:14690834-14690853 None:intergenic 25.0%
! TGAAGAAAGTTAAATTAGAG+GGG + chr1_2:14690982-14691001 None:intergenic 25.0%
! GTGAAGAAAGTTAAATTAGA+GGG + chr1_2:14690983-14691002 None:intergenic 25.0%
!! CTCTCCAACTAATTAATTTT+TGG - chr1_2:14691013-14691032 Msa0058360:intron 25.0%
!! TCTAAAATGCATTTGAAATG+AGG - chr1_2:14691095-14691114 Msa0058360:intron 25.0%
! ATCTAAAAGAGTAACCTAAA+GGG + chr1_2:14691217-14691236 None:intergenic 25.0%
! TATCTAAAAGAGTAACCTAA+AGG + chr1_2:14691218-14691237 None:intergenic 25.0%
! AATGTAGTGTTAATAATGAC+AGG - chr1_2:14691503-14691522 Msa0058360:intron 25.0%
!!! AAACACTATTTGTTATACTG+AGG - chr1_2:14691594-14691613 Msa0058360:intron 25.0%
!!! AACACTATTTGTTATACTGA+GGG - chr1_2:14691595-14691614 Msa0058360:intron 25.0%
!!! TGTTTGCATGATTTTTTTCT+CGG - chr1_2:14691630-14691649 Msa0058360:intron 25.0%
! CACAACAAATTATATATCAC+AGG + chr1_2:14691738-14691757 None:intergenic 25.0%
!! TTTTTATGTAGAACAAATGG+GGG - chr1_2:14691827-14691846 Msa0058360:intron 25.0%
!!! ACGTTTTAGTATTTCTCTTT+TGG - chr1_2:14691932-14691951 Msa0058360:intron 25.0%
!! CTCTTTTGGATATTCTTATT+TGG - chr1_2:14691946-14691965 Msa0058360:intron 25.0%
! ACGCATTGAATAACTATAAA+TGG + chr1_2:14692020-14692039 None:intergenic 25.0%
! GAAAACTTTCCATCTAATTA+AGG + chr1_2:14692392-14692411 None:intergenic 25.0%
!! AAAGTTTTCTATAGCATACA+GGG - chr1_2:14692403-14692422 Msa0058360:intron 25.0%
!!! AGTTTTAATTTTTGAGCACT+TGG - chr1_2:14692498-14692517 Msa0058360:intron 25.0%
!!! GTTTTAATTTTTGAGCACTT+GGG - chr1_2:14692499-14692518 Msa0058360:intron 25.0%
!! CTCTAGAAGTATATATTACA+GGG + chr1_2:14692934-14692953 None:intergenic 25.0%
! CTTTCATAGTCACAAAATTA+TGG - chr1_2:14692959-14692978 Msa0058360:intron 25.0%
! TACAAATATAAAACTCCCAT+TGG - chr1_2:14693127-14693146 Msa0058360:intron 25.0%
! GGTTTATATAAAGTGAGTTA+TGG + chr1_2:14693348-14693367 None:intergenic 25.0%
! GTATAACTTTCGAATTCAAT+TGG - chr1_2:14693754-14693773 Msa0058360:intron 25.0%
! AACCTAATTCAACAATCAAT+CGG - chr1_2:14694096-14694115 Msa0058360:intron 25.0%
! TGTGATTAAATTTCTACCAA+AGG + chr1_2:14694262-14694281 None:intergenic 25.0%
! AGAAATTTAATCACAAGTGT+TGG - chr1_2:14694267-14694286 Msa0058360:intron 25.0%
!! ATTTGACGGTCTTATAAATA+GGG + chr1_2:14694346-14694365 None:intergenic 25.0%
!! AATTTGACGGTCTTATAAAT+AGG + chr1_2:14694347-14694366 None:intergenic 25.0%
!! GGTCTTATAAATATGATATG+TGG - chr1_2:14694489-14694508 Msa0058360:intron 25.0%
!! AAATGCACTTAATTTGGTAT+TGG - chr1_2:14694638-14694657 Msa0058360:intron 25.0%
!!! CTACACTTTGTTTTAAATAG+CGG + chr1_2:14694782-14694801 None:intergenic 25.0%
! TACTCTACAAGATATATTAC+AGG + chr1_2:14695387-14695406 None:intergenic 25.0%
! ATGTTCTTGTGAATTTCAAT+TGG - chr1_2:14689061-14689080 Msa0058360:three_prime_UTR 25.0%
!!! TACAGTTATTTTGTTTTGAG+AGG - chr1_2:14695959-14695978 Msa0058360:five_prime_UTR 25.0%
!!! ACAGTTATTTTGTTTTGAGA+GGG - chr1_2:14695960-14695979 Msa0058360:five_prime_UTR 25.0%
!! ATAATCACAAGTTTTGGTGT+AGG - chr1_2:14688017-14688036 Msa0058360:three_prime_UTR 30.0%
!! TAATCACAAGTTTTGGTGTA+GGG - chr1_2:14688018-14688037 Msa0058360:three_prime_UTR 30.0%
! AGTCGAATTGGTTTATTTGT+TGG - chr1_2:14688261-14688280 Msa0058360:three_prime_UTR 30.0%
! TTTTCCAGTACATATCTACA+TGG - chr1_2:14688346-14688365 Msa0058360:three_prime_UTR 30.0%
CTATAACTGTCAACATGAAA+TGG - chr1_2:14688404-14688423 Msa0058360:three_prime_UTR 30.0%
! TTCTTTTCTAAGCTGTTAGT+TGG - chr1_2:14688456-14688475 Msa0058360:intron 30.0%
TGTTAGTTGGACTTGTAATT+GGG - chr1_2:14688469-14688488 Msa0058360:intron 30.0%
ATAAAATTCCACACATCCAA+AGG + chr1_2:14688498-14688517 None:intergenic 30.0%
ATTCTCTTTGCAGAATTTGT+TGG - chr1_2:14688850-14688869 Msa0058360:three_prime_UTR 30.0%
ATGTTCGTGTGAATTTCAAT+TGG - chr1_2:14688879-14688898 Msa0058360:three_prime_UTR 30.0%
AGTATATACACAACAACACA+AGG - chr1_2:14688950-14688969 Msa0058360:three_prime_UTR 30.0%
GAGCATAATGGTAAAGTAAA+AGG + chr1_2:14689341-14689360 None:intergenic 30.0%
! AATCCTTGTAATTTTATGGG+TGG + chr1_2:14689363-14689382 None:intergenic 30.0%
ATTCAGGAGAGAATAAATTC+TGG + chr1_2:14689482-14689501 None:intergenic 30.0%
ATGATTAAAATTGAAGGCCA+TGG - chr1_2:14689523-14689542 Msa0058360:three_prime_UTR 30.0%
TATATAACAGACTTGGCATT+GGG - chr1_2:14689615-14689634 Msa0058360:three_prime_UTR 30.0%
!! ACATGAAATGACTTTGAAAC+TGG - chr1_2:14689755-14689774 Msa0058360:three_prime_UTR 30.0%
! AACTGGCACTTTTAATACAA+CGG + chr1_2:14689792-14689811 None:intergenic 30.0%
GTTGTATTATAAGTGCTAGT+TGG - chr1_2:14689837-14689856 Msa0058360:three_prime_UTR 30.0%
! AGGGTCATTAGATGTTTTAT+TGG - chr1_2:14690072-14690091 Msa0058360:three_prime_UTR 30.0%
!! GTCATTAGATGTTTTATTGG+AGG - chr1_2:14690075-14690094 Msa0058360:three_prime_UTR 30.0%
AACATCGTCATCTAAAAATG+AGG + chr1_2:14690153-14690172 None:intergenic 30.0%
TAGTCTAAATATTCAATGCC+AGG - chr1_2:14690285-14690304 Msa0058360:three_prime_UTR 30.0%
AGTCTAAATATTCAATGCCA+GGG - chr1_2:14690286-14690305 Msa0058360:three_prime_UTR 30.0%
TTCCATGACCAATAGAAAAA+GGG + chr1_2:14690333-14690352 None:intergenic 30.0%
TTTCCATGACCAATAGAAAA+AGG + chr1_2:14690334-14690353 None:intergenic 30.0%
! TATTAAACGATTTTGGGCTA+TGG - chr1_2:14690451-14690470 Msa0058360:intron 30.0%
! ATTAAACGATTTTGGGCTAT+GGG - chr1_2:14690452-14690471 Msa0058360:intron 30.0%
ATTGAGATATTCCAGACTAT+TGG - chr1_2:14690513-14690532 Msa0058360:intron 30.0%
!! TGTCCATGTTAATGTTTTTG+TGG - chr1_2:14690611-14690630 Msa0058360:CDS 30.0%
AGCATGTAACTTGATATCTT+TGG - chr1_2:14690696-14690715 Msa0058360:intron 30.0%
!! TGACTAGTTTCTAGTGATAT+TGG - chr1_2:14690729-14690748 Msa0058360:intron 30.0%
!! GACTAGTTTCTAGTGATATT+GGG - chr1_2:14690730-14690749 Msa0058360:intron 30.0%
! GCAATGGAAAAGAGATTTTA+AGG + chr1_2:14690932-14690951 None:intergenic 30.0%
GAAGAAAGTTAAATTAGAGG+GGG + chr1_2:14690981-14691000 None:intergenic 30.0%
GGTGAAGAAAGTTAAATTAG+AGG + chr1_2:14690984-14691003 None:intergenic 30.0%
TTAGTTGGAGAGATATATAC+AGG + chr1_2:14691005-14691024 None:intergenic 30.0%
GATCACTAGAAAATAGTACA+AGG - chr1_2:14691180-14691199 Msa0058360:intron 30.0%
TCTAAAAGAGTAACCTAAAG+GGG + chr1_2:14691216-14691235 None:intergenic 30.0%
ACTGATGTTTATCCTTTGAA+AGG + chr1_2:14691259-14691278 None:intergenic 30.0%
!! ACACTATTTGTTATACTGAG+GGG - chr1_2:14691596-14691615 Msa0058360:intron 30.0%
!!! GTTTGCATGATTTTTTTCTC+GGG - chr1_2:14691631-14691650 Msa0058360:intron 30.0%
TAAAACGTAAATCTATACGC+TGG + chr1_2:14691920-14691939 None:intergenic 30.0%
! GGAAAAAATGTGTTTTTCCA+TGG - chr1_2:14691967-14691986 Msa0058360:intron 30.0%
!! TTTGAAAGTATTTAACCCTC+TGG - chr1_2:14692080-14692099 Msa0058360:intron 30.0%
CTAACATGATTGACAAAAGT+CGG + chr1_2:14692187-14692206 None:intergenic 30.0%
!! TTACTTTTAAACACCGATCT+AGG + chr1_2:14692269-14692288 None:intergenic 30.0%
TAAGAAGTGAAAGTAACCTA+CGG + chr1_2:14692294-14692313 None:intergenic 30.0%
! TAGGTTACTTTCACTTCTTA+AGG - chr1_2:14692294-14692313 Msa0058360:intron 30.0%
TGATGTCAACCTTAATTAGA+TGG - chr1_2:14692380-14692399 Msa0058360:intron 30.0%
! GAAAGTTTTCTATAGCATAC+AGG - chr1_2:14692402-14692421 Msa0058360:intron 30.0%
!!! ACGAGAAGAACTTGTTTTTT+AGG - chr1_2:14692524-14692543 Msa0058360:intron 30.0%
CTTCAGATTAAAATGAGTAG+AGG - chr1_2:14692596-14692615 Msa0058360:intron 30.0%
ATTGTCTCATTTGTCAAGTA+TGG + chr1_2:14692689-14692708 None:intergenic 30.0%
TTCCTTCATATAAATCCACA+GGG - chr1_2:14692750-14692769 Msa0058360:intron 30.0%
!! GCTCTAGAAGTATATATTAC+AGG + chr1_2:14692935-14692954 None:intergenic 30.0%
AGGTGTTCAAAATGTATGAT+TGG - chr1_2:14693027-14693046 Msa0058360:intron 30.0%
TACATTATTGGAAAAAGGGA+AGG - chr1_2:14693100-14693119 Msa0058360:intron 30.0%
ACATTATTGGAAAAAGGGAA+GGG - chr1_2:14693101-14693120 Msa0058360:intron 30.0%
AATATAAAACTCCCATTGGT+AGG - chr1_2:14693131-14693150 Msa0058360:intron 30.0%
!!! GTTTTTTTAAGCTTTTGGGA+AGG + chr1_2:14693200-14693219 None:intergenic 30.0%
GATTGATTAAGTAAGTTAGG+CGG + chr1_2:14693285-14693304 None:intergenic 30.0%
CCAGATTGATTAAGTAAGTT+AGG + chr1_2:14693288-14693307 None:intergenic 30.0%
CCTAACTTACTTAATCAATC+TGG - chr1_2:14693285-14693304 Msa0058360:intron 30.0%
GGTAAGAAATGGTTTATGAT+CGG + chr1_2:14693369-14693388 None:intergenic 30.0%
TAATAATGCTATGTTTCACG+CGG + chr1_2:14693405-14693424 None:intergenic 30.0%
ATGAAACTAGGAGTGAAAAT+TGG + chr1_2:14693444-14693463 None:intergenic 30.0%
ATTTCTGTGAGATTTGTGAA+TGG - chr1_2:14693829-14693848 Msa0058360:intron 30.0%
!!! TGCAGTTATTTTGTTTTGAG+AGG - chr1_2:14693907-14693926 Msa0058360:intron 30.0%
!!! GCAGTTATTTTGTTTTGAGA+GGG - chr1_2:14693908-14693927 Msa0058360:intron 30.0%
ATAGAAAAAAGAGATGCAAG+AGG + chr1_2:14694008-14694027 None:intergenic 30.0%
AAAGGGACAACAAAATTTGA+CGG + chr1_2:14694360-14694379 None:intergenic 30.0%
!! ATTCTCTCGCTTTTATCAAA+AGG - chr1_2:14694467-14694486 Msa0058360:intron 30.0%
!! TTCTCTCGCTTTTATCAAAA+GGG - chr1_2:14694468-14694487 Msa0058360:intron 30.0%
TCTAAGTTAGTGTCAAATAG+CGG - chr1_2:14694701-14694720 Msa0058360:intron 30.0%
! TTTTCCAGTACATATCTACA+CGG - chr1_2:14688346-14688365 Msa0058360:three_prime_UTR 30.0%
! TGTTTGTTGGACTTGTAATT+GGG - chr1_2:14695191-14695210 Msa0058360:intron 30.0%
ATAAAATTCCACACATCCAA+AGG + chr1_2:14688498-14688517 None:intergenic 30.0%
AGTATATACACAACAACACA+AGG - chr1_2:14688950-14688969 Msa0058360:three_prime_UTR 30.0%
! CACAAGGTATTTGTGTTAAA+TGG - chr1_2:14695699-14695718 Msa0058360:five_prime_UTR 30.0%
TTCTTGTGAATTTCAATTGG+TGG - chr1_2:14689064-14689083 Msa0058360:three_prime_UTR 30.0%
TCTTGTGAATTTCAATTGGT+GGG - chr1_2:14689065-14689084 Msa0058360:three_prime_UTR 30.0%
AGTATATACACAATAGCACA+AGG - chr1_2:14695865-14695884 Msa0058360:five_prime_UTR 30.0%
!!! CAGTTATTTTGTTTTGAGAG+GGG - chr1_2:14693909-14693928 Msa0058360:intron 30.0%
! AATCCTTGTGATTTTATGTG+TGG + chr1_2:14696124-14696143 None:intergenic 30.0%
AGTCTTGAAAATAAAGACGG+AGG + chr1_2:14688066-14688085 None:intergenic 35.0%
AAACAAATCACTTCTGTTCC+AGG - chr1_2:14688105-14688124 Msa0058360:three_prime_UTR 35.0%
! GACTACATTGTTCTAAACAG+CGG + chr1_2:14688133-14688152 None:intergenic 35.0%
TAGTCAAATAGCCACTATTG+TGG - chr1_2:14688148-14688167 Msa0058360:three_prime_UTR 35.0%
TTATACTATCACAGTCCAAG+TGG + chr1_2:14688294-14688313 None:intergenic 35.0%
ACAACCATGTAGATATGTAC+TGG + chr1_2:14688353-14688372 None:intergenic 35.0%
CTGTTAGTTGGACTTGTAAT+TGG - chr1_2:14688468-14688487 Msa0058360:intron 35.0%
ACTTGTAATTGGGTTTCCTT+TGG - chr1_2:14688479-14688498 Msa0058360:intron 35.0%
TACTCTACAAGTTCTATTCC+AGG + chr1_2:14688647-14688666 None:intergenic 35.0%
! AGGTCATTCAATGCTTTTGT+TGG - chr1_2:14688752-14688771 Msa0058360:three_prime_UTR 35.0%
! TCATTCAATGCTTTTGTTGG+AGG - chr1_2:14688755-14688774 Msa0058360:three_prime_UTR 35.0%
!! AATGCTTTTGTTGGAGGTAT+AGG - chr1_2:14688761-14688780 Msa0058360:three_prime_UTR 35.0%
! CACAAGGTATCTGTGTTAAA+TGG - chr1_2:14688966-14688985 Msa0058360:three_prime_UTR 35.0%
CTTAACACAGATATCTTGTG+AGG + chr1_2:14689148-14689167 None:intergenic 35.0%
CACAAGATATCTGTGTTAAG+TGG - chr1_2:14689148-14689167 Msa0058360:three_prime_UTR 35.0%
! ATTTTATGGGTGGAGCATAA+TGG + chr1_2:14689353-14689372 None:intergenic 35.0%
! TGTCGATTGCTTGTTGAATT+AGG + chr1_2:14689399-14689418 None:intergenic 35.0%
AAGTACACAGTGTGATAACA+AGG - chr1_2:14689427-14689446 Msa0058360:three_prime_UTR 35.0%
GTATATAACAGACTTGGCAT+TGG - chr1_2:14689614-14689633 Msa0058360:three_prime_UTR 35.0%
!! GAAATGACTTTGAAACTGGT+CGG - chr1_2:14689759-14689778 Msa0058360:three_prime_UTR 35.0%
ATCCTCGGAATTCACTTAAT+AGG + chr1_2:14689992-14690011 None:intergenic 35.0%
TGATTGCTACTAGAGGATTA+AGG - chr1_2:14690013-14690032 Msa0058360:three_prime_UTR 35.0%
! TCCTAAGTTTTTGTGAAGCA+GGG - chr1_2:14690049-14690068 Msa0058360:three_prime_UTR 35.0%
!!! GATGTTTTATTGGAGGTACT+TGG - chr1_2:14690082-14690101 Msa0058360:three_prime_UTR 35.0%
AAAACATACATATACGACCC+TGG + chr1_2:14690306-14690325 None:intergenic 35.0%
! TTTTCCTGCCCTTTTTCTAT+TGG - chr1_2:14690322-14690341 Msa0058360:three_prime_UTR 35.0%
! TTAAACGATTTTGGGCTATG+GGG - chr1_2:14690453-14690472 Msa0058360:intron 35.0%
AAAAACATCCACCAATAGTC+TGG + chr1_2:14690527-14690546 None:intergenic 35.0%
CCTCCACAAAAACATTAACA+TGG + chr1_2:14690617-14690636 None:intergenic 35.0%
!! CCATGTTAATGTTTTTGTGG+AGG - chr1_2:14690614-14690633 Msa0058360:CDS 35.0%
! GTTTTTGTGGAGGTTAGATT+TGG - chr1_2:14690624-14690643 Msa0058360:CDS 35.0%
!! TAGGAAAATAAGGTCGGTTT+TGG + chr1_2:14690795-14690814 None:intergenic 35.0%
!!! AAAACCGACCTTATTTTCCT+AGG - chr1_2:14690794-14690813 Msa0058360:intron 35.0%
CATTTCAGCCTAGGAAAATA+AGG + chr1_2:14690805-14690824 None:intergenic 35.0%
GAAATGAAAAGACCTGTCAT+TGG - chr1_2:14690819-14690838 Msa0058360:intron 35.0%
! AATCTCTTTTCCATTGCTGT+TGG - chr1_2:14690935-14690954 Msa0058360:intron 35.0%
TATGAAATCACCAACAGCAA+TGG + chr1_2:14690948-14690967 None:intergenic 35.0%
TAAATTAGAGGGGGATATGA+AGG + chr1_2:14690972-14690991 None:intergenic 35.0%
!!! TCAATGGTGCTACCATTTTA+AGG + chr1_2:14691330-14691349 None:intergenic 35.0%
CAAACAGACAAGAATCTCAA+TGG + chr1_2:14691346-14691365 None:intergenic 35.0%
ATAGCTCCTAGATTCACTTT+CGG + chr1_2:14691450-14691469 None:intergenic 35.0%
!! AGGAGCTATAATTTGCTTCA+TGG - chr1_2:14691461-14691480 Msa0058360:intron 35.0%
TCTCCCATACAATGTAGTTT+GGG + chr1_2:14692140-14692159 None:intergenic 35.0%
ATCTCCCATACAATGTAGTT+TGG + chr1_2:14692141-14692160 None:intergenic 35.0%
AACTACATTGTATGGGAGAT+TGG - chr1_2:14692141-14692160 Msa0058360:intron 35.0%
GTGTTTAAAAGTAAGTCCGT+AGG - chr1_2:14692275-14692294 Msa0058360:intron 35.0%
TTTCTATAGCATACAGGGAT+TGG - chr1_2:14692408-14692427 Msa0058360:intron 35.0%
!!! GTTTTTTAGGTCAAGCTGAA+TGG - chr1_2:14692537-14692556 Msa0058360:intron 35.0%
GGAATTTCATATGTCTCAGA+TGG + chr1_2:14692567-14692586 None:intergenic 35.0%
TTTGCATCAGGATTCAATAG+CGG + chr1_2:14692654-14692673 None:intergenic 35.0%
! TTTGAAACTCTCTTTGCATC+AGG + chr1_2:14692666-14692685 None:intergenic 35.0%
CTGTGGATTTATATGAAGGA+AGG + chr1_2:14692751-14692770 None:intergenic 35.0%
CTTCCTTCATATAAATCCAC+AGG - chr1_2:14692749-14692768 Msa0058360:intron 35.0%
TTCCCTGTGGATTTATATGA+AGG + chr1_2:14692755-14692774 None:intergenic 35.0%
TTACTTGAATTTCTTCCCTG+TGG + chr1_2:14692768-14692787 None:intergenic 35.0%
ATAGTTTGAGTATGAACGTG+TGG - chr1_2:14692880-14692899 Msa0058360:intron 35.0%
TAGTTTGAGTATGAACGTGT+GGG - chr1_2:14692881-14692900 Msa0058360:intron 35.0%
CATTATTGGAAAAAGGGAAG+GGG - chr1_2:14693102-14693121 Msa0058360:intron 35.0%
ATTATTGGAAAAAGGGAAGG+GGG - chr1_2:14693103-14693122 Msa0058360:intron 35.0%
! AATAAACAGCTGGGATTAGT+TGG + chr1_2:14693321-14693340 None:intergenic 35.0%
TATGGGGAAAATAAACAGCT+GGG + chr1_2:14693330-14693349 None:intergenic 35.0%
TTATGGGGAAAATAAACAGC+TGG + chr1_2:14693331-14693350 None:intergenic 35.0%
AATTAGGCGAAGGTAAGAAA+TGG + chr1_2:14693380-14693399 None:intergenic 35.0%
TGAAAATTGGAGAGAAATGG+TGG + chr1_2:14693431-14693450 None:intergenic 35.0%
GAGTGAAAATTGGAGAGAAA+TGG + chr1_2:14693434-14693453 None:intergenic 35.0%
!!! GATTCCGTTGTTTTGTTTGT+AGG - chr1_2:14693580-14693599 Msa0058360:intron 35.0%
GAGACCTACAAACAAAACAA+CGG + chr1_2:14693587-14693606 None:intergenic 35.0%
!! ATGATCGTTTTTCCATGTGT+TGG - chr1_2:14693628-14693647 Msa0058360:intron 35.0%
TCGAATTCAATTGGTGAGAT+CGG - chr1_2:14693763-14693782 Msa0058360:intron 35.0%
!! TTTTTGATTGAGAGAGAGAG+AGG - chr1_2:14693789-14693808 Msa0058360:intron 35.0%
! TGCCGATTGATTGTTGAATT+AGG + chr1_2:14694101-14694120 None:intergenic 35.0%
TGAAAAATTGCACAACACAG+TGG + chr1_2:14694165-14694184 None:intergenic 35.0%
TAAATATGATATGTGGACGG+AGG - chr1_2:14694496-14694515 Msa0058360:intron 35.0%
AATCATTTATCTTGCCGAAG+AGG - chr1_2:14694928-14694947 Msa0058360:intron 35.0%
TATACGTATCACAGTTCAAG+TGG + chr1_2:14695016-14695035 None:intergenic 35.0%
GTCTGTTATAAGCTGTTTGT+TGG - chr1_2:14695178-14695197 Msa0058360:CDS 35.0%
! CTGTTTGTTGGACTTGTAAT+TGG - chr1_2:14695190-14695209 Msa0058360:intron 35.0%
ACTTGTAATTGGGTTTCCTT+TGG - chr1_2:14688479-14688498 Msa0058360:intron 35.0%
TCCATTTGTATAAGATGCCA+AGG - chr1_2:14695247-14695266 Msa0058360:intron 35.0%
TCCTTGGCATCTTATACAAA+TGG + chr1_2:14695251-14695270 None:intergenic 35.0%
! AGTTCATTCGATGCTTTTGT+TGG - chr1_2:14695492-14695511 Msa0058360:five_prime_UTR 35.0%
ACTCTCTTTGCAGAATTTGT+TGG - chr1_2:14695592-14695611 Msa0058360:five_prime_UTR 35.0%
! CACAAGGTATCTGTGTTAAA+TGG - chr1_2:14688966-14688985 Msa0058360:three_prime_UTR 35.0%
GGAGCATAATAGTAGAGTAA+AGG + chr1_2:14696103-14696122 None:intergenic 35.0%
! TGTCGATTGCTTGTTGAATT+AGG + chr1_2:14689399-14689418 None:intergenic 35.0%
! TGCGGATTGCTTGTTGAATT+AGG + chr1_2:14687876-14687895 None:intergenic 40.0%
CACAAACACTGAAACACCTA+TGG - chr1_2:14687964-14687983 Msa0058360:three_prime_UTR 40.0%
ATGCTATAACGCCACAATAG+TGG + chr1_2:14688162-14688181 None:intergenic 40.0%
AATTCGACTGTGCAGATTCA+TGG + chr1_2:14688250-14688269 None:intergenic 40.0%
ATGAATCTGCACAGTCGAAT+TGG - chr1_2:14688249-14688268 Msa0058360:three_prime_UTR 40.0%
TGTCAACATGAAATGGCAGT+TGG - chr1_2:14688411-14688430 Msa0058360:three_prime_UTR 40.0%
GTCAACATGAAATGGCAGTT+GGG - chr1_2:14688412-14688431 Msa0058360:three_prime_UTR 40.0%
TAAGCTCTATGGCACCTTAT+TGG + chr1_2:14688529-14688548 None:intergenic 40.0%
TCTTCAGGAAGTAAGCTCTA+TGG + chr1_2:14688540-14688559 None:intergenic 40.0%
TACAACAATCTGCACTCTTC+AGG + chr1_2:14688555-14688574 None:intergenic 40.0%
TCTCTGCTTCAGAAAACTGT+AGG + chr1_2:14688732-14688751 None:intergenic 40.0%
!!! ACAGTTTTCTGAAGCAGAGA+AGG - chr1_2:14688732-14688751 Msa0058360:three_prime_UTR 40.0%
CTTTATCAAATGCCATGAGC+CGG + chr1_2:14688809-14688828 None:intergenic 40.0%
!! CTCTTTGCAGAATTTGTTGG+CGG - chr1_2:14688853-14688872 Msa0058360:three_prime_UTR 40.0%
AAATGGATCTTTGCCATGTC+AGG - chr1_2:14688983-14689002 Msa0058360:three_prime_UTR 40.0%
! AAGTGGATCTTTGCTATGTC+AGG - chr1_2:14689165-14689184 Msa0058360:three_prime_UTR 40.0%
!!! TTTGTTTTGAGAGGGGAGAT+AGG - chr1_2:14689235-14689254 Msa0058360:three_prime_UTR 40.0%
! GGGACATTTTCTTTTATCCC+CGG - chr1_2:14689262-14689281 Msa0058360:three_prime_UTR 40.0%
ACAACAAGACACAACAGAGA+GGG + chr1_2:14689296-14689315 None:intergenic 40.0%
AACAACAAGACACAACAGAG+AGG + chr1_2:14689297-14689316 None:intergenic 40.0%
GCTCCACCCATAAAATTACA+AGG - chr1_2:14689357-14689376 Msa0058360:three_prime_UTR 40.0%
CAGTGTGATAACAAGGTACA+TGG - chr1_2:14689434-14689453 Msa0058360:three_prime_UTR 40.0%
TCAGAGTTTAATTGCAGCCA+TGG + chr1_2:14689543-14689562 None:intergenic 40.0%
TCATCCAAATTAAGCGACTG+AGG - chr1_2:14689638-14689657 Msa0058360:three_prime_UTR 40.0%
! AAGTGCCAGTTGTTTGAAAC+CGG - chr1_2:14689801-14689820 Msa0058360:three_prime_UTR 40.0%
TGCTAGTTGGACTTGTGATT+GGG - chr1_2:14689850-14689869 Msa0058360:three_prime_UTR 40.0%
! TGTGATTGGGCTTTTTGTGA+TGG - chr1_2:14689863-14689882 Msa0058360:three_prime_UTR 40.0%
! GTGATTGGGCTTTTTGTGAT+GGG - chr1_2:14689864-14689883 Msa0058360:three_prime_UTR 40.0%
AGTTGTGCAGTTTGTACTAC+TGG - chr1_2:14689940-14689959 Msa0058360:three_prime_UTR 40.0%
GTCCTATTAAGTGAATTCCG+AGG - chr1_2:14689987-14690006 Msa0058360:three_prime_UTR 40.0%
TCTAGTAGCAATCAGATCCT+CGG + chr1_2:14690007-14690026 None:intergenic 40.0%
! GTCCTAAGTTTTTGTGAAGC+AGG - chr1_2:14690048-14690067 Msa0058360:three_prime_UTR 40.0%
TCCCTGCTTCACAAAAACTT+AGG + chr1_2:14690053-14690072 None:intergenic 40.0%
! TAAGTTTTTGTGAAGCAGGG+AGG - chr1_2:14690052-14690071 Msa0058360:three_prime_UTR 40.0%
! AAGTTTTTGTGAAGCAGGGA+GGG - chr1_2:14690053-14690072 Msa0058360:three_prime_UTR 40.0%
GGCTTGATAGAAACACTAGT+AGG + chr1_2:14690132-14690151 None:intergenic 40.0%
ATGACCAATAGAAAAAGGGC+AGG + chr1_2:14690329-14690348 None:intergenic 40.0%
! TGCCCTTTTTCTATTGGTCA+TGG - chr1_2:14690328-14690347 Msa0058360:three_prime_UTR 40.0%
!! CTAGGTTGTAATTTGCTCGA+AGG - chr1_2:14690385-14690404 Msa0058360:three_prime_UTR 40.0%
GAGATATTCCAGACTATTGG+TGG - chr1_2:14690516-14690535 Msa0058360:intron 40.0%
!! GGTGGATGTTTTTATAGCCT+TGG - chr1_2:14690534-14690553 Msa0058360:intron 40.0%
GTTCTCAGCAATAATGACCA+AGG + chr1_2:14690554-14690573 None:intergenic 40.0%
GGTCATTATTGCTGAGAACA+AGG - chr1_2:14690555-14690574 Msa0058360:CDS 40.0%
TCAGCCTAGGAAAATAAGGT+CGG + chr1_2:14690801-14690820 None:intergenic 40.0%
! AGGTCTTTTCATTTCAGCCT+AGG + chr1_2:14690814-14690833 None:intergenic 40.0%
TATAAACGACCCCTTTAACC+CGG + chr1_2:14690901-14690920 None:intergenic 40.0%
!! AGGAAAATTTTGGCCCCTTT+AGG - chr1_2:14691200-14691219 Msa0058360:intron 40.0%
TATTTAACCCTCTGGTCTGA+TGG - chr1_2:14692088-14692107 Msa0058360:intron 40.0%
ATGGATCCATATGCTCATAC+TGG - chr1_2:14692107-14692126 Msa0058360:intron 40.0%
CTCATTCCAGTATGAGCATA+TGG + chr1_2:14692116-14692135 None:intergenic 40.0%
AGCCCCAAACTACATTGTAT+GGG - chr1_2:14692134-14692153 Msa0058360:intron 40.0%
CTCCCATACAATGTAGTTTG+GGG + chr1_2:14692139-14692158 None:intergenic 40.0%
TACATTGTATGGGAGATTGG+TGG - chr1_2:14692144-14692163 Msa0058360:intron 40.0%
AGCACTCATCTTCATATGTC+TGG - chr1_2:14692212-14692231 Msa0058360:intron 40.0%
ATGTCTGGTAAATCAAGTCG+TGG - chr1_2:14692227-14692246 Msa0058360:intron 40.0%
AGCACACTTTGGACATCATT+AGG + chr1_2:14693005-14693024 None:intergenic 40.0%
TTATTGGAAAAAGGGAAGGG+GGG - chr1_2:14693104-14693123 Msa0058360:intron 40.0%
! AATTGCTGCTTCCTACCAAT+GGG + chr1_2:14693145-14693164 None:intergenic 40.0%
! AAATTGCTGCTTCCTACCAA+TGG + chr1_2:14693146-14693165 None:intergenic 40.0%
TAGGCGGTGTAAACAAAAGA+AGG + chr1_2:14693269-14693288 None:intergenic 40.0%
!! CTGGGATTAGTTGGTATCAA+CGG + chr1_2:14693312-14693331 None:intergenic 40.0%
TATGTTTCACGCGGCAAATT+AGG + chr1_2:14693396-14693415 None:intergenic 40.0%
TTCACTCCTAGTTTCATCCA+TGG - chr1_2:14693447-14693466 Msa0058360:intron 40.0%
GAAGATCCATGGATGAAACT+AGG + chr1_2:14693456-14693475 None:intergenic 40.0%
TAACTAACCTTCTTCGCTTC+AGG + chr1_2:14693504-14693523 None:intergenic 40.0%
TTCAAGTCGATGCATCTAAG+AGG + chr1_2:14693548-14693567 None:intergenic 40.0%
!!! GTTTTGTTTGTAGGTCTCAG+TGG - chr1_2:14693589-14693608 Msa0058360:intron 40.0%
CTATCAGTATCTCCAACACA+TGG + chr1_2:14693643-14693662 None:intergenic 40.0%
CATGTGTTGGAGATACTGAT+AGG - chr1_2:14693641-14693660 Msa0058360:intron 40.0%
AGTATGAAGAACAGACACAC+CGG - chr1_2:14694227-14694246 Msa0058360:intron 40.0%
! GGTCTTATAAATAGGGACAG+AGG + chr1_2:14694339-14694358 None:intergenic 40.0%
TAGTCAAATAGCCGCTATTG+TGG - chr1_2:14694799-14694818 Msa0058360:intron 40.0%
ATGCTATAACGCCACAATAG+CGG + chr1_2:14688162-14688181 None:intergenic 40.0%
TTGAATCTGCACAGTCGAAT+TGG - chr1_2:14694900-14694919 Msa0058360:intron 40.0%
CAATAAGTTAGCTGCCTCTT+CGG + chr1_2:14694945-14694964 None:intergenic 40.0%
ACAACCGTGTAGATATGTAC+TGG + chr1_2:14695076-14695095 None:intergenic 40.0%
TCTCTGCTTCAGAAAACTGT+CGG + chr1_2:14688732-14688751 None:intergenic 40.0%
! TCATTCGATGCTTTTGTTGG+AGG - chr1_2:14695495-14695514 Msa0058360:five_prime_UTR 40.0%
!! GATGCTTTTGTTGGAGGTAT+AGG - chr1_2:14695501-14695520 Msa0058360:five_prime_UTR 40.0%
!! CTCTTTGCAGAATTTGTTGG+CGG - chr1_2:14688853-14688872 Msa0058360:three_prime_UTR 40.0%
AAATGGATCTTTGCCATGTC+AGG - chr1_2:14688983-14689002 Msa0058360:three_prime_UTR 40.0%
!!! TTTGTTTTGAGAGGGGAGAT+AGG - chr1_2:14689235-14689254 Msa0058360:three_prime_UTR 40.0%
GCTCCACACATAAAATCACA+AGG - chr1_2:14696118-14696137 Msa0058360:five_prime_UTR 40.0%
! TTGTTCTAAACAGCGGATCC+TGG + chr1_2:14688126-14688145 None:intergenic 45.0%
!! TTTGTTGGCTCATGACCACT+TGG - chr1_2:14688276-14688295 Msa0058360:three_prime_UTR 45.0%
! AAATGGCAGTTGGGAAGTAC+TGG - chr1_2:14688421-14688440 Msa0058360:three_prime_UTR 45.0%
TTGGGTTTCCTTTGGATGTG+TGG - chr1_2:14688487-14688506 Msa0058360:intron 45.0%
! ATATCAAGCATTGTGCGACC+TGG - chr1_2:14688626-14688645 Msa0058360:three_prime_UTR 45.0%
TTCATCCTCTAGCAGCAATC+AGG + chr1_2:14688681-14688700 None:intergenic 45.0%
TGATTGCTGCTAGAGGATGA+AGG - chr1_2:14688680-14688699 Msa0058360:three_prime_UTR 45.0%
TGCTAGAGGATGAAGGTTTC+AGG - chr1_2:14688687-14688706 Msa0058360:three_prime_UTR 45.0%
GCTAGAGGATGAAGGTTTCA+GGG - chr1_2:14688688-14688707 Msa0058360:three_prime_UTR 45.0%
ATTGGTGAGATCAGAAGTCG+TGG - chr1_2:14689079-14689098 Msa0058360:three_prime_UTR 45.0%
TTTGAGAGGGGAGATAGGTT+TGG - chr1_2:14689240-14689259 Msa0058360:three_prime_UTR 45.0%
TTGAGAGGGGAGATAGGTTT+GGG - chr1_2:14689241-14689260 Msa0058360:three_prime_UTR 45.0%
GCTTCCTCAGTCGCTTAATT+TGG + chr1_2:14689645-14689664 None:intergenic 45.0%
! AGTGCCAGTTGTTTGAAACC+GGG - chr1_2:14689802-14689821 Msa0058360:three_prime_UTR 45.0%
GTGCTAGTTGGACTTGTGAT+TGG - chr1_2:14689849-14689868 Msa0058360:three_prime_UTR 45.0%
GTGCAGTTTGTACTACTGGT+CGG - chr1_2:14689944-14689963 Msa0058360:three_prime_UTR 45.0%
GACGCATGCGAAGTATGAAA+AGG + chr1_2:14689970-14689989 None:intergenic 45.0%
GAGGATCTGATTGCTACTAG+AGG - chr1_2:14690006-14690025 Msa0058360:three_prime_UTR 45.0%
ATAAACGACCCCTTTAACCC+GGG + chr1_2:14690900-14690919 None:intergenic 45.0%
CCTCAATTGCTGCTATTCTG+AGG + chr1_2:14691419-14691438 None:intergenic 45.0%
CCTCAGAATAGCAGCAATTG+AGG - chr1_2:14691416-14691435 Msa0058360:intron 45.0%
CATGCACCGAAAGTGAATCT+AGG - chr1_2:14691441-14691460 Msa0058360:intron 45.0%
CTGATATTTACTGGAGCCCT+GGG + chr1_2:14691890-14691909 None:intergenic 45.0%
TCTGATATTTACTGGAGCCC+TGG + chr1_2:14691891-14691910 None:intergenic 45.0%
GGGCTCCAGTAAATATCAGA+TGG - chr1_2:14691891-14691910 Msa0058360:intron 45.0%
GGCTGCCATCTGATATTTAC+TGG + chr1_2:14691899-14691918 None:intergenic 45.0%
TATGGATCCATCAGACCAGA+GGG + chr1_2:14692098-14692117 None:intergenic 45.0%
ATATGGATCCATCAGACCAG+AGG + chr1_2:14692099-14692118 None:intergenic 45.0%
GAGCCCCAAACTACATTGTA+TGG - chr1_2:14692133-14692152 Msa0058360:intron 45.0%
GATTGACAAAAGTCGGATCC+AGG + chr1_2:14692180-14692199 None:intergenic 45.0%
ATCAAGTCGTGGTAGCACAT+TGG - chr1_2:14692238-14692257 Msa0058360:intron 45.0%
CACATTGGAAAGGCCTAGAT+CGG - chr1_2:14692253-14692272 Msa0058360:intron 45.0%
TGATGTCCAAAGTGTGCTTC+AGG - chr1_2:14693007-14693026 Msa0058360:intron 45.0%
TGAACACCTGAAGCACACTT+TGG + chr1_2:14693016-14693035 None:intergenic 45.0%
ATCGAGATCTCGAAGATCCA+TGG + chr1_2:14693467-14693486 None:intergenic 45.0%
GAATGGATCTTTGCCAAGTC+AGG - chr1_2:14693846-14693865 Msa0058360:intron 45.0%
TTGAGAGGGAAGAGAGAGAT+AGG - chr1_2:14693922-14693941 Msa0058360:intron 45.0%
AGGGAAGAGAGAGATAGGTT+TGG - chr1_2:14693927-14693946 Msa0058360:intron 45.0%
GGGAAGAGAGAGATAGGTTT+GGG - chr1_2:14693928-14693947 Msa0058360:intron 45.0%
GGAAGAGAGAGATAGGTTTG+GGG - chr1_2:14693929-14693948 Msa0058360:intron 45.0%
ACAGAGGGAAAGATAGAGAG+AGG + chr1_2:14693972-14693991 None:intergenic 45.0%
GTGATGCGTGCACTATTACA+AGG - chr1_2:14694059-14694078 Msa0058360:intron 45.0%
AATCAATCGGCAACACGTTG+AGG - chr1_2:14694109-14694128 Msa0058360:intron 45.0%
!! ATCACAAGTGTTGGTGTCAG+TGG - chr1_2:14694276-14694295 Msa0058360:intron 45.0%
TGTAGTGACCCTTCTGATAG+AGG + chr1_2:14694302-14694321 None:intergenic 45.0%
GTGTCAAATAGCGGCTATTG+TGG - chr1_2:14694710-14694729 Msa0058360:intron 45.0%
GAGTTGTCAGTTGCAGATAG+AGG + chr1_2:14694864-14694883 None:intergenic 45.0%
CGAAGAGGCAGCTAACTTAT+TGG - chr1_2:14694943-14694962 Msa0058360:intron 45.0%
TCACAGTTCAAGTGGTCATG+AGG + chr1_2:14695008-14695027 None:intergenic 45.0%
TGCCTACATGAAATGTCAGC+TGG - chr1_2:14695133-14695152 Msa0058360:CDS 45.0%
GTCCAGCTGACATTTCATGT+AGG + chr1_2:14695138-14695157 None:intergenic 45.0%
AAATGTCAGCTGGACAGTAC+TGG - chr1_2:14695143-14695162 Msa0058360:CDS 45.0%
!! GGACAGTACTGGTTGACATT+TGG - chr1_2:14695154-14695173 Msa0058360:CDS 45.0%
TTGGGTTTCCTTTGGATGTG+TGG - chr1_2:14688487-14688506 Msa0058360:intron 45.0%
TCTTCAGCTAGTAAGCTCCT+TGG + chr1_2:14695267-14695286 None:intergenic 45.0%
AGCTTACTAGCTGAAGAGTG+CGG - chr1_2:14695270-14695289 Msa0058360:intron 45.0%
TTCATCCACTAGCAGCAATC+AGG + chr1_2:14695421-14695440 None:intergenic 45.0%
! TGATTGCTGCTAGTGGATGA+AGG - chr1_2:14695420-14695439 Msa0058360:five_prime_UTR 45.0%
! TGCTAGTGGATGAAGGTTTC+AGG - chr1_2:14695427-14695446 Msa0058360:five_prime_UTR 45.0%
CTCTGCTTCAGAAAACTGTC+GGG + chr1_2:14695471-14695490 None:intergenic 45.0%
TCCCAAATGACAGTTACAGC+TGG - chr1_2:14695529-14695548 Msa0058360:five_prime_UTR 45.0%
! GCCAGCTGTAACTGTCATTT+GGG + chr1_2:14695533-14695552 None:intergenic 45.0%
AGCCAGCTGTAACTGTCATT+TGG + chr1_2:14695534-14695553 None:intergenic 45.0%
TTTGAGAGGGGAGATAGGTT+TGG - chr1_2:14689240-14689259 Msa0058360:three_prime_UTR 45.0%
TTGAGAGGGGAGATAGGTTT+GGG - chr1_2:14689241-14689260 Msa0058360:three_prime_UTR 45.0%
!!! AATTTTTTTTTTTTTTTTAG+GGG - chr1_2:14691793-14691812 Msa0058360:intron 5.0%
AAGCAATCCGCAACACATCG+AGG - chr1_2:14687884-14687903 Msa0058360:three_prime_UTR 50.0%
ATCCGCAACACATCGAGGTA+TGG - chr1_2:14687889-14687908 Msa0058360:three_prime_UTR 50.0%
AGCCATACCTCGATGTGTTG+CGG + chr1_2:14687894-14687913 None:intergenic 50.0%
GAAGACCTGATTGCTGCTAG+AGG - chr1_2:14688673-14688692 Msa0058360:three_prime_UTR 50.0%
CATCCCGAATGAGTTACAGC+CGG - chr1_2:14688787-14688806 Msa0058360:three_prime_UTR 50.0%
TGAGCCGGCTGTAACTCATT+CGG + chr1_2:14688794-14688813 None:intergenic 50.0%
! AATGAGTTACAGCCGGCTCA+TGG - chr1_2:14688794-14688813 Msa0058360:three_prime_UTR 50.0%
TGAGAGGGGAGATAGGTTTG+GGG - chr1_2:14689242-14689261 Msa0058360:three_prime_UTR 50.0%
AGACACAACAGAGAGGGAGA+GGG + chr1_2:14689290-14689309 None:intergenic 50.0%
AAGACACAACAGAGAGGGAG+AGG + chr1_2:14689291-14689310 None:intergenic 50.0%
TGCTAGCTGACGATTGCAGA+TGG - chr1_2:14689907-14689926 Msa0058360:three_prime_UTR 50.0%
GTCGGTAGAGTTGCATGCTT+TGG - chr1_2:14690664-14690683 Msa0058360:intron 50.0%
! TCAGGGAGTCTTGTCGATGA+CGG - chr1_2:14690866-14690885 Msa0058360:intron 50.0%
TAAACGACCCCTTTAACCCG+GGG + chr1_2:14690899-14690918 None:intergenic 50.0%
ATACTTAGCAGCCAGTTCCC+AGG - chr1_2:14691870-14691889 Msa0058360:intron 50.0%
TACTTAGCAGCCAGTTCCCA+GGG - chr1_2:14691871-14691890 Msa0058360:intron 50.0%
TGACAAAAGTCGGATCCAGG+TGG + chr1_2:14692177-14692196 None:intergenic 50.0%
GTCGTGGTAGCACATTGGAA+AGG - chr1_2:14692243-14692262 Msa0058360:intron 50.0%
TTCTTCGCTTCAGGATCAGG+TGG + chr1_2:14693495-14693514 None:intergenic 50.0%
ACCTGATCCTGAAGCGAAGA+AGG - chr1_2:14693494-14693513 Msa0058360:intron 50.0%
ACCTTCTTCGCTTCAGGATC+AGG + chr1_2:14693498-14693517 None:intergenic 50.0%
GAGGGAAAGATAGAGAGAGG+CGG + chr1_2:14693969-14693988 None:intergenic 50.0%
GGCAAGACACACACAACAGA+GGG + chr1_2:14693987-14694006 None:intergenic 50.0%
AGGCAAGACACACACAACAG+AGG + chr1_2:14693988-14694007 None:intergenic 50.0%
ATCGGCAACACGTTGAGGTA+TGG - chr1_2:14694114-14694133 Msa0058360:intron 50.0%
TGTCAGTGGCCTCTATCAGA+AGG - chr1_2:14694290-14694309 Msa0058360:intron 50.0%
GTCAGTGGCCTCTATCAGAA+GGG - chr1_2:14694291-14694310 Msa0058360:intron 50.0%
GAAGACCTGATTGCTGCTAG+TGG - chr1_2:14688673-14688692 Msa0058360:three_prime_UTR 50.0%
GTGGATGAAGGTTTCAGGAC+TGG - chr1_2:14695432-14695451 Msa0058360:five_prime_UTR 50.0%
! TGACAGTTACAGCTGGCTCA+TGG - chr1_2:14695536-14695555 Msa0058360:five_prime_UTR 50.0%
ATTGCCGAGATCAGAAGTCG+TGG - chr1_2:14695639-14695658 Msa0058360:five_prime_UTR 50.0%
GCATCCACGACTTCTGATCT+CGG + chr1_2:14695646-14695665 None:intergenic 50.0%
AAATGGATCTTCGCCATGCC+AGG - chr1_2:14695716-14695735 Msa0058360:five_prime_UTR 50.0%
ATTGGTGGGATCAGAAGTCG+AGG - chr1_2:14695812-14695831 Msa0058360:five_prime_UTR 50.0%
TGAGAGGGGAGATAGGTTTG+GGG - chr1_2:14689242-14689261 Msa0058360:three_prime_UTR 50.0%
ACACACGACAGAGAGGGAAA+GGG + chr1_2:14696023-14696042 None:intergenic 50.0%
GACAAGACACACGACAGAGA+GGG + chr1_2:14696029-14696048 None:intergenic 50.0%
AGACAAGACACACGACAGAG+AGG + chr1_2:14696030-14696049 None:intergenic 50.0%
!! GGCAGTTGGGAAGTACTGGT+TGG - chr1_2:14688425-14688444 Msa0058360:three_prime_UTR 55.0%
GAGGATGAAGGTTTCAGGGC+TGG - chr1_2:14688692-14688711 Msa0058360:three_prime_UTR 55.0%
GAGCCGGCTGTAACTCATTC+GGG + chr1_2:14688793-14688812 None:intergenic 55.0%
CCATGCAAGCACACCTGACA+TGG + chr1_2:14688999-14689018 None:intergenic 55.0%
CCATGTCAGGTGTGCTTGCA+TGG - chr1_2:14688996-14689015 Msa0058360:three_prime_UTR 55.0%
CTATGTCAGGTGCGCTTGCA+TGG - chr1_2:14689178-14689197 Msa0058360:three_prime_UTR 55.0%
! GCCAGTTGTTTGAAACCGGG+CGG - chr1_2:14689805-14689824 Msa0058360:three_prime_UTR 55.0%
! CAGGGAGTCTTGTCGATGAC+GGG - chr1_2:14690867-14690886 Msa0058360:intron 55.0%
GGTTGCTTCCCCGGGTTAAA+GGG - chr1_2:14690888-14690907 Msa0058360:intron 55.0%
GTTGCTTCCCCGGGTTAAAG+GGG - chr1_2:14690889-14690908 Msa0058360:intron 55.0%
TTTACTGGAGCCCTGGGAAC+TGG + chr1_2:14691884-14691903 None:intergenic 55.0%
! ATTGGTGGTTCGACTCCACC+TGG - chr1_2:14692159-14692178 Msa0058360:intron 55.0%
TCACGCGGCAAATTAGGCGA+AGG + chr1_2:14693390-14693409 None:intergenic 55.0%
! CTACCAAAGGTGTGCGTGTC+CGG + chr1_2:14694249-14694268 None:intergenic 55.0%
GACACACGACAGAGAGGGAA+AGG + chr1_2:14696024-14696043 None:intergenic 55.0%
GTCAGGTGTGCTTGCATGGC+AGG - chr1_2:14689000-14689019 Msa0058360:three_prime_UTR 60.0%
AACAGAGAGGGAGAGGGAGC+CGG + chr1_2:14689284-14689303 None:intergenic 60.0%
GCCGCCCGGTTTCAAACAAC+TGG + chr1_2:14689809-14689828 None:intergenic 60.0%
TACAACGGCTACTTGCCGCC+CGG + chr1_2:14689823-14689842 None:intergenic 60.0%
!! TCGATGACGGGTTGCTTCCC+CGG - chr1_2:14690879-14690898 Msa0058360:intron 60.0%
GGGTTGCTTCCCCGGGTTAA+AGG - chr1_2:14690887-14690906 Msa0058360:intron 60.0%
ACACCGGACACGCACACCTT+TGG - chr1_2:14694243-14694262 Msa0058360:intron 60.0%
CCATGCAAGCGCACCTGACA+TGG + chr1_2:14689181-14689200 None:intergenic 60.0%
CCATGTCAGGTGCGCTTGCA+TGG - chr1_2:14695911-14695930 Msa0058360:five_prime_UTR 60.0%
CAGAGAGGGAAAGGGAGGCA+GGG + chr1_2:14696015-14696034 None:intergenic 60.0%
ACAGAGAGGGAAAGGGAGGC+AGG + chr1_2:14696016-14696035 None:intergenic 60.0%
CACGACAGAGAGGGAAAGGG+AGG + chr1_2:14696020-14696039 None:intergenic 60.0%
GTCAGGTGCGCTTGCATGGC+AGG - chr1_2:14689182-14689201 Msa0058360:three_prime_UTR 65.0%
ACAGAGAGGGAGAGGGAGCC+GGG + chr1_2:14689283-14689302 None:intergenic 65.0%
!! CGATGACGGGTTGCTTCCCC+GGG - chr1_2:14690880-14690899 Msa0058360:intron 65.0%
CCAAGCAAGCGCGCCTGACT+TGG + chr1_2:14693862-14693881 None:intergenic 65.0%
CCAAGTCAGGCGCGCTTGCT+TGG - chr1_2:14693859-14693878 Msa0058360:intron 65.0%
CCATGCAAGCACGCCTGGCA+TGG + chr1_2:14695732-14695751 None:intergenic 65.0%
CCATGCCAGGCGTGCTTGCA+TGG - chr1_2:14695729-14695748 Msa0058360:five_prime_UTR 65.0%
ACCTGCCATGCAAGCACGCC+TGG + chr1_2:14695737-14695756 None:intergenic 65.0%
GTCAGGTGCGCTTGCATGGC+AGG - chr1_2:14689182-14689201 Msa0058360:three_prime_UTR 65.0%
CAGAGAGGGAGAGGGAGCCG+GGG + chr1_2:14689282-14689301 None:intergenic 70.0%
GCCAGGCGTGCTTGCATGGC+AGG - chr1_2:14695733-14695752 Msa0058360:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 14687866 14696195 14687866 ID=Msa0058360;Name=Msa0058360
chr1_2 mRNA 14687866 14696195 14687866 ID=Msa0058360-mRNA-1;Parent=Msa0058360;Name=Msa0058360-mRNA-1;_AED=0.25;_eAED=0.25;_QI=896|0.75|0.6|1|0.5|0.4|5|2476|71
chr1_2 exon 14687866 14688456 14687866 ID=Msa0058360-mRNA-1:exon:5993;Parent=Msa0058360-mRNA-1
chr1_2 exon 14688545 14690459 14688545 ID=Msa0058360-mRNA-1:exon:5992;Parent=Msa0058360-mRNA-1
chr1_2 exon 14690546 14690644 14690546 ID=Msa0058360-mRNA-1:exon:5991;Parent=Msa0058360-mRNA-1
chr1_2 exon 14695127 14695198 14695127 ID=Msa0058360-mRNA-1:exon:5990;Parent=Msa0058360-mRNA-1
chr1_2 exon 14695285 14696195 14695285 ID=Msa0058360-mRNA-1:exon:5989;Parent=Msa0058360-mRNA-1
chr1_2 five_prime_UTR 14695300 14696195 14695300 ID=Msa0058360-mRNA-1:five_prime_utr;Parent=Msa0058360-mRNA-1
chr1_2 CDS 14695285 14695299 14695285 ID=Msa0058360-mRNA-1:cds;Parent=Msa0058360-mRNA-1
chr1_2 CDS 14695127 14695198 14695127 ID=Msa0058360-mRNA-1:cds;Parent=Msa0058360-mRNA-1
chr1_2 CDS 14690546 14690644 14690546 ID=Msa0058360-mRNA-1:cds;Parent=Msa0058360-mRNA-1
chr1_2 CDS 14690430 14690459 14690430 ID=Msa0058360-mRNA-1:cds;Parent=Msa0058360-mRNA-1
chr1_2 three_prime_UTR 14688545 14690429 14688545 ID=Msa0058360-mRNA-1:three_prime_utr;Parent=Msa0058360-mRNA-1
chr1_2 three_prime_UTR 14687866 14688456 14687866 ID=Msa0058360-mRNA-1:three_prime_utr;Parent=Msa0058360-mRNA-1
Gene Sequence

>Msa0058360

ATGCTTTTGTTGGAGAATTTGTTGGCGGTATATGTTCGTGTGAATTTCAATTGGCGAGATAAGAAGTCATCGATGTGTGACATACATCATTATTATCACCACCATTTCTCTCCAATTTTCACTCCTAGTTTCATCCATGGATCTTCGAGATCTCGATTTCGTCCACCTGATCCTGAAGCGAAGAAGGTCTCAGTGGATCTACTGATGAATCGATGA
Protein sequence

>Msa0058360

MLLLENLLAVYVRVNFNWRDKKSSMCDIHHYYHHHFSPIFTPSFIHGSSRSRFRPPDPEAKKVSVDLLMNR*