AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1307560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1307560 MtrunA17_Chr8g0341861 98.286 175 3 0 1 175 1 175 5.07e-122 353
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 165 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACTGTTCCCCTTTC+AGG 0.122294 8_4:-3351746 None:intergenic
CAACTGTTTATTATATTTAA+TGG 0.131610 8_4:+3355557 Msa1307560:three_prime_UTR
AAGAAACAGAATTTGAAATT+TGG 0.144508 8_4:+3354715 Msa1307560:three_prime_UTR
ATATATAAATATACAATAAT+AGG 0.165485 8_4:-3355637 None:intergenic
ATTTGGCCTATTCACTATTA+TGG 0.187662 8_4:+3357434 Msa1307560:three_prime_UTR
GATTATTCAGTTACAGATTT+TGG 0.191219 8_4:+3358272 Msa1307560:three_prime_UTR
TCAGAGAGTTGTAGCTTTAA+AGG 0.193111 8_4:+3351368 Msa1307560:CDS
TAACAAAAGATTCAGATTAA+AGG 0.199333 8_4:+3354898 Msa1307560:three_prime_UTR
TGGTGATGGAAGGGTGATTT+TGG 0.207922 8_4:+3351487 Msa1307560:CDS
ACTTTGGATATGAAATTATT+TGG 0.222214 8_4:-3357732 None:intergenic
TTGACAACTTTGAAGGGTTT+TGG 0.234488 8_4:-3355306 None:intergenic
CTCCTCAAGAATAACATATT+TGG 0.237086 8_4:-3357669 None:intergenic
AGAAACAGAATTTGAAATTT+GGG 0.241265 8_4:+3354716 Msa1307560:three_prime_UTR
TCGTGTAAGATCTGCATTAT+TGG 0.248291 8_4:+3355100 Msa1307560:three_prime_UTR
ATGCTTGCTGCTGTTATGTC+TGG 0.276795 8_4:+3354753 Msa1307560:three_prime_UTR
ATTATTGTTGGGAGCGTATC+TGG 0.277369 8_4:+3354839 Msa1307560:three_prime_UTR
AGTACTATATATCTATATTT+AGG 0.287574 8_4:-3355158 None:intergenic
AGTTTCTTGCTGATGTTCTT+TGG 0.296937 8_4:+3356959 Msa1307560:three_prime_UTR
TTTACTTGGTTGAAAGGATT+TGG 0.305186 8_4:+3357417 Msa1307560:three_prime_UTR
GGTGGTGACTCGTATGATTC+GGG 0.312778 8_4:+3351764 Msa1307560:CDS
TTTCTCTTGCATTAGATCCT+TGG 0.319284 8_4:+3356885 Msa1307560:three_prime_UTR
ATGAGTACTTTGATAGTTCA+TGG 0.322932 8_4:+3356924 Msa1307560:three_prime_UTR
TTCTCTTGCATTAGATCCTT+GGG 0.329763 8_4:+3356886 Msa1307560:three_prime_UTR
ATATATCTATATTTAGGAAT+TGG 0.331421 8_4:-3355152 None:intergenic
TTTCAGAAGGGGAGGAAGAT+AGG 0.332254 8_4:-3355018 None:intergenic
TGGACGATGATTCTGTTTAT+AGG 0.334225 8_4:+3351675 Msa1307560:CDS
TATATGTTGTAGATCATAAT+AGG 0.345789 8_4:+3358316 Msa1307560:three_prime_UTR
GCGGTTGCCACAGCCATTAC+TGG 0.348920 8_4:-3356857 None:intergenic
GAGCATTGGCGTTGATGATA+TGG 0.349849 8_4:-3358226 None:intergenic
TTTCTTACCAATACAGTGAT+TGG 0.360244 8_4:+3358429 Msa1307560:three_prime_UTR
GAGGAAGAATTGAGCGGAGG+AGG 0.363180 8_4:-3354945 None:intergenic
GGTAAAAGTGGAGAACAATT+TGG 0.367119 8_4:+3355492 Msa1307560:three_prime_UTR
CAATCATGTTTCTCATTTGT+CGG 0.367185 8_4:-3355261 None:intergenic
CAGAGAGTTGTAGCTTTAAA+GGG 0.368349 8_4:+3351369 Msa1307560:CDS
TGAAATTATTTGGTCCATAT+AGG 0.374264 8_4:-3357722 None:intergenic
TGTCACCTGCATGAAGCTTC+TGG 0.376676 8_4:-3357613 None:intergenic
ACAGTTGTCCCGACTGCTCT+TGG 0.379237 8_4:+3352911 Msa1307560:three_prime_UTR
GGGGAGGAAGATAGGGTTGA+TGG 0.381322 8_4:-3355010 None:intergenic
TTCAGAAGGGGAGGAAGATA+GGG 0.386770 8_4:-3355017 None:intergenic
TGGTGGTGACTCGTATGATT+CGG 0.389772 8_4:+3351763 Msa1307560:CDS
ACTAGGCTACCTGTGAAGTA+TGG 0.393809 8_4:-3355128 None:intergenic
AAAGTTAATTGATACCAATA+TGG 0.397508 8_4:-3357222 None:intergenic
GAAGTTCAGGATCCGGTATT+CGG 0.399782 8_4:+3351417 Msa1307560:CDS
AGGAGGTAAAAGAGGGTAAG+AGG 0.400064 8_4:-3354964 None:intergenic
TTTGAGAATGTAAGGGGAGG+GGG 0.400516 8_4:-3358563 None:intergenic
GGATACAATACAAGTTTGTT+TGG 0.401116 8_4:-3358535 None:intergenic
TATATAAATATACAATAATA+GGG 0.403995 8_4:-3355636 None:intergenic
GTGGCATCTGAAAACCTATA+TGG 0.411109 8_4:+3357708 Msa1307560:three_prime_UTR
CACAATAGCAGGGGTTGTTA+AGG 0.412687 8_4:+3357190 Msa1307560:three_prime_UTR
ACAAGTTTGTTTGGTGTTGA+AGG 0.413238 8_4:-3358526 None:intergenic
GCAAACAAGAGGAGAAAGAT+TGG 0.417679 8_4:-3353167 None:intergenic
GGCCTATTCACTATTATGGT+TGG 0.420950 8_4:+3357438 Msa1307560:three_prime_UTR
TCACATTCACTTCTATGCTT+CGG 0.422056 8_4:-3355466 None:intergenic
TGCTTGCTGCTGTTATGTCT+GGG 0.429245 8_4:+3354754 Msa1307560:three_prime_UTR
CTCTGTCACATTTGCTACAA+TGG 0.434598 8_4:+3352979 Msa1307560:three_prime_UTR
TCTGTTTATAGGAGAGGTAA+TGG 0.441718 8_4:+3351686 Msa1307560:CDS
TTCTTGCTGATGTTCTTTGG+TGG 0.442105 8_4:+3356962 Msa1307560:three_prime_UTR
CTGTTATGTCTGGGTTTCGC+TGG 0.446264 8_4:+3354763 Msa1307560:three_prime_UTR
TAAGGAGGCCGTCACCATAT+TGG 0.448702 8_4:+3357208 Msa1307560:three_prime_UTR
ACCAATACAGTGATTGGTAA+TGG 0.453845 8_4:+3358435 Msa1307560:three_prime_UTR
ACTTTCATGATGCGTTTACT+TGG 0.454790 8_4:+3357403 Msa1307560:three_prime_UTR
CGAAAGCTCTCTCCGAATAC+CGG 0.456403 8_4:-3351429 None:intergenic
GCCGTCACAGTCACAATAGC+AGG 0.457610 8_4:+3357179 Msa1307560:three_prime_UTR
TTTGTGTGTGTATGTGTAGA+TGG 0.461936 8_4:-3355666 None:intergenic
GCACAACACAGTGTGCAGTT+TGG 0.466555 8_4:-3355075 None:intergenic
AAAATTACACTGTAAATGTA+AGG 0.471890 8_4:-3355368 None:intergenic
GATGCGTTTACTTGGTTGAA+AGG 0.473291 8_4:+3357411 Msa1307560:three_prime_UTR
ATTCCTGATAGTTTAAAACT+TGG 0.475966 8_4:-3353820 None:intergenic
GATAGTGGAAGTTCAGGATC+CGG 0.479106 8_4:+3351410 Msa1307560:CDS
CACCAACCATAATAGTGAAT+AGG 0.480731 8_4:-3357440 None:intergenic
TGAATGTGAAAAGGTAAAAG+TGG 0.482408 8_4:+3355480 Msa1307560:three_prime_UTR
TATATTTAGGAATTGGAACT+AGG 0.484248 8_4:-3355145 None:intergenic
AATGCATCTAAAATATTAAG+TGG 0.484373 8_4:-3358401 None:intergenic
ATGTAGGAAGGAGGTAAAAG+AGG 0.486189 8_4:-3354972 None:intergenic
GGTCAATTTCGTTGTTACAT+TGG 0.486992 8_4:+3358496 Msa1307560:three_prime_UTR
TATTGAAGACAGTCCTGAAA+GGG 0.489450 8_4:+3351733 Msa1307560:CDS
ACCATTACCAATCACTGTAT+TGG 0.491682 8_4:-3358436 None:intergenic
AGTCAAGAGATGATGTAGGA+AGG 0.500937 8_4:-3354984 None:intergenic
ACCGTGTTTGACAACTTTGA+AGG 0.502314 8_4:-3355313 None:intergenic
GAAACAGAATTTGAAATTTG+GGG 0.502876 8_4:+3354717 Msa1307560:three_prime_UTR
AATGTTCAGTTAGCGATAGC+AGG 0.503802 8_4:-3355711 None:intergenic
GATGAGTCAAGAGATGATGT+AGG 0.503818 8_4:-3354988 None:intergenic
AGATCATCATACAAAAGATT+CGG 0.504216 8_4:+3357643 Msa1307560:three_prime_UTR
GAAAGGATCGTGCCGATGAA+TGG 0.505519 8_4:+3351641 Msa1307560:CDS
ACTTCTATGCTTCGGCCTCA+AGG 0.506147 8_4:-3355458 None:intergenic
CCTGAAAGGGGAACAGTTGG+TGG 0.506734 8_4:+3351746 Msa1307560:CDS
ATATGTTATTCTTGAGGAGA+TGG 0.508928 8_4:+3357673 Msa1307560:three_prime_UTR
TTGATAAGTTTCGGAAGGAA+AGG 0.517003 8_4:+3351624 Msa1307560:CDS
GTCTTCAAGATATTTGCTAC+AGG 0.517741 8_4:-3351830 None:intergenic
ACATAGCTCATCAAGGTAAG+TGG 0.518542 8_4:-3356830 None:intergenic
GGACTGTCTTCAATATCAAA+AGG 0.520338 8_4:-3351725 None:intergenic
TTCGGCCTCAAGGTTGTAGC+CGG 0.523367 8_4:-3355448 None:intergenic
CCGTGTTTGACAACTTTGAA+GGG 0.525410 8_4:-3355312 None:intergenic
GCATAGAAGTGAATGTGAAA+AGG 0.526950 8_4:+3355471 Msa1307560:three_prime_UTR
TAAATATAGATATATAGTAC+TGG 0.527570 8_4:+3355160 Msa1307560:three_prime_UTR
ACAATAATAGGGATCGTATC+CGG 0.528668 8_4:-3355625 None:intergenic
GACTGCTCTTGGAACAGCTA+TGG 0.528783 8_4:+3352922 Msa1307560:three_prime_UTR
GCATATATAATACCTGCAAA+AGG 0.531461 8_4:-3354800 None:intergenic
CAAGAGATGATGTAGGAAGG+AGG 0.533092 8_4:-3354981 None:intergenic
GGATCAGAAATTAGGTGATG+AGG 0.534429 8_4:+3351508 Msa1307560:CDS
CAACACAGTGTGCAGTTTGG+CGG 0.540395 8_4:-3355072 None:intergenic
AATAATATAAGAAAATGAAA+AGG 0.542918 8_4:-3354822 None:intergenic
ATATGGCTAAGGCAAGTCCC+TGG 0.544792 8_4:-3358209 None:intergenic
TCCATCGGCATATTACTGAC+AGG 0.547715 8_4:+3353856 Msa1307560:three_prime_UTR
GAACAAAGCGATTAAACTGT+AGG 0.548352 8_4:-3355203 None:intergenic
TGTAGGAAGGAGGTAAAAGA+GGG 0.550336 8_4:-3354971 None:intergenic
AGCCAAATATGTTATTCTTG+AGG 0.551577 8_4:+3357667 Msa1307560:three_prime_UTR
ATTGAAAAGAAAGAATCCTA+TGG 0.555348 8_4:+3355798 Msa1307560:three_prime_UTR
AGTGGAGAACAATTTGGTGG+AGG 0.555552 8_4:+3355498 Msa1307560:three_prime_UTR
AGGAAGAATTGAGCGGAGGA+GGG 0.555907 8_4:-3354944 None:intergenic
GATGATAATGATGGTGGTGA+TGG 0.556719 8_4:+3351473 Msa1307560:CDS
GTGGAGAACAATTTGGTGGA+GGG 0.560757 8_4:+3355499 Msa1307560:three_prime_UTR
CCCTTCAAAGTTGTCAAACA+CGG 0.562020 8_4:+3355312 Msa1307560:three_prime_UTR
GCAGTCGGGACAACTGTGAA+AGG 0.567917 8_4:-3352905 None:intergenic
AAGCAATGATTTCGAAGAAG+AGG 0.568201 8_4:+3358170 Msa1307560:three_prime_UTR
AATAGCAGGGGTTGTTAAGG+AGG 0.572240 8_4:+3357193 Msa1307560:three_prime_UTR
ATCGTACTAGCACCATTCAT+CGG 0.574131 8_4:-3351653 None:intergenic
ATAATGATGGTGGTGATGGA+AGG 0.581801 8_4:+3351477 Msa1307560:CDS
ATATTGAAGACAGTCCTGAA+AGG 0.583185 8_4:+3351732 Msa1307560:CDS
TGGCGTTGATGATATGGCTA+AGG 0.583630 8_4:-3358220 None:intergenic
AGATACCAGAAGCTTCATGC+AGG 0.583657 8_4:+3357608 Msa1307560:intron
TAAGAGGAAGAATTGAGCGG+AGG 0.583756 8_4:-3354948 None:intergenic
GGTTTGAATTGGAAGGTTGG+AGG 0.584315 8_4:+3353795 Msa1307560:intron
TTGGACCGTCCATACTTCAC+AGG 0.586362 8_4:+3355119 Msa1307560:three_prime_UTR
TTGTTGATCCATAAGAAACA+AGG 0.586605 8_4:+3355335 Msa1307560:three_prime_UTR
GTTGAAAAGAATGAGGTGCA+AGG 0.586920 8_4:+3351572 Msa1307560:CDS
TAGCTGTTCCAAGAGCAGTC+GGG 0.589209 8_4:-3352919 None:intergenic
ACCTGTCAGTAATATGCCGA+TGG 0.590074 8_4:-3353857 None:intergenic
ATAGCTGTTCCAAGAGCAGT+CGG 0.592561 8_4:-3352920 None:intergenic
AGTCCTGAAAGGGGAACAGT+TGG 0.594658 8_4:+3351743 Msa1307560:CDS
TGGAGCTACATAGCTCATCA+AGG 0.595512 8_4:-3356837 None:intergenic
GATGATTCTGTTTATAGGAG+AGG 0.598444 8_4:+3351680 Msa1307560:CDS
GTGGTGACTCGTATGATTCG+GGG 0.601391 8_4:+3351765 Msa1307560:CDS
AGCAATGATTTCGAAGAAGA+GGG 0.603074 8_4:+3358171 Msa1307560:three_prime_UTR
AAAAGTGGAGAACAATTTGG+TGG 0.607879 8_4:+3355495 Msa1307560:three_prime_UTR
CCGTCACAGTCACAATAGCA+GGG 0.608410 8_4:+3357180 Msa1307560:three_prime_UTR
GGAAAGCAAAAGCAAACAAG+AGG 0.608751 8_4:-3353178 None:intergenic
GGGTAAGAGGAAGAATTGAG+CGG 0.613826 8_4:-3354951 None:intergenic
TGGTGACTCGTATGATTCGG+GGG 0.616100 8_4:+3351766 Msa1307560:CDS
GGCTACCTGTGAAGTATGGA+CGG 0.616357 8_4:-3355124 None:intergenic
AATTGATACCAATATGGTGA+CGG 0.618158 8_4:-3357216 None:intergenic
TAATGATGGTGGTGATGGAA+GGG 0.620916 8_4:+3351478 Msa1307560:CDS
GATGAATGGTGCTAGTACGA+TGG 0.623958 8_4:+3351655 Msa1307560:CDS
TGGAGAACAATTTGGTGGAG+GGG 0.626348 8_4:+3355500 Msa1307560:three_prime_UTR
TGTAGCTCCAGTAATGGCTG+TGG 0.626348 8_4:+3356850 Msa1307560:three_prime_UTR
GACAGAATAGAAGAGAGCAT+TGG 0.631652 8_4:-3358240 None:intergenic
TGTTGATCCATAAGAAACAA+GGG 0.638024 8_4:+3355336 Msa1307560:three_prime_UTR
GAGCTATGTAGCTCCAGTAA+TGG 0.650395 8_4:+3356844 Msa1307560:three_prime_UTR
ATTGAAGACAGTCCTGAAAG+GGG 0.665406 8_4:+3351734 Msa1307560:CDS
CCCTGCTATTGTGACTGTGA+CGG 0.667298 8_4:-3357180 None:intergenic
CAATAAATAAGAGTTCTCAC+CGG 0.670931 8_4:+3355606 Msa1307560:three_prime_UTR
GTTGATCCATAAGAAACAAG+GGG 0.676845 8_4:+3355337 Msa1307560:three_prime_UTR
CGTCACAGTCACAATAGCAG+GGG 0.682759 8_4:+3357181 Msa1307560:three_prime_UTR
GCTTCATGCAGGTGACAATG+TGG 0.684466 8_4:+3357619 Msa1307560:three_prime_UTR
GCTATGTTTAACGGTGACGC+CGG 0.687645 8_4:+3355429 Msa1307560:three_prime_UTR
GAGGAGATGGATGAACAAGA+TGG 0.689009 8_4:+3357686 Msa1307560:three_prime_UTR
TGACGCCGGCTACAACCTTG+AGG 0.693977 8_4:+3355443 Msa1307560:three_prime_UTR
TGTGACGACGATGATAATGA+TGG 0.708588 8_4:+3351464 Msa1307560:CDS
AATAATGCAGATCTTACACG+AGG 0.710389 8_4:-3355098 None:intergenic
GGTGACTCGTATGATTCGGG+GGG 0.712537 8_4:+3351767 Msa1307560:CDS
GAGATGGATGAACAAGATGG+TGG 0.719797 8_4:+3357689 Msa1307560:three_prime_UTR
TTGATCCATAAGAAACAAGG+GGG 0.726217 8_4:+3355338 Msa1307560:three_prime_UTR
GACGACGATGATAATGATGG+TGG 0.757338 8_4:+3351467 Msa1307560:CDS
TAATGCAAGAGAAAGAAGTG+CGG 0.763184 8_4:-3356876 None:intergenic
ATAATGCAGATCTTACACGA+GGG 0.785253 8_4:-3355097 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr8_4:3356044-3356063 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr8_4:3356045-3356064 None:intergenic 0.0%
!!! ATTAAACATTCTAAAATTTA+AGG + chr8_4:3353263-3353282 Msa1307560:intron 10.0%
!! AATAATATAAGAAAATGAAA+AGG - chr8_4:3354825-3354844 None:intergenic 10.0%
!!! ATATTTTATATATTCATTTG+TGG + chr8_4:3357799-3357818 Msa1307560:intron 10.0%
!!! AAATATTTTAATACAATACT+AGG - chr8_4:3358375-3358394 None:intergenic 10.0%
!! AGAAAAATAAATAAAATTTG+GGG - chr8_4:3358593-3358612 None:intergenic 10.0%
!! CAGAAAAATAAATAAAATTT+GGG - chr8_4:3358594-3358613 None:intergenic 10.0%
!!! ATATGAAATGTTTTAACAAT+AGG + chr8_4:3352723-3352742 Msa1307560:intron 15.0%
!!! TGTCATTTAATTATAAATGT+TGG + chr8_4:3353774-3353793 Msa1307560:intron 15.0%
!! TGAAATGATAAATAATACTA+TGG - chr8_4:3353904-3353923 None:intergenic 15.0%
!!! TATTTTTCTTTCCTAAATTA+AGG + chr8_4:3354056-3354075 Msa1307560:intron 15.0%
!! TTAAAATATCAACTTTACAT+CGG + chr8_4:3354161-3354180 Msa1307560:intron 15.0%
!! TTTATACTAACAAATTAGTA+TGG + chr8_4:3354428-3354447 Msa1307560:intron 15.0%
!!! TCATTTTCTTATATTATTGT+TGG + chr8_4:3354827-3354846 Msa1307560:three_prime_UTR 15.0%
!!! CATTTTCTTATATTATTGTT+GGG + chr8_4:3354828-3354847 Msa1307560:three_prime_UTR 15.0%
!! ATATATCTATATTTAGGAAT+TGG - chr8_4:3355155-3355174 None:intergenic 15.0%
!! AGTACTATATATCTATATTT+AGG - chr8_4:3355161-3355180 None:intergenic 15.0%
!! TAAATATAGATATATAGTAC+TGG + chr8_4:3355160-3355179 Msa1307560:three_prime_UTR 15.0%
!! CAACTGTTTATTATATTTAA+TGG + chr8_4:3355557-3355576 Msa1307560:three_prime_UTR 15.0%
!! AGTTTATTTATTGAAAACAT+TGG + chr8_4:3355842-3355861 Msa1307560:intron 15.0%
!! TATAATTAATGTTCGATTTA+AGG - chr8_4:3356169-3356188 None:intergenic 15.0%
!!! TCTACATTTTTTTATATGAT+TGG + chr8_4:3357252-3357271 Msa1307560:intron 15.0%
!! TAAAATCATATTAATGATGA+AGG + chr8_4:3357845-3357864 Msa1307560:intron 15.0%
!!! GATTTTCTTTTGATAAGTTT+CGG + chr8_4:3351615-3351634 Msa1307560:CDS 20.0%
!! TGGATAGTATTCATTAAAAA+GGG - chr8_4:3352264-3352283 None:intergenic 20.0%
!! AAATTTATGAGACCAAAAAT+AGG - chr8_4:3352322-3352341 None:intergenic 20.0%
!!! TGTAACTTCATAATACATTT+TGG + chr8_4:3352458-3352477 Msa1307560:intron 20.0%
!! ACAGAATTACAAATTATATG+CGG - chr8_4:3352540-3352559 None:intergenic 20.0%
!! GATTACAAAAACAAAATGAA+AGG - chr8_4:3353213-3353232 None:intergenic 20.0%
!!! AATTTCTGATATAGTCTTTT+AGG - chr8_4:3353498-3353517 None:intergenic 20.0%
!! TTCTTGAATAATCATATGTT+TGG + chr8_4:3353703-3353722 Msa1307560:intron 20.0%
!!! TTATAAATGTTGGTTTGAAT+TGG + chr8_4:3353784-3353803 Msa1307560:intron 20.0%
!!! TTTTGTAGTTTCCTTAATTT+AGG - chr8_4:3354070-3354089 None:intergenic 20.0%
!! GTCTATCAATTATAAATGAT+TGG + chr8_4:3354521-3354540 Msa1307560:intron 20.0%
!! AATTATAAATGATTGGAACA+GGG + chr8_4:3354528-3354547 Msa1307560:intron 20.0%
!!! TTAGTTTTGAATTATTGTTG+AGG - chr8_4:3354659-3354678 None:intergenic 20.0%
!!! TAATGTCTTCAAGTTTATTT+TGG + chr8_4:3354676-3354695 Msa1307560:intron 20.0%
!!! AAGAAACAGAATTTGAAATT+TGG + chr8_4:3354715-3354734 Msa1307560:three_prime_UTR 20.0%
!!! AGAAACAGAATTTGAAATTT+GGG + chr8_4:3354716-3354735 Msa1307560:three_prime_UTR 20.0%
!! TAACAAAAGATTCAGATTAA+AGG + chr8_4:3354898-3354917 Msa1307560:three_prime_UTR 20.0%
!! AAAATTACACTGTAAATGTA+AGG - chr8_4:3355371-3355390 None:intergenic 20.0%
!!! TATTTAATTTTTACCAGTCA+TGG + chr8_4:3356195-3356214 Msa1307560:intron 20.0%
!!! TATTGACAATGATTTCTTTT+CGG - chr8_4:3356285-3356304 None:intergenic 20.0%
!!! TCTACAATATTTTTCACATT+AGG - chr8_4:3356408-3356427 None:intergenic 20.0%
!!! ATTGAACTTATAATTTTCCT+TGG - chr8_4:3356540-3356559 None:intergenic 20.0%
!! TATAAGTTCAATCATTATGA+AGG + chr8_4:3356548-3356567 Msa1307560:intron 20.0%
!! AAGTCAAATATATATATCAG+AGG - chr8_4:3357022-3357041 None:intergenic 20.0%
!! AAAGTTAATTGATACCAATA+TGG - chr8_4:3357225-3357244 None:intergenic 20.0%
!! ACTTTGGATATGAAATTATT+TGG - chr8_4:3357735-3357754 None:intergenic 20.0%
!! ATTTAACTGTATCAAAGAAA+AGG - chr8_4:3357761-3357780 None:intergenic 20.0%
!!! TTTTCTTTGATACAGTTAAA+TGG + chr8_4:3357760-3357779 Msa1307560:intron 20.0%
!!! ATTATTTGAGACATGAATAT+TGG + chr8_4:3358013-3358032 Msa1307560:intron 20.0%
!! TATATGTTGTAGATCATAAT+AGG + chr8_4:3358316-3358335 Msa1307560:three_prime_UTR 20.0%
!!! AATGCATCTAAAATATTAAG+TGG - chr8_4:3358404-3358423 None:intergenic 20.0%
!!! TTACTCAACAACTATATTTT+TGG + chr8_4:3358458-3358477 Msa1307560:three_prime_UTR 20.0%
!!! TACTCAACAACTATATTTTT+GGG + chr8_4:3358459-3358478 Msa1307560:three_prime_UTR 20.0%
!! CTATGTTTTTCATATTTGTG+TGG + chr8_4:3351852-3351871 Msa1307560:CDS 25.0%
!!! GTTTTAGTTGGCATTTATAT+TGG + chr8_4:3351925-3351944 Msa1307560:intron 25.0%
!!! GAGTTTAATTTTGATACACT+CGG + chr8_4:3351947-3351966 Msa1307560:intron 25.0%
! TGATGTTTACGATTTATTGA+TGG + chr8_4:3352066-3352085 Msa1307560:intron 25.0%
! ATCACAAACAACACTAAAAA+GGG - chr8_4:3352147-3352166 None:intergenic 25.0%
!!! ATCGTTATATGTTTTGAAAC+AGG + chr8_4:3352193-3352212 Msa1307560:intron 25.0%
! AGGTATAATAAAAGTCTGTT+GGG + chr8_4:3352213-3352232 Msa1307560:intron 25.0%
! GTGGATAGTATTCATTAAAA+AGG - chr8_4:3352265-3352284 None:intergenic 25.0%
!! CGAAATTTATCACCTATTTT+TGG + chr8_4:3352307-3352326 Msa1307560:intron 25.0%
!!! TGGTATTCTATGTTTTAACT+TGG + chr8_4:3352399-3352418 Msa1307560:intron 25.0%
!! GCATATAATTTGTAATTCTG+TGG + chr8_4:3352539-3352558 Msa1307560:intron 25.0%
! ATTAAGATTCTAATGTTACG+TGG + chr8_4:3352612-3352631 Msa1307560:intron 25.0%
!! CATTTCATATCGCTAAATTT+TGG - chr8_4:3352713-3352732 None:intergenic 25.0%
!!! TGTTTTAACAATAGGTTGAT+TGG + chr8_4:3352731-3352750 Msa1307560:intron 25.0%
!! GTTAGTTGTTTCCTTAAAAA+TGG - chr8_4:3353091-3353110 None:intergenic 25.0%
! AAAGGAAAGGTAAATAAAGA+GGG - chr8_4:3353122-3353141 None:intergenic 25.0%
! AAAAGGAAAGGTAAATAAAG+AGG - chr8_4:3353123-3353142 None:intergenic 25.0%
! GATTTACACTGCAAAATAAA+AGG - chr8_4:3353140-3353159 None:intergenic 25.0%
!! ATTCCTGATAGTTTAAAACT+TGG - chr8_4:3353823-3353842 None:intergenic 25.0%
! TAACTTTCTTACTACTGTAA+GGG - chr8_4:3354243-3354262 None:intergenic 25.0%
! ATAACTTTCTTACTACTGTA+AGG - chr8_4:3354244-3354263 None:intergenic 25.0%
! CAATTATAAATGATTGGAAC+AGG + chr8_4:3354527-3354546 Msa1307560:intron 25.0%
!! GAAACAGAATTTGAAATTTG+GGG + chr8_4:3354717-3354736 Msa1307560:three_prime_UTR 25.0%
!!! ATTCAGATTAAAGGTTTTGT+TGG + chr8_4:3354907-3354926 Msa1307560:three_prime_UTR 25.0%
!!! ACAATTTGCATTTTTCAGAA+GGG - chr8_4:3355033-3355052 None:intergenic 25.0%
! TATATTTAGGAATTGGAACT+AGG - chr8_4:3355148-3355167 None:intergenic 25.0%
!!! GTTTTGGGATTTTAATTTGT+TGG - chr8_4:3355293-3355312 None:intergenic 25.0%
!! AGGATTCTTTCTTTTCAATT+TGG - chr8_4:3355797-3355816 None:intergenic 25.0%
! ATTGAAAAGAAAGAATCCTA+TGG + chr8_4:3355798-3355817 Msa1307560:three_prime_UTR 25.0%
! AATAAACTATTACATGTGCA+AGG - chr8_4:3355830-3355849 None:intergenic 25.0%
! GGTATTGTTAGATTTAGATT+AGG + chr8_4:3355863-3355882 Msa1307560:intron 25.0%
! AGCAAGTTATAACTAAAAAG+TGG + chr8_4:3355956-3355975 Msa1307560:intron 25.0%
! AATACTCAATATCTGTTAAG+AGG + chr8_4:3356504-3356523 Msa1307560:intron 25.0%
! TCAATCATTATGAAGGATTT+AGG + chr8_4:3356555-3356574 Msa1307560:intron 25.0%
!!! TATCAAAGTACTCATTTTCT+CGG - chr8_4:3356919-3356938 None:intergenic 25.0%
! ATAAACTCCTACCATAAAAA+AGG - chr8_4:3356996-3357015 None:intergenic 25.0%
!!! ACCTTATTTTGTTGTGTTTA+CGG + chr8_4:3357060-3357079 Msa1307560:intron 25.0%
! TTATATCTTTATCTTCTTGC+AGG + chr8_4:3357121-3357140 Msa1307560:intron 25.0%
! AGATCATCATACAAAAGATT+CGG + chr8_4:3357643-3357662 Msa1307560:three_prime_UTR 25.0%
! TGAAATTATTTGGTCCATAT+AGG - chr8_4:3357725-3357744 None:intergenic 25.0%
! AATCATATTAATGATGAAGG+CGG + chr8_4:3357848-3357867 Msa1307560:intron 25.0%
!!! TACCTTTTTTACAATTAGCA+AGG + chr8_4:3357898-3357917 Msa1307560:intron 25.0%
!!! ACCTTTTTTACAATTAGCAA+GGG + chr8_4:3357899-3357918 Msa1307560:intron 25.0%
! AATAATGAACTGATGTTACA+TGG - chr8_4:3357943-3357962 None:intergenic 25.0%
! TGAATTGATGTTACATTACA+TGG - chr8_4:3357994-3358013 None:intergenic 25.0%
!! AGTTTATTGACTGAGAATTA+TGG - chr8_4:3358094-3358113 None:intergenic 25.0%
!! GATTATTCAGTTACAGATTT+TGG + chr8_4:3358272-3358291 Msa1307560:three_prime_UTR 25.0%
!!! ACTCAACAACTATATTTTTG+GGG + chr8_4:3358460-3358479 Msa1307560:three_prime_UTR 25.0%
!!! ATATTTTTGGGGAAAAATGT+TGG + chr8_4:3358471-3358490 Msa1307560:three_prime_UTR 25.0%
!! GCTATTGATGATTTTGATAG+TGG + chr8_4:3351395-3351414 Msa1307560:CDS 30.0%
! GTGATTTTGGATCAGAAATT+AGG + chr8_4:3351500-3351519 Msa1307560:CDS 30.0%
! ACCTCATTCTTTTCAACAAA+AGG - chr8_4:3351569-3351588 None:intergenic 30.0%
! TTCTTTTGATAAGTTTCGGA+AGG + chr8_4:3351619-3351638 Msa1307560:CDS 30.0%
CAAGGTCAAAAATAAACTGA+AGG - chr8_4:3351882-3351901 None:intergenic 30.0%
!!! TTTACACTGTTGGTTTTAGT+TGG + chr8_4:3351913-3351932 Msa1307560:intron 30.0%
CATCACAAACAACACTAAAA+AGG - chr8_4:3352148-3352167 None:intergenic 30.0%
CAGGTATAATAAAAGTCTGT+TGG + chr8_4:3352212-3352231 Msa1307560:intron 30.0%
TATTCATTAAAAAGGGAGCT+GGG - chr8_4:3352257-3352276 None:intergenic 30.0%
! TTGTTACTTGTTGAGTGTTA+TGG + chr8_4:3352502-3352521 Msa1307560:intron 30.0%
!! TCGCTAAATTTTGGTGAAAA+TGG - chr8_4:3352704-3352723 None:intergenic 30.0%
GAGATAAAAACCACAGAAAA+CGG - chr8_4:3352762-3352781 None:intergenic 30.0%
!! CTACATTTGCTCCATTTTTA+AGG + chr8_4:3353077-3353096 Msa1307560:intron 30.0%
AAGGAAAGGTAAATAAAGAG+GGG - chr8_4:3353121-3353140 None:intergenic 30.0%
ACACTGCAAAATAAAAGGAA+AGG - chr8_4:3353135-3353154 None:intergenic 30.0%
TGCATTGCTAGGATAATTTA+TGG + chr8_4:3353289-3353308 Msa1307560:intron 30.0%
GCATTGCTAGGATAATTTAT+GGG + chr8_4:3353290-3353309 Msa1307560:intron 30.0%
! AAGACAATAGGTGTTCTTTT+TGG + chr8_4:3353370-3353389 Msa1307560:intron 30.0%
CTTTACAATGCAAGAAATTG+TGG + chr8_4:3353523-3353542 Msa1307560:intron 30.0%
AACACAAACTAATATTCGAG+AGG - chr8_4:3353737-3353756 None:intergenic 30.0%
!! AAATGTTGGTTTGAATTGGA+AGG + chr8_4:3353788-3353807 Msa1307560:intron 30.0%
!!! GTACCAAGTTTTAAACTATC+AGG + chr8_4:3353817-3353836 Msa1307560:three_prime_UTR 30.0%
!! ATCATTTTAGTCATCTCCAT+CGG + chr8_4:3353841-3353860 Msa1307560:three_prime_UTR 30.0%
AAATTGAAAGAACAGCATGA+TGG - chr8_4:3354139-3354158 None:intergenic 30.0%
! ATCTTAAAAAGGAGGGTTTT+TGG - chr8_4:3354204-3354223 None:intergenic 30.0%
ATAGAGGATCTTAAAAAGGA+GGG - chr8_4:3354211-3354230 None:intergenic 30.0%
TTGGATAGAGGATCTTAAAA+AGG - chr8_4:3354215-3354234 None:intergenic 30.0%
TGATTCCTGATAGGATATAA+TGG - chr8_4:3354339-3354358 None:intergenic 30.0%
TATCAAACATGATTCCTGAT+AGG - chr8_4:3354348-3354367 None:intergenic 30.0%
GAATCATGTTTGATATCCAA+AGG + chr8_4:3354353-3354372 Msa1307560:intron 30.0%
TAAGCTCTTCATATTCTTGT+TGG + chr8_4:3354493-3354512 Msa1307560:intron 30.0%
! TTAATATTCTAGAGAGCCAT+GGG - chr8_4:3354605-3354624 None:intergenic 30.0%
! TTTAATATTCTAGAGAGCCA+TGG - chr8_4:3354606-3354625 None:intergenic 30.0%
GCATATATAATACCTGCAAA+AGG - chr8_4:3354803-3354822 None:intergenic 30.0%
!! CAATTTGCATTTTTCAGAAG+GGG - chr8_4:3355032-3355051 None:intergenic 30.0%
!! CACAATTTGCATTTTTCAGA+AGG - chr8_4:3355034-3355053 None:intergenic 30.0%
CAATCATGTTTCTCATTTGT+CGG - chr8_4:3355264-3355283 None:intergenic 30.0%
TTGTTGATCCATAAGAAACA+AGG + chr8_4:3355335-3355354 Msa1307560:three_prime_UTR 30.0%
TGTTGATCCATAAGAAACAA+GGG + chr8_4:3355336-3355355 Msa1307560:three_prime_UTR 30.0%
! GTTTTCGTTGCTATGTTTAA+CGG + chr8_4:3355420-3355439 Msa1307560:three_prime_UTR 30.0%
TGAATGTGAAAAGGTAAAAG+TGG + chr8_4:3355480-3355499 Msa1307560:three_prime_UTR 30.0%
CAATAAATAAGAGTTCTCAC+CGG + chr8_4:3355606-3355625 Msa1307560:three_prime_UTR 30.0%
! ACATTCTTGCTTCATTTTCT+TGG + chr8_4:3355729-3355748 Msa1307560:three_prime_UTR 30.0%
! CATTCTTGCTTCATTTTCTT+GGG + chr8_4:3355730-3355749 Msa1307560:three_prime_UTR 30.0%
! ACACCAACTAATTTTTGTGA+AGG + chr8_4:3355925-3355944 Msa1307560:intron 30.0%
ACACCTTCACAAAAATTAGT+TGG - chr8_4:3355931-3355950 None:intergenic 30.0%
!!! TATATTTTTTCTGCTGCCTT+TGG + chr8_4:3356134-3356153 Msa1307560:intron 30.0%
TTTAAGGATTGATTGACCAA+AGG - chr8_4:3356153-3356172 None:intergenic 30.0%
TGTTCTATGGAACTAAATGT+TGG + chr8_4:3356248-3356267 Msa1307560:intron 30.0%
GTTCTATGGAACTAAATGTT+GGG + chr8_4:3356249-3356268 Msa1307560:intron 30.0%
! AGTTTTGCCTTAGATGATTT+AGG + chr8_4:3356427-3356446 Msa1307560:intron 30.0%
! GGATTTAGGTTTAAAATGTC+TGG + chr8_4:3356569-3356588 Msa1307560:intron 30.0%
TGTTAAACATGATTTACGAC+AGG + chr8_4:3356592-3356611 Msa1307560:intron 30.0%
AAAGATAGTGCTATCTACAA+AGG - chr8_4:3356710-3356729 None:intergenic 30.0%
TACAAGTAGAAGATAAACAC+AGG - chr8_4:3356750-3356769 None:intergenic 30.0%
!!! ATACTTTTTCCAATGACTTC+AGG + chr8_4:3356797-3356816 Msa1307560:intron 30.0%
! ATGAGTACTTTGATAGTTCA+TGG + chr8_4:3356924-3356943 Msa1307560:three_prime_UTR 30.0%
ACCGTAAACACAACAAAATA+AGG - chr8_4:3357064-3357083 None:intergenic 30.0%
AATTGATACCAATATGGTGA+CGG - chr8_4:3357219-3357238 None:intergenic 30.0%
!! TTTTTATATGATTGGTCCAG+TGG + chr8_4:3357260-3357279 Msa1307560:intron 30.0%
! TAAAGCACTATACGAGTAAT+AGG - chr8_4:3357290-3357309 None:intergenic 30.0%
AATAATCTAGATTCATGCTC+AGG + chr8_4:3357315-3357334 Msa1307560:intron 30.0%
CCAGAACATTAAGTTCAATA+TGG - chr8_4:3357349-3357368 None:intergenic 30.0%
CCATATTGAACTTAATGTTC+TGG + chr8_4:3357346-3357365 Msa1307560:intron 30.0%
TTTACTTGGTTGAAAGGATT+TGG + chr8_4:3357417-3357436 Msa1307560:three_prime_UTR 30.0%
ATTTGGCCTATTCACTATTA+TGG + chr8_4:3357434-3357453 Msa1307560:three_prime_UTR 30.0%
AACCTGTTCACTTAAATGTT+TGG + chr8_4:3357578-3357597 Msa1307560:intron 30.0%
AACCAAACATTTAAGTGAAC+AGG - chr8_4:3357583-3357602 None:intergenic 30.0%
AGCCAAATATGTTATTCTTG+AGG + chr8_4:3357667-3357686 Msa1307560:three_prime_UTR 30.0%
CTCCTCAAGAATAACATATT+TGG - chr8_4:3357672-3357691 None:intergenic 30.0%
ATATGTTATTCTTGAGGAGA+TGG + chr8_4:3357673-3357692 Msa1307560:three_prime_UTR 30.0%
ATCAAAGAAAAGGCTTACTT+TGG - chr8_4:3357751-3357770 None:intergenic 30.0%
ATCATATTAATGATGAAGGC+GGG + chr8_4:3357849-3357868 Msa1307560:intron 30.0%
TCCCTTGCTAATTGTAAAAA+AGG - chr8_4:3357903-3357922 None:intergenic 30.0%
ATCAGTTCATTATTTGAGCA+AGG + chr8_4:3357949-3357968 Msa1307560:intron 30.0%
TCAGTTCATTATTTGAGCAA+GGG + chr8_4:3357950-3357969 Msa1307560:intron 30.0%
TTTCTTACCAATACAGTGAT+TGG + chr8_4:3358429-3358448 Msa1307560:three_prime_UTR 30.0%
! GGATACAATACAAGTTTGTT+TGG - chr8_4:3358538-3358557 None:intergenic 30.0%
!! TCAGAGAGTTGTAGCTTTAA+AGG + chr8_4:3351368-3351387 Msa1307560:CDS 35.0%
!! CAGAGAGTTGTAGCTTTAAA+GGG + chr8_4:3351369-3351388 Msa1307560:CDS 35.0%
!!! GATTTTGATAGTGGAAGTTC+AGG + chr8_4:3351404-3351423 Msa1307560:CDS 35.0%
! GCCTTTTGTTGAAAAGAATG+AGG + chr8_4:3351565-3351584 Msa1307560:CDS 35.0%
!!! TGCAAGGAAGAGTTTTAGAT+AGG + chr8_4:3351588-3351607 Msa1307560:CDS 35.0%
!!! GCAAGGAAGAGTTTTAGATA+GGG + chr8_4:3351589-3351608 Msa1307560:CDS 35.0%
TTGATAAGTTTCGGAAGGAA+AGG + chr8_4:3351624-3351643 Msa1307560:CDS 35.0%
TGGACGATGATTCTGTTTAT+AGG + chr8_4:3351675-3351694 Msa1307560:CDS 35.0%
GATGATTCTGTTTATAGGAG+AGG + chr8_4:3351680-3351699 Msa1307560:CDS 35.0%
TCTGTTTATAGGAGAGGTAA+TGG + chr8_4:3351686-3351705 Msa1307560:CDS 35.0%
GGACTGTCTTCAATATCAAA+AGG - chr8_4:3351728-3351747 None:intergenic 35.0%
ATATTGAAGACAGTCCTGAA+AGG + chr8_4:3351732-3351751 Msa1307560:CDS 35.0%
TATTGAAGACAGTCCTGAAA+GGG + chr8_4:3351733-3351752 Msa1307560:CDS 35.0%
! GTCTTCAAGATATTTGCTAC+AGG - chr8_4:3351833-3351852 None:intergenic 35.0%
TAAAACCAACAGTGTAAACG+AGG - chr8_4:3351911-3351930 None:intergenic 35.0%
GATAAGAGACGAAGCATAAA+AGG - chr8_4:3352176-3352195 None:intergenic 35.0%
GTATTCATTAAAAAGGGAGC+TGG - chr8_4:3352258-3352277 None:intergenic 35.0%
TATCCACTTTGTAATGCAAG+CGG + chr8_4:3352278-3352297 Msa1307560:intron 35.0%
AGACTAATGTTGTCATGTCT+TGG + chr8_4:3352343-3352362 Msa1307560:intron 35.0%
TAATGTTGTCATGTCTTGGA+GGG + chr8_4:3352347-3352366 Msa1307560:intron 35.0%
TGCGAGGTAAATTTCATTCT+TGG + chr8_4:3352379-3352398 Msa1307560:intron 35.0%
! TTTGCCTCATTTTCCATGTT+TGG - chr8_4:3352639-3352658 None:intergenic 35.0%
GAAAATGAGGCAAATAGACT+AGG + chr8_4:3352645-3352664 Msa1307560:intron 35.0%
CTCTCACTCTTATGATTATG+TGG + chr8_4:3352668-3352687 Msa1307560:intron 35.0%
! TTGCATAAAAGTGTGCTTCA+GGG - chr8_4:3352817-3352836 None:intergenic 35.0%
! TTTGCATAAAAGTGTGCTTC+AGG - chr8_4:3352818-3352837 None:intergenic 35.0%
ATATCAACTAATGCCACAGA+TGG + chr8_4:3352876-3352895 Msa1307560:intron 35.0%
! ACATTTGCTACAATGGTTTG+TGG + chr8_4:3352986-3353005 Msa1307560:intron 35.0%
! TGGTAATGTTACATCAGAAC+CGG + chr8_4:3353051-3353070 Msa1307560:intron 35.0%
AAAGGTAAATAAAGAGGGGA+AGG - chr8_4:3353117-3353136 None:intergenic 35.0%
!! TCTTGTTTGCTTTTGCTTTC+CGG + chr8_4:3353180-3353199 Msa1307560:three_prime_UTR 35.0%
CAAAATGAAAGGAAACTCAC+CGG - chr8_4:3353202-3353221 None:intergenic 35.0%
TGCATATCTCAGAAGACAAT+AGG + chr8_4:3353358-3353377 Msa1307560:intron 35.0%
AGGCATCATAGATGAGAATT+GGG - chr8_4:3353478-3353497 None:intergenic 35.0%
TAGGCATCATAGATGAGAAT+TGG - chr8_4:3353479-3353498 None:intergenic 35.0%
!! ACCTAAAAGTGCTGTTAGAA+TGG + chr8_4:3353583-3353602 Msa1307560:intron 35.0%
!!! TTCATGCTGCTTTGTGATTT+TGG + chr8_4:3353680-3353699 Msa1307560:intron 35.0%
!! ATGTACATTGATTCGCACTT+AGG + chr8_4:3353924-3353943 Msa1307560:intron 35.0%
! TACTTCTGTAGGGTATCTTT+GGG + chr8_4:3354004-3354023 Msa1307560:intron 35.0%
!! TAAAAAGGAGGGTTTTTGGA+GGG - chr8_4:3354200-3354219 None:intergenic 35.0%
!! TTAAAAAGGAGGGTTTTTGG+AGG - chr8_4:3354201-3354220 None:intergenic 35.0%
GATAGAGGATCTTAAAAAGG+AGG - chr8_4:3354212-3354231 None:intergenic 35.0%
CAACTCCATTATATCCTATC+AGG + chr8_4:3354331-3354350 Msa1307560:intron 35.0%
!!! CTGTCTGTATGCTACTTTTT+TGG - chr8_4:3354392-3354411 None:intergenic 35.0%
TTATTGCCTGTTCGAAATTC+TGG - chr8_4:3354476-3354495 None:intergenic 35.0%
! CGTTAGTTATTCTTTTCCCA+TGG + chr8_4:3354586-3354605 Msa1307560:intron 35.0%
AAGTGCATTGTTCAAGCTTT+AGG + chr8_4:3354625-3354644 Msa1307560:intron 35.0%
ATAATGCAGATCTTACACGA+GGG - chr8_4:3355100-3355119 None:intergenic 35.0%
AATAATGCAGATCTTACACG+AGG - chr8_4:3355101-3355120 None:intergenic 35.0%
TCGTGTAAGATCTGCATTAT+TGG + chr8_4:3355100-3355119 Msa1307560:three_prime_UTR 35.0%
GAACAAAGCGATTAAACTGT+AGG - chr8_4:3355206-3355225 None:intergenic 35.0%
!! TGACAACTTTGAAGGGTTTT+GGG - chr8_4:3355308-3355327 None:intergenic 35.0%
!! TTGACAACTTTGAAGGGTTT+TGG - chr8_4:3355309-3355328 None:intergenic 35.0%
GTTGATCCATAAGAAACAAG+GGG + chr8_4:3355337-3355356 Msa1307560:three_prime_UTR 35.0%
TTGATCCATAAGAAACAAGG+GGG + chr8_4:3355338-3355357 Msa1307560:three_prime_UTR 35.0%
! AATTTCCCCCTTGTTTCTTA+TGG - chr8_4:3355346-3355365 None:intergenic 35.0%
TCACATTCACTTCTATGCTT+CGG - chr8_4:3355469-3355488 None:intergenic 35.0%
GCATAGAAGTGAATGTGAAA+AGG + chr8_4:3355471-3355490 Msa1307560:three_prime_UTR 35.0%
GGTAAAAGTGGAGAACAATT+TGG + chr8_4:3355492-3355511 Msa1307560:three_prime_UTR 35.0%
AAAAGTGGAGAACAATTTGG+TGG + chr8_4:3355495-3355514 Msa1307560:three_prime_UTR 35.0%
ACAATAATAGGGATCGTATC+CGG - chr8_4:3355628-3355647 None:intergenic 35.0%
TTTGTGTGTGTATGTGTAGA+TGG - chr8_4:3355669-3355688 None:intergenic 35.0%
CAAATGGCAATAGGATAACT+TGG - chr8_4:3355898-3355917 None:intergenic 35.0%
! GTCTTTTAGCAAATGGCAAT+AGG - chr8_4:3355907-3355926 None:intergenic 35.0%
!! AGTTGGTGTCTTTTAGCAAA+TGG - chr8_4:3355914-3355933 None:intergenic 35.0%
TTGCTAAAAGACACCTCTAA+AGG + chr8_4:3356002-3356021 Msa1307560:intron 35.0%
TGCTAAAAGACACCTCTAAA+GGG + chr8_4:3356003-3356022 Msa1307560:intron 35.0%
ATAAGACTGGCAATGTTCTA+TGG + chr8_4:3356235-3356254 Msa1307560:intron 35.0%
! TAAGAGGTATAGAAAGACCA+AGG + chr8_4:3356520-3356539 Msa1307560:intron 35.0%
GATAAACACAGGCAAAGAAA+AGG - chr8_4:3356739-3356758 None:intergenic 35.0%
!! TTTTTCAGACCTGAAGTCAT+TGG - chr8_4:3356809-3356828 None:intergenic 35.0%
TAATGCAAGAGAAAGAAGTG+CGG - chr8_4:3356879-3356898 None:intergenic 35.0%
TTTCTCTTGCATTAGATCCT+TGG + chr8_4:3356885-3356904 Msa1307560:three_prime_UTR 35.0%
TTCTCTTGCATTAGATCCTT+GGG + chr8_4:3356886-3356905 Msa1307560:three_prime_UTR 35.0%
AGTTTCTTGCTGATGTTCTT+TGG + chr8_4:3356959-3356978 Msa1307560:three_prime_UTR 35.0%
!!! TGGAACACTTGCCTTTTTTA+TGG + chr8_4:3356982-3357001 Msa1307560:three_prime_UTR 35.0%
!!! ACACTTGCCTTTTTTATGGT+AGG + chr8_4:3356986-3357005 Msa1307560:intron 35.0%
ACTTTCATGATGCGTTTACT+TGG + chr8_4:3357403-3357422 Msa1307560:three_prime_UTR 35.0%
CACCAACCATAATAGTGAAT+AGG - chr8_4:3357443-3357462 None:intergenic 35.0%
CTTCAATATTCACGTGATTC+AGG - chr8_4:3358146-3358165 None:intergenic 35.0%
CTGAATCACGTGAATATTGA+AGG + chr8_4:3358144-3358163 Msa1307560:intron 35.0%
AAGCAATGATTTCGAAGAAG+AGG + chr8_4:3358170-3358189 Msa1307560:three_prime_UTR 35.0%
AGCAATGATTTCGAAGAAGA+GGG + chr8_4:3358171-3358190 Msa1307560:three_prime_UTR 35.0%
GGACACAAAAATATCTTCCA+GGG + chr8_4:3358192-3358211 Msa1307560:three_prime_UTR 35.0%
ACCAATACAGTGATTGGTAA+TGG + chr8_4:3358435-3358454 Msa1307560:three_prime_UTR 35.0%
ACCATTACCAATCACTGTAT+TGG - chr8_4:3358439-3358458 None:intergenic 35.0%
!! TTTTTGGGGAAAAATGTTGG+AGG + chr8_4:3358474-3358493 Msa1307560:three_prime_UTR 35.0%
!! TTTTGGGGAAAAATGTTGGA+GGG + chr8_4:3358475-3358494 Msa1307560:three_prime_UTR 35.0%
GGTCAATTTCGTTGTTACAT+TGG + chr8_4:3358496-3358515 Msa1307560:three_prime_UTR 35.0%
!! ACAAGTTTGTTTGGTGTTGA+AGG - chr8_4:3358529-3358548 None:intergenic 35.0%
! TGTGACGACGATGATAATGA+TGG + chr8_4:3351464-3351483 Msa1307560:CDS 40.0%
!! GATGATAATGATGGTGGTGA+TGG + chr8_4:3351473-3351492 Msa1307560:CDS 40.0%
!! ATAATGATGGTGGTGATGGA+AGG + chr8_4:3351477-3351496 Msa1307560:CDS 40.0%
!! TAATGATGGTGGTGATGGAA+GGG + chr8_4:3351478-3351497 Msa1307560:CDS 40.0%
GGATCAGAAATTAGGTGATG+AGG + chr8_4:3351508-3351527 Msa1307560:CDS 40.0%
GTTGAAAAGAATGAGGTGCA+AGG + chr8_4:3351572-3351591 Msa1307560:CDS 40.0%
ATCGTACTAGCACCATTCAT+CGG - chr8_4:3351656-3351675 None:intergenic 40.0%
ATTGAAGACAGTCCTGAAAG+GGG + chr8_4:3351734-3351753 Msa1307560:CDS 40.0%
GTGTAAACGAGGAACTTACA+AGG - chr8_4:3351900-3351919 None:intergenic 40.0%
AAGTTCCTCGTTTACACTGT+TGG + chr8_4:3351903-3351922 Msa1307560:intron 40.0%
AAGTCTGTTGGGAGATCATA+TGG + chr8_4:3352224-3352243 Msa1307560:intron 40.0%
AGTCTGTTGGGAGATCATAT+GGG + chr8_4:3352225-3352244 Msa1307560:intron 40.0%
CTAATGTTGTCATGTCTTGG+AGG + chr8_4:3352346-3352365 Msa1307560:intron 40.0%
!!! TGGAGGGATTATTTTTTGCG+AGG + chr8_4:3352363-3352382 Msa1307560:intron 40.0%
AATGTTACGTGGTCCAAACA+TGG + chr8_4:3352623-3352642 Msa1307560:intron 40.0%
TGGTCCAAACATGGAAAATG+AGG + chr8_4:3352632-3352651 Msa1307560:intron 40.0%
! CTCTGTCACATTTGCTACAA+TGG + chr8_4:3352979-3352998 Msa1307560:three_prime_UTR 40.0%
AATGGAGCAAATGTAGAGTC+CGG - chr8_4:3353073-3353092 None:intergenic 40.0%
GCAAACAAGAGGAGAAAGAT+TGG - chr8_4:3353170-3353189 None:intergenic 40.0%
GGAAAGCAAAAGCAAACAAG+AGG - chr8_4:3353181-3353200 None:intergenic 40.0%
ATTTAAGGAGCTGCATTGCT+AGG + chr8_4:3353278-3353297 Msa1307560:intron 40.0%
TGGGAGCGATTAATGCATAA+AGG + chr8_4:3353309-3353328 Msa1307560:intron 40.0%
! GCCATTCTAACAGCACTTTT+AGG - chr8_4:3353587-3353606 None:intergenic 40.0%
!! GTTGGTTTGAATTGGAAGGT+TGG + chr8_4:3353792-3353811 Msa1307560:intron 40.0%
TTCAAAAGATCAAGCCAGCA+TGG + chr8_4:3353949-3353968 Msa1307560:intron 40.0%
AGGTACATCTGTACTTCTGT+AGG + chr8_4:3353993-3354012 Msa1307560:intron 40.0%
GGTACATCTGTACTTCTGTA+GGG + chr8_4:3353994-3354013 Msa1307560:intron 40.0%
! GTACTTCTGTAGGGTATCTT+TGG + chr8_4:3354003-3354022 Msa1307560:intron 40.0%
! TATCTTTGGGTGGAGGATTT+TGG + chr8_4:3354017-3354036 Msa1307560:intron 40.0%
TGGATGTCAACAACAACCTT+TGG - chr8_4:3354372-3354391 None:intergenic 40.0%
GTAGCATACAGACAGAAGTT+CGG + chr8_4:3354397-3354416 Msa1307560:intron 40.0%
CAGTTACCAGAATTTCGAAC+AGG + chr8_4:3354467-3354486 Msa1307560:intron 40.0%
! TATGACTCAGATCCTTTTGC+AGG + chr8_4:3354788-3354807 Msa1307560:three_prime_UTR 40.0%
! ATTATTGTTGGGAGCGTATC+TGG + chr8_4:3354839-3354858 Msa1307560:three_prime_UTR 40.0%
TGTAGGAAGGAGGTAAAAGA+GGG - chr8_4:3354974-3354993 None:intergenic 40.0%
ATGTAGGAAGGAGGTAAAAG+AGG - chr8_4:3354975-3354994 None:intergenic 40.0%
AGTCAAGAGATGATGTAGGA+AGG - chr8_4:3354987-3355006 None:intergenic 40.0%
GATGAGTCAAGAGATGATGT+AGG - chr8_4:3354991-3355010 None:intergenic 40.0%
!! TTTGCATTTTTCAGAAGGGG+AGG - chr8_4:3355029-3355048 None:intergenic 40.0%
CCGTGTTTGACAACTTTGAA+GGG - chr8_4:3355315-3355334 None:intergenic 40.0%
CCCTTCAAAGTTGTCAAACA+CGG + chr8_4:3355312-3355331 Msa1307560:three_prime_UTR 40.0%
ACCGTGTTTGACAACTTTGA+AGG - chr8_4:3355316-3355335 None:intergenic 40.0%
AATGTTCAGTTAGCGATAGC+AGG - chr8_4:3355714-3355733 None:intergenic 40.0%
! CTTGCTTCATTTTCTTGGGT+TGG + chr8_4:3355734-3355753 Msa1307560:three_prime_UTR 40.0%
ATGTGCAAGGAACTTACCAT+AGG - chr8_4:3355817-3355836 None:intergenic 40.0%
AAGTGGATAATCACACCTTG+AGG + chr8_4:3355973-3355992 Msa1307560:intron 40.0%
GATAGAAAGTTGAGAGTGAG+AGG + chr8_4:3356377-3356396 Msa1307560:intron 40.0%
GCAAGTGCCTAAATCATCTA+AGG - chr8_4:3356437-3356456 None:intergenic 40.0%
TTGCAAAGAAGACCAGAAGA+AGG + chr8_4:3356453-3356472 Msa1307560:intron 40.0%
!!! AAAGCCTTTTTCAACCACGT+GGG - chr8_4:3356648-3356667 None:intergenic 40.0%
ACATAGCTCATCAAGGTAAG+TGG - chr8_4:3356833-3356852 None:intergenic 40.0%
! TTTTCTCGGAATTCTTCCCA+AGG - chr8_4:3356905-3356924 None:intergenic 40.0%
TTCTTGCTGATGTTCTTTGG+TGG + chr8_4:3356962-3356981 Msa1307560:three_prime_UTR 40.0%
! TATATGATTGGTCCAGTGGA+TGG + chr8_4:3357264-3357283 Msa1307560:intron 40.0%
! GTTTCATGCTGTTTGTGTGT+AGG + chr8_4:3357368-3357387 Msa1307560:intron 40.0%
GATGCGTTTACTTGGTTGAA+AGG + chr8_4:3357411-3357430 Msa1307560:three_prime_UTR 40.0%
GGCCTATTCACTATTATGGT+TGG + chr8_4:3357438-3357457 Msa1307560:three_prime_UTR 40.0%
GTGGCATCTGAAAACCTATA+TGG + chr8_4:3357708-3357727 Msa1307560:three_prime_UTR 40.0%
GGGACACAAAAATATCTTCC+AGG + chr8_4:3358191-3358210 Msa1307560:three_prime_UTR 40.0%
! GACAGAATAGAAGAGAGCAT+TGG - chr8_4:3358243-3358262 None:intergenic 40.0%
!! TTTTGAGAATGTAAGGGGAG+GGG - chr8_4:3358567-3358586 None:intergenic 40.0%
!! CTTTTGAGAATGTAAGGGGA+GGG - chr8_4:3358568-3358587 None:intergenic 40.0%
!! GGAGCTTTTGAGAATGTAAG+GGG - chr8_4:3358572-3358591 None:intergenic 40.0%
!! GGGAGCTTTTGAGAATGTAA+GGG - chr8_4:3358573-3358592 None:intergenic 40.0%
!! GATAGTGGAAGTTCAGGATC+CGG + chr8_4:3351410-3351429 Msa1307560:CDS 45.0%
GAAGTTCAGGATCCGGTATT+CGG + chr8_4:3351417-3351436 Msa1307560:CDS 45.0%
! GACGACGATGATAATGATGG+TGG + chr8_4:3351467-3351486 Msa1307560:CDS 45.0%
!!! TGGTGATGGAAGGGTGATTT+TGG + chr8_4:3351487-3351506 Msa1307560:CDS 45.0%
! GATGAATGGTGCTAGTACGA+TGG + chr8_4:3351655-3351674 Msa1307560:CDS 45.0%
! TGGTGGTGACTCGTATGATT+CGG + chr8_4:3351763-3351782 Msa1307560:CDS 45.0%
GAACCGCTTGCATTACAAAG+TGG - chr8_4:3352284-3352303 None:intergenic 45.0%
!!! ATTGGTTGTGCCGTTTTCTG+TGG + chr8_4:3352749-3352768 Msa1307560:intron 45.0%
TGAAAGGCAAAGTCCATCTG+TGG - chr8_4:3352892-3352911 None:intergenic 45.0%
ATAGCTGTTCCAAGAGCAGT+CGG - chr8_4:3352923-3352942 None:intergenic 45.0%
GGTTTGAATTGGAAGGTTGG+AGG + chr8_4:3353795-3353814 Msa1307560:intron 45.0%
TCCATCGGCATATTACTGAC+AGG + chr8_4:3353856-3353875 Msa1307560:three_prime_UTR 45.0%
ACCTGTCAGTAATATGCCGA+TGG - chr8_4:3353860-3353879 None:intergenic 45.0%
TTCCTACAAGCTCAGTGGTT+AGG + chr8_4:3353973-3353992 Msa1307560:intron 45.0%
TACCTAACCACTGAGCTTGT+AGG - chr8_4:3353978-3353997 None:intergenic 45.0%
! TTCTGTAGGGTATCTTTGGG+TGG + chr8_4:3354007-3354026 Msa1307560:intron 45.0%
! TACTACTGTAAGGGTGTGCT+TGG - chr8_4:3354234-3354253 None:intergenic 45.0%
AGCGATATGGCATGCTAAGA+TGG - chr8_4:3354283-3354302 None:intergenic 45.0%
TTAGCATGCCATATCGCTCT+AGG + chr8_4:3354285-3354304 Msa1307560:intron 45.0%
CAATCCTACCTAGAGCGATA+TGG - chr8_4:3354296-3354315 None:intergenic 45.0%
! CATATCGCTCTAGGTAGGAT+TGG + chr8_4:3354294-3354313 Msa1307560:intron 45.0%
! ATGCTTGCTGCTGTTATGTC+TGG + chr8_4:3354753-3354772 Msa1307560:three_prime_UTR 45.0%
! TGCTTGCTGCTGTTATGTCT+GGG + chr8_4:3354754-3354773 Msa1307560:three_prime_UTR 45.0%
TAAGAGGAAGAATTGAGCGG+AGG - chr8_4:3354951-3354970 None:intergenic 45.0%
GGGTAAGAGGAAGAATTGAG+CGG - chr8_4:3354954-3354973 None:intergenic 45.0%
AGGAGGTAAAAGAGGGTAAG+AGG - chr8_4:3354967-3354986 None:intergenic 45.0%
CAAGAGATGATGTAGGAAGG+AGG - chr8_4:3354984-3355003 None:intergenic 45.0%
TTCAGAAGGGGAGGAAGATA+GGG - chr8_4:3355020-3355039 None:intergenic 45.0%
TTTCAGAAGGGGAGGAAGAT+AGG - chr8_4:3355021-3355040 None:intergenic 45.0%
ACTAGGCTACCTGTGAAGTA+TGG - chr8_4:3355131-3355150 None:intergenic 45.0%
! AGTGGAGAACAATTTGGTGG+AGG + chr8_4:3355498-3355517 Msa1307560:three_prime_UTR 45.0%
! GTGGAGAACAATTTGGTGGA+GGG + chr8_4:3355499-3355518 Msa1307560:three_prime_UTR 45.0%
! TGGAGAACAATTTGGTGGAG+GGG + chr8_4:3355500-3355519 Msa1307560:three_prime_UTR 45.0%
GATAATCACACCTTGAGGTG+TGG + chr8_4:3355978-3355997 Msa1307560:intron 45.0%
! TTTTAGCAAGCCACACCTCA+AGG - chr8_4:3355991-3356010 None:intergenic 45.0%
TGCTAGAAGACACCCTTTAG+AGG - chr8_4:3356018-3356037 None:intergenic 45.0%
GTGTGGACAAAATCCATGAC+TGG - chr8_4:3356211-3356230 None:intergenic 45.0%
TGTCCACACAGCTATAAGAC+TGG + chr8_4:3356222-3356241 Msa1307560:intron 45.0%
! TTGCCAGTCTTATAGCTGTG+TGG - chr8_4:3356228-3356247 None:intergenic 45.0%
CGAATGCAACAGTTTATGCG+TGG + chr8_4:3356316-3356335 Msa1307560:intron 45.0%
GACCAGAAGAAGGCCTAATA+CGG + chr8_4:3356463-3356482 Msa1307560:intron 45.0%
AGAAGAAGGCCTAATACGGA+CGG + chr8_4:3356467-3356486 Msa1307560:intron 45.0%
TGCGATTTACCGTCCGTATT+AGG - chr8_4:3356479-3356498 None:intergenic 45.0%
TCCATATAACTAACCCCACG+TGG + chr8_4:3356631-3356650 Msa1307560:intron 45.0%
!! ACCACGTGGGGTTAGTTATA+TGG - chr8_4:3356635-3356654 None:intergenic 45.0%
TAACCCCACGTGGTTGAAAA+AGG + chr8_4:3356641-3356660 Msa1307560:intron 45.0%
!!! AAGCCTTTTTCAACCACGTG+GGG - chr8_4:3356647-3356666 None:intergenic 45.0%
!!! CAAAGCCTTTTTCAACCACG+TGG - chr8_4:3356649-3356668 None:intergenic 45.0%
CACAGGCAAAGAAAAGGATC+AGG - chr8_4:3356733-3356752 None:intergenic 45.0%
TGGAGCTACATAGCTCATCA+AGG - chr8_4:3356840-3356859 None:intergenic 45.0%
GAGCTATGTAGCTCCAGTAA+TGG + chr8_4:3356844-3356863 Msa1307560:three_prime_UTR 45.0%
CACAATAGCAGGGGTTGTTA+AGG + chr8_4:3357190-3357209 Msa1307560:three_prime_UTR 45.0%
AATAGCAGGGGTTGTTAAGG+AGG + chr8_4:3357193-3357212 Msa1307560:three_prime_UTR 45.0%
! TGCTGTTTGTGTGTAGGTTG+CGG + chr8_4:3357374-3357393 Msa1307560:intron 45.0%
AGATACCAGAAGCTTCATGC+AGG + chr8_4:3357608-3357627 Msa1307560:intron 45.0%
GAGGAGATGGATGAACAAGA+TGG + chr8_4:3357686-3357705 Msa1307560:three_prime_UTR 45.0%
GAGATGGATGAACAAGATGG+TGG + chr8_4:3357689-3357708 Msa1307560:three_prime_UTR 45.0%
!! TGGCGTTGATGATATGGCTA+AGG - chr8_4:3358223-3358242 None:intergenic 45.0%
!! GAGCATTGGCGTTGATGATA+TGG - chr8_4:3358229-3358248 None:intergenic 45.0%
TTTGAGAATGTAAGGGGAGG+GGG - chr8_4:3358566-3358585 None:intergenic 45.0%
!! GCTTTTGAGAATGTAAGGGG+AGG - chr8_4:3358569-3358588 None:intergenic 45.0%
!! GGGGAGCTTTTGAGAATGTA+AGG - chr8_4:3358574-3358593 None:intergenic 45.0%
!!! AATGAAATAATTTATTTTTT+TGG + chr8_4:3353031-3353050 Msa1307560:intron 5.0%
!! TATATAAATATACAATAATA+GGG - chr8_4:3355639-3355658 None:intergenic 5.0%
!! ATATATAAATATACAATAAT+AGG - chr8_4:3355640-3355659 None:intergenic 5.0%
!!! ATTGTATTAAAATATTTTTT+TGG + chr8_4:3358378-3358397 Msa1307560:three_prime_UTR 5.0%
CGAAAGCTCTCTCCGAATAC+CGG - chr8_4:3351432-3351451 None:intergenic 50.0%
! GAGAGCTTTCGTTTTCGCGT+TGG + chr8_4:3351441-3351460 Msa1307560:CDS 50.0%
! GAAAGGATCGTGCCGATGAA+TGG + chr8_4:3351641-3351660 Msa1307560:CDS 50.0%
AGTCCTGAAAGGGGAACAGT+TGG + chr8_4:3351743-3351762 Msa1307560:CDS 50.0%
GGTGGTGACTCGTATGATTC+GGG + chr8_4:3351764-3351783 Msa1307560:CDS 50.0%
GTGGTGACTCGTATGATTCG+GGG + chr8_4:3351765-3351784 Msa1307560:CDS 50.0%
! TGGTGACTCGTATGATTCGG+GGG + chr8_4:3351766-3351785 Msa1307560:CDS 50.0%
TAGCTGTTCCAAGAGCAGTC+GGG - chr8_4:3352922-3352941 None:intergenic 50.0%
GACTGCTCTTGGAACAGCTA+TGG + chr8_4:3352922-3352941 Msa1307560:three_prime_UTR 50.0%
ATGGCTTCCTACAAGCTCAG+TGG + chr8_4:3353968-3353987 Msa1307560:intron 50.0%
! TGTAGGGTATCTTTGGGTGG+AGG + chr8_4:3354010-3354029 Msa1307560:intron 50.0%
! CTTTGGGTGGAGGATTTTGG+AGG + chr8_4:3354020-3354039 Msa1307560:intron 50.0%
!! TGGAGGATTTTGGAGGAGAG+TGG + chr8_4:3354027-3354046 Msa1307560:intron 50.0%
!! GGAGGATTTTGGAGGAGAGT+GGG + chr8_4:3354028-3354047 Msa1307560:intron 50.0%
!! GAGGATTTTGGAGGAGAGTG+GGG + chr8_4:3354029-3354048 Msa1307560:intron 50.0%
!! AGGATTTTGGAGGAGAGTGG+GGG + chr8_4:3354030-3354049 Msa1307560:intron 50.0%
! GTAAGGGTGTGCTTGGATAG+AGG - chr8_4:3354227-3354246 None:intergenic 50.0%
! CATGCCATATCGCTCTAGGT+AGG + chr8_4:3354289-3354308 Msa1307560:intron 50.0%
CTGTTATGTCTGGGTTTCGC+TGG + chr8_4:3354763-3354782 Msa1307560:three_prime_UTR 50.0%
AGGAAGAATTGAGCGGAGGA+GGG - chr8_4:3354947-3354966 None:intergenic 50.0%
CAACACAGTGTGCAGTTTGG+CGG - chr8_4:3355075-3355094 None:intergenic 50.0%
GCACAACACAGTGTGCAGTT+TGG - chr8_4:3355078-3355097 None:intergenic 50.0%
TTGGACCGTCCATACTTCAC+AGG + chr8_4:3355119-3355138 Msa1307560:three_prime_UTR 50.0%
GGCTACCTGTGAAGTATGGA+CGG - chr8_4:3355127-3355146 None:intergenic 50.0%
GCTATGTTTAACGGTGACGC+CGG + chr8_4:3355429-3355448 Msa1307560:three_prime_UTR 50.0%
ACTTCTATGCTTCGGCCTCA+AGG - chr8_4:3355461-3355480 None:intergenic 50.0%
GTCCGTATTAGGCCTTCTTC+TGG - chr8_4:3356468-3356487 None:intergenic 50.0%
TACGGACGGTAAATCGCATG+TGG + chr8_4:3356481-3356500 Msa1307560:intron 50.0%
TGTAGCTCCAGTAATGGCTG+TGG + chr8_4:3356850-3356869 Msa1307560:three_prime_UTR 50.0%
CCCTGCTATTGTGACTGTGA+CGG - chr8_4:3357183-3357202 None:intergenic 50.0%
CCGTCACAGTCACAATAGCA+GGG + chr8_4:3357180-3357199 Msa1307560:three_prime_UTR 50.0%
CGTCACAGTCACAATAGCAG+GGG + chr8_4:3357181-3357200 Msa1307560:three_prime_UTR 50.0%
TAAGGAGGCCGTCACCATAT+TGG + chr8_4:3357208-3357227 Msa1307560:three_prime_UTR 50.0%
ACGAGTAATAGGCCATCCAC+TGG - chr8_4:3357279-3357298 None:intergenic 50.0%
TGTCACCTGCATGAAGCTTC+TGG - chr8_4:3357616-3357635 None:intergenic 50.0%
GCTTCATGCAGGTGACAATG+TGG + chr8_4:3357619-3357638 Msa1307560:three_prime_UTR 50.0%
ATATGGCTAAGGCAAGTCCC+TGG - chr8_4:3358212-3358231 None:intergenic 50.0%
CCACCAACTGTTCCCCTTTC+AGG - chr8_4:3351749-3351768 None:intergenic 55.0%
CCTGAAAGGGGAACAGTTGG+TGG + chr8_4:3351746-3351765 Msa1307560:CDS 55.0%
! GGTGACTCGTATGATTCGGG+GGG + chr8_4:3351767-3351786 Msa1307560:CDS 55.0%
! TATGATTCGGGGGGTGGTGT+TGG + chr8_4:3351776-3351795 Msa1307560:CDS 55.0%
GCAGTCGGGACAACTGTGAA+AGG - chr8_4:3352908-3352927 None:intergenic 55.0%
ACAGTTGTCCCGACTGCTCT+TGG + chr8_4:3352911-3352930 Msa1307560:three_prime_UTR 55.0%
GAGCTTGTAGGAAGCCATGC+TGG - chr8_4:3353966-3353985 None:intergenic 55.0%
!! GGATTTTGGAGGAGAGTGGG+GGG + chr8_4:3354031-3354050 Msa1307560:intron 55.0%
GAGGAAGAATTGAGCGGAGG+AGG - chr8_4:3354948-3354967 None:intergenic 55.0%
GGGGAGGAAGATAGGGTTGA+TGG - chr8_4:3355013-3355032 None:intergenic 55.0%
TTCGGCCTCAAGGTTGTAGC+CGG - chr8_4:3355451-3355470 None:intergenic 55.0%
GCCGTCACAGTCACAATAGC+AGG + chr8_4:3357179-3357198 Msa1307560:three_prime_UTR 55.0%
AGAATGTAAGGGGAGGGGGT+AGG - chr8_4:3358562-3358581 None:intergenic 55.0%
! GACTCGTATGATTCGGGGGG+TGG + chr8_4:3351770-3351789 Msa1307560:CDS 60.0%
! TGACGCCGGCTACAACCTTG+AGG + chr8_4:3355443-3355462 Msa1307560:three_prime_UTR 60.0%
GCGGTTGCCACAGCCATTAC+TGG - chr8_4:3356860-3356879 None:intergenic 60.0%
ATGTAAGGGGAGGGGGTAGG+AGG - chr8_4:3358559-3358578 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 3351347 3358613 3351347 ID=Msa1307560;Name=Msa1307560
chr8_4 mRNA 3351347 3358613 3351347 ID=Msa1307560-mRNA-1;Parent=Msa1307560;Name=Msa1307560-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.88|0.9|1|0.77|0.7|10|2292|175
chr8_4 exon 3351347 3351873 3351347 ID=Msa1307560-mRNA-1:exon:963;Parent=Msa1307560-mRNA-1
chr8_4 exon 3352895 3353000 3352895 ID=Msa1307560-mRNA-1:exon:964;Parent=Msa1307560-mRNA-1
chr8_4 exon 3353152 3353201 3353152 ID=Msa1307560-mRNA-1:exon:965;Parent=Msa1307560-mRNA-1
chr8_4 exon 3353810 3353877 3353810 ID=Msa1307560-mRNA-1:exon:966;Parent=Msa1307560-mRNA-1
chr8_4 exon 3354709 3355819 3354709 ID=Msa1307560-mRNA-1:exon:967;Parent=Msa1307560-mRNA-1
chr8_4 exon 3356819 3357003 3356819 ID=Msa1307560-mRNA-1:exon:968;Parent=Msa1307560-mRNA-1
chr8_4 exon 3357143 3357229 3357143 ID=Msa1307560-mRNA-1:exon:969;Parent=Msa1307560-mRNA-1
chr8_4 exon 3357390 3357484 3357390 ID=Msa1307560-mRNA-1:exon:970;Parent=Msa1307560-mRNA-1
chr8_4 exon 3357610 3357752 3357610 ID=Msa1307560-mRNA-1:exon:971;Parent=Msa1307560-mRNA-1
chr8_4 exon 3358166 3358613 3358166 ID=Msa1307560-mRNA-1:exon:972;Parent=Msa1307560-mRNA-1
chr8_4 CDS 3351347 3351873 3351347 ID=Msa1307560-mRNA-1:cds;Parent=Msa1307560-mRNA-1
chr8_4 CDS 3352895 3352895 3352895 ID=Msa1307560-mRNA-1:cds;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3352896 3353000 3352896 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3353152 3353201 3353152 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3353810 3353877 3353810 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3354709 3355819 3354709 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3356819 3357003 3356819 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3357143 3357229 3357143 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3357390 3357484 3357390 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3357610 3357752 3357610 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
chr8_4 three_prime_UTR 3358166 3358613 3358166 ID=Msa1307560-mRNA-1:three_prime_utr;Parent=Msa1307560-mRNA-1
Gene Sequence

>Msa1307560

ATGGTACACATTGAATTAGATTCAGAGAGTTGTAGCTTTAAAGGGATTGCTATTGATGATTTTGATAGTGGAAGTTCAGGATCCGGTATTCGGAGAGAGCTTTCGTTTTCGCGTTGGTGTGACGACGATGATAATGATGGTGGTGATGGAAGGGTGATTTTGGATCAGAAATTAGGTGATGAGGATGTTATTGTAGAAGAAGACGCTGTTTTTGAGTTGCCTTTTGTTGAAAAGAATGAGGTGCAAGGAAGAGTTTTAGATAGGGAGAGATTTTCTTTTGATAAGTTTCGGAAGGAAAGGATCGTGCCGATGAATGGTGCTAGTACGATGGACGATGATTCTGTTTATAGGAGAGGTAATGGATCTGAGAAGTATGTGCCTTTTGATATTGAAGACAGTCCTGAAAGGGGAACAGTTGGTGGTGACTCGTATGATTCGGGGGGTGGTGTTGGATCACTGCATAAAAGCTCTGAAAATACTGTTCCTGTAGCAAATATCTTGAAGACTATGTTTTTCATATTTGTGTGA

Protein sequence

>Msa1307560

MVHIELDSESCSFKGIAIDDFDSGSSGSGIRRELSFSRWCDDDDNDGGDGRVILDQKLGDEDVIVEEDAVFELPFVEKNEVQGRVLDRERFSFDKFRKERIVPMNGASTMDDDSVYRRGNGSEKYVPFDIEDSPERGTVGGDSYDSGGGVGSLHKSSENTVPVANILKTMFFIFV*