AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179630 MtrunA17_Chr8g0341861 97.714 175 4 0 1 175 1 175 2.03e-120 349
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 164 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTGTTTATTATATTTAA+TGG 0.131610 8_1:-13123760 Msa1179630:three_prime_UTR
AAGAAACAGAATTTGAAATT+TGG 0.144508 8_1:-13124602 Msa1179630:three_prime_UTR
ATATATAAATATACAATAAT+AGG 0.165485 8_1:+13123680 None:intergenic
ATTTGGCCTATTCACTATTA+TGG 0.187662 8_1:-13121882 Msa1179630:three_prime_UTR
GATTATTCAGTTACAGATTT+TGG 0.191219 8_1:-13121044 Msa1179630:three_prime_UTR
TCAGAGAGTTGTAGCTTTAA+AGG 0.193111 8_1:-13127951 Msa1179630:CDS
TAACAAAAGATTCAGATTAA+AGG 0.199333 8_1:-13124419 Msa1179630:three_prime_UTR
TGGTGATGGAAGGGTGATTT+TGG 0.207922 8_1:-13127832 Msa1179630:CDS
ACTTTGGATATGAAATTATT+TGG 0.222214 8_1:+13121584 None:intergenic
TTGACAACTTTGAAGGGTTT+TGG 0.234488 8_1:+13124011 None:intergenic
CTCCTCAAGAATAACATATT+TGG 0.237086 8_1:+13121647 None:intergenic
AGAAACAGAATTTGAAATTT+GGG 0.241265 8_1:-13124601 Msa1179630:three_prime_UTR
TCGTGTAAGATCTGCATTAT+TGG 0.248291 8_1:-13124217 Msa1179630:three_prime_UTR
ATGCTTGCTGCTGTTATGTC+TGG 0.276795 8_1:-13124564 Msa1179630:three_prime_UTR
ATTATTGTTGGGAGCGTATC+TGG 0.277369 8_1:-13124478 Msa1179630:three_prime_UTR
AGTACTATATATCTATATTT+AGG 0.287574 8_1:+13124159 None:intergenic
AGTTTCTTGCTGATGTTCTT+TGG 0.296937 8_1:-13122356 Msa1179630:three_prime_UTR
TTTACTTGGTTGAAAGGATT+TGG 0.305186 8_1:-13121899 Msa1179630:three_prime_UTR
GGTGGTGACTCGTATGATTC+GGG 0.312778 8_1:-13127555 Msa1179630:CDS
TTTCTCTTGCATTAGATCCT+TGG 0.319284 8_1:-13122430 Msa1179630:three_prime_UTR
ATGAGTACTTTGATAGTTCA+TGG 0.322932 8_1:-13122391 Msa1179630:three_prime_UTR
TTCTCTTGCATTAGATCCTT+GGG 0.329763 8_1:-13122429 Msa1179630:three_prime_UTR
ATATATCTATATTTAGGAAT+TGG 0.331421 8_1:+13124165 None:intergenic
TTTCAGAAGGGGAGGAAGAT+AGG 0.332254 8_1:+13124299 None:intergenic
TGGACGATGATTCTGTTTAT+AGG 0.334225 8_1:-13127644 Msa1179630:CDS
TATATGTTGTAGATCATAAT+AGG 0.345789 8_1:-13121000 Msa1179630:three_prime_UTR
GCGGTTGCCACAGCCATTAC+TGG 0.348920 8_1:+13122458 None:intergenic
GAGCATTGGCGTTGATGATA+TGG 0.349849 8_1:+13121090 None:intergenic
TTTCTTACCAATACAGTGAT+TGG 0.360244 8_1:-13120887 Msa1179630:three_prime_UTR
GAGGAAGAATTGAGCGGAGG+AGG 0.363180 8_1:+13124372 None:intergenic
GGTAAAAGTGGAGAACAATT+TGG 0.367119 8_1:-13123825 Msa1179630:three_prime_UTR
CAATCATGTTTCTCATTTGT+CGG 0.367185 8_1:+13124056 None:intergenic
CAGAGAGTTGTAGCTTTAAA+GGG 0.368349 8_1:-13127950 Msa1179630:CDS
TGAAATTATTTGGTCCATAT+AGG 0.374264 8_1:+13121594 None:intergenic
TGTCACCTGCATGAAGCTTC+TGG 0.376676 8_1:+13121703 None:intergenic
ACAGTTGTCCCGACTGCTCT+TGG 0.379237 8_1:-13126407 Msa1179630:three_prime_UTR
GGGGAGGAAGATAGGGTTGA+TGG 0.381322 8_1:+13124307 None:intergenic
TTCAGAAGGGGAGGAAGATA+GGG 0.386770 8_1:+13124300 None:intergenic
TGGTGGTGACTCGTATGATT+CGG 0.389772 8_1:-13127556 Msa1179630:CDS
ACTAGGCTACCTGTGAAGTA+TGG 0.393809 8_1:+13124189 None:intergenic
AAAGTTAATTGATACCAATA+TGG 0.397508 8_1:+13122094 None:intergenic
GAAGTTCAGGATCCGGTATT+CGG 0.399782 8_1:-13127902 Msa1179630:CDS
AGGAGGTAAAAGAGGGTAAG+AGG 0.400064 8_1:+13124353 None:intergenic
TTTGAGAATGTAAGGGGAGG+GGG 0.400516 8_1:+13120752 None:intergenic
GGATACAATACAAGTTTGTT+TGG 0.401116 8_1:+13120780 None:intergenic
TATATAAATATACAATAATA+GGG 0.403995 8_1:+13123681 None:intergenic
GTGGCATCTGAAAACCTATA+TGG 0.411109 8_1:-13121608 Msa1179630:three_prime_UTR
CACAATAGCAGGGGTTGTTA+AGG 0.412687 8_1:-13122126 Msa1179630:three_prime_UTR
ACAAGTTTGTTTGGTGTTGA+AGG 0.413238 8_1:+13120789 None:intergenic
GCAAACAAGAGGAGAAAGAT+TGG 0.417679 8_1:+13126150 None:intergenic
GGCCTATTCACTATTATGGT+TGG 0.420950 8_1:-13121878 Msa1179630:three_prime_UTR
TCACATTCACTTCTATGCTT+CGG 0.422056 8_1:+13123851 None:intergenic
TGCTTGCTGCTGTTATGTCT+GGG 0.429245 8_1:-13124563 Msa1179630:three_prime_UTR
CTCTGTCACATTTGCTACAA+TGG 0.434598 8_1:-13126339 Msa1179630:intron
TCTGTTTATAGGAGAGGTAA+TGG 0.441718 8_1:-13127633 Msa1179630:CDS
TTCTTGCTGATGTTCTTTGG+TGG 0.442105 8_1:-13122353 Msa1179630:three_prime_UTR
CTGTTATGTCTGGGTTTCGC+TGG 0.446264 8_1:-13124554 Msa1179630:three_prime_UTR
TAAGGAGGCCGTCACCATAT+TGG 0.448702 8_1:-13122108 Msa1179630:intron
ACCAATACAGTGATTGGTAA+TGG 0.453845 8_1:-13120881 Msa1179630:three_prime_UTR
TATTGAAGACAGTGTTGAAA+GGG 0.454044 8_1:-13127586 Msa1179630:CDS
ACTTTCATGATGCGTTTACT+TGG 0.454790 8_1:-13121913 Msa1179630:three_prime_UTR
CGAAAGCTCTCTCCGAATAC+CGG 0.456403 8_1:+13127890 None:intergenic
GCCGTCACAGTCACAATAGC+AGG 0.457610 8_1:-13122137 Msa1179630:three_prime_UTR
TTTGTGTGTGTATGTGTAGA+TGG 0.461936 8_1:+13123651 None:intergenic
GCACAACACAGTGTGCAGTT+TGG 0.466555 8_1:+13124242 None:intergenic
AAAATTACACTGTAAATGTA+AGG 0.471890 8_1:+13123949 None:intergenic
GATGCGTTTACTTGGTTGAA+AGG 0.473291 8_1:-13121905 Msa1179630:three_prime_UTR
ATTCCTGATAGTTTAAAACT+TGG 0.475966 8_1:+13125497 None:intergenic
GATAGTGGAAGTTCAGGATC+CGG 0.479106 8_1:-13127909 Msa1179630:CDS
CACCAACCATAATAGTGAAT+AGG 0.480731 8_1:+13121876 None:intergenic
TGAATGTGAAAAGGTAAAAG+TGG 0.482408 8_1:-13123837 Msa1179630:three_prime_UTR
TATATTTAGGAATTGGAACT+AGG 0.484248 8_1:+13124172 None:intergenic
AATGCATCTAAAATATTAAG+TGG 0.484373 8_1:+13120915 None:intergenic
ATGTAGGAAGGAGGTAAAAG+AGG 0.486189 8_1:+13124345 None:intergenic
GGTCAATTTCGTTGTTACAT+TGG 0.486992 8_1:-13120819 Msa1179630:three_prime_UTR
ACCATTACCAATCACTGTAT+TGG 0.491682 8_1:+13120880 None:intergenic
AGTCAAGAGATGATGTAGGA+AGG 0.500937 8_1:+13124333 None:intergenic
ACCGTGTTTGACAACTTTGA+AGG 0.502314 8_1:+13124004 None:intergenic
GAAACAGAATTTGAAATTTG+GGG 0.502876 8_1:-13124600 Msa1179630:three_prime_UTR
AATGTTCAGTTAGCGATAGC+AGG 0.503802 8_1:+13123606 None:intergenic
GATGAGTCAAGAGATGATGT+AGG 0.503818 8_1:+13124329 None:intergenic
AGATCATCATACAAAAGATT+CGG 0.504216 8_1:-13121673 Msa1179630:three_prime_UTR
ACACTGTCTTCAATATCAAA+AGG 0.505030 8_1:+13127594 None:intergenic
GAAAGGATCGTGCCGATGAA+TGG 0.505519 8_1:-13127678 Msa1179630:CDS
ACTTCTATGCTTCGGCCTCA+AGG 0.506147 8_1:+13123859 None:intergenic
ATATGTTATTCTTGAGGAGA+TGG 0.508928 8_1:-13121643 Msa1179630:three_prime_UTR
TTGATAAGTTTCGGAAGGAA+AGG 0.517003 8_1:-13127695 Msa1179630:CDS
GTCTTCAAGATATTTGCTAC+AGG 0.517741 8_1:+13127489 None:intergenic
ACATAGCTCATCAAGGTAAG+TGG 0.518542 8_1:+13122485 None:intergenic
TTCGGCCTCAAGGTTGTAGC+CGG 0.523367 8_1:+13123869 None:intergenic
CCGTGTTTGACAACTTTGAA+GGG 0.525410 8_1:+13124005 None:intergenic
GCATAGAAGTGAATGTGAAA+AGG 0.526950 8_1:-13123846 Msa1179630:three_prime_UTR
TAAATATAGATATATAGTAC+TGG 0.527570 8_1:-13124157 Msa1179630:three_prime_UTR
ACAATAATAGGGATCGTATC+CGG 0.528668 8_1:+13123692 None:intergenic
GACTGCTCTTGGAACAGCTA+TGG 0.528783 8_1:-13126396 Msa1179630:three_prime_UTR
GCATATATAATACCTGCAAA+AGG 0.531461 8_1:+13124517 None:intergenic
CAAGAGATGATGTAGGAAGG+AGG 0.533092 8_1:+13124336 None:intergenic
GGATCAGAAATTAGGTGATG+AGG 0.534429 8_1:-13127811 Msa1179630:CDS
CAACACAGTGTGCAGTTTGG+CGG 0.540395 8_1:+13124245 None:intergenic
AATAATATAAGAAAATGAAA+AGG 0.542918 8_1:+13124495 None:intergenic
ATATGGCTAAGGCAAGTCCC+TGG 0.544792 8_1:+13121107 None:intergenic
TCCATCGGCATATTACTGAC+AGG 0.547715 8_1:-13125461 Msa1179630:intron
GAACAAAGCGATTAAACTGT+AGG 0.548352 8_1:+13124114 None:intergenic
TGTAGGAAGGAGGTAAAAGA+GGG 0.550336 8_1:+13124346 None:intergenic
AGCCAAATATGTTATTCTTG+AGG 0.551577 8_1:-13121649 Msa1179630:three_prime_UTR
ATATTGAAGACAGTGTTGAA+AGG 0.554984 8_1:-13127587 Msa1179630:CDS
ATTGAAAAGAAAGAATCCTA+TGG 0.555348 8_1:-13123519 Msa1179630:intron
AGTGGAGAACAATTTGGTGG+AGG 0.555552 8_1:-13123819 Msa1179630:three_prime_UTR
AGGAAGAATTGAGCGGAGGA+GGG 0.555907 8_1:+13124373 None:intergenic
GATGATAATGATGGTGGTGA+TGG 0.556719 8_1:-13127846 Msa1179630:CDS
GTGGAGAACAATTTGGTGGA+GGG 0.560757 8_1:-13123818 Msa1179630:three_prime_UTR
CCCTTCAAAGTTGTCAAACA+CGG 0.562020 8_1:-13124005 Msa1179630:three_prime_UTR
GCAGTCGGGACAACTGTGAA+AGG 0.567917 8_1:+13126413 None:intergenic
AAGCAATGATTTCGAAGAAG+AGG 0.568201 8_1:-13121146 Msa1179630:three_prime_UTR
AATAGCAGGGGTTGTTAAGG+AGG 0.572240 8_1:-13122123 Msa1179630:three_prime_UTR
ATCGTACTAGCACCATTCAT+CGG 0.574131 8_1:+13127666 None:intergenic
ATAATGATGGTGGTGATGGA+AGG 0.581801 8_1:-13127842 Msa1179630:CDS
AGTGTTGAAAGGGGAACAGT+TGG 0.582603 8_1:-13127576 Msa1179630:CDS
TGGCGTTGATGATATGGCTA+AGG 0.583630 8_1:+13121096 None:intergenic
AGATACCAGAAGCTTCATGC+AGG 0.583657 8_1:-13121708 Msa1179630:three_prime_UTR
TAAGAGGAAGAATTGAGCGG+AGG 0.583756 8_1:+13124369 None:intergenic
GGTTTGAATTGGAAGGTTGG+AGG 0.584315 8_1:-13125522 Msa1179630:intron
TTGGACCGTCCATACTTCAC+AGG 0.586362 8_1:-13124198 Msa1179630:three_prime_UTR
TTGTTGATCCATAAGAAACA+AGG 0.586605 8_1:-13123982 Msa1179630:three_prime_UTR
GTTGAAAAGAATGAGGTGCA+AGG 0.586920 8_1:-13127747 Msa1179630:CDS
TAGCTGTTCCAAGAGCAGTC+GGG 0.589209 8_1:+13126399 None:intergenic
ACCTGTCAGTAATATGCCGA+TGG 0.590074 8_1:+13125460 None:intergenic
ATAGCTGTTCCAAGAGCAGT+CGG 0.592561 8_1:+13126398 None:intergenic
TGGAGCTACATAGCTCATCA+AGG 0.595512 8_1:+13122478 None:intergenic
GATGATTCTGTTTATAGGAG+AGG 0.598444 8_1:-13127639 Msa1179630:CDS
GTGGTGACTCGTATGATTCG+GGG 0.601391 8_1:-13127554 Msa1179630:CDS
AGCAATGATTTCGAAGAAGA+GGG 0.603074 8_1:-13121145 Msa1179630:three_prime_UTR
AAAAGTGGAGAACAATTTGG+TGG 0.607879 8_1:-13123822 Msa1179630:three_prime_UTR
CCGTCACAGTCACAATAGCA+GGG 0.608410 8_1:-13122136 Msa1179630:three_prime_UTR
GGAAAGCAAAAGCAAACAAG+AGG 0.608751 8_1:+13126139 None:intergenic
GGGTAAGAGGAAGAATTGAG+CGG 0.613826 8_1:+13124366 None:intergenic
GTTGAAAGGGGAACAGTTGG+TGG 0.614449 8_1:-13127573 Msa1179630:CDS
TGGTGACTCGTATGATTCGG+GGG 0.616100 8_1:-13127553 Msa1179630:CDS
GGCTACCTGTGAAGTATGGA+CGG 0.616357 8_1:+13124193 None:intergenic
AATTGATACCAATATGGTGA+CGG 0.618158 8_1:+13122100 None:intergenic
TAATGATGGTGGTGATGGAA+GGG 0.620916 8_1:-13127841 Msa1179630:CDS
GATGAATGGTGCTAGTACGA+TGG 0.623958 8_1:-13127664 Msa1179630:CDS
TGTAGCTCCAGTAATGGCTG+TGG 0.626348 8_1:-13122465 Msa1179630:three_prime_UTR
TGGAGAACAATTTGGTGGAG+GGG 0.626348 8_1:-13123817 Msa1179630:three_prime_UTR
GACAGAATAGAAGAGAGCAT+TGG 0.631652 8_1:+13121076 None:intergenic
TGTTGATCCATAAGAAACAA+GGG 0.638024 8_1:-13123981 Msa1179630:three_prime_UTR
GAGCTATGTAGCTCCAGTAA+TGG 0.650395 8_1:-13122471 Msa1179630:three_prime_UTR
ATTGAAGACAGTGTTGAAAG+GGG 0.663110 8_1:-13127585 Msa1179630:CDS
CCCTGCTATTGTGACTGTGA+CGG 0.667298 8_1:+13122136 None:intergenic
CAATAAATAAGAGTTCTCAC+CGG 0.670931 8_1:-13123711 Msa1179630:three_prime_UTR
GTTGATCCATAAGAAACAAG+GGG 0.676845 8_1:-13123980 Msa1179630:three_prime_UTR
CGTCACAGTCACAATAGCAG+GGG 0.682759 8_1:-13122135 Msa1179630:three_prime_UTR
GCTTCATGCAGGTGACAATG+TGG 0.684466 8_1:-13121697 Msa1179630:three_prime_UTR
GCTATGTTTAACGGTGACGC+CGG 0.687645 8_1:-13123888 Msa1179630:three_prime_UTR
GAGGAGATGGATGAACAAGA+TGG 0.689009 8_1:-13121630 Msa1179630:three_prime_UTR
TGACGCCGGCTACAACCTTG+AGG 0.693977 8_1:-13123874 Msa1179630:three_prime_UTR
TGTGACGACGATGATAATGA+TGG 0.708588 8_1:-13127855 Msa1179630:CDS
AATAATGCAGATCTTACACG+AGG 0.710389 8_1:+13124219 None:intergenic
GGTGACTCGTATGATTCGGG+GGG 0.712537 8_1:-13127552 Msa1179630:CDS
GAGATGGATGAACAAGATGG+TGG 0.719797 8_1:-13121627 Msa1179630:three_prime_UTR
TTGATCCATAAGAAACAAGG+GGG 0.726217 8_1:-13123979 Msa1179630:three_prime_UTR
GACGACGATGATAATGATGG+TGG 0.757338 8_1:-13127852 Msa1179630:CDS
TAATGCAAGAGAAAGAAGTG+CGG 0.763184 8_1:+13122439 None:intergenic
ATAATGCAGATCTTACACGA+GGG 0.785253 8_1:+13124220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG + chr8_1:13125423-13125442 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr8_1:13125424-13125443 None:intergenic 0.0%
!!! ATTAAACATTCTAAAATTTA+AGG - chr8_1:13122642-13122661 Msa1179630:intron 10.0%
!! AATAATATAAGAAAATGAAA+AGG + chr8_1:13124204-13124223 None:intergenic 10.0%
!!! ATATTTTATATATTCATTTG+TGG - chr8_1:13127179-13127198 Msa1179630:intron 10.0%
!!! AAATATTTTAATACAATACT+AGG + chr8_1:13127755-13127774 None:intergenic 10.0%
!! AGAAAAATAAATAAAATTTG+GGG + chr8_1:13127974-13127993 None:intergenic 10.0%
!! CAGAAAAATAAATAAAATTT+GGG + chr8_1:13127975-13127994 None:intergenic 10.0%
!!! ATATGAAATGTTTTAACAAT+AGG - chr8_1:13122101-13122120 Msa1179630:intron 15.0%
!!! TGTCATTTAATTATAAATGT+TGG - chr8_1:13123153-13123172 Msa1179630:intron 15.0%
!! TGAAATGATAAATAATACTA+TGG + chr8_1:13123283-13123302 None:intergenic 15.0%
!!! TATTTTTCTTTCCTAAATTA+AGG - chr8_1:13123435-13123454 Msa1179630:intron 15.0%
!! TTAAAATATCAACTTTACAT+CGG - chr8_1:13123540-13123559 Msa1179630:three_prime_UTR 15.0%
!! TTTATACTAACAAATTAGTA+TGG - chr8_1:13123807-13123826 Msa1179630:three_prime_UTR 15.0%
!!! TCATTTTCTTATATTATTGT+TGG - chr8_1:13124206-13124225 Msa1179630:three_prime_UTR 15.0%
!!! CATTTTCTTATATTATTGTT+GGG - chr8_1:13124207-13124226 Msa1179630:three_prime_UTR 15.0%
!! ATATATCTATATTTAGGAAT+TGG + chr8_1:13124534-13124553 None:intergenic 15.0%
!! AGTACTATATATCTATATTT+AGG + chr8_1:13124540-13124559 None:intergenic 15.0%
!! TAAATATAGATATATAGTAC+TGG - chr8_1:13124539-13124558 Msa1179630:three_prime_UTR 15.0%
!! CAACTGTTTATTATATTTAA+TGG - chr8_1:13124936-13124955 Msa1179630:intron 15.0%
!! AGTTTATTTATTGAAAACAT+TGG - chr8_1:13125221-13125240 Msa1179630:intron 15.0%
!! TATAATTAATGTTCGATTTA+AGG + chr8_1:13125550-13125569 None:intergenic 15.0%
!!! TCTACATTTTTTTATATGAT+TGG - chr8_1:13126632-13126651 Msa1179630:intron 15.0%
!! TAAAATCATATTAATGATGA+AGG - chr8_1:13127225-13127244 Msa1179630:intron 15.0%
!!! GATTTTCTTTTGATAAGTTT+CGG - chr8_1:13120992-13121011 Msa1179630:three_prime_UTR 20.0%
!! TGGATAGTATTCATTAAAAA+GGG + chr8_1:13121641-13121660 None:intergenic 20.0%
!! AAATTTATGAGACCAAAAAT+AGG + chr8_1:13121699-13121718 None:intergenic 20.0%
!!! TGTAACTTCATAATACATTT+TGG - chr8_1:13121835-13121854 Msa1179630:intron 20.0%
!! ACAGAATTACAAATTATATG+CGG + chr8_1:13121917-13121936 None:intergenic 20.0%
!!! ATTTCATATCGCTAAATTTT+GGG + chr8_1:13122090-13122109 None:intergenic 20.0%
!! GATTACAAAAACAAAATGAA+AGG + chr8_1:13122592-13122611 None:intergenic 20.0%
!!! AATTTCTGATATAGTCTTTT+AGG + chr8_1:13122877-13122896 None:intergenic 20.0%
!! TTCTTGAATAATCATATGTT+TGG - chr8_1:13123082-13123101 Msa1179630:intron 20.0%
!!! TTATAAATGTTGGTTTGAAT+TGG - chr8_1:13123163-13123182 Msa1179630:intron 20.0%
!!! TTTTGTAGTTTCCTTAATTT+AGG + chr8_1:13123449-13123468 None:intergenic 20.0%
!! GTCTATCAATTATAAATGAT+TGG - chr8_1:13123900-13123919 Msa1179630:three_prime_UTR 20.0%
!! AATTATAAATGATTGGAACA+GGG - chr8_1:13123907-13123926 Msa1179630:three_prime_UTR 20.0%
!!! TTAGTTTTGAATTATTGTTG+AGG + chr8_1:13124038-13124057 None:intergenic 20.0%
!!! TAATGTCTTCAAGTTTATTT+TGG - chr8_1:13124055-13124074 Msa1179630:three_prime_UTR 20.0%
!!! AAGAAACAGAATTTGAAATT+TGG - chr8_1:13124094-13124113 Msa1179630:three_prime_UTR 20.0%
!!! AGAAACAGAATTTGAAATTT+GGG - chr8_1:13124095-13124114 Msa1179630:three_prime_UTR 20.0%
!! TAACAAAAGATTCAGATTAA+AGG - chr8_1:13124277-13124296 Msa1179630:three_prime_UTR 20.0%
!! AAAATTACACTGTAAATGTA+AGG + chr8_1:13124750-13124769 None:intergenic 20.0%
!!! TATTTAATTTTTACCAGTCA+TGG - chr8_1:13125576-13125595 Msa1179630:intron 20.0%
!!! TATTGACAATGATTTCTTTT+CGG + chr8_1:13125666-13125685 None:intergenic 20.0%
!!! TCTACAATATTTTTCACATT+AGG + chr8_1:13125789-13125808 None:intergenic 20.0%
!!! ATTGAACTTATAATTTTCCT+TGG + chr8_1:13125921-13125940 None:intergenic 20.0%
!! TATAAGTTCAATCATTATGA+AGG - chr8_1:13125929-13125948 Msa1179630:intron 20.0%
!! GAAGTCAAATATATATATCA+GGG + chr8_1:13126403-13126422 None:intergenic 20.0%
!! AGAAGTCAAATATATATATC+AGG + chr8_1:13126404-13126423 None:intergenic 20.0%
!! AAAGTTAATTGATACCAATA+TGG + chr8_1:13126605-13126624 None:intergenic 20.0%
!! ACTTTGGATATGAAATTATT+TGG + chr8_1:13127115-13127134 None:intergenic 20.0%
!! ATTTAACTGTATCAAAGAAA+AGG + chr8_1:13127141-13127160 None:intergenic 20.0%
!!! TTTTCTTTGATACAGTTAAA+TGG - chr8_1:13127140-13127159 Msa1179630:intron 20.0%
!!! ATTATTTGAGACATGAATAT+TGG - chr8_1:13127393-13127412 Msa1179630:intron 20.0%
!! TATATGTTGTAGATCATAAT+AGG - chr8_1:13127696-13127715 Msa1179630:CDS 20.0%
!!! AATGCATCTAAAATATTAAG+TGG + chr8_1:13127784-13127803 None:intergenic 20.0%
!!! TTACTCAACAACTATATTTT+TGG - chr8_1:13127838-13127857 Msa1179630:CDS 20.0%
!!! TACTCAACAACTATATTTTT+GGG - chr8_1:13127839-13127858 Msa1179630:CDS 20.0%
!! CTATGTTTTTCATATTTGTG+TGG - chr8_1:13121229-13121248 Msa1179630:intron 25.0%
!!! GTTTTAGTTGGCATTTATAT+TGG - chr8_1:13121302-13121321 Msa1179630:intron 25.0%
!!! GAGTTTAATTTTGATACACT+CGG - chr8_1:13121324-13121343 Msa1179630:intron 25.0%
! TGATGTTTACGATTTATTGA+TGG - chr8_1:13121443-13121462 Msa1179630:intron 25.0%
! ATCACAAACAACACTAAAAA+GGG + chr8_1:13121524-13121543 None:intergenic 25.0%
!!! ATCGTTATATGTTTTGAAAC+AGG - chr8_1:13121570-13121589 Msa1179630:intron 25.0%
! AGGTATAATAAAAGTCTGTT+GGG - chr8_1:13121590-13121609 Msa1179630:three_prime_UTR 25.0%
! GTGGATAGTATTCATTAAAA+AGG + chr8_1:13121642-13121661 None:intergenic 25.0%
!! CGAAATTTATCACCTATTTT+TGG - chr8_1:13121684-13121703 Msa1179630:three_prime_UTR 25.0%
!!! TGGTATTCTATGTTTTAACT+TGG - chr8_1:13121776-13121795 Msa1179630:intron 25.0%
!! GCATATAATTTGTAATTCTG+TGG - chr8_1:13121916-13121935 Msa1179630:three_prime_UTR 25.0%
! ATTAAGATTCTAATGTTACG+TGG - chr8_1:13121989-13122008 Msa1179630:intron 25.0%
!! CATTTCATATCGCTAAATTT+TGG + chr8_1:13122091-13122110 None:intergenic 25.0%
!!! TGTTTTAACAATAGGTTGAT+TGG - chr8_1:13122109-13122128 Msa1179630:three_prime_UTR 25.0%
!! GTTAGTTGTTTCCTTAAAAA+TGG + chr8_1:13122470-13122489 None:intergenic 25.0%
! AAAGGAAAGGTAAATAAAGA+GGG + chr8_1:13122501-13122520 None:intergenic 25.0%
! AAAAGGAAAGGTAAATAAAG+AGG + chr8_1:13122502-13122521 None:intergenic 25.0%
! GATTTACACTGCAAAATAAA+AGG + chr8_1:13122519-13122538 None:intergenic 25.0%
!! ATTCCTGATAGTTTAAAACT+TGG + chr8_1:13123202-13123221 None:intergenic 25.0%
! ATAGAGAATCTTAAAAAGGA+GGG + chr8_1:13123590-13123609 None:intergenic 25.0%
! TTGGATAGAGAATCTTAAAA+AGG + chr8_1:13123594-13123613 None:intergenic 25.0%
! TAACTTTCTTACTACTGTAA+GGG + chr8_1:13123622-13123641 None:intergenic 25.0%
! ATAACTTTCTTACTACTGTA+AGG + chr8_1:13123623-13123642 None:intergenic 25.0%
! CAATTATAAATGATTGGAAC+AGG - chr8_1:13123906-13123925 Msa1179630:three_prime_UTR 25.0%
!! GAAACAGAATTTGAAATTTG+GGG - chr8_1:13124096-13124115 Msa1179630:three_prime_UTR 25.0%
!!! ATTCAGATTAAAGGTTTTGT+TGG - chr8_1:13124286-13124305 Msa1179630:three_prime_UTR 25.0%
!!! ACAATTTGCATTTTTCAGAA+GGG + chr8_1:13124412-13124431 None:intergenic 25.0%
! TATATTTAGGAATTGGAACT+AGG + chr8_1:13124527-13124546 None:intergenic 25.0%
!!! GTTTTGGGATTTTAATTTGT+TGG + chr8_1:13124672-13124691 None:intergenic 25.0%
!! AGGATTCTTTCTTTTCAATT+TGG + chr8_1:13125176-13125195 None:intergenic 25.0%
! ATTGAAAAGAAAGAATCCTA+TGG - chr8_1:13125177-13125196 Msa1179630:intron 25.0%
! AATAAACTATTACATGTGCA+AGG + chr8_1:13125209-13125228 None:intergenic 25.0%
! GGTATTGTTAGATTTAGATT+AGG - chr8_1:13125242-13125261 Msa1179630:intron 25.0%
! AGCAAGTTATAACTAAAAAG+TGG - chr8_1:13125335-13125354 Msa1179630:intron 25.0%
! AATACTCAATATCTGTTAAG+AGG - chr8_1:13125885-13125904 Msa1179630:intron 25.0%
! TCAATCATTATGAAGGATTT+AGG - chr8_1:13125936-13125955 Msa1179630:intron 25.0%
!!! TATCAAAGTACTCATTTTCT+CGG + chr8_1:13126300-13126319 None:intergenic 25.0%
! ATAAACTCCTACCATAAAAA+AGG + chr8_1:13126377-13126396 None:intergenic 25.0%
!!! ACCTTATTTTGTTGTGTTTA+CGG - chr8_1:13126440-13126459 Msa1179630:intron 25.0%
! TTATATCTTTATCTTCTTGC+AGG - chr8_1:13126501-13126520 Msa1179630:intron 25.0%
! AGATCATCATACAAAAGATT+CGG - chr8_1:13127023-13127042 Msa1179630:intron 25.0%
! TGAAATTATTTGGTCCATAT+AGG + chr8_1:13127105-13127124 None:intergenic 25.0%
! AATCATATTAATGATGAAGG+CGG - chr8_1:13127228-13127247 Msa1179630:intron 25.0%
!!! TACCTTTTTTACAATTAGCA+AGG - chr8_1:13127278-13127297 Msa1179630:intron 25.0%
!!! ACCTTTTTTACAATTAGCAA+GGG - chr8_1:13127279-13127298 Msa1179630:intron 25.0%
! AATAATGAACTGATGTTACA+TGG + chr8_1:13127323-13127342 None:intergenic 25.0%
! TGAATTGATGTTACATTACA+TGG + chr8_1:13127374-13127393 None:intergenic 25.0%
!! AGTTTATTGACTGAGAATTA+TGG + chr8_1:13127474-13127493 None:intergenic 25.0%
!! GATTATTCAGTTACAGATTT+TGG - chr8_1:13127652-13127671 Msa1179630:CDS 25.0%
!!! ACTCAACAACTATATTTTTG+GGG - chr8_1:13127840-13127859 Msa1179630:CDS 25.0%
!!! TATTTTTGGGGAAAAAATGT+TGG - chr8_1:13127852-13127871 Msa1179630:CDS 25.0%
!! GCTATTGATGATTTTGATAG+TGG - chr8_1:13120772-13120791 Msa1179630:three_prime_UTR 30.0%
! GTGATTTTGGATCAGAAATT+AGG - chr8_1:13120877-13120896 Msa1179630:three_prime_UTR 30.0%
! ACCTCATTCTTTTCAACAAA+AGG + chr8_1:13120946-13120965 None:intergenic 30.0%
! TTCTTTTGATAAGTTTCGGA+AGG - chr8_1:13120996-13121015 Msa1179630:three_prime_UTR 30.0%
ACACTGTCTTCAATATCAAA+AGG + chr8_1:13121105-13121124 None:intergenic 30.0%
! ATATTGAAGACAGTGTTGAA+AGG - chr8_1:13121109-13121128 Msa1179630:three_prime_UTR 30.0%
! TATTGAAGACAGTGTTGAAA+GGG - chr8_1:13121110-13121129 Msa1179630:three_prime_UTR 30.0%
CAAGGTCAAAAATAAACTGA+AGG + chr8_1:13121259-13121278 None:intergenic 30.0%
!!! TTTACACTGTTGGTTTTAGT+TGG - chr8_1:13121290-13121309 Msa1179630:intron 30.0%
CATCACAAACAACACTAAAA+AGG + chr8_1:13121525-13121544 None:intergenic 30.0%
CAGGTATAATAAAAGTCTGT+TGG - chr8_1:13121589-13121608 Msa1179630:three_prime_UTR 30.0%
TATTCATTAAAAAGGGAGCT+GGG + chr8_1:13121634-13121653 None:intergenic 30.0%
! TTGTTACTTGTTGAGTGTTA+TGG - chr8_1:13121879-13121898 Msa1179630:three_prime_UTR 30.0%
GAGATAAAAACCACAGAAAA+CGG + chr8_1:13122140-13122159 None:intergenic 30.0%
!! CTACATTTGCTCCATTTTTA+AGG - chr8_1:13122456-13122475 Msa1179630:three_prime_UTR 30.0%
AAGGAAAGGTAAATAAAGAG+GGG + chr8_1:13122500-13122519 None:intergenic 30.0%
ACACTGCAAAATAAAAGGAA+AGG + chr8_1:13122514-13122533 None:intergenic 30.0%
TGCATTGCTAGGATAATTTA+TGG - chr8_1:13122668-13122687 Msa1179630:intron 30.0%
GCATTGCTAGGATAATTTAT+GGG - chr8_1:13122669-13122688 Msa1179630:intron 30.0%
! AAGACAATAGGTGTTCTTTT+TGG - chr8_1:13122749-13122768 Msa1179630:intron 30.0%
CTTTACAATGCAAGAAATTG+TGG - chr8_1:13122902-13122921 Msa1179630:intron 30.0%
AACACAAACTAATATTCGAG+AGG + chr8_1:13123116-13123135 None:intergenic 30.0%
!! AAATGTTGGTTTGAATTGGA+AGG - chr8_1:13123167-13123186 Msa1179630:intron 30.0%
!!! GTACCAAGTTTTAAACTATC+AGG - chr8_1:13123196-13123215 Msa1179630:intron 30.0%
!! ATCATTTTAGTCATCTCCAT+CGG - chr8_1:13123220-13123239 Msa1179630:intron 30.0%
AAATTGAAAGAACAGCATGA+TGG + chr8_1:13123518-13123537 None:intergenic 30.0%
! ATCTTAAAAAGGAGGGTTTT+TGG + chr8_1:13123583-13123602 None:intergenic 30.0%
GATAGAGAATCTTAAAAAGG+AGG + chr8_1:13123591-13123610 None:intergenic 30.0%
TGATTCCTGATAGGATATAA+TGG + chr8_1:13123718-13123737 None:intergenic 30.0%
TATCAAACATGATTCCTGAT+AGG + chr8_1:13123727-13123746 None:intergenic 30.0%
GAATCATGTTTGATATCCAA+AGG - chr8_1:13123732-13123751 Msa1179630:three_prime_UTR 30.0%
TAAGCTCTTCATATTCTTGT+TGG - chr8_1:13123872-13123891 Msa1179630:three_prime_UTR 30.0%
! TTAATATTCTAGAGAGCCAT+GGG + chr8_1:13123984-13124003 None:intergenic 30.0%
! TTTAATATTCTAGAGAGCCA+TGG + chr8_1:13123985-13124004 None:intergenic 30.0%
GCATATATAATACCTGCAAA+AGG + chr8_1:13124182-13124201 None:intergenic 30.0%
!! CAATTTGCATTTTTCAGAAG+GGG + chr8_1:13124411-13124430 None:intergenic 30.0%
!! CACAATTTGCATTTTTCAGA+AGG + chr8_1:13124413-13124432 None:intergenic 30.0%
CAATCATGTTTCTCATTTGT+CGG + chr8_1:13124643-13124662 None:intergenic 30.0%
TTGTTGATCCATAAGAAACA+AGG - chr8_1:13124714-13124733 Msa1179630:intron 30.0%
TGTTGATCCATAAGAAACAA+GGG - chr8_1:13124715-13124734 Msa1179630:intron 30.0%
! GTTTTCGTTGCTATGTTTAA+CGG - chr8_1:13124799-13124818 Msa1179630:intron 30.0%
TGAATGTGAAAAGGTAAAAG+TGG - chr8_1:13124859-13124878 Msa1179630:intron 30.0%
CAATAAATAAGAGTTCTCAC+CGG - chr8_1:13124985-13125004 Msa1179630:intron 30.0%
! ACATTCTTGCTTCATTTTCT+TGG - chr8_1:13125108-13125127 Msa1179630:intron 30.0%
! CATTCTTGCTTCATTTTCTT+GGG - chr8_1:13125109-13125128 Msa1179630:intron 30.0%
! ACACCAACTAATTTTTGTGA+AGG - chr8_1:13125304-13125323 Msa1179630:intron 30.0%
ACACCTTCACAAAAATTAGT+TGG + chr8_1:13125310-13125329 None:intergenic 30.0%
!!! TATATTTTTTCTGCTGCCTT+TGG - chr8_1:13125515-13125534 Msa1179630:intron 30.0%
TTTAAGGATTGATTGACCAA+AGG + chr8_1:13125534-13125553 None:intergenic 30.0%
TGTTCTATGGAACTAAATGT+TGG - chr8_1:13125629-13125648 Msa1179630:intron 30.0%
GTTCTATGGAACTAAATGTT+GGG - chr8_1:13125630-13125649 Msa1179630:intron 30.0%
! AGTTTTGCCTTAGATGATTT+AGG - chr8_1:13125808-13125827 Msa1179630:intron 30.0%
! GGATTTAGGTTTAAAATGTC+TGG - chr8_1:13125950-13125969 Msa1179630:intron 30.0%
TGTTAAACATGATTTACGAC+AGG - chr8_1:13125973-13125992 Msa1179630:intron 30.0%
AAAGATAGTGCTATCTACAA+AGG + chr8_1:13126091-13126110 None:intergenic 30.0%
TACAAGTAGAAGATAAACAC+AGG + chr8_1:13126131-13126150 None:intergenic 30.0%
!!! ATACTTTTTCCAATGACTTC+AGG - chr8_1:13126178-13126197 Msa1179630:intron 30.0%
! ATGAGTACTTTGATAGTTCA+TGG - chr8_1:13126305-13126324 Msa1179630:intron 30.0%
ACCGTAAACACAACAAAATA+AGG + chr8_1:13126444-13126463 None:intergenic 30.0%
AATTGATACCAATATGGTGA+CGG + chr8_1:13126599-13126618 None:intergenic 30.0%
!! TTTTTATATGATTGGTCCAG+TGG - chr8_1:13126640-13126659 Msa1179630:intron 30.0%
! TAAAGCACTATACGAGTAAT+AGG + chr8_1:13126670-13126689 None:intergenic 30.0%
AATAATCTAGATTCATGCTC+AGG - chr8_1:13126695-13126714 Msa1179630:intron 30.0%
CCAGAACATTAAGTTCAATA+TGG + chr8_1:13126729-13126748 None:intergenic 30.0%
CCATATTGAACTTAATGTTC+TGG - chr8_1:13126726-13126745 Msa1179630:intron 30.0%
TTTACTTGGTTGAAAGGATT+TGG - chr8_1:13126797-13126816 Msa1179630:intron 30.0%
ATTTGGCCTATTCACTATTA+TGG - chr8_1:13126814-13126833 Msa1179630:intron 30.0%
AACCTGTTCACTTAAATGTT+TGG - chr8_1:13126958-13126977 Msa1179630:intron 30.0%
AACCAAACATTTAAGTGAAC+AGG + chr8_1:13126963-13126982 None:intergenic 30.0%
AGCCAAATATGTTATTCTTG+AGG - chr8_1:13127047-13127066 Msa1179630:intron 30.0%
CTCCTCAAGAATAACATATT+TGG + chr8_1:13127052-13127071 None:intergenic 30.0%
ATATGTTATTCTTGAGGAGA+TGG - chr8_1:13127053-13127072 Msa1179630:intron 30.0%
ATCAAAGAAAAGGCTTACTT+TGG + chr8_1:13127131-13127150 None:intergenic 30.0%
ATCATATTAATGATGAAGGC+GGG - chr8_1:13127229-13127248 Msa1179630:intron 30.0%
TCCCTTGCTAATTGTAAAAA+AGG + chr8_1:13127283-13127302 None:intergenic 30.0%
ATCAGTTCATTATTTGAGCA+AGG - chr8_1:13127329-13127348 Msa1179630:intron 30.0%
TCAGTTCATTATTTGAGCAA+GGG - chr8_1:13127330-13127349 Msa1179630:intron 30.0%
TTTCTTACCAATACAGTGAT+TGG - chr8_1:13127809-13127828 Msa1179630:CDS 30.0%
! GGATACAATACAAGTTTGTT+TGG + chr8_1:13127919-13127938 None:intergenic 30.0%
!! TCAGAGAGTTGTAGCTTTAA+AGG - chr8_1:13120745-13120764 Msa1179630:three_prime_UTR 35.0%
!! CAGAGAGTTGTAGCTTTAAA+GGG - chr8_1:13120746-13120765 Msa1179630:three_prime_UTR 35.0%
!!! GATTTTGATAGTGGAAGTTC+AGG - chr8_1:13120781-13120800 Msa1179630:three_prime_UTR 35.0%
! GCCTTTTGTTGAAAAGAATG+AGG - chr8_1:13120942-13120961 Msa1179630:three_prime_UTR 35.0%
!!! TGCAAGGAAGAGTTTTAGAT+AGG - chr8_1:13120965-13120984 Msa1179630:three_prime_UTR 35.0%
!!! GCAAGGAAGAGTTTTAGATA+GGG - chr8_1:13120966-13120985 Msa1179630:three_prime_UTR 35.0%
TTGATAAGTTTCGGAAGGAA+AGG - chr8_1:13121001-13121020 Msa1179630:three_prime_UTR 35.0%
TGGACGATGATTCTGTTTAT+AGG - chr8_1:13121052-13121071 Msa1179630:three_prime_UTR 35.0%
GATGATTCTGTTTATAGGAG+AGG - chr8_1:13121057-13121076 Msa1179630:three_prime_UTR 35.0%
TCTGTTTATAGGAGAGGTAA+TGG - chr8_1:13121063-13121082 Msa1179630:three_prime_UTR 35.0%
! ATTGAAGACAGTGTTGAAAG+GGG - chr8_1:13121111-13121130 Msa1179630:three_prime_UTR 35.0%
! GTCTTCAAGATATTTGCTAC+AGG + chr8_1:13121210-13121229 None:intergenic 35.0%
TAAAACCAACAGTGTAAACG+AGG + chr8_1:13121288-13121307 None:intergenic 35.0%
GATAAGAGACGAAGCATAAA+AGG + chr8_1:13121553-13121572 None:intergenic 35.0%
GTATTCATTAAAAAGGGAGC+TGG + chr8_1:13121635-13121654 None:intergenic 35.0%
TATCCACTTTGTAATGCAAG+CGG - chr8_1:13121655-13121674 Msa1179630:three_prime_UTR 35.0%
AGACTAATGTTGTCATGTCT+TGG - chr8_1:13121720-13121739 Msa1179630:intron 35.0%
TAATGTTGTCATGTCTTGGA+GGG - chr8_1:13121724-13121743 Msa1179630:intron 35.0%
TGCGAGGTAAATTTCATTCT+TGG - chr8_1:13121756-13121775 Msa1179630:intron 35.0%
! TTTGCCTCATTTTCCATGTT+TGG + chr8_1:13122016-13122035 None:intergenic 35.0%
GAAAATGAGGCAAATAGACT+AGG - chr8_1:13122022-13122041 Msa1179630:intron 35.0%
CTCTCACTCTTATGATTATG+TGG - chr8_1:13122045-13122064 Msa1179630:intron 35.0%
!! CGCTAAATTTTGGGTGAAAA+TGG + chr8_1:13122081-13122100 None:intergenic 35.0%
! TTGCATAAAAGTGTGCTTCA+GGG + chr8_1:13122195-13122214 None:intergenic 35.0%
! TTTGCATAAAAGTGTGCTTC+AGG + chr8_1:13122196-13122215 None:intergenic 35.0%
ATATCAACTAATGCCACAGA+TGG - chr8_1:13122254-13122273 Msa1179630:intron 35.0%
! ACATTTGCTACAATGGTTTG+TGG - chr8_1:13122364-13122383 Msa1179630:three_prime_UTR 35.0%
! TGGTAATGTTACATCAGAAC+CGG - chr8_1:13122430-13122449 Msa1179630:three_prime_UTR 35.0%
AAAGGTAAATAAAGAGGGGA+AGG + chr8_1:13122496-13122515 None:intergenic 35.0%
!! TCTTGTTTGCTTTTGCTTTC+CGG - chr8_1:13122559-13122578 Msa1179630:intron 35.0%
CAAAATGAAAGGAAACTCAC+CGG + chr8_1:13122581-13122600 None:intergenic 35.0%
TGCATATCTCAGAAGACAAT+AGG - chr8_1:13122737-13122756 Msa1179630:intron 35.0%
AGGCATCATAGATGAGAATT+GGG + chr8_1:13122857-13122876 None:intergenic 35.0%
TAGGCATCATAGATGAGAAT+TGG + chr8_1:13122858-13122877 None:intergenic 35.0%
!! ACCTAAAAGTGCTGTTAGAA+TGG - chr8_1:13122962-13122981 Msa1179630:intron 35.0%
!!! TTCATGCTGCTTTGTGATTT+TGG - chr8_1:13123059-13123078 Msa1179630:intron 35.0%
!! ATGTACATTGATTCGCACTT+AGG - chr8_1:13123303-13123322 Msa1179630:intron 35.0%
! TACTTCTGTAGGGTATCTTT+GGG - chr8_1:13123383-13123402 Msa1179630:intron 35.0%
!! TAAAAAGGAGGGTTTTTGGA+GGG + chr8_1:13123579-13123598 None:intergenic 35.0%
!! TTAAAAAGGAGGGTTTTTGG+AGG + chr8_1:13123580-13123599 None:intergenic 35.0%
CAACTCCATTATATCCTATC+AGG - chr8_1:13123710-13123729 Msa1179630:three_prime_UTR 35.0%
!!! CTGTCTGTATGCTACTTTTT+TGG + chr8_1:13123771-13123790 None:intergenic 35.0%
TTATTGCCTGTTCGAAATTC+TGG + chr8_1:13123855-13123874 None:intergenic 35.0%
! CGTTAGTTATTCTTTTCCCA+TGG - chr8_1:13123965-13123984 Msa1179630:three_prime_UTR 35.0%
AAGTGCATTGTTCAAGCTTT+AGG - chr8_1:13124004-13124023 Msa1179630:three_prime_UTR 35.0%
ATAATGCAGATCTTACACGA+GGG + chr8_1:13124479-13124498 None:intergenic 35.0%
AATAATGCAGATCTTACACG+AGG + chr8_1:13124480-13124499 None:intergenic 35.0%
TCGTGTAAGATCTGCATTAT+TGG - chr8_1:13124479-13124498 Msa1179630:three_prime_UTR 35.0%
GAACAAAGCGATTAAACTGT+AGG + chr8_1:13124585-13124604 None:intergenic 35.0%
!! TGACAACTTTGAAGGGTTTT+GGG + chr8_1:13124687-13124706 None:intergenic 35.0%
!! TTGACAACTTTGAAGGGTTT+TGG + chr8_1:13124688-13124707 None:intergenic 35.0%
GTTGATCCATAAGAAACAAG+GGG - chr8_1:13124716-13124735 Msa1179630:intron 35.0%
TTGATCCATAAGAAACAAGG+GGG - chr8_1:13124717-13124736 Msa1179630:intron 35.0%
! AATTTCCCCCTTGTTTCTTA+TGG + chr8_1:13124725-13124744 None:intergenic 35.0%
TCACATTCACTTCTATGCTT+CGG + chr8_1:13124848-13124867 None:intergenic 35.0%
GCATAGAAGTGAATGTGAAA+AGG - chr8_1:13124850-13124869 Msa1179630:intron 35.0%
GGTAAAAGTGGAGAACAATT+TGG - chr8_1:13124871-13124890 Msa1179630:intron 35.0%
AAAAGTGGAGAACAATTTGG+TGG - chr8_1:13124874-13124893 Msa1179630:intron 35.0%
ACAATAATAGGGATCGTATC+CGG + chr8_1:13125007-13125026 None:intergenic 35.0%
TTTGTGTGTGTATGTGTAGA+TGG + chr8_1:13125048-13125067 None:intergenic 35.0%
CAAATGGCAATAGGATAACT+TGG + chr8_1:13125277-13125296 None:intergenic 35.0%
! GTCTTTTAGCAAATGGCAAT+AGG + chr8_1:13125286-13125305 None:intergenic 35.0%
!! AGTTGGTGTCTTTTAGCAAA+TGG + chr8_1:13125293-13125312 None:intergenic 35.0%
TTGCTAAAAGACACCTCTAA+AGG - chr8_1:13125381-13125400 Msa1179630:intron 35.0%
TGCTAAAAGACACCTCTAAA+GGG - chr8_1:13125382-13125401 Msa1179630:intron 35.0%
ATAAGACTGGCAATGTTCTA+TGG - chr8_1:13125616-13125635 Msa1179630:intron 35.0%
! TAAGAGGTATAGAAAGACCA+AGG - chr8_1:13125901-13125920 Msa1179630:intron 35.0%
GATAAACACAGGCAAAGAAA+AGG + chr8_1:13126120-13126139 None:intergenic 35.0%
!! TTTTTCAGACCTGAAGTCAT+TGG + chr8_1:13126190-13126209 None:intergenic 35.0%
TAATGCAAGAGAAAGAAGTG+CGG + chr8_1:13126260-13126279 None:intergenic 35.0%
TTTCTCTTGCATTAGATCCT+TGG - chr8_1:13126266-13126285 Msa1179630:intron 35.0%
TTCTCTTGCATTAGATCCTT+GGG - chr8_1:13126267-13126286 Msa1179630:intron 35.0%
AGTTTCTTGCTGATGTTCTT+TGG - chr8_1:13126340-13126359 Msa1179630:three_prime_UTR 35.0%
!!! TGGAACACTTGCCTTTTTTA+TGG - chr8_1:13126363-13126382 Msa1179630:three_prime_UTR 35.0%
!!! ACACTTGCCTTTTTTATGGT+AGG - chr8_1:13126367-13126386 Msa1179630:three_prime_UTR 35.0%
ACTTTCATGATGCGTTTACT+TGG - chr8_1:13126783-13126802 Msa1179630:intron 35.0%
CACCAACCATAATAGTGAAT+AGG + chr8_1:13126823-13126842 None:intergenic 35.0%
CTTCAATATTCACGTGATTC+AGG + chr8_1:13127526-13127545 None:intergenic 35.0%
CTGAATCACGTGAATATTGA+AGG - chr8_1:13127524-13127543 Msa1179630:CDS 35.0%
AAGCAATGATTTCGAAGAAG+AGG - chr8_1:13127550-13127569 Msa1179630:CDS 35.0%
AGCAATGATTTCGAAGAAGA+GGG - chr8_1:13127551-13127570 Msa1179630:CDS 35.0%
GGACACAAAAATATCTTCCA+GGG - chr8_1:13127572-13127591 Msa1179630:CDS 35.0%
ACCAATACAGTGATTGGTAA+TGG - chr8_1:13127815-13127834 Msa1179630:CDS 35.0%
ACCATTACCAATCACTGTAT+TGG + chr8_1:13127819-13127838 None:intergenic 35.0%
!! TTTTGGGGAAAAAATGTTGG+AGG - chr8_1:13127855-13127874 Msa1179630:CDS 35.0%
TTTGGGGAAAAAATGTTGGA+GGG - chr8_1:13127856-13127875 Msa1179630:CDS 35.0%
GGTCAATTTCGTTGTTACAT+TGG - chr8_1:13127877-13127896 Msa1179630:CDS 35.0%
!! ACAAGTTTGTTTGGTGTTGA+AGG + chr8_1:13127910-13127929 None:intergenic 35.0%
! TGTGACGACGATGATAATGA+TGG - chr8_1:13120841-13120860 Msa1179630:three_prime_UTR 40.0%
!! GATGATAATGATGGTGGTGA+TGG - chr8_1:13120850-13120869 Msa1179630:three_prime_UTR 40.0%
!! ATAATGATGGTGGTGATGGA+AGG - chr8_1:13120854-13120873 Msa1179630:three_prime_UTR 40.0%
!! TAATGATGGTGGTGATGGAA+GGG - chr8_1:13120855-13120874 Msa1179630:three_prime_UTR 40.0%
GGATCAGAAATTAGGTGATG+AGG - chr8_1:13120885-13120904 Msa1179630:three_prime_UTR 40.0%
GTTGAAAAGAATGAGGTGCA+AGG - chr8_1:13120949-13120968 Msa1179630:three_prime_UTR 40.0%
ATCGTACTAGCACCATTCAT+CGG + chr8_1:13121033-13121052 None:intergenic 40.0%
GTGTAAACGAGGAACTTACA+AGG + chr8_1:13121277-13121296 None:intergenic 40.0%
AAGTTCCTCGTTTACACTGT+TGG - chr8_1:13121280-13121299 Msa1179630:intron 40.0%
AAGTCTGTTGGGAGATCATA+TGG - chr8_1:13121601-13121620 Msa1179630:three_prime_UTR 40.0%
AGTCTGTTGGGAGATCATAT+GGG - chr8_1:13121602-13121621 Msa1179630:three_prime_UTR 40.0%
CTAATGTTGTCATGTCTTGG+AGG - chr8_1:13121723-13121742 Msa1179630:intron 40.0%
!!! TGGAGGGATTATTTTTTGCG+AGG - chr8_1:13121740-13121759 Msa1179630:intron 40.0%
AATGTTACGTGGTCCAAACA+TGG - chr8_1:13122000-13122019 Msa1179630:intron 40.0%
TGGTCCAAACATGGAAAATG+AGG - chr8_1:13122009-13122028 Msa1179630:intron 40.0%
! CTCTGTCACATTTGCTACAA+TGG - chr8_1:13122357-13122376 Msa1179630:three_prime_UTR 40.0%
AATGGAGCAAATGTAGAGTC+CGG + chr8_1:13122452-13122471 None:intergenic 40.0%
GCAAACAAGAGGAGAAAGAT+TGG + chr8_1:13122549-13122568 None:intergenic 40.0%
GGAAAGCAAAAGCAAACAAG+AGG + chr8_1:13122560-13122579 None:intergenic 40.0%
ATTTAAGGAGCTGCATTGCT+AGG - chr8_1:13122657-13122676 Msa1179630:intron 40.0%
TGGGAGCGATTAATGCATAA+AGG - chr8_1:13122688-13122707 Msa1179630:intron 40.0%
! GCCATTCTAACAGCACTTTT+AGG + chr8_1:13122966-13122985 None:intergenic 40.0%
!! GTTGGTTTGAATTGGAAGGT+TGG - chr8_1:13123171-13123190 Msa1179630:intron 40.0%
TTCAAAAGATCAAGCCAGCA+TGG - chr8_1:13123328-13123347 Msa1179630:intron 40.0%
AGGTACATCTGTACTTCTGT+AGG - chr8_1:13123372-13123391 Msa1179630:intron 40.0%
GGTACATCTGTACTTCTGTA+GGG - chr8_1:13123373-13123392 Msa1179630:intron 40.0%
! GTACTTCTGTAGGGTATCTT+TGG - chr8_1:13123382-13123401 Msa1179630:intron 40.0%
! TATCTTTGGGTGGAGGATTT+TGG - chr8_1:13123396-13123415 Msa1179630:intron 40.0%
TGGATGTCAACAACAACCTT+TGG + chr8_1:13123751-13123770 None:intergenic 40.0%
GTAGCATACAGACAGAAGTT+CGG - chr8_1:13123776-13123795 Msa1179630:three_prime_UTR 40.0%
CAGTTACCAGAATTTCGAAC+AGG - chr8_1:13123846-13123865 Msa1179630:three_prime_UTR 40.0%
! TATGACTCAGATCCTTTTGC+AGG - chr8_1:13124167-13124186 Msa1179630:three_prime_UTR 40.0%
! ATTATTGTTGGGAGCGTATC+TGG - chr8_1:13124218-13124237 Msa1179630:three_prime_UTR 40.0%
TGTAGGAAGGAGGTAAAAGA+GGG + chr8_1:13124353-13124372 None:intergenic 40.0%
ATGTAGGAAGGAGGTAAAAG+AGG + chr8_1:13124354-13124373 None:intergenic 40.0%
AGTCAAGAGATGATGTAGGA+AGG + chr8_1:13124366-13124385 None:intergenic 40.0%
GATGAGTCAAGAGATGATGT+AGG + chr8_1:13124370-13124389 None:intergenic 40.0%
!! TTTGCATTTTTCAGAAGGGG+AGG + chr8_1:13124408-13124427 None:intergenic 40.0%
CCGTGTTTGACAACTTTGAA+GGG + chr8_1:13124694-13124713 None:intergenic 40.0%
CCCTTCAAAGTTGTCAAACA+CGG - chr8_1:13124691-13124710 Msa1179630:intron 40.0%
ACCGTGTTTGACAACTTTGA+AGG + chr8_1:13124695-13124714 None:intergenic 40.0%
AATGTTCAGTTAGCGATAGC+AGG + chr8_1:13125093-13125112 None:intergenic 40.0%
! CTTGCTTCATTTTCTTGGGT+TGG - chr8_1:13125113-13125132 Msa1179630:intron 40.0%
ATGTGCAAGGAACTTACCAT+AGG + chr8_1:13125196-13125215 None:intergenic 40.0%
AAGTGGATAATCACACCTTG+AGG - chr8_1:13125352-13125371 Msa1179630:intron 40.0%
CAAATGCAACAGTTTATGCG+TGG - chr8_1:13125697-13125716 Msa1179630:intron 40.0%
GATAGAAAGTTGAGAGTGAG+AGG - chr8_1:13125758-13125777 Msa1179630:intron 40.0%
GCAAGTGCCTAAATCATCTA+AGG + chr8_1:13125818-13125837 None:intergenic 40.0%
TTGCAAAGAAGACCAGAAGA+AGG - chr8_1:13125834-13125853 Msa1179630:intron 40.0%
!!! AAAGCCTTTTTCAACCACGT+GGG + chr8_1:13126029-13126048 None:intergenic 40.0%
ACATAGCTCATCAAGGTAAG+TGG + chr8_1:13126214-13126233 None:intergenic 40.0%
! TTTTCTCGGAATTCTTCCCA+AGG + chr8_1:13126286-13126305 None:intergenic 40.0%
TTCTTGCTGATGTTCTTTGG+TGG - chr8_1:13126343-13126362 Msa1179630:three_prime_UTR 40.0%
! TATATGATTGGTCCAGTGGA+TGG - chr8_1:13126644-13126663 Msa1179630:intron 40.0%
! GTTTCATGCTGTTTGTGTGT+AGG - chr8_1:13126748-13126767 Msa1179630:intron 40.0%
GATGCGTTTACTTGGTTGAA+AGG - chr8_1:13126791-13126810 Msa1179630:intron 40.0%
GGCCTATTCACTATTATGGT+TGG - chr8_1:13126818-13126837 Msa1179630:intron 40.0%
GTGGCATCTGAAAACCTATA+TGG - chr8_1:13127088-13127107 Msa1179630:intron 40.0%
GGGACACAAAAATATCTTCC+AGG - chr8_1:13127571-13127590 Msa1179630:CDS 40.0%
! GACAGAATAGAAGAGAGCAT+TGG + chr8_1:13127623-13127642 None:intergenic 40.0%
!! TTTTGAGAATGTAAGGGGAG+GGG + chr8_1:13127948-13127967 None:intergenic 40.0%
!! CTTTTGAGAATGTAAGGGGA+GGG + chr8_1:13127949-13127968 None:intergenic 40.0%
!! GGAGCTTTTGAGAATGTAAG+GGG + chr8_1:13127953-13127972 None:intergenic 40.0%
!! GGGAGCTTTTGAGAATGTAA+GGG + chr8_1:13127954-13127973 None:intergenic 40.0%
!! GATAGTGGAAGTTCAGGATC+CGG - chr8_1:13120787-13120806 Msa1179630:three_prime_UTR 45.0%
GAAGTTCAGGATCCGGTATT+CGG - chr8_1:13120794-13120813 Msa1179630:three_prime_UTR 45.0%
! GACGACGATGATAATGATGG+TGG - chr8_1:13120844-13120863 Msa1179630:three_prime_UTR 45.0%
!!! TGGTGATGGAAGGGTGATTT+TGG - chr8_1:13120864-13120883 Msa1179630:three_prime_UTR 45.0%
! GATGAATGGTGCTAGTACGA+TGG - chr8_1:13121032-13121051 Msa1179630:three_prime_UTR 45.0%
! AGTGTTGAAAGGGGAACAGT+TGG - chr8_1:13121120-13121139 Msa1179630:three_prime_UTR 45.0%
! TGGTGGTGACTCGTATGATT+CGG - chr8_1:13121140-13121159 Msa1179630:three_prime_UTR 45.0%
GAACCGCTTGCATTACAAAG+TGG + chr8_1:13121661-13121680 None:intergenic 45.0%
!!! ATTGGTTGTGCCGTTTTCTG+TGG - chr8_1:13122127-13122146 Msa1179630:three_prime_UTR 45.0%
TGAAAGGCAAAGTCCATCTG+TGG + chr8_1:13122270-13122289 None:intergenic 45.0%
ATAGCTGTTCCAAGAGCAGT+CGG + chr8_1:13122301-13122320 None:intergenic 45.0%
GGTTTGAATTGGAAGGTTGG+AGG - chr8_1:13123174-13123193 Msa1179630:intron 45.0%
TCCATCGGCATATTACTGAC+AGG - chr8_1:13123235-13123254 Msa1179630:intron 45.0%
ACCTGTCAGTAATATGCCGA+TGG + chr8_1:13123239-13123258 None:intergenic 45.0%
TTCCTACAAGCTCAGTGGTT+AGG - chr8_1:13123352-13123371 Msa1179630:intron 45.0%
TACCTAACCACTGAGCTTGT+AGG + chr8_1:13123357-13123376 None:intergenic 45.0%
! TTCTGTAGGGTATCTTTGGG+TGG - chr8_1:13123386-13123405 Msa1179630:intron 45.0%
! TACTACTGTAAGGGTGTGCT+TGG + chr8_1:13123613-13123632 None:intergenic 45.0%
AGCGATATGGCATGCTAAGA+TGG + chr8_1:13123662-13123681 None:intergenic 45.0%
TTAGCATGCCATATCGCTCT+AGG - chr8_1:13123664-13123683 Msa1179630:three_prime_UTR 45.0%
CAATCCTACCTAGAGCGATA+TGG + chr8_1:13123675-13123694 None:intergenic 45.0%
! CATATCGCTCTAGGTAGGAT+TGG - chr8_1:13123673-13123692 Msa1179630:three_prime_UTR 45.0%
! ATGCTTGCTGCTGTTATGTC+TGG - chr8_1:13124132-13124151 Msa1179630:three_prime_UTR 45.0%
! TGCTTGCTGCTGTTATGTCT+GGG - chr8_1:13124133-13124152 Msa1179630:three_prime_UTR 45.0%
TAAGAGGAAGAATTGAGCGG+AGG + chr8_1:13124330-13124349 None:intergenic 45.0%
GGGTAAGAGGAAGAATTGAG+CGG + chr8_1:13124333-13124352 None:intergenic 45.0%
AGGAGGTAAAAGAGGGTAAG+AGG + chr8_1:13124346-13124365 None:intergenic 45.0%
CAAGAGATGATGTAGGAAGG+AGG + chr8_1:13124363-13124382 None:intergenic 45.0%
TTCAGAAGGGGAGGAAGATA+GGG + chr8_1:13124399-13124418 None:intergenic 45.0%
TTTCAGAAGGGGAGGAAGAT+AGG + chr8_1:13124400-13124419 None:intergenic 45.0%
ACTAGGCTACCTGTGAAGTA+TGG + chr8_1:13124510-13124529 None:intergenic 45.0%
! AGTGGAGAACAATTTGGTGG+AGG - chr8_1:13124877-13124896 Msa1179630:intron 45.0%
! GTGGAGAACAATTTGGTGGA+GGG - chr8_1:13124878-13124897 Msa1179630:intron 45.0%
! TGGAGAACAATTTGGTGGAG+GGG - chr8_1:13124879-13124898 Msa1179630:intron 45.0%
GATAATCACACCTTGAGGTG+TGG - chr8_1:13125357-13125376 Msa1179630:intron 45.0%
! TTTTAGCAAGCCACACCTCA+AGG + chr8_1:13125370-13125389 None:intergenic 45.0%
TGCTAGAAGACACCCTTTAG+AGG + chr8_1:13125397-13125416 None:intergenic 45.0%
GTGTGGACAAAATCCATGAC+TGG + chr8_1:13125592-13125611 None:intergenic 45.0%
TGTCCACACAGCTATAAGAC+TGG - chr8_1:13125603-13125622 Msa1179630:intron 45.0%
! TTGCCAGTCTTATAGCTGTG+TGG + chr8_1:13125609-13125628 None:intergenic 45.0%
GACCAGAAGAAGGCCTAATA+CGG - chr8_1:13125844-13125863 Msa1179630:intron 45.0%
AGAAGAAGGCCTAATACGGA+CGG - chr8_1:13125848-13125867 Msa1179630:intron 45.0%
TGCGATTTACCGTCCGTATT+AGG + chr8_1:13125860-13125879 None:intergenic 45.0%
TCCATATAACTAACCCCACG+TGG - chr8_1:13126012-13126031 Msa1179630:intron 45.0%
!! ACCACGTGGGGTTAGTTATA+TGG + chr8_1:13126016-13126035 None:intergenic 45.0%
TAACCCCACGTGGTTGAAAA+AGG - chr8_1:13126022-13126041 Msa1179630:intron 45.0%
!!! AAGCCTTTTTCAACCACGTG+GGG + chr8_1:13126028-13126047 None:intergenic 45.0%
!!! CAAAGCCTTTTTCAACCACG+TGG + chr8_1:13126030-13126049 None:intergenic 45.0%
CACAGGCAAAGAAAAGGATC+AGG + chr8_1:13126114-13126133 None:intergenic 45.0%
TGGAGCTACATAGCTCATCA+AGG + chr8_1:13126221-13126240 None:intergenic 45.0%
GAGCTATGTAGCTCCAGTAA+TGG - chr8_1:13126225-13126244 Msa1179630:intron 45.0%
CACAATAGCAGGGGTTGTTA+AGG - chr8_1:13126570-13126589 Msa1179630:intron 45.0%
AATAGCAGGGGTTGTTAAGG+AGG - chr8_1:13126573-13126592 Msa1179630:intron 45.0%
! TGCTGTTTGTGTGTAGGTTG+CGG - chr8_1:13126754-13126773 Msa1179630:intron 45.0%
AGATACCAGAAGCTTCATGC+AGG - chr8_1:13126988-13127007 Msa1179630:intron 45.0%
GAGGAGATGGATGAACAAGA+TGG - chr8_1:13127066-13127085 Msa1179630:intron 45.0%
GAGATGGATGAACAAGATGG+TGG - chr8_1:13127069-13127088 Msa1179630:intron 45.0%
!! TGGCGTTGATGATATGGCTA+AGG + chr8_1:13127603-13127622 None:intergenic 45.0%
!! GAGCATTGGCGTTGATGATA+TGG + chr8_1:13127609-13127628 None:intergenic 45.0%
TTTGAGAATGTAAGGGGAGG+GGG + chr8_1:13127947-13127966 None:intergenic 45.0%
!! GCTTTTGAGAATGTAAGGGG+AGG + chr8_1:13127950-13127969 None:intergenic 45.0%
!! GGGGAGCTTTTGAGAATGTA+AGG + chr8_1:13127955-13127974 None:intergenic 45.0%
!!! ATGAAATAATTTATTTTTTT+TGG - chr8_1:13122410-13122429 Msa1179630:three_prime_UTR 5.0%
!! TATATAAATATACAATAATA+GGG + chr8_1:13125018-13125037 None:intergenic 5.0%
!! ATATATAAATATACAATAAT+AGG + chr8_1:13125019-13125038 None:intergenic 5.0%
!!! ATTGTATTAAAATATTTTTT+TGG - chr8_1:13127758-13127777 Msa1179630:CDS 5.0%
CGAAAGCTCTCTCCGAATAC+CGG + chr8_1:13120809-13120828 None:intergenic 50.0%
! GAGAGCTTTCGTTTTCGCGT+TGG - chr8_1:13120818-13120837 Msa1179630:three_prime_UTR 50.0%
! GAAAGGATCGTGCCGATGAA+TGG - chr8_1:13121018-13121037 Msa1179630:three_prime_UTR 50.0%
GTTGAAAGGGGAACAGTTGG+TGG - chr8_1:13121123-13121142 Msa1179630:three_prime_UTR 50.0%
GGTGGTGACTCGTATGATTC+GGG - chr8_1:13121141-13121160 Msa1179630:three_prime_UTR 50.0%
GTGGTGACTCGTATGATTCG+GGG - chr8_1:13121142-13121161 Msa1179630:three_prime_UTR 50.0%
! TGGTGACTCGTATGATTCGG+GGG - chr8_1:13121143-13121162 Msa1179630:three_prime_UTR 50.0%
TAGCTGTTCCAAGAGCAGTC+GGG + chr8_1:13122300-13122319 None:intergenic 50.0%
GACTGCTCTTGGAACAGCTA+TGG - chr8_1:13122300-13122319 Msa1179630:intron 50.0%
ATGGCTTCCTACAAGCTCAG+TGG - chr8_1:13123347-13123366 Msa1179630:intron 50.0%
! TGTAGGGTATCTTTGGGTGG+AGG - chr8_1:13123389-13123408 Msa1179630:intron 50.0%
! CTTTGGGTGGAGGATTTTGG+AGG - chr8_1:13123399-13123418 Msa1179630:intron 50.0%
!! TGGAGGATTTTGGAGGAGAG+TGG - chr8_1:13123406-13123425 Msa1179630:intron 50.0%
!! GGAGGATTTTGGAGGAGAGT+GGG - chr8_1:13123407-13123426 Msa1179630:intron 50.0%
!! GAGGATTTTGGAGGAGAGTG+GGG - chr8_1:13123408-13123427 Msa1179630:intron 50.0%
!! AGGATTTTGGAGGAGAGTGG+GGG - chr8_1:13123409-13123428 Msa1179630:intron 50.0%
! CATGCCATATCGCTCTAGGT+AGG - chr8_1:13123668-13123687 Msa1179630:three_prime_UTR 50.0%
CTGTTATGTCTGGGTTTCGC+TGG - chr8_1:13124142-13124161 Msa1179630:three_prime_UTR 50.0%
AGGAAGAATTGAGCGGAGGA+GGG + chr8_1:13124326-13124345 None:intergenic 50.0%
CAACACAGTGTGCAGTTTGG+CGG + chr8_1:13124454-13124473 None:intergenic 50.0%
GCACAACACAGTGTGCAGTT+TGG + chr8_1:13124457-13124476 None:intergenic 50.0%
TTGGACCGTCCATACTTCAC+AGG - chr8_1:13124498-13124517 Msa1179630:three_prime_UTR 50.0%
GGCTACCTGTGAAGTATGGA+CGG + chr8_1:13124506-13124525 None:intergenic 50.0%
GCTATGTTTAACGGTGACGC+CGG - chr8_1:13124808-13124827 Msa1179630:intron 50.0%
ACTTCTATGCTTCGGCCTCA+AGG + chr8_1:13124840-13124859 None:intergenic 50.0%
GTCCGTATTAGGCCTTCTTC+TGG + chr8_1:13125849-13125868 None:intergenic 50.0%
TACGGACGGTAAATCGCATG+TGG - chr8_1:13125862-13125881 Msa1179630:intron 50.0%
TGTAGCTCCAGTAATGGCTG+TGG - chr8_1:13126231-13126250 Msa1179630:intron 50.0%
CCCTGCTATTGTGACTGTGA+CGG + chr8_1:13126563-13126582 None:intergenic 50.0%
CCGTCACAGTCACAATAGCA+GGG - chr8_1:13126560-13126579 Msa1179630:intron 50.0%
CGTCACAGTCACAATAGCAG+GGG - chr8_1:13126561-13126580 Msa1179630:intron 50.0%
TAAGGAGGCCGTCACCATAT+TGG - chr8_1:13126588-13126607 Msa1179630:intron 50.0%
ACGAGTAATAGGCCATCCAC+TGG + chr8_1:13126659-13126678 None:intergenic 50.0%
TGTCACCTGCATGAAGCTTC+TGG + chr8_1:13126996-13127015 None:intergenic 50.0%
GCTTCATGCAGGTGACAATG+TGG - chr8_1:13126999-13127018 Msa1179630:intron 50.0%
ATATGGCTAAGGCAAGTCCC+TGG + chr8_1:13127592-13127611 None:intergenic 50.0%
! GGTGACTCGTATGATTCGGG+GGG - chr8_1:13121144-13121163 Msa1179630:three_prime_UTR 55.0%
! TATGATTCGGGGGGTGGTGT+TGG - chr8_1:13121153-13121172 Msa1179630:three_prime_UTR 55.0%
GCAGTCGGGACAACTGTGAA+AGG + chr8_1:13122286-13122305 None:intergenic 55.0%
ACAGTTGTCCCGACTGCTCT+TGG - chr8_1:13122289-13122308 Msa1179630:intron 55.0%
GAGCTTGTAGGAAGCCATGC+TGG + chr8_1:13123345-13123364 None:intergenic 55.0%
!! GGATTTTGGAGGAGAGTGGG+GGG - chr8_1:13123410-13123429 Msa1179630:intron 55.0%
GAGGAAGAATTGAGCGGAGG+AGG + chr8_1:13124327-13124346 None:intergenic 55.0%
GGGGAGGAAGATAGGGTTGA+TGG + chr8_1:13124392-13124411 None:intergenic 55.0%
TTCGGCCTCAAGGTTGTAGC+CGG + chr8_1:13124830-13124849 None:intergenic 55.0%
GCCGTCACAGTCACAATAGC+AGG - chr8_1:13126559-13126578 Msa1179630:intron 55.0%
AGAATGTAAGGGGAGGGGGT+AGG + chr8_1:13127943-13127962 None:intergenic 55.0%
! GACTCGTATGATTCGGGGGG+TGG - chr8_1:13121147-13121166 Msa1179630:three_prime_UTR 60.0%
! TGACGCCGGCTACAACCTTG+AGG - chr8_1:13124822-13124841 Msa1179630:intron 60.0%
GCGGTTGCCACAGCCATTAC+TGG + chr8_1:13126241-13126260 None:intergenic 60.0%
ATGTAAGGGGAGGGGGTAGG+AGG + chr8_1:13127940-13127959 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 13120724 13127994 13120724 ID=Msa1179630;Name=Msa1179630
chr8_1 mRNA 13120724 13127994 13120724 ID=Msa1179630-mRNA-1;Parent=Msa1179630;Name=Msa1179630-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.88|0.9|1|0.77|0.7|10|2293|175
chr8_1 exon 13120724 13121172 13120724 ID=Msa1179630-mRNA-1:exon:4768;Parent=Msa1179630-mRNA-1
chr8_1 exon 13121586 13121728 13121586 ID=Msa1179630-mRNA-1:exon:4767;Parent=Msa1179630-mRNA-1
chr8_1 exon 13121854 13121948 13121854 ID=Msa1179630-mRNA-1:exon:4766;Parent=Msa1179630-mRNA-1
chr8_1 exon 13122109 13122195 13122109 ID=Msa1179630-mRNA-1:exon:4765;Parent=Msa1179630-mRNA-1
chr8_1 exon 13122334 13122518 13122334 ID=Msa1179630-mRNA-1:exon:4764;Parent=Msa1179630-mRNA-1
chr8_1 exon 13123520 13124630 13123520 ID=Msa1179630-mRNA-1:exon:4763;Parent=Msa1179630-mRNA-1
chr8_1 exon 13125462 13125529 13125462 ID=Msa1179630-mRNA-1:exon:4762;Parent=Msa1179630-mRNA-1
chr8_1 exon 13126138 13126187 13126138 ID=Msa1179630-mRNA-1:exon:4761;Parent=Msa1179630-mRNA-1
chr8_1 exon 13126340 13126445 13126340 ID=Msa1179630-mRNA-1:exon:4760;Parent=Msa1179630-mRNA-1
chr8_1 exon 13127468 13127994 13127468 ID=Msa1179630-mRNA-1:exon:4759;Parent=Msa1179630-mRNA-1
chr8_1 CDS 13127468 13127994 13127468 ID=Msa1179630-mRNA-1:cds;Parent=Msa1179630-mRNA-1
chr8_1 CDS 13126445 13126445 13126445 ID=Msa1179630-mRNA-1:cds;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13126340 13126444 13126340 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13126138 13126187 13126138 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13125462 13125529 13125462 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13123520 13124630 13123520 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13122334 13122518 13122334 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13122109 13122195 13122109 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13121854 13121948 13121854 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13121586 13121728 13121586 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
chr8_1 three_prime_UTR 13120724 13121172 13120724 ID=Msa1179630-mRNA-1:three_prime_utr;Parent=Msa1179630-mRNA-1
Gene Sequence

>Msa1179630

ATGGTACACATTGAATTAGATTCAGAGAGTTGTAGCTTTAAAGGGATTGCTATTGATGATTTTGATAGTGGAAGTTCAGGATCCGGTATTCGGAGAGAGCTTTCGTTTTCGCGTTGGTGTGACGACGATGATAATGATGGTGGTGATGGAAGGGTGATTTTGGATCAGAAATTAGGTGATGAGGATGTTATTGTAGAAGAAGACGCTGTTTTTGAGTTGCCTTTTGTTGAAAAGAATGAGGTGCAAGGAAGAGTTTTAGATAGGGAGAGATTTTCTTTTGATAAGTTTCGGAAGGAAAGGATCGTGCCGATGAATGGTGCTAGTACGATGGACGATGATTCTGTTTATAGGAGAGGTAATGGATCTGAGAAGTATGTGCCTTTTGATATTGAAGACAGTGTTGAAAGGGGAACAGTTGGTGGTGACTCGTATGATTCGGGGGGTGGTGTTGGATCACTGCATAAAAGCTCTGAAAATACTGTTCCTGTAGCAAATATCTTGAAGACTATGTTTTTCATATTTGTGTGA
Protein sequence

>Msa1179630

MVHIELDSESCSFKGIAIDDFDSGSSGSGIRRELSFSRWCDDDDNDGGDGRVILDQKLGDEDVIVEEDAVFELPFVEKNEVQGRVLDRERFSFDKFRKERIVPMNGASTMDDDSVYRRGNGSEKYVPFDIEDSVERGTVGGDSYDSGGGVGSLHKSSENTVPVANILKTMFFIFV*