Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153000 | XP_013466683.1 | 97.306 | 297 | 8 | 0 | 1 | 297 | 1 | 297 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153000 | sp|Q9ZUM2|TOM3_ARATH | 82.918 | 281 | 48 | 0 | 17 | 297 | 23 | 303 | 3.60e-176 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153000 | A0A072VRG4 | 97.306 | 297 | 8 | 0 | 1 | 297 | 1 | 297 | 0.0 | 589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa0153000 | 0.816163 | 6.370114e-52 | -8.615850e-47 |
| Msa0058440 | Msa0153000 | 0.819488 | 1.131104e-52 | -8.615850e-47 |
| Msa0106370 | Msa0153000 | 0.866466 | 2.793276e-65 | -8.615850e-47 |
| Msa0153000 | Msa0532790 | 0.805699 | 1.177005e-49 | -8.615850e-47 |
| Msa0153000 | Msa0616560 | 0.833849 | 4.211177e-56 | -8.615850e-47 |
| Msa0153000 | Msa0655990 | 0.822896 | 1.853002e-53 | -8.615850e-47 |
| Msa0153000 | Msa0699920 | 0.802782 | 4.765330e-49 | -8.615850e-47 |
| Msa0153000 | Msa0759470 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
| Msa0153000 | Msa0962190 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0153000 | Msa0996830 | 0.819457 | 1.149961e-52 | -8.615850e-47 |
| Msa0153000 | Msa1131350 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0153000 | Msa1296960 | 0.802414 | 5.674668e-49 | -8.615850e-47 |
| Msa0153000 | Msa1444060 | 0.814337 | 1.621770e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153000 | MtrunA17_Chr1g0162201 | 97.306 | 297 | 8 | 0 | 1 | 297 | 1 | 297 | 0.0 | 589 |
| Msa0153000 | MtrunA17_Chr8g0375261 | 83.972 | 287 | 46 | 0 | 11 | 297 | 8 | 294 | 0.0 | 503 |
| Msa0153000 | MtrunA17_Chr4g0050391 | 58.484 | 277 | 115 | 0 | 21 | 297 | 13 | 289 | 7.23e-121 | 348 |
| Msa0153000 | MtrunA17_Chr2g0288191 | 60.392 | 255 | 101 | 0 | 43 | 297 | 30 | 284 | 2.79e-111 | 323 |
| Msa0153000 | MtrunA17_Chr4g0074691 | 56.884 | 276 | 119 | 0 | 22 | 297 | 3 | 278 | 2.44e-106 | 310 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153000 | AT2G02180.1 | 82.918 | 281 | 48 | 0 | 17 | 297 | 23 | 303 | 3.66e-177 | 491 |
| Msa0153000 | AT1G14530.2 | 80.496 | 282 | 55 | 0 | 16 | 297 | 12 | 293 | 8.44e-164 | 457 |
| Msa0153000 | AT1G14530.1 | 78.855 | 227 | 48 | 0 | 16 | 242 | 12 | 238 | 1.34e-134 | 381 |
| Msa0153000 | AT4G21790.1 | 59.286 | 280 | 114 | 0 | 18 | 297 | 12 | 291 | 1.31e-123 | 355 |
Find 96 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCACTTCTGGTCTTGTTC+TGG | 0.161658 | 1_4:+16082915 | Msa0153000:CDS |
| TCAGTGGCTGATTATTTATT+TGG | 0.167664 | 1_4:+16088557 | Msa0153000:three_prime_UTR |
| CTGTCTAAGGTGTTCTTTGC+AGG | 0.219822 | 1_4:+16085808 | Msa0153000:CDS |
| GGAAATATTACCTTCTTCTT+TGG | 0.262599 | 1_4:+16088438 | Msa0153000:CDS |
| CTTTACAACATATGCACTTC+TGG | 0.271976 | 1_4:+16082904 | Msa0153000:CDS |
| TGGGAACGATCGACGGAGTT+TGG | 0.282109 | 1_4:-16081234 | None:intergenic |
| GATTGAAAATACCGAGAAAA+AGG | 0.299833 | 1_4:+16088529 | Msa0153000:three_prime_UTR |
| TGGGTAGTCCAACCATATTC+TGG | 0.305600 | 1_4:-16081605 | None:intergenic |
| GTTTCTTTGTTTGCTGCCCT+TGG | 0.307184 | 1_4:+16085930 | Msa0153000:CDS |
| TGAGAAAATGAAACACCTTC+TGG | 0.307420 | 1_4:-16081625 | None:intergenic |
| CAATTGAGAGTTCCAGAATA+TGG | 0.308572 | 1_4:+16081593 | Msa0153000:CDS |
| TGTTGTGGTTTATGCTGTTC+AGG | 0.311273 | 1_4:+16083122 | Msa0153000:CDS |
| GGGAACGATCGACGGAGTTT+GGG | 0.318317 | 1_4:-16081233 | None:intergenic |
| TGCACTTCTGGTCTTGTTCT+GGG | 0.328875 | 1_4:+16082916 | Msa0153000:CDS |
| TACACCCTCGCCGGCCTTTA+CGG | 0.339761 | 1_4:+16081391 | Msa0153000:CDS |
| TTTCCTTATCAGAAGTGTTA+TGG | 0.345609 | 1_4:+16087968 | Msa0153000:CDS |
| CGTACTAGTCATTCTGTCTA+AGG | 0.350388 | 1_4:+16085795 | Msa0153000:CDS |
| CAGCTTCTTACGACGCCCTT+TGG | 0.359651 | 1_4:-16086523 | None:intergenic |
| CGACGCCCTTTGGATTCAAC+AGG | 0.380572 | 1_4:-16086513 | None:intergenic |
| TAGGATGGTCCATCACATTA+AGG | 0.382104 | 1_4:-16088105 | None:intergenic |
| AGAATTTGTAGTTGCTTGCT+AGG | 0.397965 | 1_4:-16081154 | None:intergenic |
| CTGGGCTGAGATTTATTACC+AGG | 0.402191 | 1_4:+16082934 | Msa0153000:CDS |
| CGTCGTTTCCGCCATAGCTT+TGG | 0.423002 | 1_4:+16081414 | Msa0153000:CDS |
| GAATTTGTAGTTGCTTGCTA+GGG | 0.430164 | 1_4:-16081153 | None:intergenic |
| TTTCTTTGTTTGCTGCCCTT+GGG | 0.430319 | 1_4:+16085931 | Msa0153000:CDS |
| GCCCTTGGGTTTCTTCTCTA+CGG | 0.437396 | 1_4:+16085945 | Msa0153000:CDS |
| GAGAAAATGAAACACCTTCT+GGG | 0.439545 | 1_4:-16081624 | None:intergenic |
| GAACGACATCGACGATTCTC+CGG | 0.444368 | 1_4:+16081348 | Msa0153000:CDS |
| AAGATGCGGTCTTGCCAAAC+CGG | 0.453837 | 1_4:-16081367 | None:intergenic |
| ACCTCGCCGTCGTCGGTGAC+AGG | 0.458409 | 1_4:+16081271 | Msa0153000:CDS |
| TGCTAGGGGCTAAGATTGGT+GGG | 0.458604 | 1_4:-16081138 | None:intergenic |
| TTGCTAGGGGCTAAGATTGG+TGG | 0.458865 | 1_4:-16081139 | None:intergenic |
| CGAGGTGTTGTTGGTCATTG+TGG | 0.466760 | 1_4:-16081254 | None:intergenic |
| GTTCCACCAGGTTGAGGAAT+CGG | 0.468815 | 1_4:-16081329 | None:intergenic |
| CGCTTTCCTGTTGAATCCAA+AGG | 0.469858 | 1_4:+16086507 | Msa0153000:CDS |
| TGCTTGCTAGGGGCTAAGAT+TGG | 0.471082 | 1_4:-16081142 | None:intergenic |
| ACATTAATTGTATAGAAACT+TGG | 0.472412 | 1_4:-16083102 | None:intergenic |
| TCACCATAACACTTCTGATA+AGG | 0.473201 | 1_4:-16087971 | None:intergenic |
| CGACGACGGCGAGGTGTTGT+TGG | 0.475128 | 1_4:-16081263 | None:intergenic |
| ACATCGACGATTCTCCGGTT+TGG | 0.476060 | 1_4:+16081353 | Msa0153000:CDS |
| GCACATCAAGTAAGATATGT+TGG | 0.497834 | 1_4:-16082868 | None:intergenic |
| TGTATGTGCACGTGTATGAA+TGG | 0.500483 | 1_4:-16081104 | None:intergenic |
| GAGTGACAAAGCTTGTATCA+TGG | 0.503399 | 1_4:+16088642 | Msa0153000:three_prime_UTR |
| GGTTTCTTCTCTACGGTGGA+AGG | 0.504569 | 1_4:+16085952 | Msa0153000:CDS |
| TAATATATGAAGTTTAGAAT+AGG | 0.508408 | 1_4:-16088124 | None:intergenic |
| GCTGATTCTCATAGTCCAAA+GGG | 0.510191 | 1_4:+16088579 | Msa0153000:three_prime_UTR |
| TTTCTATACAATTAATGTTG+TGG | 0.510519 | 1_4:+16083107 | Msa0153000:CDS |
| TGGCGGAAACGACGCCGTAA+AGG | 0.516515 | 1_4:-16081405 | None:intergenic |
| TGAGAGTTCCAGAATATGGT+TGG | 0.518623 | 1_4:+16081597 | Msa0153000:CDS |
| AGTGACAAAGCTTGTATCAT+GGG | 0.518687 | 1_4:+16088643 | Msa0153000:three_prime_UTR |
| GAGGTGTTGTTGGTCATTGT+GGG | 0.519647 | 1_4:-16081253 | None:intergenic |
| ATCGTCGATGTCGTTCCACC+AGG | 0.520262 | 1_4:-16081341 | None:intergenic |
| ATGAATAAGACCAAAGAAGA+AGG | 0.523019 | 1_4:-16088448 | None:intergenic |
| GGAAACGACGCCGTAAAGGC+CGG | 0.530370 | 1_4:-16081401 | None:intergenic |
| GGCTGATTCTCATAGTCCAA+AGG | 0.532642 | 1_4:+16088578 | Msa0153000:three_prime_UTR |
| GCTTTCCTGTTGAATCCAAA+GGG | 0.544156 | 1_4:+16086508 | Msa0153000:CDS |
| GGAGTTTGGGGCACACGCGC+CGG | 0.551917 | 1_4:-16081220 | None:intergenic |
| GCACGTGCTGTATCCACTGA+TGG | 0.558795 | 1_4:+16083072 | Msa0153000:CDS |
| TATTGTGTGATACCACGCTT+TGG | 0.559304 | 1_4:-16088487 | None:intergenic |
| AAACGCGAACCTTAATGTGA+TGG | 0.562294 | 1_4:+16088096 | Msa0153000:CDS |
| GTCATTGTGGGAACGATCGA+CGG | 0.562849 | 1_4:-16081241 | None:intergenic |
| GATGTCGTTCCACCAGGTTG+AGG | 0.564379 | 1_4:-16081335 | None:intergenic |
| ATGAGAAGGTACCAAAGCTA+TGG | 0.571420 | 1_4:-16081425 | None:intergenic |
| CGACGCCGTAAAGGCCGGCG+AGG | 0.579591 | 1_4:-16081396 | None:intergenic |
| GTTTGGGGCACACGCGCCGG+TGG | 0.585408 | 1_4:-16081217 | None:intergenic |
| GACAGGCGCGGTGGTGAACG+CGG | 0.588632 | 1_4:+16081288 | Msa0153000:CDS |
| TCTAAACTTCATATATTACC+TGG | 0.590927 | 1_4:+16088129 | Msa0153000:CDS |
| TGTGTGATACCACGCTTTGG+TGG | 0.591434 | 1_4:-16088484 | None:intergenic |
| AACTCACCGATTCCTCAACC+TGG | 0.591877 | 1_4:+16081323 | Msa0153000:CDS |
| CTTGGGTTTCTTCTCTACGG+TGG | 0.595848 | 1_4:+16085948 | Msa0153000:CDS |
| GTATGTGCACGTGTATGAAT+GGG | 0.597959 | 1_4:-16081103 | None:intergenic |
| CAACAACACCTCGCCGTCGT+CGG | 0.609317 | 1_4:+16081264 | Msa0153000:CDS |
| GCCGTCGTCGGTGACAGGCG+CGG | 0.609384 | 1_4:+16081276 | Msa0153000:CDS |
| GACGCCGTAAAGGCCGGCGA+GGG | 0.609478 | 1_4:-16081395 | None:intergenic |
| ACTTGGCTTCAGTCCATCAG+TGG | 0.611275 | 1_4:-16083085 | None:intergenic |
| AATTTGTAGTTGCTTGCTAG+GGG | 0.616727 | 1_4:-16081152 | None:intergenic |
| GTTGTAAAGAAAGCAAGACT+TGG | 0.617097 | 1_4:-16082890 | None:intergenic |
| AGAATGACTAGTACGCTGAC+TGG | 0.622590 | 1_4:-16085787 | None:intergenic |
| AGAAGGTACCAAAGCTATGG+CGG | 0.625010 | 1_4:-16081422 | None:intergenic |
| CACCGTAGAGAAGAAACCCA+AGG | 0.626340 | 1_4:-16085947 | None:intergenic |
| ACCGCGCCTGTCACCGACGA+CGG | 0.629626 | 1_4:-16081277 | None:intergenic |
| CGCATCTTCTACACCCTCGC+CGG | 0.632929 | 1_4:+16081382 | Msa0153000:CDS |
| AGGAAGCTTCCACCAAAGCG+TGG | 0.641984 | 1_4:+16088475 | Msa0153000:CDS |
| GGAACGATCGACGGAGTTTG+GGG | 0.648473 | 1_4:-16081232 | None:intergenic |
| ATATGAAGTTTAGAATAGGA+TGG | 0.649295 | 1_4:-16088120 | None:intergenic |
| GCCTGTCACCGACGACGGCG+AGG | 0.655892 | 1_4:-16081272 | None:intergenic |
| CGGCGAGGGTGTAGAAGATG+CGG | 0.656168 | 1_4:-16081381 | None:intergenic |
| ATATGGTTGGACTACCCAGA+AGG | 0.660843 | 1_4:+16081610 | Msa0153000:CDS |
| TCTTCTTTCGGAATGTACAG+AGG | 0.665668 | 1_4:+16081805 | Msa0153000:CDS |
| ACCGTAGAGAAGAAACCCAA+GGG | 0.668324 | 1_4:-16085946 | None:intergenic |
| GCGTCGTAAGAAGCTGCAAG+AGG | 0.671751 | 1_4:+16086530 | Msa0153000:CDS |
| GTCGTCGGTGACAGGCGCGG+TGG | 0.677193 | 1_4:+16081279 | Msa0153000:CDS |
| AGGCGCGGTGGTGAACGCGG+TGG | 0.685538 | 1_4:+16081291 | Msa0153000:CDS |
| TGTACAGAGGTTACAGCCAG+AGG | 0.691850 | 1_4:+16081818 | Msa0153000:CDS |
| TCACCGATTCCTCAACCTGG+TGG | 0.693137 | 1_4:+16081326 | Msa0153000:CDS |
| GCACGTGTATGAATGGGACA+AGG | 0.749322 | 1_4:-16081097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTGTTTTTATAAAAA+GGG | - | chr1_4:16084108-16084127 | None:intergenic | 10.0% |
| !! | TAAAAACAAAAAAAAAAGAT+TGG | - | chr1_4:16085719-16085738 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTTTTTTTTTGT+TGG | + | chr1_4:16085983-16086002 | Msa0153000:intron | 10.0% |
| !! | ATCAAAAATTGAAAAATTTA+AGG | + | chr1_4:16086343-16086362 | Msa0153000:intron | 10.0% |
| !! | TAATGATGTTAATATATATT+GGG | - | chr1_4:16086914-16086933 | None:intergenic | 10.0% |
| !! | TTAATGATGTTAATATATAT+TGG | - | chr1_4:16086915-16086934 | None:intergenic | 10.0% |
| !! | ATTAGAGATATATTAATATT+TGG | - | chr1_4:16087291-16087310 | None:intergenic | 10.0% |
| !!! | ATTTTGATTTAAAAATAGAT+GGG | - | chr1_4:16087999-16088018 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTAAAAATAGA+TGG | - | chr1_4:16088000-16088019 | None:intergenic | 10.0% |
| !!! | TACTGTTTAATTTTATTTTT+TGG | + | chr1_4:16088202-16088221 | Msa0153000:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAC+CGG | + | chr1_4:16081201-16081220 | Msa0153000:five_prime_UTR | 15.0% |
| !!! | ATTATTTTTCTTTCCAATTT+AGG | + | chr1_4:16081498-16081517 | Msa0153000:intron | 15.0% |
| !!! | TTATTTTTCTTTCCAATTTA+GGG | + | chr1_4:16081499-16081518 | Msa0153000:intron | 15.0% |
| !! | TGATATATGATGAAATATTA+TGG | + | chr1_4:16082538-16082557 | Msa0153000:intron | 15.0% |
| !!! | TGTTGTATATGATTTTTATT+AGG | + | chr1_4:16082613-16082632 | Msa0153000:intron | 15.0% |
| !! | AAAAAATAATGACTGTAATA+TGG | - | chr1_4:16083721-16083740 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTTTATAAAAAGG+GGG | - | chr1_4:16084106-16084125 | None:intergenic | 15.0% |
| !!! | GATTTTGTTTTTATAAAAAG+GGG | - | chr1_4:16084107-16084126 | None:intergenic | 15.0% |
| !!! | CTGATTTTGTTTTTATAAAA+AGG | - | chr1_4:16084109-16084128 | None:intergenic | 15.0% |
| !!! | AGTAGTTCTATTATATTAAT+GGG | - | chr1_4:16086603-16086622 | None:intergenic | 15.0% |
| !!! | TAGTAGTTCTATTATATTAA+TGG | - | chr1_4:16086604-16086623 | None:intergenic | 15.0% |
| !! | AATTAAAATTATGAGTTGTT+AGG | - | chr1_4:16086669-16086688 | None:intergenic | 15.0% |
| !! | TAAGAGTAATTAAGATTAAT+AGG | - | chr1_4:16086766-16086785 | None:intergenic | 15.0% |
| !! | TCTCTAATAAAGTAATTATT+TGG | + | chr1_4:16087303-16087322 | Msa0153000:intron | 15.0% |
| !! | CTCTAATAAAGTAATTATTT+GGG | + | chr1_4:16087304-16087323 | Msa0153000:intron | 15.0% |
| !!! | TTTTGATTTAAAAATAGATG+GGG | - | chr1_4:16087998-16088017 | None:intergenic | 15.0% |
| !!! | TAATATATGAAGTTTAGAAT+AGG | - | chr1_4:16088127-16088146 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTTGGTAAGAT+TGG | + | chr1_4:16088211-16088230 | Msa0153000:intron | 15.0% |
| !! | AAGTAAATAAAACCCTAAAT+TGG | - | chr1_4:16081514-16081533 | None:intergenic | 20.0% |
| !!! | TTAGTGATATGTAAACTTTT+TGG | + | chr1_4:16081756-16081775 | Msa0153000:intron | 20.0% |
| !! | TGATGATTACAATTGATTAA+CGG | - | chr1_4:16082675-16082694 | None:intergenic | 20.0% |
| !!! | TATTCTTATTTGTAAAGAAC+AGG | + | chr1_4:16082783-16082802 | Msa0153000:intron | 20.0% |
| !!! | ATTCTTATTTGTAAAGAACA+GGG | + | chr1_4:16082784-16082803 | Msa0153000:intron | 20.0% |
| !! | ACATTAATTGTATAGAAACT+TGG | - | chr1_4:16083105-16083124 | None:intergenic | 20.0% |
| !! | TTTCTATACAATTAATGTTG+TGG | + | chr1_4:16083107-16083126 | Msa0153000:CDS | 20.0% |
| !! | GATTATATTACAATAGCTTA+AGG | - | chr1_4:16083347-16083366 | None:intergenic | 20.0% |
| !! | TATTTCAACATAGTAATGAT+CGG | + | chr1_4:16084013-16084032 | Msa0153000:intron | 20.0% |
| !!! | TTTTGTTTTTATAAAAAGGG+GGG | - | chr1_4:16084105-16084124 | None:intergenic | 20.0% |
| !!! | GAACATTTAACTTTTATGTA+GGG | - | chr1_4:16084577-16084596 | None:intergenic | 20.0% |
| !!! | AATATACTGTTTTCAAACTA+TGG | + | chr1_4:16084756-16084775 | Msa0153000:intron | 20.0% |
| !! | TGATAAATTGAAAGAAGTAA+AGG | - | chr1_4:16085859-16085878 | None:intergenic | 20.0% |
| !! | TCTATTATATTAATGGGATT+GGG | - | chr1_4:16086597-16086616 | None:intergenic | 20.0% |
| !! | TTCTATTATATTAATGGGAT+TGG | - | chr1_4:16086598-16086617 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTTTGAATTCTTA+AGG | + | chr1_4:16086880-16086899 | Msa0153000:intron | 20.0% |
| !! | TACCTTAAGAATTCAAAAAA+AGG | - | chr1_4:16086885-16086904 | None:intergenic | 20.0% |
| !! | AATGTAACTAGAAAAAAAAG+AGG | + | chr1_4:16087004-16087023 | Msa0153000:intron | 20.0% |
| !!! | AAATCAAAATTGATTCCTAT+TGG | + | chr1_4:16088009-16088028 | Msa0153000:intron | 20.0% |
| !!! | AATTAAACAGTAAGAAGTAT+TGG | - | chr1_4:16088194-16088213 | None:intergenic | 20.0% |
| !! | GTTTCATTTTCTCAATTTTG+TGG | + | chr1_4:16081634-16081653 | Msa0153000:CDS | 25.0% |
| !!! | GTTTAGTTTTCATCTTCTTT+CGG | + | chr1_4:16081793-16081812 | Msa0153000:CDS | 25.0% |
| ! | TGAAATGCTAAAATCAATGA+TGG | - | chr1_4:16081850-16081869 | None:intergenic | 25.0% |
| ! | AAAATTTCCTTAAGCTTATG+CGG | - | chr1_4:16081975-16081994 | None:intergenic | 25.0% |
| ! | AGACATGATATAATTAGACA+TGG | + | chr1_4:16082303-16082322 | Msa0153000:intron | 25.0% |
| ! | GACATGATATAATTAGACAT+GGG | + | chr1_4:16082304-16082323 | Msa0153000:intron | 25.0% |
| ! | ACATGATATAATTAGACATG+GGG | + | chr1_4:16082305-16082324 | Msa0153000:intron | 25.0% |
| !! | TCTACCATATTTTCTACAAA+AGG | - | chr1_4:16082357-16082376 | None:intergenic | 25.0% |
| !! | AAGGAGAGTATATCAAATTA+AGG | + | chr1_4:16082422-16082441 | Msa0153000:intron | 25.0% |
| !! | AGGAGAGTATATCAAATTAA+GGG | + | chr1_4:16082423-16082442 | Msa0153000:intron | 25.0% |
| !!! | TTTTGTAGTTTGGTTTTGAT+GGG | + | chr1_4:16083015-16083034 | Msa0153000:intron | 25.0% |
| !!! | GTTTTACCTTTTTAAGATCA+TGG | + | chr1_4:16083173-16083192 | Msa0153000:intron | 25.0% |
| !! | TATTTCTACAATCAAACTTC+TGG | + | chr1_4:16083256-16083275 | Msa0153000:intron | 25.0% |
| ! | TTCTGGACAATATAATTTGA+TGG | + | chr1_4:16083273-16083292 | Msa0153000:intron | 25.0% |
| !! | CAAATGTCAAGTGAAAATTT+TGG | + | chr1_4:16083366-16083385 | Msa0153000:intron | 25.0% |
| !! | TTTGGAGCGTTTATAAAATT+TGG | + | chr1_4:16083384-16083403 | Msa0153000:intron | 25.0% |
| ! | TTTCCATGAATCAATGATTA+CGG | + | chr1_4:16083477-16083496 | Msa0153000:intron | 25.0% |
| ! | ACGGATAATATTATTTCACA+TGG | + | chr1_4:16083496-16083515 | Msa0153000:intron | 25.0% |
| ! | ACAATTCAGTAAAATGAGAA+TGG | - | chr1_4:16083524-16083543 | None:intergenic | 25.0% |
| !! | ATTCTCATTTTACTGAATTG+TGG | + | chr1_4:16083523-16083542 | Msa0153000:intron | 25.0% |
| !! | TTCTCATTTTACTGAATTGT+GGG | + | chr1_4:16083524-16083543 | Msa0153000:intron | 25.0% |
| !!! | TAGAAAATCACTTTTTCCTT+GGG | - | chr1_4:16083746-16083765 | None:intergenic | 25.0% |
| !!! | TTAGAAAATCACTTTTTCCT+TGG | - | chr1_4:16083747-16083766 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGACAACTGCTA+TGG | + | chr1_4:16083824-16083843 | Msa0153000:intron | 25.0% |
| ! | TTTCGATAGAAAAGATGTTA+TGG | - | chr1_4:16083926-16083945 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTATAAAAAGGGG+GGG | - | chr1_4:16084104-16084123 | None:intergenic | 25.0% |
| ! | AGTGCTAGAATTTAATCAAA+AGG | - | chr1_4:16084163-16084182 | None:intergenic | 25.0% |
| ! | ATATTGCCACTAGTTAAATT+TGG | + | chr1_4:16084203-16084222 | Msa0153000:intron | 25.0% |
| !!! | GGAACATTTAACTTTTATGT+AGG | - | chr1_4:16084578-16084597 | None:intergenic | 25.0% |
| !! | ATTTTTGTAATAGATGCTAG+AGG | - | chr1_4:16084606-16084625 | None:intergenic | 25.0% |
| ! | ACTTAGATAAAAGTTCTACA+CGG | + | chr1_4:16084698-16084717 | Msa0153000:intron | 25.0% |
| ! | AAAGTTACTTAGAAACATCT+GGG | + | chr1_4:16084927-16084946 | Msa0153000:intron | 25.0% |
| !!! | ATATTTGTTTTCAAGAAACC+AGG | + | chr1_4:16085135-16085154 | Msa0153000:intron | 25.0% |
| !! | ATCCTGATTTTCTAATTAAC+TGG | - | chr1_4:16085408-16085427 | None:intergenic | 25.0% |
| !! | GATGGACTTATTGAATATTA+CGG | - | chr1_4:16085552-16085571 | None:intergenic | 25.0% |
| ! | TAGTTATGATAGACAAAAGA+TGG | - | chr1_4:16085570-16085589 | None:intergenic | 25.0% |
| ! | AATATTGAAATCAGAACCAA+TGG | - | chr1_4:16085636-16085655 | None:intergenic | 25.0% |
| !!! | TCATTTTGTGGTTGATATTA+TGG | + | chr1_4:16085758-16085777 | Msa0153000:CDS | 25.0% |
| !! | TCAATTTATCAAGACTTTTG+CGG | + | chr1_4:16085868-16085887 | Msa0153000:intron | 25.0% |
| ! | TTCATTCCAAATTACATCAA+GGG | - | chr1_4:16086020-16086039 | None:intergenic | 25.0% |
| ! | TTTCATTCCAAATTACATCA+AGG | - | chr1_4:16086021-16086040 | None:intergenic | 25.0% |
| !! | TTTTTCTCATGGTTTCTTAA+AGG | + | chr1_4:16086186-16086205 | Msa0153000:intron | 25.0% |
| !! | TTTTCTCATGGTTTCTTAAA+GGG | + | chr1_4:16086187-16086206 | Msa0153000:intron | 25.0% |
| ! | GAGAAGATAATAGAAAAAGA+AGG | - | chr1_4:16086306-16086325 | None:intergenic | 25.0% |
| ! | AATATAAACATGTCAGATGA+GGG | - | chr1_4:16086702-16086721 | None:intergenic | 25.0% |
| !!! | CCTATTTCGTTTTGAAATTA+AGG | - | chr1_4:16086942-16086961 | None:intergenic | 25.0% |
| ! | CCTTAATTTCAAAACGAAAT+AGG | + | chr1_4:16086939-16086958 | Msa0153000:intron | 25.0% |
| ! | TGATAATTAAGAGCTATTAG+TGG | + | chr1_4:16087345-16087364 | Msa0153000:intron | 25.0% |
| ! | GATAATTAAGAGCTATTAGT+GGG | + | chr1_4:16087346-16087365 | Msa0153000:intron | 25.0% |
| ! | ATAATTAAGAGCTATTAGTG+GGG | + | chr1_4:16087347-16087366 | Msa0153000:intron | 25.0% |
| ! | AATTCCTATAACCTAAACAT+GGG | - | chr1_4:16087775-16087794 | None:intergenic | 25.0% |
| ! | TAATTCCTATAACCTAAACA+TGG | - | chr1_4:16087776-16087795 | None:intergenic | 25.0% |
| ! | TAGGAATTATCTAGAGATAA+AGG | + | chr1_4:16087787-16087806 | Msa0153000:intron | 25.0% |
| !! | AGAGAATGGTTTTCAAATAA+TGG | + | chr1_4:16087837-16087856 | Msa0153000:intron | 25.0% |
| !! | AATAAGTGATGTTTCTTTTC+AGG | + | chr1_4:16087914-16087933 | Msa0153000:intron | 25.0% |
| ! | CAATTTAAAAACCAACCAAT+AGG | - | chr1_4:16088027-16088046 | None:intergenic | 25.0% |
| !! | ATATGAAGTTTAGAATAGGA+TGG | - | chr1_4:16088123-16088142 | None:intergenic | 25.0% |
| ! | TCTAAACTTCATATATTACC+TGG | + | chr1_4:16088129-16088148 | Msa0153000:CDS | 25.0% |
| !!! | TTTTTTTGTGTTCTCAATTG+TGG | + | chr1_4:16088157-16088176 | Msa0153000:intron | 25.0% |
| !! | ACACAGATTTATGGATTAAA+CGG | - | chr1_4:16088346-16088365 | None:intergenic | 25.0% |
| ! | CTGTTATAAAAATTACCCTT+TGG | - | chr1_4:16088597-16088616 | None:intergenic | 25.0% |
| !! | GAGAAAGTTAATCTTTTCTA+TGG | + | chr1_4:16088616-16088635 | Msa0153000:three_prime_UTR | 25.0% |
| !! | AAGTTAATCTTTTCTATGGT+TGG | + | chr1_4:16088620-16088639 | Msa0153000:three_prime_UTR | 25.0% |
| !!! | ATGGGTTTTATAGTTCATTA+AGG | + | chr1_4:16088661-16088680 | Msa0153000:three_prime_UTR | 25.0% |
| TAAGATTGAATAGGATGAGA+AGG | - | chr1_4:16081442-16081461 | None:intergenic | 30.0% | |
| TTCTCATCCTATTCAATCTT+AGG | + | chr1_4:16081441-16081460 | Msa0153000:intron | 30.0% | |
| TCTCATCCTATTCAATCTTA+GGG | + | chr1_4:16081442-16081461 | Msa0153000:intron | 30.0% | |
| AATTGAGTTACGAATGCATA+GGG | - | chr1_4:16081473-16081492 | None:intergenic | 30.0% | |
| TAATTGAGTTACGAATGCAT+AGG | - | chr1_4:16081474-16081493 | None:intergenic | 30.0% | |
| TATATCACATAAAACCCCAT+CGG | - | chr1_4:16081946-16081965 | None:intergenic | 30.0% | |
| TTTATCGTAGAACCTTAAGA+TGG | + | chr1_4:16081993-16082012 | Msa0153000:intron | 30.0% | |
| TTATCGTAGAACCTTAAGAT+GGG | + | chr1_4:16081994-16082013 | Msa0153000:intron | 30.0% | |
| AGCATATCACAAAACATTAG+CGG | - | chr1_4:16082165-16082184 | None:intergenic | 30.0% | |
| TAGTACAATGTGTTGTCAAA+TGG | + | chr1_4:16082188-16082207 | Msa0153000:intron | 30.0% | |
| ! | ACCACCTTTTGTAGAAAATA+TGG | + | chr1_4:16082350-16082369 | Msa0153000:intron | 30.0% |
| ! | ACCATATTTTCTACAAAAGG+TGG | - | chr1_4:16082354-16082373 | None:intergenic | 30.0% |
| AATATGGTAGAAACATAGCT+TGG | + | chr1_4:16082366-16082385 | Msa0153000:intron | 30.0% | |
| ATATGGTAGAAACATAGCTT+GGG | + | chr1_4:16082367-16082386 | Msa0153000:intron | 30.0% | |
| AGATCTCAAGATTAATGAGT+TGG | + | chr1_4:16082506-16082525 | Msa0153000:intron | 30.0% | |
| GTAAAGAACAGGGTTTAATA+TGG | + | chr1_4:16082794-16082813 | Msa0153000:intron | 30.0% | |
| GATTTATTACCAGGTAAGTT+TGG | + | chr1_4:16082943-16082962 | Msa0153000:intron | 30.0% | |
| ! | TCTGTTTTCTTCTTTTGTCT+TGG | + | chr1_4:16082988-16083007 | Msa0153000:intron | 30.0% |
| !!! | GTTTTGTAGTTTGGTTTTGA+TGG | + | chr1_4:16083014-16083033 | Msa0153000:intron | 30.0% |
| CAACATCCATGATCTTAAAA+AGG | - | chr1_4:16083182-16083201 | None:intergenic | 30.0% | |
| AGCATGTCTAGTAATATGTT+CGG | + | chr1_4:16083301-16083320 | Msa0153000:intron | 30.0% | |
| TGGATTGATATGGAATAGTT+TGG | + | chr1_4:16083431-16083450 | Msa0153000:intron | 30.0% | |
| !! | TATCCGTAATCATTGATTCA+TGG | - | chr1_4:16083483-16083502 | None:intergenic | 30.0% |
| ! | TCTCATTTTACTGAATTGTG+GGG | + | chr1_4:16083525-16083544 | Msa0153000:intron | 30.0% |
| CAATAATTAAAACCTTGCTG+AGG | + | chr1_4:16083562-16083581 | Msa0153000:intron | 30.0% | |
| GTAATGTTAGAATCCTCAAA+TGG | - | chr1_4:16083649-16083668 | None:intergenic | 30.0% | |
| TATGGACATGAAGAGTTTAA+AGG | - | chr1_4:16083703-16083722 | None:intergenic | 30.0% | |
| !!! | AGTCATTATTTTTTGTCCCA+AGG | + | chr1_4:16083727-16083746 | Msa0153000:intron | 30.0% |
| TCTAAACAAAGATCTTACAC+TGG | + | chr1_4:16083762-16083781 | Msa0153000:intron | 30.0% | |
| TAGAAAAGATGTTATGGTTG+TGG | - | chr1_4:16083920-16083939 | None:intergenic | 30.0% | |
| ATCTAGCCAAATTTAACTAG+TGG | - | chr1_4:16084212-16084231 | None:intergenic | 30.0% | |
| AAGATAAAGTGACAACATAC+AGG | - | chr1_4:16084375-16084394 | None:intergenic | 30.0% | |
| !! | GTATGTTGTCACTTTATCTT+TGG | + | chr1_4:16084375-16084394 | Msa0153000:intron | 30.0% |
| ! | AAGTTTCACGTGTTTAGTTT+GGG | - | chr1_4:16084671-16084690 | None:intergenic | 30.0% |
| TAAGTTTCACGTGTTTAGTT+TGG | - | chr1_4:16084672-16084691 | None:intergenic | 30.0% | |
| CTTAGATAAAAGTTCTACAC+GGG | + | chr1_4:16084699-16084718 | Msa0153000:intron | 30.0% | |
| GAAAGTTACTTAGAAACATC+TGG | + | chr1_4:16084926-16084945 | Msa0153000:intron | 30.0% | |
| AGAAGTTTAATCCTAAGAGA+GGG | + | chr1_4:16085001-16085020 | Msa0153000:intron | 30.0% | |
| ! | TCACTAAGCCTATTAATTTG+TGG | - | chr1_4:16085048-16085067 | None:intergenic | 30.0% |
| TTAGTTATAAGCACGTGAAA+GGG | - | chr1_4:16085091-16085110 | None:intergenic | 30.0% | |
| TTTAGTTATAAGCACGTGAA+AGG | - | chr1_4:16085092-16085111 | None:intergenic | 30.0% | |
| TGCCAGTTAATTAGAAAATC+AGG | + | chr1_4:16085403-16085422 | Msa0153000:intron | 30.0% | |
| TTAAAGATATCAAATCTGCG+CGG | + | chr1_4:16085471-16085490 | Msa0153000:intron | 30.0% | |
| TTTATACAGACATCATGTGT+TGG | - | chr1_4:16085597-16085616 | None:intergenic | 30.0% | |
| ! | ATGTATGTCAGATCATTTTG+TGG | + | chr1_4:16085746-16085765 | Msa0153000:intron | 30.0% |
| !! | TTTTGTGGTTGATATTATGG+TGG | + | chr1_4:16085761-16085780 | Msa0153000:CDS | 30.0% |
| ! | CAATTTATCAAGACTTTTGC+GGG | + | chr1_4:16085869-16085888 | Msa0153000:intron | 30.0% |
| TCATTCCAAATTACATCAAG+GGG | - | chr1_4:16086019-16086038 | None:intergenic | 30.0% | |
| GAATGAAACTTATTGCATCT+AGG | + | chr1_4:16086033-16086052 | Msa0153000:intron | 30.0% | |
| CAAGATACCAATCACATATT+AGG | + | chr1_4:16086059-16086078 | Msa0153000:intron | 30.0% | |
| ATCAGTGATACTACAAAAGT+GGG | - | chr1_4:16086446-16086465 | None:intergenic | 30.0% | |
| AATCAGTGATACTACAAAAG+TGG | - | chr1_4:16086447-16086466 | None:intergenic | 30.0% | |
| GAATATAAACATGTCAGATG+AGG | - | chr1_4:16086703-16086722 | None:intergenic | 30.0% | |
| ! | TGCATTGTATTTGGATTTTG+AGG | - | chr1_4:16086820-16086839 | None:intergenic | 30.0% |
| ! | GTGGATTTTTGCATTGTATT+TGG | - | chr1_4:16086829-16086848 | None:intergenic | 30.0% |
| TATTTGTATACTACAAGCTG+TGG | - | chr1_4:16086848-16086867 | None:intergenic | 30.0% | |
| ATATCAGGTGTCTATTATTC+TGG | - | chr1_4:16087056-16087075 | None:intergenic | 30.0% | |
| ATAATAGACACCTGATATTG+TGG | + | chr1_4:16087058-16087077 | Msa0153000:intron | 30.0% | |
| TTATTTGGGTAAGAGTTCTT+TGG | + | chr1_4:16087318-16087337 | Msa0153000:intron | 30.0% | |
| ATTTCACCAGTTTCCTTATA+GGG | - | chr1_4:16087411-16087430 | None:intergenic | 30.0% | |
| !!! | TCGTGTTTTTGGTATATTAG+CGG | + | chr1_4:16087588-16087607 | Msa0153000:intron | 30.0% |
| CGTTAAGATCTTTGTAATTG+AGG | + | chr1_4:16087614-16087633 | Msa0153000:intron | 30.0% | |
| GAAATTTACATTACTGTCAC+TGG | - | chr1_4:16087660-16087679 | None:intergenic | 30.0% | |
| GAATTATCTAGAGATAAAGG+AGG | + | chr1_4:16087790-16087809 | Msa0153000:intron | 30.0% | |
| !! | TTTCCTTATCAGAAGTGTTA+TGG | + | chr1_4:16087968-16087987 | Msa0153000:CDS | 30.0% |
| ! | CAAAATTGATTCCTATTGGT+TGG | + | chr1_4:16088013-16088032 | Msa0153000:intron | 30.0% |
| ACTTCATATATTACCTGGTA+AGG | + | chr1_4:16088134-16088153 | Msa0153000:intron | 30.0% | |
| TATCCTAACTAGATCCAAAA+GGG | - | chr1_4:16088241-16088260 | None:intergenic | 30.0% | |
| ATATCCTAACTAGATCCAAA+AGG | - | chr1_4:16088242-16088261 | None:intergenic | 30.0% | |
| TTTGGATCTAGTTAGGATAT+TGG | + | chr1_4:16088242-16088261 | Msa0153000:intron | 30.0% | |
| TTGGATCTAGTTAGGATATT+GGG | + | chr1_4:16088243-16088262 | Msa0153000:intron | 30.0% | |
| GGAAATATTACCTTCTTCTT+TGG | + | chr1_4:16088438-16088457 | Msa0153000:CDS | 30.0% | |
| ATGAATAAGACCAAAGAAGA+AGG | - | chr1_4:16088451-16088470 | None:intergenic | 30.0% | |
| !!! | CTTTGGTCTTATTCATTTTG+AGG | + | chr1_4:16088455-16088474 | Msa0153000:CDS | 30.0% |
| ! | TTTCAATCTTTTCAGCGAAT+CGG | - | chr1_4:16088517-16088536 | None:intergenic | 30.0% |
| GATTGAAAATACCGAGAAAA+AGG | + | chr1_4:16088529-16088548 | Msa0153000:three_prime_UTR | 30.0% | |
| TCAGTGGCTGATTATTTATT+TGG | + | chr1_4:16088557-16088576 | Msa0153000:three_prime_UTR | 30.0% | |
| ! | AATTTGTAGTTGCTTGCTAG+GGG | - | chr1_4:16081155-16081174 | None:intergenic | 35.0% |
| ! | GAATTTGTAGTTGCTTGCTA+GGG | - | chr1_4:16081156-16081175 | None:intergenic | 35.0% |
| AGAATTTGTAGTTGCTTGCT+AGG | - | chr1_4:16081157-16081176 | None:intergenic | 35.0% | |
| GAAGAACCCTAAGATTGAAT+AGG | - | chr1_4:16081451-16081470 | None:intergenic | 35.0% | |
| CAATTGAGAGTTCCAGAATA+TGG | + | chr1_4:16081593-16081612 | Msa0153000:CDS | 35.0% | |
| GAGAAAATGAAACACCTTCT+GGG | - | chr1_4:16081627-16081646 | None:intergenic | 35.0% | |
| TGAGAAAATGAAACACCTTC+TGG | - | chr1_4:16081628-16081647 | None:intergenic | 35.0% | |
| GCATTTCTTTGAGTGTACTT+TGG | + | chr1_4:16081886-16081905 | Msa0153000:intron | 35.0% | |
| !!! | TGTACTTTGGTTTTGAACTC+CGG | + | chr1_4:16081899-16081918 | Msa0153000:intron | 35.0% |
| !! | AAAAGTACCGCATAAGCTTA+AGG | + | chr1_4:16081965-16081984 | Msa0153000:intron | 35.0% |
| TACAATGTGTTGTCAAATGG+CGG | + | chr1_4:16082191-16082210 | Msa0153000:intron | 35.0% | |
| ! | GAGAAGACCTATAGATTTTG+TGG | + | chr1_4:16082398-16082417 | Msa0153000:intron | 35.0% |
| ! | GACCTATAGATTTTGTGGTA+AGG | + | chr1_4:16082403-16082422 | Msa0153000:intron | 35.0% |
| CTCCTTACCACAAAATCTAT+AGG | - | chr1_4:16082408-16082427 | None:intergenic | 35.0% | |
| AAGGGTAGTCAAATCACTAA+AGG | + | chr1_4:16082441-16082460 | Msa0153000:intron | 35.0% | |
| GCACATCAAGTAAGATATGT+TGG | - | chr1_4:16082871-16082890 | None:intergenic | 35.0% | |
| GTTGTAAAGAAAGCAAGACT+TGG | - | chr1_4:16082893-16082912 | None:intergenic | 35.0% | |
| CTTTACAACATATGCACTTC+TGG | + | chr1_4:16082904-16082923 | Msa0153000:CDS | 35.0% | |
| TTACCAGGTAAGTTTGGTAT+TGG | + | chr1_4:16082949-16082968 | Msa0153000:intron | 35.0% | |
| !! | TCTTGGTGTGTTTTGTAGTT+TGG | + | chr1_4:16083005-16083024 | Msa0153000:intron | 35.0% |
| TGCAAAAACATTTAGCACAG+AGG | - | chr1_4:16083051-16083070 | None:intergenic | 35.0% | |
| !! | TCTGTGCTAAATGTTTTTGC+AGG | + | chr1_4:16083050-16083069 | Msa0153000:intron | 35.0% |
| ! | CACACAGCTCGATTAATTTT+TGG | + | chr1_4:16083202-16083221 | Msa0153000:intron | 35.0% |
| TGGATGTAACAGCGTTTATT+TGG | + | chr1_4:16083404-16083423 | Msa0153000:intron | 35.0% | |
| ATATGGAATAGTTTGGCACT+AGG | + | chr1_4:16083438-16083457 | Msa0153000:intron | 35.0% | |
| ! | CTCATTTTACTGAATTGTGG+GGG | + | chr1_4:16083526-16083545 | Msa0153000:intron | 35.0% |
| AAATGTTAGAATCCTCAGCA+AGG | - | chr1_4:16083577-16083596 | None:intergenic | 35.0% | |
| CTCAAATGGATAAATGCAGT+TGG | - | chr1_4:16083635-16083654 | None:intergenic | 35.0% | |
| CAACTGCATTTATCCATTTG+AGG | + | chr1_4:16083633-16083652 | Msa0153000:intron | 35.0% | |
| AAAGATGTTATGGTTGTGGA+TGG | - | chr1_4:16083916-16083935 | None:intergenic | 35.0% | |
| GCTGTCATTGCGTTATTTAA+AGG | - | chr1_4:16083962-16083981 | None:intergenic | 35.0% | |
| GATCTTGCAATGAACAGTAT+TGG | - | chr1_4:16084237-16084256 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCTAACAAAGCT+AGG | + | chr1_4:16084302-16084321 | Msa0153000:intron | 35.0% |
| !! | GAACCTAGCTTTGTTAGAAA+AGG | - | chr1_4:16084308-16084327 | None:intergenic | 35.0% |
| !! | GTAACTTGTTAAATGGAAGG+AGG | - | chr1_4:16084425-16084444 | None:intergenic | 35.0% |
| !! | GGAGTAACTTGTTAAATGGA+AGG | - | chr1_4:16084428-16084447 | None:intergenic | 35.0% |
| AATGATGAAGCTATAAGCGT+GGG | - | chr1_4:16084449-16084468 | None:intergenic | 35.0% | |
| TAATGATGAAGCTATAAGCG+TGG | - | chr1_4:16084450-16084469 | None:intergenic | 35.0% | |
| ACAGTATATTGATCTTGAGC+TGG | - | chr1_4:16084746-16084765 | None:intergenic | 35.0% | |
| GTACACGACCTTAAAATTCA+AGG | - | chr1_4:16084849-16084868 | None:intergenic | 35.0% | |
| TTACTTAGAAACATCTGGGA+AGG | + | chr1_4:16084931-16084950 | Msa0153000:intron | 35.0% | |
| GAGAAGTTTAATCCTAAGAG+AGG | + | chr1_4:16085000-16085019 | Msa0153000:intron | 35.0% | |
| GACGGTTTCCACAAATTAAT+AGG | + | chr1_4:16085037-16085056 | Msa0153000:intron | 35.0% | |
| TAGTTATAAGCACGTGAAAG+GGG | - | chr1_4:16085090-16085109 | None:intergenic | 35.0% | |
| GCAAAGAATCGTAATTTGGT+GGG | - | chr1_4:16085263-16085282 | None:intergenic | 35.0% | |
| TGCAAAGAATCGTAATTTGG+TGG | - | chr1_4:16085264-16085283 | None:intergenic | 35.0% | |
| GCATGCAAAGAATCGTAATT+TGG | - | chr1_4:16085267-16085286 | None:intergenic | 35.0% | |
| ATTACGATTCTTTGCATGCA+CGG | + | chr1_4:16085268-16085287 | Msa0153000:intron | 35.0% | |
| ! | TCAGGATCTGTTGTTTGTTA+AGG | + | chr1_4:16085421-16085440 | Msa0153000:intron | 35.0% |
| ! | CAGGATCTGTTGTTTGTTAA+GGG | + | chr1_4:16085422-16085441 | Msa0153000:intron | 35.0% |
| ! | AGGACATAACTGATAACGAT+AGG | - | chr1_4:16085499-16085518 | None:intergenic | 35.0% |
| AGAGATAAGTTTGAGTCTTG+AGG | - | chr1_4:16085519-16085538 | None:intergenic | 35.0% | |
| AAAAGAATCTTGTGTGCCAT+TGG | + | chr1_4:16085617-16085636 | Msa0153000:intron | 35.0% | |
| ! | CGGGTTTTTGCTAAGTAATA+TGG | + | chr1_4:16085888-16085907 | Msa0153000:intron | 35.0% |
| GCATGATCCTAATATGTGAT+TGG | - | chr1_4:16086069-16086088 | None:intergenic | 35.0% | |
| ! | AGTTTATTTGTTAGGGCCTT+AGG | + | chr1_4:16086100-16086119 | Msa0153000:intron | 35.0% |
| ! | GTTTATTTGTTAGGGCCTTA+GGG | + | chr1_4:16086101-16086120 | Msa0153000:intron | 35.0% |
| ! | TTTATTTGTTAGGGCCTTAG+GGG | + | chr1_4:16086102-16086121 | Msa0153000:intron | 35.0% |
| !! | TTCTGTTAGAGTACTGGTAT+TGG | + | chr1_4:16086130-16086149 | Msa0153000:intron | 35.0% |
| AACCATGAGAAAAACATTCG+AGG | - | chr1_4:16086180-16086199 | None:intergenic | 35.0% | |
| AGTCTACACAAAACCAGATA+GGG | - | chr1_4:16086471-16086490 | None:intergenic | 35.0% | |
| TAGTCTACACAAAACCAGAT+AGG | - | chr1_4:16086472-16086491 | None:intergenic | 35.0% | |
| CTATCTGCAGTCCAAATAAT+CGG | + | chr1_4:16086631-16086650 | Msa0153000:intron | 35.0% | |
| !! | TGCAATGTGTACCGATTATT+TGG | - | chr1_4:16086645-16086664 | None:intergenic | 35.0% |
| ATGTCAGATGAGGGTAATTT+AGG | - | chr1_4:16086693-16086712 | None:intergenic | 35.0% | |
| ! | GACTGAGGAGAGAATAATTT+TGG | - | chr1_4:16086798-16086817 | None:intergenic | 35.0% |
| !! | TATTTGGATTTTGAGGACTG+AGG | - | chr1_4:16086813-16086832 | None:intergenic | 35.0% |
| TATCAACGATCCACAATATC+AGG | - | chr1_4:16087071-16087090 | None:intergenic | 35.0% | |
| !! | TGATCTTCTAGTTTCACAGT+CGG | + | chr1_4:16087228-16087247 | Msa0153000:intron | 35.0% |
| TTCACAGTTCACTTAATGGT+TGG | - | chr1_4:16087258-16087277 | None:intergenic | 35.0% | |
| AACCATTAAGTGAACTGTGA+AGG | + | chr1_4:16087257-16087276 | Msa0153000:intron | 35.0% | |
| TGTTGGAATAGGTAATTGAG+TGG | + | chr1_4:16087370-16087389 | Msa0153000:intron | 35.0% | |
| TTTCACCAGTTTCCTTATAG+GGG | - | chr1_4:16087410-16087429 | None:intergenic | 35.0% | |
| GATTTCACCAGTTTCCTTAT+AGG | - | chr1_4:16087412-16087431 | None:intergenic | 35.0% | |
| TAATTAGGCTAAATCCCTAG+TGG | - | chr1_4:16087441-16087460 | None:intergenic | 35.0% | |
| ! | GGTATCAGAGCTTATCTTTT+TGG | + | chr1_4:16087538-16087557 | Msa0153000:intron | 35.0% |
| TTAGAGTGTGTACAAATGAG+TGG | - | chr1_4:16087565-16087584 | None:intergenic | 35.0% | |
| ! | CACTCTAAATGTCGTGTTTT+TGG | + | chr1_4:16087577-16087596 | Msa0153000:intron | 35.0% |
| !!! | CGTGTTTTTGGTATATTAGC+GGG | + | chr1_4:16087589-16087608 | Msa0153000:intron | 35.0% |
| GAGATATATAGCCTAGATCA+CGG | - | chr1_4:16087696-16087715 | None:intergenic | 35.0% | |
| GGCAAGACAAGATATATAGA+AGG | + | chr1_4:16087734-16087753 | Msa0153000:intron | 35.0% | |
| !! | GCTATTTTCTTCCCATGTTT+AGG | + | chr1_4:16087761-16087780 | Msa0153000:intron | 35.0% |
| ! | TCTTCCCATGTTTAGGTTAT+AGG | + | chr1_4:16087768-16087787 | Msa0153000:intron | 35.0% |
| TGGAAAGGTAAATGAGAGAA+TGG | + | chr1_4:16087823-16087842 | Msa0153000:intron | 35.0% | |
| !!! | AGTGATGTTTCTTTTCAGGT+TGG | + | chr1_4:16087918-16087937 | Msa0153000:intron | 35.0% |
| TCACCATAACACTTCTGATA+AGG | - | chr1_4:16087974-16087993 | None:intergenic | 35.0% | |
| GAACACAAAAAAACCTTACC+AGG | - | chr1_4:16088150-16088169 | None:intergenic | 35.0% | |
| ATCCTAACTAGATCCAAAAG+GGG | - | chr1_4:16088240-16088259 | None:intergenic | 35.0% | |
| TCCATAAATCTGTGTTTGTG+TGG | + | chr1_4:16088351-16088370 | Msa0153000:intron | 35.0% | |
| AAAAGGGTAAGAGGAATAGT+GGG | - | chr1_4:16088397-16088416 | None:intergenic | 35.0% | |
| ! | AAAAGTGTGAAAAGGGTAAG+AGG | - | chr1_4:16088406-16088425 | None:intergenic | 35.0% |
| ! | CTGCAACAAAAGTGTGAAAA+GGG | - | chr1_4:16088413-16088432 | None:intergenic | 35.0% |
| ! | ACTGCAACAAAAGTGTGAAA+AGG | - | chr1_4:16088414-16088433 | None:intergenic | 35.0% |
| ! | TTTCACACTTTTGTTGCAGT+TGG | + | chr1_4:16088414-16088433 | Msa0153000:intron | 35.0% |
| ! | TTCAATCTTTTCAGCGAATC+GGG | - | chr1_4:16088516-16088535 | None:intergenic | 35.0% |
| AGTGACAAAGCTTGTATCAT+GGG | + | chr1_4:16088643-16088662 | Msa0153000:three_prime_UTR | 35.0% | |
| GTATGTGCACGTGTATGAAT+GGG | - | chr1_4:16081106-16081125 | None:intergenic | 40.0% | |
| TGTATGTGCACGTGTATGAA+TGG | - | chr1_4:16081107-16081126 | None:intergenic | 40.0% | |
| !! | ATGAGAAGGTACCAAAGCTA+TGG | - | chr1_4:16081428-16081447 | None:intergenic | 40.0% |
| TGAGAGTTCCAGAATATGGT+TGG | + | chr1_4:16081597-16081616 | Msa0153000:CDS | 40.0% | |
| ! | CTCAATTTTGTGGTGAATGC+AGG | + | chr1_4:16081644-16081663 | Msa0153000:CDS | 40.0% |
| TCTTCTTTCGGAATGTACAG+AGG | + | chr1_4:16081805-16081824 | Msa0153000:CDS | 40.0% | |
| !! | TCAATGATGGATAGTACCTC+TGG | - | chr1_4:16081837-16081856 | None:intergenic | 40.0% |
| !!! | GTACTTTGGTTTTGAACTCC+GGG | + | chr1_4:16081900-16081919 | Msa0153000:intron | 40.0% |
| !!! | TACTTTGGTTTTGAACTCCG+GGG | + | chr1_4:16081901-16081920 | Msa0153000:intron | 40.0% |
| TGCTGTATGAGATAGAGTGT+TGG | + | chr1_4:16082020-16082039 | Msa0153000:intron | 40.0% | |
| ! | GCTGTATGAGATAGAGTGTT+GGG | + | chr1_4:16082021-16082040 | Msa0153000:intron | 40.0% |
| CCAACGCAACATTCTAATCT+CGG | - | chr1_4:16082083-16082102 | None:intergenic | 40.0% | |
| AGTCCAGTGTTGTCAAATAG+CGG | + | chr1_4:16082113-16082132 | Msa0153000:intron | 40.0% | |
| TTACCCAATGTTGTCAACCA+CGG | - | chr1_4:16082279-16082298 | None:intergenic | 40.0% | |
| ATTAGACATGGGGACATTAG+AGG | + | chr1_4:16082315-16082334 | Msa0153000:intron | 40.0% | |
| TTAGACATGGGGACATTAGA+GGG | + | chr1_4:16082316-16082335 | Msa0153000:intron | 40.0% | |
| CTTATCATACTAAGTGGAGC+TGG | - | chr1_4:16082583-16082602 | None:intergenic | 40.0% | |
| CAGCTCCACTTAGTATGATA+AGG | + | chr1_4:16082581-16082600 | Msa0153000:intron | 40.0% | |
| ! | CCAAGCCTTATCATACTAAG+TGG | - | chr1_4:16082589-16082608 | None:intergenic | 40.0% |
| CCACTTAGTATGATAAGGCT+TGG | + | chr1_4:16082586-16082605 | Msa0153000:intron | 40.0% | |
| ACTCCAATACCAAACTTACC+TGG | - | chr1_4:16082955-16082974 | None:intergenic | 40.0% | |
| TGTTGTGGTTTATGCTGTTC+AGG | + | chr1_4:16083122-16083141 | Msa0153000:CDS | 40.0% | |
| ATTTGGCGACTGGATTGATA+TGG | + | chr1_4:16083421-16083440 | Msa0153000:intron | 40.0% | |
| ! | GCAGCAGTTTTACTTTCACT+AGG | - | chr1_4:16084041-16084060 | None:intergenic | 40.0% |
| !! | TGCTGCTTTAAGTGCAAAAC+TGG | + | chr1_4:16084055-16084074 | Msa0153000:intron | 40.0% |
| ! | GCTTTAAGTGCAAAACTGGA+TGG | + | chr1_4:16084059-16084078 | Msa0153000:intron | 40.0% |
| AGTGGCAATATGCAATCATC+AGG | - | chr1_4:16084194-16084213 | None:intergenic | 40.0% | |
| GATCATGATCGTAGAGACAA+AGG | + | chr1_4:16084253-16084272 | Msa0153000:intron | 40.0% | |
| !! | CGTGGGAGTAACTTGTTAAA+TGG | - | chr1_4:16084432-16084451 | None:intergenic | 40.0% |
| TAATAGATGCTAGAGGTGAC+TGG | - | chr1_4:16084599-16084618 | None:intergenic | 40.0% | |
| GGAATTACGTACAAGTTGTG+TGG | - | chr1_4:16084650-16084669 | None:intergenic | 40.0% | |
| CAAACTATGGTACTGTCTAC+AGG | + | chr1_4:16084769-16084788 | Msa0153000:intron | 40.0% | |
| ! | CTCCACCACCTTGAATTTTA+AGG | + | chr1_4:16084838-16084857 | Msa0153000:intron | 40.0% |
| GACCTTAAAATTCAAGGTGG+TGG | - | chr1_4:16084843-16084862 | None:intergenic | 40.0% | |
| CACGACCTTAAAATTCAAGG+TGG | - | chr1_4:16084846-16084865 | None:intergenic | 40.0% | |
| TTAATCCTAAGAGAGGGAGT+AGG | + | chr1_4:16085007-16085026 | Msa0153000:intron | 40.0% | |
| AGTTATAAGCACGTGAAAGG+GGG | - | chr1_4:16085089-16085108 | None:intergenic | 40.0% | |
| ATAACAGCTGTTCACAGATC+AGG | - | chr1_4:16085168-16085187 | None:intergenic | 40.0% | |
| ! | GAAGAGTACAGTCAAGATCA+CGG | - | chr1_4:16085354-16085373 | None:intergenic | 40.0% |
| TAAGGGTCTGTTAACAGTTC+AGG | + | chr1_4:16085439-16085458 | Msa0153000:intron | 40.0% | |
| CGTACTAGTCATTCTGTCTA+AGG | + | chr1_4:16085795-16085814 | Msa0153000:CDS | 40.0% | |
| TGGTATACATGTTGCAACAG+CGG | + | chr1_4:16085908-16085927 | Msa0153000:intron | 40.0% | |
| ! | TTTCTTTGTTTGCTGCCCTT+GGG | + | chr1_4:16085931-16085950 | Msa0153000:CDS | 40.0% |
| CAACTCCCCTTGATGTAATT+TGG | + | chr1_4:16086011-16086030 | Msa0153000:intron | 40.0% | |
| GCACATTTCTGTTAGAGTAC+TGG | + | chr1_4:16086124-16086143 | Msa0153000:intron | 40.0% | |
| ! | GTCCTCGAATGTTTTTCTCA+TGG | + | chr1_4:16086175-16086194 | Msa0153000:intron | 40.0% |
| !! | GTATCACTGATTTCCCTATC+TGG | + | chr1_4:16086455-16086474 | Msa0153000:intron | 40.0% |
| GCTTTCCTGTTGAATCCAAA+GGG | + | chr1_4:16086508-16086527 | Msa0153000:CDS | 40.0% | |
| TAATAACTGCCACCATAGCA+GGG | + | chr1_4:16087118-16087137 | Msa0153000:intron | 40.0% | |
| CCTCTTGCTAATAGAAGGTA+AGG | - | chr1_4:16087186-16087205 | None:intergenic | 40.0% | |
| CCTTACCTTCTATTAGCAAG+AGG | + | chr1_4:16087183-16087202 | Msa0153000:intron | 40.0% | |
| ATCGACCTCTTGCTAATAGA+AGG | - | chr1_4:16087191-16087210 | None:intergenic | 40.0% | |
| AGCCTTCACAGTTCACTTAA+TGG | - | chr1_4:16087262-16087281 | None:intergenic | 40.0% | |
| !! | TATTAGTGGGGTGTTGGAAT+AGG | + | chr1_4:16087359-16087378 | Msa0153000:intron | 40.0% |
| TTCACCAGTTTCCTTATAGG+GGG | - | chr1_4:16087409-16087428 | None:intergenic | 40.0% | |
| GTGAAATCACACATCCACTA+GGG | + | chr1_4:16087424-16087443 | Msa0153000:intron | 40.0% | |
| TAGCCTAATTAGTCCTTCCA+AGG | + | chr1_4:16087450-16087469 | Msa0153000:intron | 40.0% | |
| AGCCTAATTAGTCCTTCCAA+GGG | + | chr1_4:16087451-16087470 | Msa0153000:intron | 40.0% | |
| AACCCTTGGAAGGACTAATT+AGG | - | chr1_4:16087456-16087475 | None:intergenic | 40.0% | |
| AGAAATTCTCAACCCTTGGA+AGG | - | chr1_4:16087466-16087485 | None:intergenic | 40.0% | |
| AATCTCAAAAGCTAGCTCAG+GGG | - | chr1_4:16087492-16087511 | None:intergenic | 40.0% | |
| CAATCTCAAAAGCTAGCTCA+GGG | - | chr1_4:16087493-16087512 | None:intergenic | 40.0% | |
| TCAATCTCAAAAGCTAGCTC+AGG | - | chr1_4:16087494-16087513 | None:intergenic | 40.0% | |
| !!! | GCTAGCTTTTGAGATTGAGT+TGG | + | chr1_4:16087496-16087515 | Msa0153000:intron | 40.0% |
| GGATCATGCAGATTCTTAGA+TGG | + | chr1_4:16087517-16087536 | Msa0153000:intron | 40.0% | |
| ACTGGAGTATGTAGAAATGC+GGG | - | chr1_4:16087642-16087661 | None:intergenic | 40.0% | |
| CACTGGAGTATGTAGAAATG+CGG | - | chr1_4:16087643-16087662 | None:intergenic | 40.0% | |
| CTCATCACACAACAGAATAG+CGG | + | chr1_4:16087713-16087732 | Msa0153000:intron | 40.0% | |
| AAACGCGAACCTTAATGTGA+TGG | + | chr1_4:16088096-16088115 | Msa0153000:CDS | 40.0% | |
| TAGGATGGTCCATCACATTA+AGG | - | chr1_4:16088108-16088127 | None:intergenic | 40.0% | |
| TCTAGTTAGGATATTGGGTG+TGG | + | chr1_4:16088248-16088267 | Msa0153000:intron | 40.0% | |
| CTAGTTAGGATATTGGGTGT+GGG | + | chr1_4:16088249-16088268 | Msa0153000:intron | 40.0% | |
| GCCACACAAACACAGATTTA+TGG | - | chr1_4:16088355-16088374 | None:intergenic | 40.0% | |
| GAAAAGGGTAAGAGGAATAG+TGG | - | chr1_4:16088398-16088417 | None:intergenic | 40.0% | |
| TATTGTGTGATACCACGCTT+TGG | - | chr1_4:16088490-16088509 | None:intergenic | 40.0% | |
| !! | CACTGATTGCTCCTTTTTCT+CGG | - | chr1_4:16088543-16088562 | None:intergenic | 40.0% |
| ! | GCTGATTCTCATAGTCCAAA+GGG | + | chr1_4:16088579-16088598 | Msa0153000:three_prime_UTR | 40.0% |
| GAGTGACAAAGCTTGTATCA+TGG | + | chr1_4:16088642-16088661 | Msa0153000:three_prime_UTR | 40.0% | |
| !! | GAGGTGTTGTTGGTCATTGT+GGG | - | chr1_4:16081256-16081275 | None:intergenic | 45.0% |
| !! | AGAAGGTACCAAAGCTATGG+CGG | - | chr1_4:16081425-16081444 | None:intergenic | 45.0% |
| TGGGTAGTCCAACCATATTC+TGG | - | chr1_4:16081608-16081627 | None:intergenic | 45.0% | |
| ATATGGTTGGACTACCCAGA+AGG | + | chr1_4:16081610-16081629 | Msa0153000:CDS | 45.0% | |
| ATACAGCATCGCCCATCTTA+AGG | - | chr1_4:16082008-16082027 | None:intergenic | 45.0% | |
| CCGAGATTAGAATGTTGCGT+TGG | + | chr1_4:16082080-16082099 | Msa0153000:intron | 45.0% | |
| AGAATGTTGCGTTGGATGTG+TGG | + | chr1_4:16082088-16082107 | Msa0153000:intron | 45.0% | |
| TAGCCGCTATTTGACAACAC+TGG | - | chr1_4:16082119-16082138 | None:intergenic | 45.0% | |
| ATGTTGTCAACCACGGATCA+CGG | - | chr1_4:16082272-16082291 | None:intergenic | 45.0% | |
| TGATCCGTGGTTGACAACAT+TGG | + | chr1_4:16082272-16082291 | Msa0153000:intron | 45.0% | |
| GATCCGTGGTTGACAACATT+GGG | + | chr1_4:16082273-16082292 | Msa0153000:intron | 45.0% | |
| GGGACATTAGAGGGAAAGTT+GGG | + | chr1_4:16082325-16082344 | Msa0153000:intron | 45.0% | |
| GGACATTAGAGGGAAAGTTG+GGG | + | chr1_4:16082326-16082345 | Msa0153000:intron | 45.0% | |
| !! | ATGCACTTCTGGTCTTGTTC+TGG | + | chr1_4:16082915-16082934 | Msa0153000:CDS | 45.0% |
| !! | TGCACTTCTGGTCTTGTTCT+GGG | + | chr1_4:16082916-16082935 | Msa0153000:CDS | 45.0% |
| CTGGGCTGAGATTTATTACC+AGG | + | chr1_4:16082934-16082953 | Msa0153000:CDS | 45.0% | |
| AACAGCGTTTATTTGGCGAC+TGG | + | chr1_4:16083411-16083430 | Msa0153000:intron | 45.0% | |
| ACTGAATTGTGGGGGACATT+TGG | + | chr1_4:16083534-16083553 | Msa0153000:intron | 45.0% | |
| TGGTCACTGTTGTCAAGTAG+AGG | + | chr1_4:16083782-16083801 | Msa0153000:intron | 45.0% | |
| AGGCGCTTAATGATGAGCAA+AGG | - | chr1_4:16084348-16084367 | None:intergenic | 45.0% | |
| AGTGACAACATACAGGACAC+AGG | - | chr1_4:16084368-16084387 | None:intergenic | 45.0% | |
| TCCAGCTGTATCTTGCAGTT+TGG | + | chr1_4:16084519-16084538 | Msa0153000:intron | 45.0% | |
| ACCAAACTGCAAGATACAGC+TGG | - | chr1_4:16084523-16084542 | None:intergenic | 45.0% | |
| TACGTACAAGTTGTGTGGCA+AGG | - | chr1_4:16084645-16084664 | None:intergenic | 45.0% | |
| TGGTCACACACAGTGTCTAT+AGG | - | chr1_4:16084808-16084827 | None:intergenic | 45.0% | |
| CTGTGTGTGACCACTTTCTA+AGG | + | chr1_4:16084815-16084834 | Msa0153000:intron | 45.0% | |
| CATATCCTACTCCCTCTCTT+AGG | - | chr1_4:16085015-16085034 | None:intergenic | 45.0% | |
| AAGAGAGGGAGTAGGATATG+TGG | + | chr1_4:16085015-16085034 | Msa0153000:intron | 45.0% | |
| !! | ACACAGTTCTCCTGGTTCTA+CGG | + | chr1_4:16085217-16085236 | Msa0153000:intron | 45.0% |
| ! | TCGTAATTTGGTGGGAAGCT+GGG | - | chr1_4:16085255-16085274 | None:intergenic | 45.0% |
| ! | ATCGTAATTTGGTGGGAAGC+TGG | - | chr1_4:16085256-16085275 | None:intergenic | 45.0% |
| AATCGTGCGATTCTGTGAAC+AGG | - | chr1_4:16085304-16085323 | None:intergenic | 45.0% | |
| AGAATGACTAGTACGCTGAC+TGG | - | chr1_4:16085790-16085809 | None:intergenic | 45.0% | |
| ! | CTGTCTAAGGTGTTCTTTGC+AGG | + | chr1_4:16085808-16085827 | Msa0153000:CDS | 45.0% |
| ! | GTTTCTTTGTTTGCTGCCCT+TGG | + | chr1_4:16085930-16085949 | Msa0153000:CDS | 45.0% |
| ACCGTAGAGAAGAAACCCAA+GGG | - | chr1_4:16085949-16085968 | None:intergenic | 45.0% | |
| CTAACAGAAATGTGCCCCTA+AGG | - | chr1_4:16086119-16086138 | None:intergenic | 45.0% | |
| CGCTTTCCTGTTGAATCCAA+AGG | + | chr1_4:16086507-16086526 | Msa0153000:CDS | 45.0% | |
| ! | CAAGAGGTATGCAATCTGAC+AGG | + | chr1_4:16086546-16086565 | Msa0153000:intron | 45.0% |
| GTAATAACTGCCACCATAGC+AGG | + | chr1_4:16087117-16087136 | Msa0153000:intron | 45.0% | |
| AAGAGCTATTAGTGGGGTGT+TGG | + | chr1_4:16087353-16087372 | Msa0153000:intron | 45.0% | |
| GGTGAAATCACACATCCACT+AGG | + | chr1_4:16087423-16087442 | Msa0153000:intron | 45.0% | |
| ATCTCAAAAGCTAGCTCAGG+GGG | - | chr1_4:16087491-16087510 | None:intergenic | 45.0% | |
| ATAAAGGAGGAGAGAGAGAG+TGG | + | chr1_4:16087803-16087822 | Msa0153000:intron | 45.0% | |
| !! | GTAAGATTGGTGACCCCTTT+TGG | + | chr1_4:16088224-16088243 | Msa0153000:intron | 45.0% |
| ! | GACCCCTTTTGGATCTAGTT+AGG | + | chr1_4:16088235-16088254 | Msa0153000:intron | 45.0% |
| ATCTCAGTTGGTTACCAAGG+GGG | - | chr1_4:16088306-16088325 | None:intergenic | 45.0% | |
| CATCTCAGTTGGTTACCAAG+GGG | - | chr1_4:16088307-16088326 | None:intergenic | 45.0% | |
| GCATCTCAGTTGGTTACCAA+GGG | - | chr1_4:16088308-16088327 | None:intergenic | 45.0% | |
| TAACCAACTGAGATGCCACT+CGG | + | chr1_4:16088312-16088331 | Msa0153000:intron | 45.0% | |
| ! | CACACTTTTGTTGCAGTTGG+TGG | + | chr1_4:16088417-16088436 | Msa0153000:intron | 45.0% |
| CGAGAAAAAGGAGCAATCAG+TGG | + | chr1_4:16088541-16088560 | Msa0153000:three_prime_UTR | 45.0% | |
| ! | GGCTGATTCTCATAGTCCAA+AGG | + | chr1_4:16088578-16088597 | Msa0153000:three_prime_UTR | 45.0% |
| !!! | TTTTAAAAATTTGAAAAATA+TGG | + | chr1_4:16083672-16083691 | Msa0153000:intron | 5.0% |
| !! | TTGAAATAAAAAATAATAAA+AGG | - | chr1_4:16084001-16084020 | None:intergenic | 5.0% |
| GCACGTGTATGAATGGGACA+AGG | - | chr1_4:16081100-16081119 | None:intergenic | 50.0% | |
| TGCTAGGGGCTAAGATTGGT+GGG | - | chr1_4:16081141-16081160 | None:intergenic | 50.0% | |
| TTGCTAGGGGCTAAGATTGG+TGG | - | chr1_4:16081142-16081161 | None:intergenic | 50.0% | |
| ! | TGCTTGCTAGGGGCTAAGAT+TGG | - | chr1_4:16081145-16081164 | None:intergenic | 50.0% |
| GTCATTGTGGGAACGATCGA+CGG | - | chr1_4:16081244-16081263 | None:intergenic | 50.0% | |
| !! | CGAGGTGTTGTTGGTCATTG+TGG | - | chr1_4:16081257-16081276 | None:intergenic | 50.0% |
| !! | AACTCACCGATTCCTCAACC+TGG | + | chr1_4:16081323-16081342 | Msa0153000:CDS | 50.0% |
| ! | GTTCCACCAGGTTGAGGAAT+CGG | - | chr1_4:16081332-16081351 | None:intergenic | 50.0% |
| GAACGACATCGACGATTCTC+CGG | + | chr1_4:16081348-16081367 | Msa0153000:CDS | 50.0% | |
| ACATCGACGATTCTCCGGTT+TGG | + | chr1_4:16081353-16081372 | Msa0153000:CDS | 50.0% | |
| AAGATGCGGTCTTGCCAAAC+CGG | - | chr1_4:16081370-16081389 | None:intergenic | 50.0% | |
| TGTACAGAGGTTACAGCCAG+AGG | + | chr1_4:16081818-16081837 | Msa0153000:CDS | 50.0% | |
| !!! | TTTGGTTTTGAACTCCGGGG+TGG | + | chr1_4:16081904-16081923 | Msa0153000:intron | 50.0% |
| GCTGTAGCACTGTTGCATAG+CGG | + | chr1_4:16082224-16082243 | Msa0153000:intron | 50.0% | |
| CCACGGATCACGGAAAATAG+CGG | - | chr1_4:16082262-16082281 | None:intergenic | 50.0% | |
| GGGGACATTAGAGGGAAAGT+TGG | + | chr1_4:16082324-16082343 | Msa0153000:intron | 50.0% | |
| ACTAAGTGGAGCTGGCTACA+TGG | - | chr1_4:16082575-16082594 | None:intergenic | 50.0% | |
| ACTTGGCTTCAGTCCATCAG+TGG | - | chr1_4:16083088-16083107 | None:intergenic | 50.0% | |
| AAAATCCACCGCAGTGCACA+TGG | - | chr1_4:16083808-16083827 | None:intergenic | 50.0% | |
| CTGCTATGGCCTGTGTATGA+AGG | + | chr1_4:16083838-16083857 | Msa0153000:intron | 50.0% | |
| TATGGCCTGTGTATGAAGGC+TGG | + | chr1_4:16083842-16083861 | Msa0153000:intron | 50.0% | |
| TATGAAGGCTGGTGGCACAA+TGG | + | chr1_4:16083853-16083872 | Msa0153000:intron | 50.0% | |
| ! | TGGCGGAAATGGCCTGTTTT+TGG | + | chr1_4:16083873-16083892 | Msa0153000:intron | 50.0% |
| ! | CATGGTGGAAGGCCAAAAAC+AGG | - | chr1_4:16083888-16083907 | None:intergenic | 50.0% |
| !!! | CTGTTTTTGGCCTTCCACCA+TGG | + | chr1_4:16083886-16083905 | Msa0153000:intron | 50.0% |
| CTATGGTACTGTCTACAGGC+AGG | + | chr1_4:16084773-16084792 | Msa0153000:intron | 50.0% | |
| GAGGGAGTAGGATATGTGGA+CGG | + | chr1_4:16085019-16085038 | Msa0153000:intron | 50.0% | |
| TGCGCAGACGCAAACAGAAT+CGG | + | chr1_4:16085187-16085206 | Msa0153000:intron | 50.0% | |
| CAGACGCAAACAGAATCGGA+CGG | + | chr1_4:16085191-16085210 | Msa0153000:intron | 50.0% | |
| CACACAGAAACCGTAGAACC+AGG | - | chr1_4:16085230-16085249 | None:intergenic | 50.0% | |
| !! | CTGGTTCTACGGTTTCTGTG+TGG | + | chr1_4:16085228-16085247 | Msa0153000:intron | 50.0% |
| ! | CGTAATTTGGTGGGAAGCTG+GGG | - | chr1_4:16085254-16085273 | None:intergenic | 50.0% |
| TGCGATTCTGTGAACAGGCT+AGG | - | chr1_4:16085299-16085318 | None:intergenic | 50.0% | |
| GCCCTTGGGTTTCTTCTCTA+CGG | + | chr1_4:16085945-16085964 | Msa0153000:CDS | 50.0% | |
| CACCGTAGAGAAGAAACCCA+AGG | - | chr1_4:16085950-16085969 | None:intergenic | 50.0% | |
| CTTGGGTTTCTTCTCTACGG+TGG | + | chr1_4:16085948-16085967 | Msa0153000:CDS | 50.0% | |
| GGTTTCTTCTCTACGGTGGA+AGG | + | chr1_4:16085952-16085971 | Msa0153000:CDS | 50.0% | |
| TTCTCTAGACCCTGCTATGG+TGG | - | chr1_4:16087130-16087149 | None:intergenic | 50.0% | |
| ACCATAGCAGGGTCTAGAGA+AGG | + | chr1_4:16087129-16087148 | Msa0153000:intron | 50.0% | |
| CCATAGCAGGGTCTAGAGAA+GGG | + | chr1_4:16087130-16087149 | Msa0153000:intron | 50.0% | |
| GAGAAGGGTTAAACCTCCTG+TGG | + | chr1_4:16087145-16087164 | Msa0153000:intron | 50.0% | |
| GGGTTAAACCTCCTGTGGTA+CGG | + | chr1_4:16087150-16087169 | Msa0153000:intron | 50.0% | |
| GAATACAACCGTACCACAGG+AGG | - | chr1_4:16087161-16087180 | None:intergenic | 50.0% | |
| GCTGAATACAACCGTACCAC+AGG | - | chr1_4:16087164-16087183 | None:intergenic | 50.0% | |
| GGGCAGAAATTCTCAACCCT+TGG | - | chr1_4:16087470-16087489 | None:intergenic | 50.0% | |
| TCTCAAAAGCTAGCTCAGGG+GGG | - | chr1_4:16087490-16087509 | None:intergenic | 50.0% | |
| AGATCACGGCTGCTTAGAAG+CGG | - | chr1_4:16087682-16087701 | None:intergenic | 50.0% | |
| CTTCTAAGCAGCCGTGATCT+AGG | + | chr1_4:16087682-16087701 | Msa0153000:intron | 50.0% | |
| GGATATTGGGTGTGGGTTCA+TGG | + | chr1_4:16088256-16088275 | Msa0153000:intron | 50.0% | |
| GGCATCTCAGTTGGTTACCA+AGG | - | chr1_4:16088309-16088328 | None:intergenic | 50.0% | |
| TGAGATGCCACTCGGCTAAA+AGG | + | chr1_4:16088320-16088339 | Msa0153000:intron | 50.0% | |
| ! | TAAACGGCCTTTTAGCCGAG+TGG | - | chr1_4:16088330-16088349 | None:intergenic | 50.0% |
| TGTGTGATACCACGCTTTGG+TGG | - | chr1_4:16088487-16088506 | None:intergenic | 50.0% | |
| GGAACGATCGACGGAGTTTG+GGG | - | chr1_4:16081235-16081254 | None:intergenic | 55.0% | |
| GGGAACGATCGACGGAGTTT+GGG | - | chr1_4:16081236-16081255 | None:intergenic | 55.0% | |
| TGGGAACGATCGACGGAGTT+TGG | - | chr1_4:16081237-16081256 | None:intergenic | 55.0% | |
| !! | TCACCGATTCCTCAACCTGG+TGG | + | chr1_4:16081326-16081345 | Msa0153000:CDS | 55.0% |
| GATGTCGTTCCACCAGGTTG+AGG | - | chr1_4:16081338-16081357 | None:intergenic | 55.0% | |
| ATCGTCGATGTCGTTCCACC+AGG | - | chr1_4:16081344-16081363 | None:intergenic | 55.0% | |
| CGTCGTTTCCGCCATAGCTT+TGG | + | chr1_4:16081414-16081433 | Msa0153000:CDS | 55.0% | |
| GAACTCCGGGGTGGTTGAAA+TGG | + | chr1_4:16081913-16081932 | Msa0153000:intron | 55.0% | |
| TCCGGGGTGGTTGAAATGGA+GGG | + | chr1_4:16081917-16081936 | Msa0153000:intron | 55.0% | |
| !! | CCGCTATTTTCCGTGATCCG+TGG | + | chr1_4:16082259-16082278 | Msa0153000:intron | 55.0% |
| GCACGTGCTGTATCCACTGA+TGG | + | chr1_4:16083072-16083091 | Msa0153000:CDS | 55.0% | |
| GGCACTAGGCTCGAAAGTCA+AGG | + | chr1_4:16083452-16083471 | Msa0153000:intron | 55.0% | |
| AGTAGAGGCCATGTGCACTG+CGG | + | chr1_4:16083797-16083816 | Msa0153000:intron | 55.0% | |
| TGCCACCAGCCTTCATACAC+AGG | - | chr1_4:16083850-16083869 | None:intergenic | 55.0% | |
| ! | TGGTGGCACAATGGCGGAAA+TGG | + | chr1_4:16083862-16083881 | Msa0153000:intron | 55.0% |
| TTGTGGATGGCTGACCATGG+TGG | - | chr1_4:16083903-16083922 | None:intergenic | 55.0% | |
| TGGTTGTGGATGGCTGACCA+TGG | - | chr1_4:16083906-16083925 | None:intergenic | 55.0% | |
| GAGCTGGAATGCGAGTCACT+TGG | - | chr1_4:16084730-16084749 | None:intergenic | 55.0% | |
| !! | GGTGGTGGAGCCTTAGAAAG+TGG | - | chr1_4:16084828-16084847 | None:intergenic | 55.0% |
| GCAGTGCATAGCAGCAGTGA+CGG | + | chr1_4:16084953-16084972 | Msa0153000:intron | 55.0% | |
| CGACGCCCTTTGGATTCAAC+AGG | - | chr1_4:16086516-16086535 | None:intergenic | 55.0% | |
| CAGCTTCTTACGACGCCCTT+TGG | - | chr1_4:16086526-16086545 | None:intergenic | 55.0% | |
| GCGTCGTAAGAAGCTGCAAG+AGG | + | chr1_4:16086530-16086549 | Msa0153000:CDS | 55.0% | |
| CCCTTCTCTAGACCCTGCTA+TGG | - | chr1_4:16087133-16087152 | None:intergenic | 55.0% | |
| CAACAACCTCGCCCCCTATA+AGG | + | chr1_4:16087395-16087414 | Msa0153000:intron | 55.0% | |
| CAGTTTCCTTATAGGGGGCG+AGG | - | chr1_4:16087404-16087423 | None:intergenic | 55.0% | |
| CTCGCCCCCTATAAGGAAAC+TGG | + | chr1_4:16087402-16087421 | Msa0153000:intron | 55.0% | |
| GGAGGAGAGAGAGAGTGGAA+AGG | + | chr1_4:16087808-16087827 | Msa0153000:intron | 55.0% | |
| GTTGGTTACCAAGGGGGATG+TGG | - | chr1_4:16088300-16088319 | None:intergenic | 55.0% | |
| TAGCCGAGTGGCATCTCAGT+TGG | - | chr1_4:16088318-16088337 | None:intergenic | 55.0% | |
| AGGAAGCTTCCACCAAAGCG+TGG | + | chr1_4:16088475-16088494 | Msa0153000:CDS | 55.0% | |
| CAACAACACCTCGCCGTCGT+CGG | + | chr1_4:16081264-16081283 | Msa0153000:CDS | 60.0% | |
| ! | CGGCGAGGGTGTAGAAGATG+CGG | - | chr1_4:16081384-16081403 | None:intergenic | 60.0% |
| CGCATCTTCTACACCCTCGC+CGG | + | chr1_4:16081382-16081401 | Msa0153000:CDS | 60.0% | |
| TACACCCTCGCCGGCCTTTA+CGG | + | chr1_4:16081391-16081410 | Msa0153000:CDS | 60.0% | |
| GGAAACGACGCCGTAAAGGC+CGG | - | chr1_4:16081404-16081423 | None:intergenic | 60.0% | |
| TGGCGGAAACGACGCCGTAA+AGG | - | chr1_4:16081408-16081427 | None:intergenic | 60.0% | |
| CTCCGGGGTGGTTGAAATGG+AGG | + | chr1_4:16081916-16081935 | Msa0153000:intron | 60.0% | |
| CCCCTCCATTTCAACCACCC+CGG | - | chr1_4:16081921-16081940 | None:intergenic | 60.0% | |
| CCGGGGTGGTTGAAATGGAG+GGG | + | chr1_4:16081918-16081937 | Msa0153000:intron | 60.0% | |
| CGGGGTGGTTGAAATGGAGG+GGG | + | chr1_4:16081919-16081938 | Msa0153000:intron | 60.0% | |
| GGGGTGGTTGAAATGGAGGG+GGG | + | chr1_4:16081920-16081939 | Msa0153000:intron | 60.0% | |
| TTGAAATGGAGGGGGGCCGA+TGG | + | chr1_4:16081927-16081946 | Msa0153000:intron | 60.0% | |
| TGAAATGGAGGGGGGCCGAT+GGG | + | chr1_4:16081928-16081947 | Msa0153000:intron | 60.0% | |
| GGCCTGTGTATGAAGGCTGG+TGG | + | chr1_4:16083845-16083864 | Msa0153000:intron | 60.0% | |
| GAAGGCTGGTGGCACAATGG+CGG | + | chr1_4:16083856-16083875 | Msa0153000:intron | 60.0% | |
| ! | GGATGGCTGACCATGGTGGA+AGG | - | chr1_4:16083899-16083918 | None:intergenic | 60.0% |
| AAGCACGTGAAAGGGGGCGA+CGG | - | chr1_4:16085083-16085102 | None:intergenic | 60.0% | |
| CACAGATCAGGTCTGCGACC+TGG | - | chr1_4:16085156-16085175 | None:intergenic | 60.0% | |
| GACGGTGCACACAGTTCTCC+TGG | + | chr1_4:16085209-16085228 | Msa0153000:intron | 60.0% | |
| CAAGGGGGATGTGGTGTTCG+AGG | - | chr1_4:16088291-16088310 | None:intergenic | 60.0% | |
| CTCGAACACCACATCCCCCT+TGG | + | chr1_4:16088289-16088308 | Msa0153000:intron | 60.0% | |
| !! | CGACGACGGCGAGGTGTTGT+TGG | - | chr1_4:16081266-16081285 | None:intergenic | 65.0% |
| GAAATGGAGGGGGGCCGATG+GGG | + | chr1_4:16081929-16081948 | Msa0153000:intron | 65.0% | |
| AGAGGCCATGTGCACTGCGG+TGG | + | chr1_4:16083800-16083819 | Msa0153000:intron | 65.0% | |
| GGGGGATGTGGTGTTCGAGG+TGG | - | chr1_4:16088288-16088307 | None:intergenic | 65.0% | |
| ! | GGAGTTTGGGGCACACGCGC+CGG | - | chr1_4:16081223-16081242 | None:intergenic | 70.0% |
| ACCTCGCCGTCGTCGGTGAC+AGG | + | chr1_4:16081271-16081290 | Msa0153000:CDS | 70.0% | |
| ACCGCGCCTGTCACCGACGA+CGG | - | chr1_4:16081280-16081299 | None:intergenic | 70.0% | |
| GACAGGCGCGGTGGTGAACG+CGG | + | chr1_4:16081288-16081307 | Msa0153000:CDS | 70.0% | |
| GACGCCGTAAAGGCCGGCGA+GGG | - | chr1_4:16081398-16081417 | None:intergenic | 70.0% | |
| ! | GTTTGGGGCACACGCGCCGG+TGG | - | chr1_4:16081220-16081239 | None:intergenic | 75.0% |
| GCCTGTCACCGACGACGGCG+AGG | - | chr1_4:16081275-16081294 | None:intergenic | 75.0% | |
| GCCGTCGTCGGTGACAGGCG+CGG | + | chr1_4:16081276-16081295 | Msa0153000:CDS | 75.0% | |
| GTCGTCGGTGACAGGCGCGG+TGG | + | chr1_4:16081279-16081298 | Msa0153000:CDS | 75.0% | |
| AGGCGCGGTGGTGAACGCGG+TGG | + | chr1_4:16081291-16081310 | Msa0153000:CDS | 75.0% | |
| CGACGCCGTAAAGGCCGGCG+AGG | - | chr1_4:16081399-16081418 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 16081095 | 16088704 | 16081095 | ID=Msa0153000;Name=Msa0153000 |
| chr1_4 | mRNA | 16081095 | 16088704 | 16081095 | ID=Msa0153000-mRNA-1;Parent=Msa0153000;Name=Msa0153000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=164|1|1|1|1|1|11|179|297 |
| chr1_4 | exon | 16081095 | 16081435 | 16081095 | ID=Msa0153000-mRNA-1:exon:6162;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16081575 | 16081665 | 16081575 | ID=Msa0153000-mRNA-1:exon:6163;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16081787 | 16081839 | 16081787 | ID=Msa0153000-mRNA-1:exon:6164;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16082863 | 16082955 | 16082863 | ID=Msa0153000-mRNA-1:exon:6165;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16083072 | 16083143 | 16083072 | ID=Msa0153000-mRNA-1:exon:6166;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16085757 | 16085829 | 16085757 | ID=Msa0153000-mRNA-1:exon:6167;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16085928 | 16085973 | 16085928 | ID=Msa0153000-mRNA-1:exon:6168;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16086488 | 16086551 | 16086488 | ID=Msa0153000-mRNA-1:exon:6169;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16087936 | 16087989 | 16087936 | ID=Msa0153000-mRNA-1:exon:6170;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16088073 | 16088150 | 16088073 | ID=Msa0153000-mRNA-1:exon:6171;Parent=Msa0153000-mRNA-1 |
| chr1_4 | exon | 16088433 | 16088704 | 16088433 | ID=Msa0153000-mRNA-1:exon:6172;Parent=Msa0153000-mRNA-1 |
| chr1_4 | five_prime_UTR | 16081095 | 16081258 | 16081095 | ID=Msa0153000-mRNA-1:five_prime_utr;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16081259 | 16081435 | 16081259 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16081575 | 16081665 | 16081575 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16081787 | 16081839 | 16081787 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16082863 | 16082955 | 16082863 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16083072 | 16083143 | 16083072 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16085757 | 16085829 | 16085757 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16085928 | 16085973 | 16085928 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16086488 | 16086551 | 16086488 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16087936 | 16087989 | 16087936 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16088073 | 16088150 | 16088073 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | CDS | 16088433 | 16088525 | 16088433 | ID=Msa0153000-mRNA-1:cds;Parent=Msa0153000-mRNA-1 |
| chr1_4 | three_prime_UTR | 16088526 | 16088704 | 16088526 | ID=Msa0153000-mRNA-1:three_prime_utr;Parent=Msa0153000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
