AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1153060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1153060 MtrunA17_Chr7g0243441 97.733 838 16 1 1 835 1 838 0.0 1673
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1153060 AT1G79150.1 55.825 824 327 13 1 810 1 801 0.0 868

Find 196 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCGGCGGAAGAACGATTT+TGG 0.164119 7_4:-39213979 None:intergenic
TCTTTGCTTGGACCATTTAC+TGG 0.183655 7_4:-39215248 None:intergenic
CCTGATTGACCTTGATTTCC+TGG 0.201655 7_4:+39219358 Msa1153060:CDS
AAATTTAAAGACAAGAAATT+TGG 0.239380 7_4:+39217841 Msa1153060:CDS
AGCTAGTAAAGGAGAGGATT+TGG 0.248449 7_4:-39221683 None:intergenic
TCAGATACAGTCAGACATTT+AGG 0.262035 7_4:-39219443 None:intergenic
ATCCTTCAGAAATTTAATAT+TGG 0.266075 7_4:-39215721 None:intergenic
TATTAAATTTCTGAAGGATT+TGG 0.293005 7_4:+39215725 Msa1153060:CDS
TCACCTTATGGCCTCATTAC+TGG 0.303949 7_4:-39216475 None:intergenic
GGTGATTGATTTAGTGTCTA+AGG 0.305402 7_4:-39214096 None:intergenic
CGCTGCATTTATAAAACGTT+TGG 0.305579 7_4:+39220272 Msa1153060:CDS
TGCCCTTGCTTCAGTACTTT+GGG 0.310461 7_4:+39221564 Msa1153060:CDS
CTCTCCTTTACTAGCTTTCA+AGG 0.311272 7_4:+39221690 Msa1153060:CDS
ACACAAAACCTACTATATTA+AGG 0.314238 7_4:-39222275 None:intergenic
CTCTGTTTCTGGCACAATTC+CGG 0.317238 7_4:+39220540 Msa1153060:CDS
GCAAGGGCACCGCTTAAATT+AGG 0.322868 7_4:-39221550 None:intergenic
AGATTTATCTCCACTGGAAA+TGG 0.333650 7_4:-39222106 None:intergenic
ATAATAGACTTCTCCATCTA+AGG 0.339424 7_4:-39215097 None:intergenic
TTCCTTTAGCCTGGATGTTA+TGG 0.340824 7_4:+39218064 Msa1153060:CDS
TTTGTTCAAAACTTAGTTCC+TGG 0.341345 7_4:-39221726 None:intergenic
AACAGAAGAAACAGGTTTGC+AGG 0.348092 7_4:+39215044 Msa1153060:CDS
TATCATACCTCAATGGAATC+AGG 0.348420 7_4:-39217475 None:intergenic
AAATTAGGATCAGTTGAATA+TGG 0.350567 7_4:-39221535 None:intergenic
TCTCCAGTTTCCTCTTTGCT+TGG 0.351439 7_4:-39215260 None:intergenic
AGTGCCCCAGGGTTTGCTTC+AGG 0.354543 7_4:-39219263 None:intergenic
AGCACCACAGTCTACAGTTT+TGG 0.359811 7_4:+39215406 Msa1153060:CDS
TAAAACACACCTGACAACTA+TGG 0.370900 7_4:-39218165 None:intergenic
TGTCAAGTGCAGAAATCTAT+TGG 0.376601 7_4:+39220498 Msa1153060:CDS
GGAACTGATACAATCAATAC+TGG 0.381793 7_4:-39222085 None:intergenic
CAATGTCCAGCTATCGAATC+AGG 0.382532 7_4:+39215956 Msa1153060:intron
GTGCCCTTGCTTCAGTACTT+TGG 0.384893 7_4:+39221563 Msa1153060:CDS
CTTCCTGTCAAGTCCTTAGA+TGG 0.385142 7_4:+39215084 Msa1153060:CDS
CAACTTTCGTGAAACCTTGT+TGG 0.387488 7_4:+39216428 Msa1153060:CDS
AGGTTTCACGAAAGTTGAAA+TGG 0.393897 7_4:-39216422 None:intergenic
GGAATCTCCGGTGGGAGGTC+CGG 0.394041 7_4:-39213996 None:intergenic
CTCGTACTTGAATACAGGCC+TGG 0.395896 7_4:+39219563 Msa1153060:CDS
AACATTCAAGGCATCAAGAT+TGG 0.398151 7_4:-39219507 None:intergenic
CAATGGAATCAGGGTGCAAC+TGG 0.400559 7_4:-39217465 None:intergenic
AGAAATTTAATATTGGACTC+TGG 0.407619 7_4:-39215714 None:intergenic
GTAAATGATCGACCATTGTT+TGG 0.412196 7_4:+39221998 Msa1153060:exon
GAAATTTAATATTGGACTCT+GGG 0.413237 7_4:-39215713 None:intergenic
CAAGGCTGCTTCCTTTAGCC+TGG 0.420576 7_4:+39218055 Msa1153060:CDS
GTTCAGTGCTCATGCTTGAA+AGG 0.426198 7_4:-39221642 None:intergenic
CTGATTGACCTTGATTTCCT+GGG 0.428434 7_4:+39219359 Msa1153060:CDS
TATGGTTCTTCATGATATCA+AGG 0.428602 7_4:+39221879 Msa1153060:CDS
GGGGAAGAAACAAGGGAAAG+AGG 0.430594 7_4:+39215361 Msa1153060:CDS
GGTCCAAGCAAAGAGGAAAC+TGG 0.432075 7_4:+39215257 Msa1153060:CDS
CTTGTCTCTTTCATTTGATG+AGG 0.433392 7_4:+39217783 Msa1153060:CDS
CGAAAGGTTGAGAAGTAAGA+TGG 0.434234 7_4:+39221906 Msa1153060:CDS
GGTTTCACGAAAGTTGAAAT+GGG 0.434629 7_4:-39216421 None:intergenic
GTCAGGCCTGAAGCAAACCC+TGG 0.435526 7_4:+39219257 Msa1153060:intron
ACTTGGACTTCTATCCCTCT+TGG 0.436086 7_4:+39215785 Msa1153060:CDS
ACAATCTCGTACTTGAATAC+AGG 0.439384 7_4:+39219558 Msa1153060:CDS
CTTGCCCATCGTTGAATCAA+AGG 0.441850 7_4:-39213940 None:intergenic
GGGGCACTTTCTGCTGCAGT+TGG 0.444294 7_4:+39219278 Msa1153060:CDS
CTTAAGAAAATTAGAAAAGA+GGG 0.447150 7_4:+39215341 Msa1153060:CDS
CCAGGAAATCAAGGTCAATC+AGG 0.448333 7_4:-39219358 None:intergenic
AGGATTTGGAGAGGAAGACT+TGG 0.451776 7_4:-39221669 None:intergenic
AAGAAAGAAACAGAAGAAAC+AGG 0.451933 7_4:+39215036 Msa1153060:CDS
TGCCTTGAATGTTGATCTAC+AGG 0.453178 7_4:+39219517 Msa1153060:CDS
AAGTGTAAACTTGCAGAGTT+GGG 0.459973 7_4:+39215672 Msa1153060:CDS
TAAGTCACTCTTTACAAATG+AGG 0.461486 7_4:+39217372 Msa1153060:CDS
CAGAGATCAAGGAGAGGTGC+TGG 0.466813 7_4:+39220194 Msa1153060:intron
CGACCATTGTTTGGTGATGT+AGG 0.470048 7_4:+39222007 Msa1153060:three_prime_UTR
TGGTTGAGATTTATCTCCAC+TGG 0.470758 7_4:-39222112 None:intergenic
TTGCCCATCGTTGAATCAAA+GGG 0.472242 7_4:-39213939 None:intergenic
GCTACATTGTCACTGTCTGT+TGG 0.472467 7_4:+39220294 Msa1153060:CDS
AGAAAAGAGGGGAAGAAACA+AGG 0.473577 7_4:+39215353 Msa1153060:CDS
GAAGTGTAAACTTGCAGAGT+TGG 0.474407 7_4:+39215671 Msa1153060:CDS
CTCCATAACATCCAGGCTAA+AGG 0.475833 7_4:-39218066 None:intergenic
TAGATGGAGAAGTCTATTAT+CGG 0.477168 7_4:+39215100 Msa1153060:CDS
GTCGCCATCGTTGATATAGC+TGG 0.481654 7_4:-39221616 None:intergenic
CATTTGAAAATACTTGCTGC+TGG 0.484809 7_4:+39219395 Msa1153060:CDS
CCTTGTTGGACGCGACTGTC+AGG 0.485009 7_4:+39216442 Msa1153060:CDS
AGAGGTGGCTAAAGAAGAAG+TGG 0.485345 7_4:+39215379 Msa1153060:CDS
TGTTGGATCTGCAGATTCCA+TGG 0.488522 7_4:+39220311 Msa1153060:CDS
CGATGCAGTCCATAGTTGTC+AGG 0.489215 7_4:+39218156 Msa1153060:CDS
GGAATATTCGACTTCATCGT+CGG 0.490161 7_4:-39214018 None:intergenic
CAAGTACGAGATTGTAAAGA+TGG 0.492958 7_4:-39219550 None:intergenic
TATAGCTGGATGATAGTGTT+TGG 0.493942 7_4:-39221602 None:intergenic
TACAACACCCAACTCACAAA+AGG 0.495487 7_4:-39222227 None:intergenic
ACTGCAGCAGAAAGTGCCCC+AGG 0.495917 7_4:-39219275 None:intergenic
TGCACTTGACATTCTTGAGA+AGG 0.497396 7_4:-39220486 None:intergenic
AATCAGGCTTCCTACTGAAA+AGG 0.498838 7_4:+39215972 Msa1153060:CDS
CAAGGACATGTCTATTGACC+AGG 0.501691 7_4:+39221708 Msa1153060:CDS
TGTAAAGAGTGACTTAATTG+TGG 0.505650 7_4:-39217365 None:intergenic
GATCTCACCATTGTTAAACT+TGG 0.506724 7_4:+39215768 Msa1153060:CDS
TCGTACTTGAATACAGGCCT+GGG 0.508085 7_4:+39219564 Msa1153060:CDS
TGAAAAGGAACAAGAAATGA+AGG 0.508555 7_4:+39215987 Msa1153060:CDS
ACTTAAGAAAATTAGAAAAG+AGG 0.513083 7_4:+39215340 Msa1153060:CDS
ACTTTCTGCTGCAGTTGGAA+TGG 0.514173 7_4:+39219283 Msa1153060:CDS
AAGTCACTCTTTACAAATGA+GGG 0.514376 7_4:+39217373 Msa1153060:CDS
GCTCCAGTAATGAGGCCATA+AGG 0.516391 7_4:+39216472 Msa1153060:CDS
GCTATATCAACGATGGCGAC+AGG 0.516476 7_4:+39221619 Msa1153060:CDS
AAACCCTTTGATTCAACGAT+GGG 0.517046 7_4:+39213936 Msa1153060:exon
ACTTCATCGTCGGGAATCTC+CGG 0.517078 7_4:-39214008 None:intergenic
GTCCAATATTAAATTTCTGA+AGG 0.517646 7_4:+39215719 Msa1153060:CDS
TGATGCTAAAGACGATACTT+TGG 0.518240 7_4:+39214975 Msa1153060:CDS
GAAAAGAGGGGAAGAAACAA+GGG 0.519124 7_4:+39215354 Msa1153060:CDS
AGTGTCTAAGGAAGAAATCA+AGG 0.520627 7_4:-39214084 None:intergenic
GCCCAAAATCGTTCTTCCGC+CGG 0.521501 7_4:+39213977 Msa1153060:CDS
TCTCCATCTAAGGACTTGAC+AGG 0.522445 7_4:-39215087 None:intergenic
GGTACAGCTATCTAAAGATA+AGG 0.526417 7_4:+39215746 Msa1153060:CDS
GTCCTGTAGATCAACATTCA+AGG 0.527209 7_4:-39219519 None:intergenic
AACTCTCCTCTCTGCATACA+AGG 0.527866 7_4:+39216047 Msa1153060:CDS
TTAGATCACCCAGGAAATCA+AGG 0.530257 7_4:-39219367 None:intergenic
AAAATGATGGCAAACATGAC+TGG 0.531392 7_4:-39222132 None:intergenic
GGAGAAGTCTATTATCGGAC+AGG 0.532706 7_4:+39215105 Msa1153060:CDS
GTCTCTTCTCCATAACATCC+AGG 0.533894 7_4:-39218073 None:intergenic
ATCTCTGAAAACAGCCAAGA+GGG 0.534575 7_4:-39215799 None:intergenic
GACGAATTTGACATCGTCGT+CGG 0.534755 7_4:-39214039 None:intergenic
TCAGGCCTGAAGCAAACCCT+GGG 0.535947 7_4:+39219258 Msa1153060:intron
GAATATTCGACTTCATCGTC+GGG 0.536473 7_4:-39214017 None:intergenic
GGATCTGCAGATTCCATGGC+TGG 0.536506 7_4:+39220315 Msa1153060:CDS
TCTTGCGAGGTCTGAACAGA+TGG 0.540752 7_4:+39217807 Msa1153060:CDS
TTCAGACATGGATCAAGCAA+TGG 0.541177 7_4:-39219314 None:intergenic
TCAGACATGGATCAAGCAAT+GGG 0.542395 7_4:-39219313 None:intergenic
GGACTCTGGGTCTGTTAGCA+AGG 0.549508 7_4:-39215700 None:intergenic
AATCTATTGGAAAATGACAC+TGG 0.549657 7_4:+39220511 Msa1153060:CDS
AAAATGACAGAAAGAAAAGC+AGG 0.551759 7_4:+39217905 Msa1153060:CDS
TAGGCAGCATGACATGCAAA+AGG 0.553177 7_4:+39220248 Msa1153060:CDS
ACATGGATCAAGCAATGGGT+GGG 0.554678 7_4:-39219309 None:intergenic
GAGGTCTGAACAGATGGAAA+AGG 0.557653 7_4:+39217813 Msa1153060:CDS
TTATTTATATAGAGAAAATG+AGG 0.558419 7_4:-39222319 None:intergenic
TAAAAGCAACGATGCAACAT+TGG 0.562126 7_4:-39219472 None:intergenic
TCATCGTCGGGAATCTCCGG+TGG 0.565791 7_4:-39214005 None:intergenic
AAGCAACGATGCAACATTGG+AGG 0.566366 7_4:-39219469 None:intergenic
GGACTTGTATCATACCTCAA+TGG 0.567565 7_4:-39217482 None:intergenic
AATGCTACATCAGATTCCAT+TGG 0.568259 7_4:+39221793 Msa1153060:CDS
TGATCCATGTCTGAAGGGAC+TGG 0.569504 7_4:+39219322 Msa1153060:CDS
TATTGGAAAATGACACTGGA+GGG 0.570804 7_4:+39220515 Msa1153060:CDS
TTTGCCAGTCCCTTCAGACA+TGG 0.571273 7_4:-39219326 None:intergenic
ACTGCAACAAGCTGAAATGA+AGG 0.571899 7_4:-39216366 None:intergenic
TTCCCAAAGTACTGAAGCAA+GGG 0.574195 7_4:-39221566 None:intergenic
TTGGAAAATGACACTGGAGG+GGG 0.575675 7_4:+39220517 Msa1153060:CDS
ATATTAAAACATACCAGCCA+TGG 0.576274 7_4:-39220328 None:intergenic
TGTATCAGTTCCATTTCCAG+TGG 0.576660 7_4:+39222096 Msa1153060:three_prime_UTR
GTATCCTAAGGCATGTTACA+CGG 0.576755 7_4:+39214947 Msa1153060:intron
CGTTACTGTAGTGGAACCAA+TGG 0.577345 7_4:-39221809 None:intergenic
GTAAAGGAGAGGATTTGGAG+AGG 0.577373 7_4:-39221678 None:intergenic
GAACATAAGCTCCAGTAATG+AGG 0.577735 7_4:+39216464 Msa1153060:CDS
TTGCTTGATCCATGTCTGAA+GGG 0.579716 7_4:+39219317 Msa1153060:CDS
TATCCTAAGGCATGTTACAC+GGG 0.580959 7_4:+39214948 Msa1153060:intron
TCAACTGATCCTAATTTAAG+CGG 0.581329 7_4:+39221541 Msa1153060:CDS
GACATGGATCAAGCAATGGG+TGG 0.583349 7_4:-39219310 None:intergenic
GAATGAACTCGTTACTGTAG+TGG 0.584409 7_4:-39221818 None:intergenic
ATGTCCTTGAAAGCTAGTAA+AGG 0.584546 7_4:-39221694 None:intergenic
ATTGCTTGATCCATGTCTGA+AGG 0.589017 7_4:+39219316 Msa1153060:CDS
ACATGGTGGCGAAGCTACTG+TGG 0.591883 7_4:+39217399 Msa1153060:CDS
ATCATACCTCAATGGAATCA+GGG 0.594474 7_4:-39217474 None:intergenic
CATGGATCAAGCAATGGGTG+GGG 0.594556 7_4:-39219308 None:intergenic
GAGATGCTTTACTGTGACCA+AGG 0.594849 7_4:-39220464 None:intergenic
GTTGCACCCTGATTCCATTG+AGG 0.596771 7_4:+39217468 Msa1153060:CDS
TTAAGAAAATTAGAAAAGAG+GGG 0.597483 7_4:+39215342 Msa1153060:CDS
TCTTCCGCCGGACCTCCCAC+CGG 0.597963 7_4:+39213989 Msa1153060:CDS
GTCATCAGGCTTACTTGCAA+AGG 0.600005 7_4:+39216322 Msa1153060:intron
ACATTCTGCAGCCACGCGGA+CGG 0.605673 7_4:+39215223 Msa1153060:intron
AAAACCCTTTGATTCAACGA+TGG 0.608969 7_4:+39213935 Msa1153060:exon
CCTGACAGTCGCGTCCAACA+AGG 0.609536 7_4:-39216442 None:intergenic
CGTCGGGAATCTCCGGTGGG+AGG 0.613865 7_4:-39214001 None:intergenic
ATGATATCAAGGAGAACGAA+AGG 0.614882 7_4:+39221890 Msa1153060:CDS
GTTTCACGAAAGTTGAAATG+GGG 0.615913 7_4:-39216420 None:intergenic
TAGAAGTCCAAGTTTAACAA+TGG 0.616701 7_4:-39215775 None:intergenic
GTAGGTTGAAGCTGATTACA+AGG 0.620124 7_4:+39218037 Msa1153060:intron
ATTGGAAAATGACACTGGAG+GGG 0.620286 7_4:+39220516 Msa1153060:CDS
GTTCCCAAAGTACTGAAGCA+AGG 0.625659 7_4:-39221567 None:intergenic
CTTGAAAGCTAGTAAAGGAG+AGG 0.628043 7_4:-39221689 None:intergenic
GTCGATTTCGAAGACAAGAG+AGG 0.634635 7_4:+39217933 Msa1153060:CDS
TTTACAAATGAGGGTAAACA+TGG 0.634841 7_4:+39217382 Msa1153060:CDS
CATTTGATGAGGATCTTGCG+AGG 0.635745 7_4:+39217794 Msa1153060:CDS
AGTAAATGGTCCAAGCAAAG+AGG 0.639853 7_4:+39215250 Msa1153060:CDS
TTGAAAATACTTGCTGCTGG+AGG 0.643680 7_4:+39219398 Msa1153060:CDS
GTATCAAATTAAACAACAAG+AGG 0.644421 7_4:+39221755 Msa1153060:CDS
CATCGTCGGGAATCTCCGGT+GGG 0.646575 7_4:-39214004 None:intergenic
CTATTGGAAAATGACACTGG+AGG 0.647800 7_4:+39220514 Msa1153060:CDS
AACAAGAGGAAACGATCACA+TGG 0.651184 7_4:+39221769 Msa1153060:CDS
CTGCAGCAGAAAGTGCCCCA+GGG 0.653084 7_4:-39219274 None:intergenic
GAGGATGACAATGAAGACAA+AGG 0.653959 7_4:+39215281 Msa1153060:CDS
TACTTGAATACAGGCCTGGG+AGG 0.657851 7_4:+39219567 Msa1153060:CDS
AGATAATGTTGTGTGACGAT+AGG 0.661685 7_4:+39220229 Msa1153060:CDS
AATGGTTCATTAGATCACCC+AGG 0.667630 7_4:-39219376 None:intergenic
TATCTCTGAAAACAGCCAAG+AGG 0.668166 7_4:-39215800 None:intergenic
AAGCTACTGTGGAGGCTGTG+CGG 0.674455 7_4:+39217410 Msa1153060:CDS
AAGCAAAGAGGAAACTGGAG+AGG 0.676821 7_4:+39215262 Msa1153060:CDS
AAGCCTACATCACCAAACAA+TGG 0.681551 7_4:-39222010 None:intergenic
TCATCCAGCTATATCAACGA+TGG 0.682549 7_4:+39221612 Msa1153060:CDS
GATTTCGAAGACAAGAGAGG+AGG 0.684368 7_4:+39217936 Msa1153060:CDS
GAAGAAACAAGGGAAAGAGG+TGG 0.687908 7_4:+39215364 Msa1153060:CDS
ACAAATGAGGGTAAACATGG+TGG 0.697493 7_4:+39217385 Msa1153060:CDS
TATACCAAAACTGTAGACTG+TGG 0.701077 7_4:-39215410 None:intergenic
TATGAACCTTGTATGCAGAG+AGG 0.709150 7_4:-39216053 None:intergenic
TGGTGGCGAAGCTACTGTGG+AGG 0.710292 7_4:+39217402 Msa1153060:CDS
ATGGAACAGAGATCAAGGAG+AGG 0.717938 7_4:+39220188 Msa1153060:intron
CAGGCCTGAAGCAAACCCTG+GGG 0.724330 7_4:+39219259 Msa1153060:intron
TCTCACATTCTGCAGCCACG+CGG 0.741683 7_4:+39215219 Msa1153060:intron
AGTAACGAGTTCATTCAACG+AGG 0.830544 7_4:+39221825 Msa1153060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAATAAATAAAAAAA+TGG + chr7_4:39218325-39218344 Msa1153060:intron 0.0%
!! ATAATTTAATTAGCAAAATA+AGG - chr7_4:39219967-39219986 None:intergenic 10.0%
!!! TAATTTATGTATCATTTTTA+TGG + chr7_4:39220169-39220188 Msa1153060:intron 10.0%
!!! TTTTTTTTGTTTACATTAAA+AGG + chr7_4:39220585-39220604 Msa1153060:intron 10.0%
!!! AAAAAAAACTGTTTTTGATA+AGG + chr7_4:39214225-39214244 Msa1153060:intron 15.0%
!!! TTTCTATTGATTATGATTTA+TGG + chr7_4:39214341-39214360 Msa1153060:intron 15.0%
!!! TTCTATTGATTATGATTTAT+GGG + chr7_4:39214342-39214361 Msa1153060:intron 15.0%
!!! TTTTCTAATTTTCTTAAGTT+TGG - chr7_4:39215339-39215358 None:intergenic 15.0%
!! ACATTGAAAGAAAAAAAAAA+AGG - chr7_4:39217519-39217538 None:intergenic 15.0%
!! AAATTTAAAGACAAGAAATT+TGG + chr7_4:39217841-39217860 Msa1153060:CDS 15.0%
!! CATCAATTATCTTATTATAT+GGG - chr7_4:39218258-39218277 None:intergenic 15.0%
!! GCAAAAAAAAAAAACAAAAT+TGG - chr7_4:39218876-39218895 None:intergenic 15.0%
!!! GTTTAACTTTTAATAAGTTT+TGG + chr7_4:39219181-39219200 Msa1153060:intron 15.0%
!! TGTAAACAAAAAAAAAATCA+TGG - chr7_4:39220580-39220599 None:intergenic 15.0%
!! TTTCAAGCATAAATTAAATA+GGG - chr7_4:39220650-39220669 None:intergenic 15.0%
!! ATTTCAAGCATAAATTAAAT+AGG - chr7_4:39220651-39220670 None:intergenic 15.0%
!! TTAAGTAGATATTGAAAAAT+AGG + chr7_4:39220671-39220690 Msa1153060:intron 15.0%
!! AGTCATAATAAAAAGAAATA+AGG + chr7_4:39220739-39220758 Msa1153060:intron 15.0%
!! GATTATTAATATTTATGTTC+TGG + chr7_4:39221110-39221129 Msa1153060:intron 15.0%
!! CATAATAAAATAATAACTTC+AGG - chr7_4:39221335-39221354 None:intergenic 15.0%
!!! TTTGATTATATGATTTTTAG+TGG + chr7_4:39221433-39221452 Msa1153060:intron 15.0%
!!! TTGATTATATGATTTTTAGT+GGG + chr7_4:39221434-39221453 Msa1153060:intron 15.0%
!!! AATTTTTTCCTTAATATAGT+AGG + chr7_4:39222267-39222286 Msa1153060:three_prime_UTR 15.0%
!!! TTGTGTAAATAATTTGTTTC+CGG + chr7_4:39214177-39214196 Msa1153060:intron 20.0%
!!! TTTTTGATAAGGTTTTTCAA+AGG + chr7_4:39214236-39214255 Msa1153060:intron 20.0%
!!! TTTTGATAAGGTTTTTCAAA+GGG + chr7_4:39214237-39214256 Msa1153060:intron 20.0%
!! ATTTGTAGCATATATGTAAA+TGG + chr7_4:39214633-39214652 Msa1153060:intron 20.0%
!! ACTTATCATATTCTTATAAG+TGG - chr7_4:39214704-39214723 None:intergenic 20.0%
!! TATTAACTATTTATCCAAAC+TGG + chr7_4:39214732-39214751 Msa1153060:intron 20.0%
!! ATTAACTATTTATCCAAACT+GGG + chr7_4:39214733-39214752 Msa1153060:intron 20.0%
!!! ACATTGGATATAATTTTTGT+GGG + chr7_4:39214925-39214944 Msa1153060:intron 20.0%
!! AAGTAAAAGAAAGAAAAGAA+TGG - chr7_4:39215176-39215195 None:intergenic 20.0%
!! ACTTAAGAAAATTAGAAAAG+AGG + chr7_4:39215340-39215359 Msa1153060:CDS 20.0%
!! CTTAAGAAAATTAGAAAAGA+GGG + chr7_4:39215341-39215360 Msa1153060:CDS 20.0%
!! TTAAGAAAATTAGAAAAGAG+GGG + chr7_4:39215342-39215361 Msa1153060:CDS 20.0%
!! ATCCTTCAGAAATTTAATAT+TGG - chr7_4:39215724-39215743 None:intergenic 20.0%
!!! TATTAAATTTCTGAAGGATT+TGG + chr7_4:39215725-39215744 Msa1153060:CDS 20.0%
!! ATTATATTATAGTCTGCATT+TGG + chr7_4:39215882-39215901 Msa1153060:intron 20.0%
!!! TGTAATTTTTTTCACCAATT+CGG - chr7_4:39216212-39216231 None:intergenic 20.0%
!! TGATGTAATATCTTTACTAT+TGG + chr7_4:39216495-39216514 Msa1153060:intron 20.0%
!!! GTTTCATAAACTCAAATTTT+AGG + chr7_4:39216581-39216600 Msa1153060:intron 20.0%
!! TGAAAGAAAAAAAAAAAGGA+TGG - chr7_4:39217515-39217534 None:intergenic 20.0%
!! TGGTAAGAAAAGAAAAAATA+CGG + chr7_4:39217861-39217880 Msa1153060:CDS 20.0%
!! TACTATATTACTATGAAACA+TGG + chr7_4:39218205-39218224 Msa1153060:intron 20.0%
!! GCATCAATTATCTTATTATA+TGG - chr7_4:39218259-39218278 None:intergenic 20.0%
!! ATAATTGATGCTTTGATATA+TGG + chr7_4:39218268-39218287 Msa1153060:intron 20.0%
!! ATGTAAAGTTAGAAAATCAA+CGG + chr7_4:39218688-39218707 Msa1153060:intron 20.0%
!! AGAGGAAAAAAAAAAATAAG+GGG - chr7_4:39218768-39218787 None:intergenic 20.0%
!! CAGAGGAAAAAAAAAAATAA+GGG - chr7_4:39218769-39218788 None:intergenic 20.0%
!! ATAAGCAAATATAAAATGAC+TGG - chr7_4:39218824-39218843 None:intergenic 20.0%
!!! AGTCATTTTATATTTGCTTA+TGG + chr7_4:39218823-39218842 Msa1153060:intron 20.0%
!! AAAAAAAACAAAATTGGAGA+TGG - chr7_4:39218870-39218889 None:intergenic 20.0%
!!! GTTTTTTTTTTTTGCACTAT+TGG + chr7_4:39218881-39218900 Msa1153060:intron 20.0%
!!! GAAATTTTAGTTATTGTTCT+GGG + chr7_4:39219014-39219033 Msa1153060:intron 20.0%
!! GTTAATCAATTCTATTATCA+TGG + chr7_4:39219208-39219227 Msa1153060:intron 20.0%
!! GAAATAAAAGACTAAAGAAA+CGG - chr7_4:39220127-39220146 None:intergenic 20.0%
!! AAAAGAAATAAGGAAATGAA+TGG + chr7_4:39220749-39220768 Msa1153060:intron 20.0%
!! AAAGAAATAAGGAAATGAAT+GGG + chr7_4:39220750-39220769 Msa1153060:intron 20.0%
!! ATCTACATGAAGTTAAAAAA+GGG + chr7_4:39220913-39220932 Msa1153060:intron 20.0%
!! TTATTCTTGAAAGAAAAACT+GGG + chr7_4:39221382-39221401 Msa1153060:intron 20.0%
!!! GAAATTTAGTTCTCATTTTA+TGG + chr7_4:39221861-39221880 Msa1153060:CDS 20.0%
! TAGAAACGAGAATAGAAAAA+GGG - chr7_4:39214137-39214156 None:intergenic 25.0%
! ATAGAAACGAGAATAGAAAA+AGG - chr7_4:39214138-39214157 None:intergenic 25.0%
!!! TGTGTAAATAATTTGTTTCC+GGG + chr7_4:39214178-39214197 Msa1153060:intron 25.0%
! ATCTATATAGCTTATGACTA+TGG - chr7_4:39214297-39214316 None:intergenic 25.0%
! TAGTCATAAGCTATATAGAT+TGG + chr7_4:39214297-39214316 Msa1153060:intron 25.0%
! TAGCATATATGTAAATGGTT+AGG + chr7_4:39214638-39214657 Msa1153060:intron 25.0%
! ATAGTTCTCAAAATGTTTCA+AGG - chr7_4:39214788-39214807 None:intergenic 25.0%
! GTTATGAATTTAACTGACAT+TGG + chr7_4:39214909-39214928 Msa1153060:intron 25.0%
!! GACATTGGATATAATTTTTG+TGG + chr7_4:39214924-39214943 Msa1153060:intron 25.0%
! TTGTCATCATTTCATTGTTT+AGG + chr7_4:39215602-39215621 Msa1153060:intron 25.0%
! GAAATTTAATATTGGACTCT+GGG - chr7_4:39215716-39215735 None:intergenic 25.0%
! AGAAATTTAATATTGGACTC+TGG - chr7_4:39215717-39215736 None:intergenic 25.0%
! GTCCAATATTAAATTTCTGA+AGG + chr7_4:39215719-39215738 Msa1153060:CDS 25.0%
!! TTTTCAGAGATATTATACCT+GGG + chr7_4:39215811-39215830 Msa1153060:CDS 25.0%
! AAAGATATTACATCACCTTA+TGG - chr7_4:39216490-39216509 None:intergenic 25.0%
! GAGAAACATTAGTATACTAA+TGG - chr7_4:39216521-39216540 None:intergenic 25.0%
!!! GAAAACCATGAGAATTTTTT+TGG - chr7_4:39217226-39217245 None:intergenic 25.0%
! TTATATGAGCAAACAAAAAC+TGG - chr7_4:39217248-39217267 None:intergenic 25.0%
!!! TATTCTTGTTTTTGTTAAGC+AGG + chr7_4:39217329-39217348 Msa1153060:intron 25.0%
!! AACAAAAGATTGAGAAGTAT+AGG - chr7_4:39217554-39217573 None:intergenic 25.0%
!!! AATCTTTTGTTTTTCGATTC+AGG + chr7_4:39217563-39217582 Msa1153060:intron 25.0%
!!! TGAACTCATTTTATTTGATG+TGG + chr7_4:39217694-39217713 Msa1153060:intron 25.0%
!! TCTTTTCAATGCTTATATTC+AGG + chr7_4:39217756-39217775 Msa1153060:intron 25.0%
! TAAGAAAAGAAAAAATACGG+AGG + chr7_4:39217864-39217883 Msa1153060:CDS 25.0%
! TATGAAACATGGATGTTAAT+GGG + chr7_4:39218216-39218235 Msa1153060:intron 25.0%
! AAATACATGCTTGAAGAATA+TGG + chr7_4:39218357-39218376 Msa1153060:intron 25.0%
! TATAGGCATGTATGAATAAT+TGG - chr7_4:39218562-39218581 None:intergenic 25.0%
! TTTACATTTACTCACTTTAG+AGG - chr7_4:39218675-39218694 None:intergenic 25.0%
! AGGAAAAAAAAAAATAAGGG+GGG - chr7_4:39218766-39218785 None:intergenic 25.0%
! GAGGAAAAAAAAAAATAAGG+GGG - chr7_4:39218767-39218786 None:intergenic 25.0%
! CCAGAGGAAAAAAAAAAATA+AGG - chr7_4:39218770-39218789 None:intergenic 25.0%
!!! CCTTATTTTTTTTTTTCCTC+TGG + chr7_4:39218767-39218786 Msa1153060:intron 25.0%
! ATGGAAATAATTCCAACATA+AGG - chr7_4:39218851-39218870 None:intergenic 25.0%
! CGTAGAAGAAAAAAAAAGAT+AGG - chr7_4:39218936-39218955 None:intergenic 25.0%
!!! GGAAATTTTAGTTATTGTTC+TGG + chr7_4:39219013-39219032 Msa1153060:intron 25.0%
! TACTTGAATATGTAACTGAA+AGG + chr7_4:39219038-39219057 Msa1153060:intron 25.0%
!! CTAATTTTCTTTCACTTTCT+TGG + chr7_4:39219235-39219254 Msa1153060:intron 25.0%
! CAACTATATTGACAACATAT+TGG - chr7_4:39219642-39219661 None:intergenic 25.0%
! ATGTTGTCAATATAGTTGTT+CGG + chr7_4:39219644-39219663 Msa1153060:intron 25.0%
! TCAAAATTGTCAATATCGTA+TGG + chr7_4:39219798-39219817 Msa1153060:intron 25.0%
! AAAATAAGGTAAGAAAAGAC+AGG - chr7_4:39219839-39219858 None:intergenic 25.0%
! TCAAAATTGTCAATATCGTA+TGG + chr7_4:39219798-39219817 Msa1153060:intron 25.0%
! AAAATAAGGTAAGAAAAGAC+AGG - chr7_4:39219839-39219858 None:intergenic 25.0%
! CATGGAAAAATAAATGTTAC+CGG - chr7_4:39220562-39220581 None:intergenic 25.0%
! AAATGAAAAAAAAATCCGAG+TGG - chr7_4:39220622-39220641 None:intergenic 25.0%
! TTAGGTATCCTACTAAAAAT+AGG + chr7_4:39220716-39220735 Msa1153060:intron 25.0%
!!! TTATGACTCCTATTTTTAGT+AGG - chr7_4:39220727-39220746 None:intergenic 25.0%
! AAGAAATAAGGAAATGAATG+GGG + chr7_4:39220751-39220770 Msa1153060:intron 25.0%
!! CTCAAAGTGATTTTTACTTA+TGG - chr7_4:39220821-39220840 None:intergenic 25.0%
! CATCTACATGAAGTTAAAAA+AGG + chr7_4:39220912-39220931 Msa1153060:intron 25.0%
! ACAAGATACAATACAACAAA+TGG - chr7_4:39221070-39221089 None:intergenic 25.0%
!!! CATGCTTTTATTGTTTTTCT+AGG + chr7_4:39221146-39221165 Msa1153060:intron 25.0%
! GAGATAAGTTAATTATGACA+AGG + chr7_4:39221252-39221271 Msa1153060:intron 25.0%
! CTTATTCTTGAAAGAAAAAC+TGG + chr7_4:39221381-39221400 Msa1153060:intron 25.0%
! TAAAAGCTGATAGAAAAGAA+TGG - chr7_4:39221462-39221481 None:intergenic 25.0%
!! TTCTTTTCTATCAGCTTTTA+TGG + chr7_4:39221462-39221481 Msa1153060:intron 25.0%
!! GATATTTCTGCATATTTCAA+AGG - chr7_4:39221513-39221532 None:intergenic 25.0%
! AAATTAGGATCAGTTGAATA+TGG - chr7_4:39221538-39221557 None:intergenic 25.0%
! GTATCAAATTAAACAACAAG+AGG + chr7_4:39221755-39221774 Msa1153060:CDS 25.0%
! ACACAAAACCTACTATATTA+AGG - chr7_4:39222278-39222297 None:intergenic 25.0%
!! ATCAAAGGGTTTTGTGATTA+GGG - chr7_4:39213928-39213947 None:intergenic 30.0%
!! AATCAAAGGGTTTTGTGATT+AGG - chr7_4:39213929-39213948 None:intergenic 30.0%
AAAGGGATTAATTTCTCACT+TGG - chr7_4:39214120-39214139 None:intergenic 30.0%
!! ATAAGGTTTTTCAAAGGGTT+TGG + chr7_4:39214242-39214261 Msa1153060:intron 30.0%
TGAGCTAAACTGTTACAATT+TGG - chr7_4:39214865-39214884 None:intergenic 30.0%
! TAATTTTTGTGGGTATCCTA+AGG + chr7_4:39214935-39214954 Msa1153060:intron 30.0%
AAGAAAGAAACAGAAGAAAC+AGG + chr7_4:39215036-39215055 Msa1153060:CDS 30.0%
ATAATAGACTTCTCCATCTA+AGG - chr7_4:39215100-39215119 None:intergenic 30.0%
TAGATGGAGAAGTCTATTAT+CGG + chr7_4:39215100-39215119 Msa1153060:CDS 30.0%
! TCATTTCATTGTTTAGGATG+AGG + chr7_4:39215608-39215627 Msa1153060:intron 30.0%
TAGAAGTCCAAGTTTAACAA+TGG - chr7_4:39215778-39215797 None:intergenic 30.0%
! GTTTTCAGAGATATTATACC+TGG + chr7_4:39215810-39215829 Msa1153060:CDS 30.0%
! ATTTCTTGTTCCTTTTCAGT+AGG - chr7_4:39215985-39216004 None:intergenic 30.0%
TGAAAAGGAACAAGAAATGA+AGG + chr7_4:39215987-39216006 Msa1153060:CDS 30.0%
TAATTTCCTATTGAAGAGCA+TGG + chr7_4:39216552-39216571 Msa1153060:intron 30.0%
TAATATCCATGCTCTTCAAT+AGG - chr7_4:39216561-39216580 None:intergenic 30.0%
AAAGGAAACTACCTTCAATT+TGG + chr7_4:39216624-39216643 Msa1153060:intron 30.0%
AAGGAAACTACCTTCAATTT+GGG + chr7_4:39216625-39216644 Msa1153060:intron 30.0%
!! TTGGGTAATTGACTTTTTGA+TGG + chr7_4:39216664-39216683 Msa1153060:intron 30.0%
AATGAAGACAAATGTGATTG+TGG - chr7_4:39216786-39216805 None:intergenic 30.0%
ACGTTTGCATTCTTTCTAAA+TGG + chr7_4:39216830-39216849 Msa1153060:intron 30.0%
AACTACATTTATGCCATTGA+TGG + chr7_4:39216853-39216872 Msa1153060:intron 30.0%
TAATGTATGCTCTTCAAACT+TGG - chr7_4:39216954-39216973 None:intergenic 30.0%
!! ATATTCACATCCTTTGAGAT+CGG - chr7_4:39216988-39217007 None:intergenic 30.0%
ATTATTGTTGACATTGCACT+AGG + chr7_4:39217006-39217025 Msa1153060:intron 30.0%
! CAAGTCATATCTTATTTCGT+TGG + chr7_4:39217145-39217164 Msa1153060:intron 30.0%
!!! CATGAGAATTTTTTTGGTCT+TGG - chr7_4:39217220-39217239 None:intergenic 30.0%
CAAGACCAAAAAAATTCTCA+TGG + chr7_4:39217218-39217237 Msa1153060:intron 30.0%
TGTAAAGAGTGACTTAATTG+TGG - chr7_4:39217368-39217387 None:intergenic 30.0%
TAAGTCACTCTTTACAAATG+AGG + chr7_4:39217372-39217391 Msa1153060:CDS 30.0%
AAGTCACTCTTTACAAATGA+GGG + chr7_4:39217373-39217392 Msa1153060:CDS 30.0%
TTTACAAATGAGGGTAAACA+TGG + chr7_4:39217382-39217401 Msa1153060:CDS 30.0%
AAAAAAAAGGATGGTAGCAT+AGG - chr7_4:39217506-39217525 None:intergenic 30.0%
!!! CTTTTCTTTCTGTCATTTTC+AGG - chr7_4:39217904-39217923 None:intergenic 30.0%
AAAATGACAGAAAGAAAAGC+AGG + chr7_4:39217905-39217924 Msa1153060:CDS 30.0%
CTATGAAACATGGATGTTAA+TGG + chr7_4:39218215-39218234 Msa1153060:intron 30.0%
TATCTTATTATATGGGCAAC+AGG - chr7_4:39218251-39218270 None:intergenic 30.0%
TTGATGCTTTGATATATGGA+CGG + chr7_4:39218272-39218291 Msa1153060:intron 30.0%
AAGATTCAAGAACATGATAG+GGG - chr7_4:39218392-39218411 None:intergenic 30.0%
CAAGATTCAAGAACATGATA+GGG - chr7_4:39218393-39218412 None:intergenic 30.0%
TCAAGATTCAAGAACATGAT+AGG - chr7_4:39218394-39218413 None:intergenic 30.0%
! TTATGAGTATTGTTCACAAG+TGG - chr7_4:39218525-39218544 None:intergenic 30.0%
TGTATGAATAATTGGTTACG+CGG - chr7_4:39218554-39218573 None:intergenic 30.0%
TACTGGAGTAAACAATCTAT+AGG - chr7_4:39218579-39218598 None:intergenic 30.0%
! TTTTTGTCAGATGATTGTAC+TGG - chr7_4:39218596-39218615 None:intergenic 30.0%
AAAGTTAGAAAATCAACGGT+TGG + chr7_4:39218692-39218711 Msa1153060:intron 30.0%
! TCAGTTTAATGATGATGCTT+TGG + chr7_4:39219085-39219104 Msa1153060:intron 30.0%
ATGCAAATGCAATACATTCT+TGG + chr7_4:39219735-39219754 Msa1153060:intron 30.0%
TGCAAATGCAATACATTCTT+GGG + chr7_4:39219736-39219755 Msa1153060:intron 30.0%
!!! ACCTTATTTTGCTACATTCT+TGG + chr7_4:39219849-39219868 Msa1153060:intron 30.0%
!!! CCTTATTTTGCTACATTCTT+GGG + chr7_4:39219850-39219869 Msa1153060:intron 30.0%
ATAAAAGACTAAAGAAACGG+CGG - chr7_4:39220124-39220143 None:intergenic 30.0%
! TTTTTATGGAACAGAGATCA+AGG + chr7_4:39220183-39220202 Msa1153060:intron 30.0%
! CAAACGTTTTATAAATGCAG+CGG - chr7_4:39220274-39220293 None:intergenic 30.0%
ATATTAAAACATACCAGCCA+TGG - chr7_4:39220331-39220350 None:intergenic 30.0%
TATGTGACCATTTGGAAATT+AGG + chr7_4:39220374-39220393 Msa1153060:intron 30.0%
TTCTACACCTAATTTCCAAA+TGG - chr7_4:39220384-39220403 None:intergenic 30.0%
AATCTATTGGAAAATGACAC+TGG + chr7_4:39220511-39220530 Msa1153060:CDS 30.0%
! TTAAGCTTTTCATTTTCGCA+TGG - chr7_4:39220866-39220885 None:intergenic 30.0%
CTGGTATAACAACAATCAAA+TGG - chr7_4:39220948-39220967 None:intergenic 30.0%
! TTGTTGTTATACCAGTGTAT+TGG + chr7_4:39220953-39220972 Msa1153060:intron 30.0%
TAAAAGTTTAGCCAATACAC+TGG - chr7_4:39220967-39220986 None:intergenic 30.0%
! AACAATAAAAGCATGATTCG+AGG - chr7_4:39221141-39221160 None:intergenic 30.0%
TCTAGGTTGTATAGTAGTAA+AGG + chr7_4:39221163-39221182 Msa1153060:intron 30.0%
AAACAAAGATGTTTCATGCT+CGG - chr7_4:39221231-39221250 None:intergenic 30.0%
TTATGACAAGGAAGAACTTA+AGG + chr7_4:39221264-39221283 Msa1153060:intron 30.0%
TATGACAAGGAAGAACTTAA+GGG + chr7_4:39221265-39221284 Msa1153060:intron 30.0%
TCAACTGATCCTAATTTAAG+CGG + chr7_4:39221541-39221560 Msa1153060:CDS 30.0%
TTTGTTCAAAACTTAGTTCC+TGG - chr7_4:39221729-39221748 None:intergenic 30.0%
!!! GAACTAAGTTTTGAACAAAG+TGG + chr7_4:39221730-39221749 Msa1153060:CDS 30.0%
TATGGTTCTTCATGATATCA+AGG + chr7_4:39221879-39221898 Msa1153060:CDS 30.0%
! ATATAGCTGAAGTGATTTTG+CGG - chr7_4:39221938-39221957 None:intergenic 30.0%
!! ATTTTAGTGCAGGAAAACAA+TGG + chr7_4:39222150-39222169 Msa1153060:three_prime_UTR 30.0%
AAATAACACCCAAAAAGTTG+AGG + chr7_4:39222200-39222219 Msa1153060:three_prime_UTR 30.0%
AAAACCCTTTGATTCAACGA+TGG + chr7_4:39213935-39213954 Msa1153060:exon 35.0%
AAACCCTTTGATTCAACGAT+GGG + chr7_4:39213936-39213955 Msa1153060:exon 35.0%
AGTGTCTAAGGAAGAAATCA+AGG - chr7_4:39214087-39214106 None:intergenic 35.0%
! GGTGATTGATTTAGTGTCTA+AGG - chr7_4:39214099-39214118 None:intergenic 35.0%
!! GTACCCTTTGTTTCTGAAAA+CGG + chr7_4:39214200-39214219 Msa1153060:intron 35.0%
!! TACCCTTTGTTTCTGAAAAC+GGG + chr7_4:39214201-39214220 Msa1153060:intron 35.0%
! TTCCCGTTTTCAGAAACAAA+GGG - chr7_4:39214206-39214225 None:intergenic 35.0%
! TTTCCCGTTTTCAGAAACAA+AGG - chr7_4:39214207-39214226 None:intergenic 35.0%
TTATGATTTATGGGTCTGTG+TGG + chr7_4:39214351-39214370 Msa1153060:intron 35.0%
!! AGCTTGTGAAGGTATTAAGT+TGG + chr7_4:39214586-39214605 Msa1153060:intron 35.0%
TGATGCTAAAGACGATACTT+TGG + chr7_4:39214975-39214994 Msa1153060:CDS 35.0%
!! AGGTTTTGTGAAGCTAACTA+AGG + chr7_4:39215301-39215320 Msa1153060:CDS 35.0%
TATACCAAAACTGTAGACTG+TGG - chr7_4:39215413-39215432 None:intergenic 35.0%
GAGACTTCATATTACATGAG+AGG - chr7_4:39215463-39215482 None:intergenic 35.0%
AAGTGTAAACTTGCAGAGTT+GGG + chr7_4:39215672-39215691 Msa1153060:CDS 35.0%
GGTACAGCTATCTAAAGATA+AGG + chr7_4:39215746-39215765 Msa1153060:CDS 35.0%
GATCTCACCATTGTTAAACT+TGG + chr7_4:39215768-39215787 Msa1153060:CDS 35.0%
TATGACAGTTAATCATACCC+AGG - chr7_4:39215831-39215850 None:intergenic 35.0%
TCTTTAACCTACATCCGAAT+TGG + chr7_4:39216195-39216214 Msa1153060:intron 35.0%
! TTTTTCACCAATTCGGATGT+AGG - chr7_4:39216205-39216224 None:intergenic 35.0%
ACGTGCATAAATAGAAGCAA+AGG - chr7_4:39216304-39216323 None:intergenic 35.0%
TTCTATTTATGCACGTCATC+AGG + chr7_4:39216308-39216327 Msa1153060:intron 35.0%
! AAATGAAGGCAGCTTTTCTA+AGG - chr7_4:39216355-39216374 None:intergenic 35.0%
GTTTCACGAAAGTTGAAATG+GGG - chr7_4:39216423-39216442 None:intergenic 35.0%
GGTTTCACGAAAGTTGAAAT+GGG - chr7_4:39216424-39216443 None:intergenic 35.0%
AGGTTTCACGAAAGTTGAAA+TGG - chr7_4:39216425-39216444 None:intergenic 35.0%
GAAGAATCCATCATTGGAAA+AGG + chr7_4:39216606-39216625 Msa1153060:intron 35.0%
! GTAGTTTCCTTTTCCAATGA+TGG - chr7_4:39216616-39216635 None:intergenic 35.0%
AGGAAACTACCTTCAATTTG+GGG + chr7_4:39216626-39216645 Msa1153060:intron 35.0%
ATCTACACTTGAACTACACA+AGG - chr7_4:39216714-39216733 None:intergenic 35.0%
GTTGTTTATACCTTCCATCT+AGG + chr7_4:39216738-39216757 Msa1153060:intron 35.0%
TACATTTATGCCATTGATGG+AGG + chr7_4:39216856-39216875 Msa1153060:intron 35.0%
CATGTTATTACCTCCATCAA+TGG - chr7_4:39216869-39216888 None:intergenic 35.0%
TTATCTCCATGCAGTTGAAA+TGG + chr7_4:39216902-39216921 Msa1153060:intron 35.0%
TCAACATATAGAAGCCATAC+TGG - chr7_4:39217193-39217212 None:intergenic 35.0%
AGTATGGCTTCTATATGTTG+AGG + chr7_4:39217192-39217211 Msa1153060:intron 35.0%
GTATGGCTTCTATATGTTGA+GGG + chr7_4:39217193-39217212 Msa1153060:intron 35.0%
ATCATACCTCAATGGAATCA+GGG - chr7_4:39217477-39217496 None:intergenic 35.0%
TATCATACCTCAATGGAATC+AGG - chr7_4:39217478-39217497 None:intergenic 35.0%
! ATTGAGAAGTATAGGACTTC+TGG - chr7_4:39217546-39217565 None:intergenic 35.0%
CTTGTCTCTTTCATTTGATG+AGG + chr7_4:39217783-39217802 Msa1153060:CDS 35.0%
CAGAACAGAGTGATTCTTAT+TGG - chr7_4:39217973-39217992 None:intergenic 35.0%
CAATAAGAATCACTCTGTTC+TGG + chr7_4:39217971-39217990 Msa1153060:intron 35.0%
!! ATCACTCTGTTCTGGATTTT+TGG + chr7_4:39217979-39217998 Msa1153060:intron 35.0%
TAAAACACACCTGACAACTA+TGG - chr7_4:39218168-39218187 None:intergenic 35.0%
! GTCGGCATATTGATTGTAAT+TGG - chr7_4:39218426-39218445 None:intergenic 35.0%
CTATCAAGTCAATGCAATGT+CGG - chr7_4:39218444-39218463 None:intergenic 35.0%
GTATGAATAATTGGTTACGC+GGG - chr7_4:39218553-39218572 None:intergenic 35.0%
!!! TTTGATCCCACTTCGTTTTT+TGG + chr7_4:39218641-39218660 Msa1153060:intron 35.0%
CCAAATCCAAAAAACGAAGT+GGG - chr7_4:39218650-39218669 None:intergenic 35.0%
TCCAAATCCAAAAAACGAAG+TGG - chr7_4:39218651-39218670 None:intergenic 35.0%
AAAAGGTTTGGAAGTGGAAA+CGG - chr7_4:39218732-39218751 None:intergenic 35.0%
TTGCTTATGGATCCTTATGT+TGG + chr7_4:39218836-39218855 Msa1153060:intron 35.0%
TTTCTTTCACTTTCTTGGTC+AGG + chr7_4:39219240-39219259 Msa1153060:intron 35.0%
! CAGCAGCAAGTATTTTCAAA+TGG - chr7_4:39219397-39219416 None:intergenic 35.0%
! CATTTGAAAATACTTGCTGC+TGG + chr7_4:39219395-39219414 Msa1153060:CDS 35.0%
TCAGATACAGTCAGACATTT+AGG - chr7_4:39219446-39219465 None:intergenic 35.0%
TAAAAGCAACGATGCAACAT+TGG - chr7_4:39219475-39219494 None:intergenic 35.0%
! AACATTCAAGGCATCAAGAT+TGG - chr7_4:39219510-39219529 None:intergenic 35.0%
CAAGTACGAGATTGTAAAGA+TGG - chr7_4:39219553-39219572 None:intergenic 35.0%
ACAATCTCGTACTTGAATAC+AGG + chr7_4:39219558-39219577 Msa1153060:CDS 35.0%
TGACAACATATTGGTCAGTT+GGG - chr7_4:39219633-39219652 None:intergenic 35.0%
TTGACAACATATTGGTCAGT+TGG - chr7_4:39219634-39219653 None:intergenic 35.0%
CCCAAGAATGTAGCAAAATA+AGG - chr7_4:39219853-39219872 None:intergenic 35.0%
AGATAATGTTGTGTGACGAT+AGG + chr7_4:39220229-39220248 Msa1153060:CDS 35.0%
CGCTGCATTTATAAAACGTT+TGG + chr7_4:39220272-39220291 Msa1153060:CDS 35.0%
ATGGTCACATACAGAGATAA+AGG - chr7_4:39220365-39220384 None:intergenic 35.0%
TATCTCTGTATGTGACCATT+TGG + chr7_4:39220366-39220385 Msa1153060:intron 35.0%
TGTCAAGTGCAGAAATCTAT+TGG + chr7_4:39220498-39220517 Msa1153060:CDS 35.0%
TATTGGAAAATGACACTGGA+GGG + chr7_4:39220515-39220534 Msa1153060:CDS 35.0%
ATGGACATTTACAAGCAACA+AGG - chr7_4:39220802-39220821 None:intergenic 35.0%
TCACATCTTCTGTTGTTGAT+TGG - chr7_4:39221023-39221042 None:intergenic 35.0%
ATGACAAGGAAGAACTTAAG+GGG + chr7_4:39221266-39221285 Msa1153060:intron 35.0%
! ACTGGGTGAACAGAAATTTT+AGG + chr7_4:39221399-39221418 Msa1153060:intron 35.0%
! CTGGGTGAACAGAAATTTTA+GGG + chr7_4:39221400-39221419 Msa1153060:intron 35.0%
!!! TGAACAGAAATTTTAGGGCA+GGG + chr7_4:39221405-39221424 Msa1153060:intron 35.0%
AAAGGTAAGACAGAAAGAGA+TGG - chr7_4:39221495-39221514 None:intergenic 35.0%
! TATAGCTGGATGATAGTGTT+TGG - chr7_4:39221605-39221624 None:intergenic 35.0%
ATGTCCTTGAAAGCTAGTAA+AGG - chr7_4:39221697-39221716 None:intergenic 35.0%
AATGCTACATCAGATTCCAT+TGG + chr7_4:39221793-39221812 Msa1153060:CDS 35.0%
ATGATATCAAGGAGAACGAA+AGG + chr7_4:39221890-39221909 Msa1153060:CDS 35.0%
GTAAATGATCGACCATTGTT+TGG + chr7_4:39221998-39222017 Msa1153060:exon 35.0%
GGAACTGATACAATCAATAC+TGG - chr7_4:39222088-39222107 None:intergenic 35.0%
AGATTTATCTCCACTGGAAA+TGG - chr7_4:39222109-39222128 None:intergenic 35.0%
AAAATGATGGCAAACATGAC+TGG - chr7_4:39222135-39222154 None:intergenic 35.0%
! GTTTTCCTGCACTAAAATGA+TGG - chr7_4:39222148-39222167 None:intergenic 35.0%
TTGCCCATCGTTGAATCAAA+GGG - chr7_4:39213942-39213961 None:intergenic 40.0%
GAATATTCGACTTCATCGTC+GGG - chr7_4:39214020-39214039 None:intergenic 40.0%
GGAATATTCGACTTCATCGT+CGG - chr7_4:39214021-39214040 None:intergenic 40.0%
!! TTTCAGAAACAAAGGGTACC+CGG - chr7_4:39214199-39214218 None:intergenic 40.0%
ATTTATGGGTCTGTGTGGAT+TGG + chr7_4:39214356-39214375 Msa1153060:intron 40.0%
!! AAGCACTTCTGAGACTGATT+AGG + chr7_4:39214404-39214423 Msa1153060:intron 40.0%
GTATCCTAAGGCATGTTACA+CGG + chr7_4:39214947-39214966 Msa1153060:intron 40.0%
TATCCTAAGGCATGTTACAC+GGG + chr7_4:39214948-39214967 Msa1153060:intron 40.0%
AACAGAAGAAACAGGTTTGC+AGG + chr7_4:39215044-39215063 Msa1153060:CDS 40.0%
TCTTTGCTTGGACCATTTAC+TGG - chr7_4:39215251-39215270 None:intergenic 40.0%
AGTAAATGGTCCAAGCAAAG+AGG + chr7_4:39215250-39215269 Msa1153060:CDS 40.0%
GAGGATGACAATGAAGACAA+AGG + chr7_4:39215281-39215300 Msa1153060:CDS 40.0%
AGAAAAGAGGGGAAGAAACA+AGG + chr7_4:39215353-39215372 Msa1153060:CDS 40.0%
GAAAAGAGGGGAAGAAACAA+GGG + chr7_4:39215354-39215373 Msa1153060:CDS 40.0%
! TTGAACTGCTACCTTTTGAG+AGG + chr7_4:39215544-39215563 Msa1153060:intron 40.0%
GAAGTGTAAACTTGCAGAGT+TGG + chr7_4:39215671-39215690 Msa1153060:CDS 40.0%
! ATCTCTGAAAACAGCCAAGA+GGG - chr7_4:39215802-39215821 None:intergenic 40.0%
! TATCTCTGAAAACAGCCAAG+AGG - chr7_4:39215803-39215822 None:intergenic 40.0%
! TGCATTGATGTCAGAGATGA+AGG - chr7_4:39215934-39215953 None:intergenic 40.0%
AATCAGGCTTCCTACTGAAA+AGG + chr7_4:39215972-39215991 Msa1153060:CDS 40.0%
TATGAACCTTGTATGCAGAG+AGG - chr7_4:39216056-39216075 None:intergenic 40.0%
GACAGGAAGTCATATCTAAC+AGG - chr7_4:39216145-39216164 None:intergenic 40.0%
ACTGCAACAAGCTGAAATGA+AGG - chr7_4:39216369-39216388 None:intergenic 40.0%
CAACTTTCGTGAAACCTTGT+TGG + chr7_4:39216428-39216447 Msa1153060:CDS 40.0%
GAACATAAGCTCCAGTAATG+AGG + chr7_4:39216464-39216483 Msa1153060:CDS 40.0%
TAGGCTGAAGAATCCATCAT+TGG + chr7_4:39216600-39216619 Msa1153060:intron 40.0%
! TACCTTCAATTTGGGGCATA+AGG + chr7_4:39216633-39216652 Msa1153060:intron 40.0%
! ACCTTCAATTTGGGGCATAA+GGG + chr7_4:39216634-39216653 Msa1153060:intron 40.0%
! GTATTGACAACCTAGATGGA+AGG - chr7_4:39216751-39216770 None:intergenic 40.0%
AAAAAAGTCGCCGATCTCAA+AGG + chr7_4:39216975-39216994 Msa1153060:intron 40.0%
! GTTTTCGATTGACACAGACA+TGG - chr7_4:39217049-39217068 None:intergenic 40.0%
AAAGCCTGTCGCATTTGTAA+CGG - chr7_4:39217085-39217104 None:intergenic 40.0%
ACAAATGAGGGTAAACATGG+TGG + chr7_4:39217385-39217404 Msa1153060:CDS 40.0%
GGACTTGTATCATACCTCAA+TGG - chr7_4:39217485-39217504 None:intergenic 40.0%
!! ATTCTACCGATGCTTGTTGT+AGG + chr7_4:39218019-39218038 Msa1153060:intron 40.0%
CTTCAACCTACAACAAGCAT+CGG - chr7_4:39218028-39218047 None:intergenic 40.0%
! GTAGGTTGAAGCTGATTACA+AGG + chr7_4:39218037-39218056 Msa1153060:intron 40.0%
TTCCTTTAGCCTGGATGTTA+TGG + chr7_4:39218064-39218083 Msa1153060:CDS 40.0%
GTGAAAGCTACTGGTCAAAA+TGG - chr7_4:39218479-39218498 None:intergenic 40.0%
!!! CCCACTTCGTTTTTTGGATT+TGG + chr7_4:39218647-39218666 Msa1153060:intron 40.0%
GAAAGGAAAAGGTTTGGAAG+TGG - chr7_4:39218738-39218757 None:intergenic 40.0%
GTTGCAGAAAGGAAAAGGTT+TGG - chr7_4:39218744-39218763 None:intergenic 40.0%
! GGTGCAATGAATTTTTCCAG+AGG - chr7_4:39218786-39218805 None:intergenic 40.0%
GACTGGATCTGAGTTTAAGT+GGG - chr7_4:39218807-39218826 None:intergenic 40.0%
TGACTGGATCTGAGTTTAAG+TGG - chr7_4:39218808-39218827 None:intergenic 40.0%
!! TTCATTCTGAAGTTTGTGCG+TGG + chr7_4:39218964-39218983 Msa1153060:intron 40.0%
TGTGAGAAAGATGCAAGCAT+AGG - chr7_4:39219145-39219164 None:intergenic 40.0%
TCAGACATGGATCAAGCAAT+GGG - chr7_4:39219316-39219335 None:intergenic 40.0%
TTCAGACATGGATCAAGCAA+TGG - chr7_4:39219317-39219336 None:intergenic 40.0%
ATTGCTTGATCCATGTCTGA+AGG + chr7_4:39219316-39219335 Msa1153060:CDS 40.0%
TTGCTTGATCCATGTCTGAA+GGG + chr7_4:39219317-39219336 Msa1153060:CDS 40.0%
CTGATTGACCTTGATTTCCT+GGG + chr7_4:39219359-39219378 Msa1153060:CDS 40.0%
TTAGATCACCCAGGAAATCA+AGG - chr7_4:39219370-39219389 None:intergenic 40.0%
AATGGTTCATTAGATCACCC+AGG - chr7_4:39219379-39219398 None:intergenic 40.0%
! TTGAAAATACTTGCTGCTGG+AGG + chr7_4:39219398-39219417 Msa1153060:CDS 40.0%
TGCCTTGAATGTTGATCTAC+AGG + chr7_4:39219517-39219536 Msa1153060:CDS 40.0%
GTCCTGTAGATCAACATTCA+AGG - chr7_4:39219522-39219541 None:intergenic 40.0%
! TTTTAATGCACAAACCTCCC+AGG - chr7_4:39219584-39219603 None:intergenic 40.0%
TTGGGAAAAGCAAGGACTTT+AGG - chr7_4:39219615-39219634 None:intergenic 40.0%
! GTCAATATAGTTGTTCGGTG+CGG + chr7_4:39219649-39219668 Msa1153060:intron 40.0%
TGCACTTGACATTCTTGAGA+AGG - chr7_4:39220489-39220508 None:intergenic 40.0%
CTATTGGAAAATGACACTGG+AGG + chr7_4:39220514-39220533 Msa1153060:CDS 40.0%
ATTGGAAAATGACACTGGAG+GGG + chr7_4:39220516-39220535 Msa1153060:CDS 40.0%
AAGGCACATTCATTTCCACT+CGG + chr7_4:39220604-39220623 Msa1153060:intron 40.0%
! CAACAAGAGTGCAGATGTTT+AGG + chr7_4:39220698-39220717 Msa1153060:intron 40.0%
! GGAATGCTAGCTACATGTTT+TGG - chr7_4:39220781-39220800 None:intergenic 40.0%
CATGGAAAGAGTTACAGCAA+TGG - chr7_4:39220848-39220867 None:intergenic 40.0%
TGTTTCATGCTCGGTATATC+AGG - chr7_4:39221222-39221241 None:intergenic 40.0%
AACTTAAGGGGAGTGGAAAA+GGG + chr7_4:39221278-39221297 Msa1153060:intron 40.0%
!!! GTGAACAGAAATTTTAGGGC+AGG + chr7_4:39221404-39221423 Msa1153060:intron 40.0%
!! TTCCCAAAGTACTGAAGCAA+GGG - chr7_4:39221569-39221588 None:intergenic 40.0%
TCATCCAGCTATATCAACGA+TGG + chr7_4:39221612-39221631 Msa1153060:CDS 40.0%
AGCTAGTAAAGGAGAGGATT+TGG - chr7_4:39221686-39221705 None:intergenic 40.0%
CTTGAAAGCTAGTAAAGGAG+AGG - chr7_4:39221692-39221711 None:intergenic 40.0%
!! CTCTCCTTTACTAGCTTTCA+AGG + chr7_4:39221690-39221709 Msa1153060:CDS 40.0%
AACAAGAGGAAACGATCACA+TGG + chr7_4:39221769-39221788 Msa1153060:CDS 40.0%
GAATGAACTCGTTACTGTAG+TGG - chr7_4:39221821-39221840 None:intergenic 40.0%
AGTAACGAGTTCATTCAACG+AGG + chr7_4:39221825-39221844 Msa1153060:CDS 40.0%
CGAAAGGTTGAGAAGTAAGA+TGG + chr7_4:39221906-39221925 Msa1153060:CDS 40.0%
AAGCCTACATCACCAAACAA+TGG - chr7_4:39222013-39222032 None:intergenic 40.0%
TGTATCAGTTCCATTTCCAG+TGG + chr7_4:39222096-39222115 Msa1153060:three_prime_UTR 40.0%
TGGTTGAGATTTATCTCCAC+TGG - chr7_4:39222115-39222134 None:intergenic 40.0%
!! GTTTGCCATCATTTTAGTGC+AGG + chr7_4:39222140-39222159 Msa1153060:three_prime_UTR 40.0%
! AAGGACAGCCTCAACTTTTT+GGG - chr7_4:39222211-39222230 None:intergenic 40.0%
! AAAGGACAGCCTCAACTTTT+TGG - chr7_4:39222212-39222231 None:intergenic 40.0%
TACAACACCCAACTCACAAA+AGG - chr7_4:39222230-39222249 None:intergenic 40.0%
CTTGCCCATCGTTGAATCAA+AGG - chr7_4:39213943-39213962 None:intergenic 45.0%
GACGAATTTGACATCGTCGT+CGG - chr7_4:39214042-39214061 None:intergenic 45.0%
CTGTTTGACTGAGCTTGTGA+AGG + chr7_4:39214575-39214594 Msa1153060:intron 45.0%
ACATTCAAATGCCAGCTCAG+AGG - chr7_4:39214759-39214778 None:intergenic 45.0%
CTGAGCTGGCATTTGAATGT+TGG + chr7_4:39214759-39214778 Msa1153060:intron 45.0%
AGTGACGAGAAGGACAACAT+CGG - chr7_4:39214821-39214840 None:intergenic 45.0%
ACACTGTACAAGTGACGAGA+AGG - chr7_4:39214831-39214850 None:intergenic 45.0%
TTCTCGTCACTTGTACAGTG+TGG + chr7_4:39214830-39214849 Msa1153060:intron 45.0%
CTTCCTGTCAAGTCCTTAGA+TGG + chr7_4:39215084-39215103 Msa1153060:CDS 45.0%
TCTCCATCTAAGGACTTGAC+AGG - chr7_4:39215090-39215109 None:intergenic 45.0%
GGAGAAGTCTATTATCGGAC+AGG + chr7_4:39215105-39215124 Msa1153060:CDS 45.0%
TCTCCAGTTTCCTCTTTGCT+TGG - chr7_4:39215263-39215282 None:intergenic 45.0%
AAGCAAAGAGGAAACTGGAG+AGG + chr7_4:39215262-39215281 Msa1153060:CDS 45.0%
GAAGAAACAAGGGAAAGAGG+TGG + chr7_4:39215364-39215383 Msa1153060:CDS 45.0%
AGAGGTGGCTAAAGAAGAAG+TGG + chr7_4:39215379-39215398 Msa1153060:CDS 45.0%
! AGCACCACAGTCTACAGTTT+TGG + chr7_4:39215406-39215425 Msa1153060:CDS 45.0%
GACTCAAGAGTCCTCTCAAA+AGG - chr7_4:39215558-39215577 None:intergenic 45.0%
ACTTGGACTTCTATCCCTCT+TGG + chr7_4:39215785-39215804 Msa1153060:CDS 45.0%
CAATGTCCAGCTATCGAATC+AGG + chr7_4:39215956-39215975 Msa1153060:intron 45.0%
AACTCTCCTCTCTGCATACA+AGG + chr7_4:39216047-39216066 Msa1153060:CDS 45.0%
GTCATCAGGCTTACTTGCAA+AGG + chr7_4:39216322-39216341 Msa1153060:intron 45.0%
TCACCTTATGGCCTCATTAC+TGG - chr7_4:39216478-39216497 None:intergenic 45.0%
TCCCTTATGCCCCAAATTGA+AGG - chr7_4:39216638-39216657 None:intergenic 45.0%
GGGCATAAGGGAAATGTCTT+GGG + chr7_4:39216646-39216665 Msa1153060:intron 45.0%
!! CACGGTATTGACAACCTAGA+TGG - chr7_4:39216755-39216774 None:intergenic 45.0%
CATCTAGGTTGTCAATACCG+TGG + chr7_4:39216753-39216772 Msa1153060:intron 45.0%
GTGATTGTGGCACTATTCCA+CGG - chr7_4:39216773-39216792 None:intergenic 45.0%
CCAACACCATTTCAACTGCA+TGG - chr7_4:39216911-39216930 None:intergenic 45.0%
CCATGCAGTTGAAATGGTGT+TGG + chr7_4:39216908-39216927 Msa1153060:intron 45.0%
AAGCCTGTCGCATTTGTAAC+GGG - chr7_4:39217084-39217103 None:intergenic 45.0%
!! TTATTTCGTTGGCTCAGCTC+TGG + chr7_4:39217156-39217175 Msa1153060:intron 45.0%
CATTTGATGAGGATCTTGCG+AGG + chr7_4:39217794-39217813 Msa1153060:CDS 45.0%
GAGGTCTGAACAGATGGAAA+AGG + chr7_4:39217813-39217832 Msa1153060:CDS 45.0%
! GTCGATTTCGAAGACAAGAG+AGG + chr7_4:39217933-39217952 Msa1153060:CDS 45.0%
GATTTCGAAGACAAGAGAGG+AGG + chr7_4:39217936-39217955 Msa1153060:CDS 45.0%
CTCCATAACATCCAGGCTAA+AGG - chr7_4:39218069-39218088 None:intergenic 45.0%
GTCTCTTCTCCATAACATCC+AGG - chr7_4:39218076-39218095 None:intergenic 45.0%
TGCTTTGATATATGGACGGC+TGG + chr7_4:39218276-39218295 Msa1153060:intron 45.0%
CCAAGAACTGTGAAAGCTAC+TGG - chr7_4:39218488-39218507 None:intergenic 45.0%
CCAGTAGCTTTCACAGTTCT+TGG + chr7_4:39218485-39218504 Msa1153060:intron 45.0%
AAATAAGGGGGGTTGCAGAA+AGG - chr7_4:39218755-39218774 None:intergenic 45.0%
ACTTTCTGCTGCAGTTGGAA+TGG + chr7_4:39219283-39219302 Msa1153060:CDS 45.0%
ACATGGATCAAGCAATGGGT+GGG - chr7_4:39219312-39219331 None:intergenic 45.0%
CCAGGAAATCAAGGTCAATC+AGG - chr7_4:39219361-39219380 None:intergenic 45.0%
CCTGATTGACCTTGATTTCC+TGG + chr7_4:39219358-39219377 Msa1153060:CDS 45.0%
AAGCAACGATGCAACATTGG+AGG - chr7_4:39219472-39219491 None:intergenic 45.0%
TCGTACTTGAATACAGGCCT+GGG + chr7_4:39219564-39219583 Msa1153060:CDS 45.0%
TTGGTCAGTTGGGAAAAGCA+AGG - chr7_4:39219623-39219642 None:intergenic 45.0%
ATGGAACAGAGATCAAGGAG+AGG + chr7_4:39220188-39220207 Msa1153060:intron 45.0%
TAGGCAGCATGACATGCAAA+AGG + chr7_4:39220248-39220267 Msa1153060:CDS 45.0%
GCTACATTGTCACTGTCTGT+TGG + chr7_4:39220294-39220313 Msa1153060:CDS 45.0%
TGTTGGATCTGCAGATTCCA+TGG + chr7_4:39220311-39220330 Msa1153060:CDS 45.0%
CAAGGCTGAAACAGGTACAA+AGG - chr7_4:39220449-39220468 None:intergenic 45.0%
CTTTGTACCTGTTTCAGCCT+TGG + chr7_4:39220447-39220466 Msa1153060:intron 45.0%
GAGATGCTTTACTGTGACCA+AGG - chr7_4:39220467-39220486 None:intergenic 45.0%
TTGGAAAATGACACTGGAGG+GGG + chr7_4:39220517-39220536 Msa1153060:CDS 45.0%
!! CTCTGTTTCTGGCACAATTC+CGG + chr7_4:39220540-39220559 Msa1153060:CDS 45.0%
AAGGAAGAACTTAAGGGGAG+TGG + chr7_4:39221271-39221290 Msa1153060:intron 45.0%
GAACTTAAGGGGAGTGGAAA+AGG + chr7_4:39221277-39221296 Msa1153060:intron 45.0%
TGCCCTTGCTTCAGTACTTT+GGG + chr7_4:39221564-39221583 Msa1153060:CDS 45.0%
!! GTTCCCAAAGTACTGAAGCA+AGG - chr7_4:39221570-39221589 None:intergenic 45.0%
GTTCAGTGCTCATGCTTGAA+AGG - chr7_4:39221645-39221664 None:intergenic 45.0%
AGGATTTGGAGAGGAAGACT+TGG - chr7_4:39221672-39221691 None:intergenic 45.0%
GTAAAGGAGAGGATTTGGAG+AGG - chr7_4:39221681-39221700 None:intergenic 45.0%
CAAGGACATGTCTATTGACC+AGG + chr7_4:39221708-39221727 Msa1153060:CDS 45.0%
! CGTTACTGTAGTGGAACCAA+TGG - chr7_4:39221812-39221831 None:intergenic 45.0%
!! CGACCATTGTTTGGTGATGT+AGG + chr7_4:39222007-39222026 Msa1153060:three_prime_UTR 45.0%
! AGGCTGTCCTTTTGTGAGTT+GGG + chr7_4:39222220-39222239 Msa1153060:three_prime_UTR 45.0%
! TCCGGCGGAAGAACGATTTT+GGG - chr7_4:39213981-39214000 None:intergenic 50.0%
ACTTCATCGTCGGGAATCTC+CGG - chr7_4:39214011-39214030 None:intergenic 50.0%
CAACCCGTGTAACATGCCTT+AGG - chr7_4:39214954-39214973 None:intergenic 50.0%
GGTCCAAGCAAAGAGGAAAC+TGG + chr7_4:39215257-39215276 Msa1153060:CDS 50.0%
GGGGAAGAAACAAGGGAAAG+AGG + chr7_4:39215361-39215380 Msa1153060:CDS 50.0%
! AGGAAGCCTGATTCGATAGC+TGG - chr7_4:39215965-39215984 None:intergenic 50.0%
GCTCCAGTAATGAGGCCATA+AGG + chr7_4:39216472-39216491 Msa1153060:CDS 50.0%
GGGGCATAAGGGAAATGTCT+TGG + chr7_4:39216645-39216664 Msa1153060:intron 50.0%
TTCCCCGTTACAAATGCGAC+AGG + chr7_4:39217078-39217097 Msa1153060:intron 50.0%
AGCCTGTCGCATTTGTAACG+GGG - chr7_4:39217083-39217102 None:intergenic 50.0%
CAATGGAATCAGGGTGCAAC+TGG - chr7_4:39217468-39217487 None:intergenic 50.0%
GTTGCACCCTGATTCCATTG+AGG + chr7_4:39217468-39217487 Msa1153060:CDS 50.0%
TCTTGCGAGGTCTGAACAGA+TGG + chr7_4:39217807-39217826 Msa1153060:CDS 50.0%
CGATGCAGTCCATAGTTGTC+AGG + chr7_4:39218156-39218175 Msa1153060:CDS 50.0%
CATGGATCAAGCAATGGGTG+GGG - chr7_4:39219311-39219330 None:intergenic 50.0%
GACATGGATCAAGCAATGGG+TGG - chr7_4:39219313-39219332 None:intergenic 50.0%
TGATCCATGTCTGAAGGGAC+TGG + chr7_4:39219322-39219341 Msa1153060:CDS 50.0%
TTTGCCAGTCCCTTCAGACA+TGG - chr7_4:39219329-39219348 None:intergenic 50.0%
CTCGTACTTGAATACAGGCC+TGG + chr7_4:39219563-39219582 Msa1153060:CDS 50.0%
TACTTGAATACAGGCCTGGG+AGG + chr7_4:39219567-39219586 Msa1153060:CDS 50.0%
ACTGTGACCAAGGCTGAAAC+AGG - chr7_4:39220457-39220476 None:intergenic 50.0%
!! GCAAGGGCACCGCTTAAATT+AGG - chr7_4:39221553-39221572 None:intergenic 50.0%
GTGCCCTTGCTTCAGTACTT+TGG + chr7_4:39221563-39221582 Msa1153060:CDS 50.0%
GTCGCCATCGTTGATATAGC+TGG - chr7_4:39221619-39221638 None:intergenic 50.0%
GCTATATCAACGATGGCGAC+AGG + chr7_4:39221619-39221638 Msa1153060:CDS 50.0%
! GAGGCTGTCCTTTTGTGAGT+TGG + chr7_4:39222219-39222238 Msa1153060:three_prime_UTR 50.0%
GCCCAAAATCGTTCTTCCGC+CGG + chr7_4:39213977-39213996 Msa1153060:CDS 55.0%
! GTCCGGCGGAAGAACGATTT+TGG - chr7_4:39213982-39214001 None:intergenic 55.0%
TCTCACATTCTGCAGCCACG+CGG + chr7_4:39215219-39215238 Msa1153060:intron 55.0%
GGACTCTGGGTCTGTTAGCA+AGG - chr7_4:39215703-39215722 None:intergenic 55.0%
!! TTCGTTGGCTCAGCTCTGGT+CGG + chr7_4:39217160-39217179 Msa1153060:intron 55.0%
TGGTCGGTCAGTAGCCAGTA+TGG + chr7_4:39217176-39217195 Msa1153060:intron 55.0%
! ACATGGTGGCGAAGCTACTG+TGG + chr7_4:39217399-39217418 Msa1153060:CDS 55.0%
AAGCTACTGTGGAGGCTGTG+CGG + chr7_4:39217410-39217429 Msa1153060:CDS 55.0%
CAAGGCTGCTTCCTTTAGCC+TGG + chr7_4:39218055-39218074 Msa1153060:CDS 55.0%
GGGGGGTTGCAGAAAGGAAA+AGG - chr7_4:39218749-39218768 None:intergenic 55.0%
GCTGTGAGCACATGTGCATG+TGG + chr7_4:39218992-39219011 Msa1153060:intron 55.0%
TCAGGCCTGAAGCAAACCCT+GGG + chr7_4:39219258-39219277 Msa1153060:intron 55.0%
! CAGAGATCAAGGAGAGGTGC+TGG + chr7_4:39220194-39220213 Msa1153060:intron 55.0%
GGATCTGCAGATTCCATGGC+TGG + chr7_4:39220315-39220334 Msa1153060:CDS 55.0%
CATCGTCGGGAATCTCCGGT+GGG - chr7_4:39214007-39214026 None:intergenic 60.0%
TCATCGTCGGGAATCTCCGG+TGG - chr7_4:39214008-39214027 None:intergenic 60.0%
TCCAAACTGGGCCTCTGAGC+TGG + chr7_4:39214745-39214764 Msa1153060:intron 60.0%
ACATTCTGCAGCCACGCGGA+CGG + chr7_4:39215223-39215242 Msa1153060:intron 60.0%
!! ATTTACTGGTGCCGTCCGCG+TGG - chr7_4:39215237-39215256 None:intergenic 60.0%
ACGCGGACGGCACCAGTAAA+TGG + chr7_4:39215236-39215255 Msa1153060:CDS 60.0%
!! CACAGTGCAAGCACTGGGAC+AGG - chr7_4:39216162-39216181 None:intergenic 60.0%
CTGTCCCAGTGCTTGCACTG+TGG + chr7_4:39216160-39216179 Msa1153060:intron 60.0%
CGAGCCACAGTGCAAGCACT+GGG - chr7_4:39216167-39216186 None:intergenic 60.0%
ACGAGCCACAGTGCAAGCAC+TGG - chr7_4:39216168-39216187 None:intergenic 60.0%
CCTGACAGTCGCGTCCAACA+AGG - chr7_4:39216445-39216464 None:intergenic 60.0%
CCTTGTTGGACGCGACTGTC+AGG + chr7_4:39216442-39216461 Msa1153060:CDS 60.0%
! TGGTGGCGAAGCTACTGTGG+AGG + chr7_4:39217402-39217421 Msa1153060:CDS 60.0%
GTCAGGCCTGAAGCAAACCC+TGG + chr7_4:39219257-39219276 Msa1153060:intron 60.0%
CAGGCCTGAAGCAAACCCTG+GGG + chr7_4:39219259-39219278 Msa1153060:intron 60.0%
! AGTGCCCCAGGGTTTGCTTC+AGG - chr7_4:39219266-39219285 None:intergenic 60.0%
!! CTGCAGCAGAAAGTGCCCCA+GGG - chr7_4:39219277-39219296 None:intergenic 60.0%
!! ACTGCAGCAGAAAGTGCCCC+AGG - chr7_4:39219278-39219297 None:intergenic 60.0%
! GGGGCACTTTCTGCTGCAGT+TGG + chr7_4:39219278-39219297 Msa1153060:CDS 60.0%
ACTGGAGGGGGCTCTGTTTC+TGG + chr7_4:39220529-39220548 Msa1153060:CDS 60.0%
GGAATCTCCGGTGGGAGGTC+CGG - chr7_4:39213999-39214018 None:intergenic 65.0%
GCCAGCTCAGAGGCCCAGTT+TGG - chr7_4:39214749-39214768 None:intergenic 65.0%
TCTTCCGCCGGACCTCCCAC+CGG + chr7_4:39213989-39214008 Msa1153060:CDS 70.0%
ATCTCCGGTGGGAGGTCCGG+CGG - chr7_4:39213996-39214015 None:intergenic 70.0%
CGTCGGGAATCTCCGGTGGG+AGG - chr7_4:39214004-39214023 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 39213911 39222336 39213911 ID=Msa1153060;Name=Msa1153060
chr7_4 mRNA 39213911 39222336 39213911 ID=Msa1153060-mRNA-1;Parent=Msa1153060;Name=Msa1153060-mRNA-1;_AED=0.05;_eAED=0.05;_QI=43|1|1|1|1|1|13|331|835
chr7_4 exon 39213911 39214120 39213911 ID=Msa1153060-mRNA-1:exon:9500;Parent=Msa1153060-mRNA-1
chr7_4 exon 39214957 39215126 39214957 ID=Msa1153060-mRNA-1:exon:9501;Parent=Msa1153060-mRNA-1
chr7_4 exon 39215234 39215427 39215234 ID=Msa1153060-mRNA-1:exon:9502;Parent=Msa1153060-mRNA-1
chr7_4 exon 39215624 39215832 39215624 ID=Msa1153060-mRNA-1:exon:9503;Parent=Msa1153060-mRNA-1
chr7_4 exon 39215966 39216068 39215966 ID=Msa1153060-mRNA-1:exon:9504;Parent=Msa1153060-mRNA-1
chr7_4 exon 39216330 39216493 39216330 ID=Msa1153060-mRNA-1:exon:9505;Parent=Msa1153060-mRNA-1
chr7_4 exon 39217351 39217489 39217351 ID=Msa1153060-mRNA-1:exon:9506;Parent=Msa1153060-mRNA-1
chr7_4 exon 39217778 39217957 39217778 ID=Msa1153060-mRNA-1:exon:9507;Parent=Msa1153060-mRNA-1
chr7_4 exon 39218041 39218177 39218041 ID=Msa1153060-mRNA-1:exon:9508;Parent=Msa1153060-mRNA-1
chr7_4 exon 39219262 39219588 39219262 ID=Msa1153060-mRNA-1:exon:9509;Parent=Msa1153060-mRNA-1
chr7_4 exon 39220197 39220336 39220197 ID=Msa1153060-mRNA-1:exon:9510;Parent=Msa1153060-mRNA-1
chr7_4 exon 39220464 39220561 39220464 ID=Msa1153060-mRNA-1:exon:9511;Parent=Msa1153060-mRNA-1
chr7_4 exon 39221526 39222336 39221526 ID=Msa1153060-mRNA-1:exon:9512;Parent=Msa1153060-mRNA-1
chr7_4 five_prime_UTR 39213911 39213953 39213911 ID=Msa1153060-mRNA-1:five_prime_utr;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39213954 39214120 39213954 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39214957 39215126 39214957 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39215234 39215427 39215234 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39215624 39215832 39215624 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39215966 39216068 39215966 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39216330 39216493 39216330 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39217351 39217489 39217351 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39217778 39217957 39217778 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39218041 39218177 39218041 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39219262 39219588 39219262 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39220197 39220336 39220197 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39220464 39220561 39220464 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 CDS 39221526 39222005 39221526 ID=Msa1153060-mRNA-1:cds;Parent=Msa1153060-mRNA-1
chr7_4 three_prime_UTR 39222006 39222336 39222006 ID=Msa1153060-mRNA-1:three_prime_utr;Parent=Msa1153060-mRNA-1
Gene Sequence

>Msa1153060

ATGGGCAAGAAGCAGAAGCAGCAGCCCAAAATCGTTCTTCCGCCGGACCTCCCACCGGAGATTCCCGACGATGAAGTCGAATATTCCGACGACGATGTCAAATTCGTCAACGAAAATCGTGAATTCGCTTCCTTGATTTCTTCCTTAGACACTAAATCAATCACCAAGCATGTTACACGGGTTGCTGATGCTAAAGACGATACTTTGGAGAAACTATACGAGCAACGACGTTTGAAAAAAGATGCTAAGAAAGAAACAGAAGAAACAGGTTTGCAGGTTGATCGAGTAGATGCTCTTCCTGTCAAGTCCTTAGATGGAGAAGTCTATTATCGGACAGCCACGCGGACGGCACCAGTAAATGGTCCAAGCAAAGAGGAAACTGGAGAGGATGACAATGAAGACAAAGGTTTTGTGAAGCTAACTAAGGCTGAAAAAAGAGCCAAACTTAAGAAAATTAGAAAAGAGGGGAAGAAACAAGGGAAAGAGGTGGCTAAAGAAGAAGTGGAAGAAGCACCACAGTCTACAGTTTTGGATGAGGTTAAAGAAGATCTTAAAGCTGAAGAGAATTTTGAAAGTAAGAAGTGTAAACTTGCAGAGTTGGGAAATGCCTTGCTAACAGACCCAGAGTCCAATATTAAATTTCTGAAGGATTTGGTACAGCTATCTAAAGATAAGGATCTCACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAGAGATATTATACCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAACAAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTTTTATGAATCAACTCTCCTCTCTGCATACAAGGCTTACTTGCAAAGGCTGATAGCCTTAGAAAAGCTGCCTTCATTTCAGCTTGTTGCAGTTCAATGTATTTGTTCTTTGCTTGATAAAAATCCCCATTTCAACTTTCGTGAAACCTTGTTGGACGCGACTGTCAGGAACATAAGCTCCAGTAATGAGGCCATAAGGAAATTTTGCTGTTCCACAATTAAGTCACTCTTTACAAATGAGGGTAAACATGGTGGCGAAGCTACTGTGGAGGCTGTGCGGCTGATTTCTTATCAAGTTAAAGATCATAATTGCCAGTTGCACCCTGATTCCATTGAGGTTTTCTTGTCTCTTTCATTTGATGAGGATCTTGCGAGGTCTGAACAGATGGAAAAGGATAAAAAATTTAAAGACAAGAAATTTGGTAAGAAAAGAAAAAATACGGAGGCATCAAATCAGTTGCCTGAAAATGACAGAAAGAAAAGCAGGCAAGAGTCGATTTCGAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCTTCCTTTAGCCTGGATGTTATGGAGAAGAGACAGATGCAAACAAAAACACTCTCTGCTATGTTTGAGATATACTTTCGCATTTTGAAGCATACGATGCAGTCCATAGTTGTCAGGCCTGAAGCAAACCCTGGGGCACTTTCTGCTGCAGTTGGAATGGAACCCCACCCATTGCTTGATCCATGTCTGAAGGGACTGGCAAAGTTCTCGCACCTGATTGACCTTGATTTCCTGGGTGATCTAATGAACCATTTGAAAATACTTGCTGCTGGAGGTAGCAACACATCAGAGAAGTTTCCTAAATGTCTGACTGTATCTGAACGCCTCCAATGTTGCATCGTTGCTTTTAAAGTGATGAGAACCAATCTTGATGCCTTGAATGTTGATCTACAGGACTTCACTGTCCATCTTTACAATCTCGTACTTGAATACAGGCCTGGGAGAGATCAAGGAGAGGTGCTGGCAGAAGCTTTGAAGATAATGTTGTGTGACGATAGGCAGCATGACATGCAAAAGGCCGCTGCATTTATAAAACGTTTGGCTACATTGTCACTGTCTGTTGGATCTGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTCCTTCTCAAGAATGTCAAGTGCAGAAATCTATTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGCACAATTCCGAAATATCTACCATATTCAACTGATCCTAATTTAAGCGGTGCCCTTGCTTCAGTACTTTGGGAACTCAGTCTTTTGTCCAAACACTATCATCCAGCTATATCAACGATGGCGACAGGCCTTTCAAGCATGAGCACTGAACAAAACCAAGTCTTCCTCTCCAAATCCTCTCCTTTACTAGCTTTCAAGGACATGTCTATTGACCAGGAACTAAGTTTTGAACAAAGTGGCAGTATCAAATTAAACAACAAGAGGAAACGATCACATGGCAATGCTACATCAGATTCCATTGGTTCCACTACAGTAACGAGTTCATTCAACGAGGATGATTTGCGAAAGAAATTTAGTTCTCATTTTATGGTTCTTCATGATATCAAGGAGAACGAAAGGTTGAGAAGTAAGATGGATAAGACCGCAAAATCACTTCAGCTATATGAACAATATAAGAATCAAAAGAAGAAACGATCAAAAGCAAGTAAATGA

Protein sequence

>Msa1153060

MGKKQKQQPKIVLPPDLPPEIPDDEVEYSDDDVKFVNENREFASLISSLDTKSITKHVTRVADAKDDTLEKLYEQRRLKKDAKKETEETGLQVDRVDALPVKSLDGEVYYRTATRTAPVNGPSKEETGEDDNEDKGFVKLTKAEKRAKLKKIRKEGKKQGKEVAKEEVEEAPQSTVLDEVKEDLKAEENFESKKCKLAELGNALLTDPESNIKFLKDLVQLSKDKDLTIVKLGLLSLLAVFRDIIPGYRIRLPTEKEQEMKVSKTVRKMRFYESTLLSAYKAYLQRLIALEKLPSFQLVAVQCICSLLDKNPHFNFRETLLDATVRNISSSNEAIRKFCCSTIKSLFTNEGKHGGEATVEAVRLISYQVKDHNCQLHPDSIEVFLSLSFDEDLARSEQMEKDKKFKDKKFGKKRKNTEASNQLPENDRKKSRQESISKTREEVEADYKAASFSLDVMEKRQMQTKTLSAMFEIYFRILKHTMQSIVVRPEANPGALSAAVGMEPHPLLDPCLKGLAKFSHLIDLDFLGDLMNHLKILAAGGSNTSEKFPKCLTVSERLQCCIVAFKVMRTNLDALNVDLQDFTVHLYNLVLEYRPGRDQGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATLSLSVGSADSMAALVTVKHLLLKNVKCRNLLENDTGGGSVSGTIPKYLPYSTDPNLSGALASVLWELSLLSKHYHPAISTMATGLSSMSTEQNQVFLSKSSPLLAFKDMSIDQELSFEQSGSIKLNNKRKRSHGNATSDSIGSTTVTSSFNEDDLRKKFSSHFMVLHDIKENERLRSKMDKTAKSLQLYEQYKNQKKKRSKASK*