AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1383960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383960 MtrunA17_Chr4g0074041 88.657 864 54 9 1 829 1 855 0.0 1501
Msa1383960 MtrunA17_Chr6g0458441 41.368 307 161 5 89 382 125 425 1.06e-69 243
Msa1383960 MtrunA17_Chr8g0366721 40.127 314 151 7 85 382 206 498 1.70e-69 239
Msa1383960 MtrunA17_Chr5g0411271 37.950 361 186 9 46 382 103 449 1.41e-67 238
Msa1383960 MtrunA17_Chr6g0458421 37.391 345 191 7 89 420 27 359 1.24e-66 232
Msa1383960 MtrunA17_Chr6g0458431 37.901 343 188 7 89 418 92 422 1.64e-66 234
Msa1383960 MtrunA17_Chr2g0313171 38.398 362 196 10 92 434 465 818 2.55e-62 227
Msa1383960 MtrunA17_Chr8g0365831 37.152 323 168 8 83 383 156 465 2.91e-62 219
Msa1383960 MtrunA17_Chr3g0133061 37.176 347 190 9 92 417 585 924 6.87e-62 227
Msa1383960 MtrunA17_Chr1g0150541 39.550 311 162 8 92 382 182 486 1.42e-60 220
Msa1383960 MtrunA17_Chr2g0312901 38.636 308 170 6 92 382 23 328 1.33e-59 214
Msa1383960 MtrunA17_Chr5g0427301 39.748 317 167 9 92 392 543 851 2.57e-58 216
Msa1383960 MtrunA17_Chr5g0412381 38.762 307 167 8 92 382 425 726 1.38e-57 213
Msa1383960 MtrunA17_Chr1g0149991 31.232 349 176 12 92 382 182 524 4.87e-40 156
Msa1383960 MtrunA17_Chr4g0062561 31.940 335 191 9 91 409 253 566 1.14e-39 158
Msa1383960 MtrunA17_Chr4g0062561 30.201 298 170 7 109 386 577 856 1.16e-30 129
Msa1383960 MtrunA17_Chr3g0123951 30.844 308 181 8 92 371 24 327 1.96e-34 135
Msa1383960 MtrunA17_Chr8g0382161 31.935 310 175 8 92 371 24 327 5.88e-34 134
Msa1383960 MtrunA17_Chr4g0062491 28.896 308 177 9 102 382 1 293 1.09e-28 117
Msa1383960 MtrunA17_Chr4g0064671 31.513 238 94 10 210 382 12 245 5.40e-25 105
Msa1383960 MtrunA17_Chr1g0148321 28.571 315 197 11 67 371 83 379 1.03e-21 101
Msa1383960 MtrunA17_Chr3g0138791 28.720 289 182 10 91 371 107 379 1.15e-20 98.2
Msa1383960 MtrunA17_Chr4g0020741 26.912 353 188 12 92 380 183 529 2.47e-19 92.4
Msa1383960 MtrunA17_Chr2g0322211 33.333 156 88 5 250 391 717 870 1.25e-14 78.2
Msa1383960 MtrunA17_Chr1g0189101 30.387 181 98 5 91 245 320 498 1.75e-11 68.2
Msa1383960 MtrunA17_Chr7g0267641 34.247 146 79 6 250 380 791 934 4.73e-11 66.6
Msa1383960 MtrunA17_Chr7g0255591 33.775 151 82 7 250 384 754 902 5.81e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383960 AT5G57990.1 58.910 477 165 10 21 475 38 505 0.0 542
Msa1383960 AT2G24640.2 39.692 325 171 9 92 399 5 321 9.64e-62 217
Msa1383960 AT3G14400.1 39.634 328 173 9 87 391 18 343 5.33e-61 219
Msa1383960 AT2G24640.1 39.385 325 172 9 92 399 175 491 6.97e-60 216
Msa1383960 AT4G31670.1 39.482 309 165 8 92 382 169 473 1.70e-59 214
Msa1383960 AT1G17110.2 40.584 308 163 7 92 382 443 747 1.99e-57 213
Msa1383960 AT1G17110.3 40.584 308 163 7 92 382 439 743 2.06e-57 213
Msa1383960 AT1G17110.1 40.584 308 163 7 92 382 439 743 2.06e-57 213
Msa1383960 AT5G46740.1 37.821 312 174 5 89 383 161 469 9.20e-56 205
Msa1383960 AT4G17895.1 35.821 335 182 8 67 383 157 476 2.63e-55 203
Msa1383960 AT5G65450.1 38.312 308 170 9 92 383 330 633 4.03e-54 201
Msa1383960 AT5G65450.2 38.312 308 170 9 92 383 349 652 4.74e-54 201
Msa1383960 AT4G24560.1 37.013 308 173 8 92 382 543 846 1.16e-49 190
Msa1383960 AT5G46740.2 36.015 261 149 4 138 383 3 260 1.81e-40 157
Msa1383960 AT2G22310.1 31.270 307 180 9 92 371 24 326 2.44e-33 132
Msa1383960 AT4G39910.1 31.310 313 177 11 92 371 24 331 1.25e-32 130
Msa1383960 AT5G10790.2 27.671 365 180 13 92 383 49 402 4.30e-28 118
Msa1383960 AT2G22310.3 29.831 295 176 9 104 371 4 294 1.44e-27 115
Msa1383960 AT5G10790.1 27.671 365 180 13 92 383 178 531 3.92e-27 117
Msa1383960 AT2G22310.2 31.034 261 151 8 136 371 33 289 1.23e-26 112
Msa1383960 AT3G49600.3 28.374 289 182 9 91 371 106 377 2.15e-21 100
Msa1383960 AT3G49600.2 28.374 289 182 9 91 371 106 377 2.22e-21 100
Msa1383960 AT3G49600.1 28.374 289 182 9 91 371 106 377 2.22e-21 100
Msa1383960 AT3G11910.4 26.621 293 189 12 91 373 197 473 7.26e-18 89.4
Msa1383960 AT3G11910.2 26.621 293 189 12 91 373 197 473 7.26e-18 89.4
Msa1383960 AT3G11910.3 26.621 293 189 12 91 373 198 474 7.52e-18 89.4
Msa1383960 AT3G11910.1 26.621 293 189 12 91 373 198 474 7.52e-18 89.4
Msa1383960 AT5G06600.1 25.939 293 191 12 91 373 199 475 7.37e-17 86.3
Msa1383960 AT5G06600.2 25.939 293 191 12 91 373 198 474 7.69e-17 86.3
Msa1383960 AT5G06600.3 25.939 293 191 12 91 373 199 475 7.99e-17 85.9
Msa1383960 AT5G22030.2 35.135 148 79 6 250 382 765 910 2.28e-13 74.7
Msa1383960 AT5G22030.1 35.135 148 79 6 250 382 723 868 2.47e-13 74.7
Msa1383960 AT1G32850.1 26.971 241 142 7 37 245 241 479 1.10e-12 72.4
Msa1383960 AT2G40930.1 30.928 194 103 7 81 245 304 495 1.91e-12 71.6
Msa1383960 AT2G40930.2 30.928 194 103 7 81 245 304 495 1.91e-12 71.6
Msa1383960 AT2G32780.1 29.949 197 125 8 59 245 167 360 8.78e-12 69.7
Msa1383960 AT1G04860.1 27.111 225 154 6 25 243 163 383 2.28e-11 68.2

Find 170 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACGATTGGCTCAATTAA+AGG 0.195874 tig0020633:-9327 None:intergenic
CCGAGAAATCTAAGTTAAAA+AGG 0.200867 tig0020633:+12253 Msa1383960:CDS
GTTCGGAGGTGGTAGGGTTT+AGG 0.202661 tig0020633:-5107 None:intergenic
TTCGGAGGTGGTAGGGTTTA+GGG 0.236829 tig0020633:-5106 None:intergenic
TTCGATTTGAGAATTGAAAA+TGG 0.242796 tig0020633:-4929 None:intergenic
TTTCACAGCTGCAGAACTTT+TGG 0.247142 tig0020633:+6839 Msa1383960:CDS
TACGGGGTCCTGGTTCATTC+TGG 0.269868 tig0020633:+7215 Msa1383960:CDS
AACAATGTCAGAAACTTTAA+TGG 0.270474 tig0020633:+4975 Msa1383960:exon
CATAAATGCTGCCTGCCTTC+TGG 0.271427 tig0020633:+6465 Msa1383960:CDS
GGTGCTGGGCTTTGGAATCT+TGG 0.293228 tig0020633:+5401 Msa1383960:CDS
AATTCTGAATTCTCCGAGTT+TGG 0.298386 tig0020633:+5180 Msa1383960:CDS
TGAAGCAGCCAACAAAATTT+AGG 0.319901 tig0020633:-12397 None:intergenic
TCATCAGAGAAGAACGTAAA+TGG 0.320339 tig0020633:-9995 None:intergenic
CATGTTTACCAGTAACTGTT+TGG 0.323728 tig0020633:-9356 None:intergenic
AATATTATCGCCACAGGATA+TGG 0.329960 tig0020633:+5728 Msa1383960:CDS
TCTTCCTTAGCGATATTAAC+AGG 0.334463 tig0020633:-8865 None:intergenic
TCAAGTTCTGATTTAGCAAC+AGG 0.337395 tig0020633:-9174 None:intergenic
ATGTTTACCAGTAACTGTTT+GGG 0.340036 tig0020633:-9355 None:intergenic
AGTTTAGTTCATAAGATCTT+TGG 0.341062 tig0020633:+6522 Msa1383960:CDS
CATCTTCCTGCCTAGCCTTT+CGG 0.341162 tig0020633:-6407 None:intergenic
TTCAATTACCGATTCATAGA+AGG 0.341460 tig0020633:-12624 None:intergenic
AATCTTTCAGTGCATTGGTT+GGG 0.341604 tig0020633:-8930 None:intergenic
TTCACATATGATATCCTTGA+TGG 0.348753 tig0020633:-9033 None:intergenic
ATTTCAAAGACTAATGTTAC+TGG 0.348939 tig0020633:+8889 Msa1383960:CDS
AGTAATCCCCAAACAGTTAC+TGG 0.354666 tig0020633:+9348 Msa1383960:CDS
GGTTTCGATGTGAAAATCAT+TGG 0.359886 tig0020633:-5085 None:intergenic
ATGATTGATCCCTTGTACTT+TGG 0.360341 tig0020633:-9810 None:intergenic
AAATGAATTGCTAGCACATA+AGG 0.368393 tig0020633:-6942 None:intergenic
GATGTGAAATACTCGTTATA+CGG 0.368592 tig0020633:+7197 Msa1383960:CDS
TTCAAAACATCTCCAGTGTT+TGG 0.369310 tig0020633:-12367 None:intergenic
GTGTTGTTTGGTAATAGTTT+CGG 0.372171 tig0020633:-5004 None:intergenic
TGAATTCTCCGAGTTTGGTT+TGG 0.374592 tig0020633:+5185 Msa1383960:CDS
CTCCGAGTTTGGTTTGGATC+CGG 0.385695 tig0020633:+5191 Msa1383960:CDS
GGAAGATGCACATGAGTATA+TGG 0.387695 tig0020633:+6422 Msa1383960:CDS
ATATAACTTAACTCCAACTC+TGG 0.390379 tig0020633:+12318 Msa1383960:exon
TCCCTACCAGTTCACACATT+TGG 0.392445 tig0020633:-12062 None:intergenic
ATAATTTATTAAATCTTTCA+AGG 0.397473 tig0020633:+12682 Msa1383960:three_prime_UTR
AGTGCATTGGTTGGGGTTGA+AGG 0.399113 tig0020633:-8922 None:intergenic
GCGATATTAACAGGCTTCCT+TGG 0.401218 tig0020633:-8856 None:intergenic
GGTTGGAACTTCAAATGGTT+TGG 0.404321 tig0020633:+9674 Msa1383960:intron
CAGGAAAGAGAAAGAAGTTA+AGG 0.405411 tig0020633:+12181 Msa1383960:CDS
TGGTCCAACATCTGATGAAA+TGG 0.409259 tig0020633:-9955 None:intergenic
AAAGGCAGATTCACTACAAA+AGG 0.410604 tig0020633:+6806 Msa1383960:CDS
ATCTTTCAGTGCATTGGTTG+GGG 0.413722 tig0020633:-8929 None:intergenic
AGCCGTGCCCTGCAAGCAAC+TGG 0.416890 tig0020633:+5702 Msa1383960:CDS
TAAGAACGGATCAAATTTGT+TGG 0.418580 tig0020633:-6763 None:intergenic
TTTGTTGGCTGCTTCATGTT+GGG 0.420084 tig0020633:+12404 Msa1383960:three_prime_UTR
TGGTGGTCGTCTTCGAAGTC+AGG 0.420888 tig0020633:+6542 Msa1383960:CDS
ATCAAGAGTTGAGTCTTTCA+AGG 0.423114 tig0020633:-9754 None:intergenic
ATATTCGTCCAGTTGCTTGC+AGG 0.423869 tig0020633:-5710 None:intergenic
ATATTTATAGGCCACATTGC+TGG 0.423929 tig0020633:+5645 Msa1383960:intron
AGGTGTTTGAAGCAGAGTTT+TGG 0.435782 tig0020633:+12201 Msa1383960:CDS
GGAAACAAGTTGTCGGTGTT+CGG 0.437281 tig0020633:-5124 None:intergenic
TGGATAATCTTTCAGTGCAT+TGG 0.438556 tig0020633:-8935 None:intergenic
TTCTATGAATCGGTAATTGA+AGG 0.440974 tig0020633:+12626 Msa1383960:three_prime_UTR
CTGAAGGAGAGATTATAAAC+AGG 0.443337 tig0020633:+10027 Msa1383960:CDS
CTGAAATGGATCGTGTTGTT+TGG 0.444337 tig0020633:-5016 None:intergenic
GAGTTAAGTTATATTCTGAA+TGG 0.447712 tig0020633:-12309 None:intergenic
GCAACGGCATCAACTTCAGC+GGG 0.455516 tig0020633:-9507 None:intergenic
GTATCCTCAGTAAACAGATT+AGG 0.458345 tig0020633:-9279 None:intergenic
TCATTGGAAAAGCCTTTGAA+TGG 0.464047 tig0020633:-5069 None:intergenic
ATTCATCTGTGTAAGTTCCT+TGG 0.467718 tig0020633:-9136 None:intergenic
GTAGTCTACAAGATGATAAG+AGG 0.470662 tig0020633:+10108 Msa1383960:CDS
ATCATATGTGAAGGATGCTC+TGG 0.470737 tig0020633:+9044 Msa1383960:CDS
ATGTTGGGATCGAGCTATAG+AGG 0.471349 tig0020633:+12419 Msa1383960:three_prime_UTR
GCACTGAAAGATTATCCAAA+TGG 0.475394 tig0020633:+8940 Msa1383960:CDS
GTCCAGTTGCTTGCAGGGCA+CGG 0.477135 tig0020633:-5704 None:intergenic
GTCGGTGTTCGGAGGTGGTA+GGG 0.479437 tig0020633:-5113 None:intergenic
AAATGTTTAGTTGCACCAGC+TGG 0.481460 tig0020633:+9249 Msa1383960:CDS
GAGGATTTCTGAGGCTAGAA+TGG 0.485733 tig0020633:-12287 None:intergenic
TAATCTTTCAGTGCATTGGT+TGG 0.486650 tig0020633:-8931 None:intergenic
ATCATCTTGTAGACTACATC+GGG 0.486691 tig0020633:-10102 None:intergenic
CGCCTTTCGTTGAGATGCCT+AGG 0.489096 tig0020633:+9849 Msa1383960:CDS
ATGTGAAATACTCGTTATAC+GGG 0.489190 tig0020633:+7198 Msa1383960:CDS
CAAACAGCTAACAATTCATA+AGG 0.490192 tig0020633:+6917 Msa1383960:CDS
ATTATTGATTTGCCAAACAC+TGG 0.490986 tig0020633:+12355 Msa1383960:three_prime_UTR
TATTCGTCCAGTTGCTTGCA+GGG 0.491467 tig0020633:-5709 None:intergenic
TGTCGGTGTTCGGAGGTGGT+AGG 0.494431 tig0020633:-5114 None:intergenic
CAATTTCCGAAAGGCTAGGC+AGG 0.495854 tig0020633:+6401 Msa1383960:CDS
GATGTTGGACCATCTATATC+CGG 0.498181 tig0020633:+9966 Msa1383960:CDS
CTTGCCATTTCATCAGATGT+TGG 0.501211 tig0020633:+9951 Msa1383960:CDS
TTAGTTCATAAGATCTTTGG+TGG 0.504698 tig0020633:+6525 Msa1383960:CDS
GTTTGGGGATTACTGACGAT+TGG 0.506822 tig0020633:-9339 None:intergenic
CTCCGGATCCAAACCAAACT+CGG 0.508386 tig0020633:-5193 None:intergenic
TGTTAAATGCTGATCCATCA+AGG 0.509478 tig0020633:+9019 Msa1383960:CDS
AGAGCATAACAGAGAAGCGA+AGG 0.512336 tig0020633:-4883 None:intergenic
ATCTTTATGTTAGGGTCATG+AGG 0.515431 tig0020633:-6978 None:intergenic
TTCTGAGTTTCTGCAGTCAA+AGG 0.516175 tig0020633:-8991 None:intergenic
ACTTTGCAGATATGCAGCTA+AGG 0.517863 tig0020633:-5474 None:intergenic
AAATAACATGTGGTATACCT+TGG 0.522653 tig0020633:+7283 Msa1383960:CDS
ATACTCGTTATACGGGGTCC+TGG 0.528817 tig0020633:+7205 Msa1383960:CDS
AGATTAGGTTTGTCTCCAGC+TGG 0.530309 tig0020633:-9264 None:intergenic
TGCGGACATAGCAGTAATAG+TGG 0.532105 tig0020633:-7256 None:intergenic
TGCAACGGCATCAACTTCAG+CGG 0.535551 tig0020633:-9508 None:intergenic
TTAAGTTATATTCTGAATGG+AGG 0.536840 tig0020633:-12306 None:intergenic
GAACGGATCAAATTTGTTGG+AGG 0.536981 tig0020633:-6760 None:intergenic
TGAATTGAGAAATGTGCTAA+GGG 0.538276 tig0020633:-12468 None:intergenic
GAGCTGCCAAATGTGTGAAC+TGG 0.539009 tig0020633:+12056 Msa1383960:CDS
CAGTACCCGGGTGTCATCCA+AGG 0.539523 tig0020633:-7300 None:intergenic
CGTTGAGATGCCTAGGCCCG+CGG 0.545368 tig0020633:+9856 Msa1383960:CDS
TTTATCTAAACGTACTTCCA+AGG 0.546275 tig0020633:+9119 Msa1383960:CDS
CACCTCAATTTACAGGGATG+AGG 0.546911 tig0020633:+12149 Msa1383960:intron
AAGTTGTCGGTGTTCGGAGG+TGG 0.550158 tig0020633:-5118 None:intergenic
AAAGAAGTTTCCAAAGTACA+AGG 0.550879 tig0020633:+9800 Msa1383960:CDS
GACTGAATCTTGAGCTGCAA+CGG 0.557353 tig0020633:-9523 None:intergenic
ATGAATTGAGAAATGTGCTA+AGG 0.559134 tig0020633:-12469 None:intergenic
AGATTATAAACAGGATGGAT+CGG 0.559141 tig0020633:+10036 Msa1383960:CDS
TTATCATCCTTAGATCACTC+TGG 0.559615 tig0020633:+9201 Msa1383960:CDS
GTAATTCCGAGGCTGAGCTC+CGG 0.562185 tig0020633:-5210 None:intergenic
CTGCGATGATTGAATATTAG+CGG 0.564056 tig0020633:-5145 None:intergenic
TTGGATCCGGAGCTCAGCCT+CGG 0.567233 tig0020633:+5204 Msa1383960:CDS
TCAAGACTTAAATCTAAGAA+CGG 0.569509 tig0020633:-6777 None:intergenic
CTGGTTCAGCAAAATAATAG+TGG 0.573221 tig0020633:+9063 Msa1383960:CDS
GAAACACTTACCTCATCAGA+CGG 0.573882 tig0020633:-9396 None:intergenic
TCTGGAAAAGACAATGTGGC+TGG 0.575944 tig0020633:+9219 Msa1383960:CDS
ATCAAGGATATCATATGTGA+AGG 0.578215 tig0020633:+9035 Msa1383960:CDS
CTTTGCAGATATGCAGCTAA+GGG 0.578834 tig0020633:-5473 None:intergenic
AACACTCACTATTCTGCGAA+AGG 0.579080 tig0020633:-5232 None:intergenic
AAATTACGTAAGATATCCAA+TGG 0.581979 tig0020633:-12726 None:intergenic
TATAACTTAACTCCAACTCT+GGG 0.582591 tig0020633:+12319 Msa1383960:exon
TTATCGCCACAGGATATGGT+TGG 0.582632 tig0020633:+5732 Msa1383960:CDS
TACTAAAACCAGAATGAACC+AGG 0.585712 tig0020633:-7223 None:intergenic
ACAAACTTGTCAGAGTGCGC+TGG 0.585740 tig0020633:+9546 Msa1383960:CDS
AATTTGAAACCTTTCGTCAG+CGG 0.589809 tig0020633:+7032 Msa1383960:CDS
GTTACAAAGAAACCCAGAGT+TGG 0.592564 tig0020633:-12331 None:intergenic
TATTAGCGGAAACAAGTTGT+CGG 0.594262 tig0020633:-5131 None:intergenic
TGTTGTGACTCGAGGTCTAG+AGG 0.594563 tig0020633:+10148 Msa1383960:CDS
GGTATACCTTGGATGACACC+CGG 0.597085 tig0020633:+7294 Msa1383960:CDS
TCTGCTTGCAACGTTGACAA+TGG 0.597440 tig0020633:-6881 None:intergenic
TATCATCTTGTAGACTACAT+CGG 0.598160 tig0020633:-10103 None:intergenic
AACAAGTTGTCGGTGTTCGG+AGG 0.599632 tig0020633:-5121 None:intergenic
TCTTTATGTTAGGGTCATGA+GGG 0.602140 tig0020633:-6977 None:intergenic
GAAGCCTGTTAATATCGCTA+AGG 0.602352 tig0020633:+8861 Msa1383960:CDS
CAAGTTCTGATTTAGCAACA+GGG 0.602668 tig0020633:-9173 None:intergenic
AGGAGAGATTATAAACAGGA+TGG 0.603417 tig0020633:+10031 Msa1383960:CDS
TGGACGAATATTATCGCCAC+AGG 0.607344 tig0020633:+5722 Msa1383960:CDS
TGCAGCTAAGGGCTCAGTGT+AGG 0.610444 tig0020633:-5462 None:intergenic
GATTCACTCGGTACTCCAGA+AGG 0.612834 tig0020633:-6480 None:intergenic
ACCACATGTTATTTGAAGTG+CGG 0.614693 tig0020633:-7274 None:intergenic
CATAATACTGTTGTGACTCG+AGG 0.621809 tig0020633:+10140 Msa1383960:CDS
CACGCAATTTCCGAAAGGCT+AGG 0.625284 tig0020633:+6397 Msa1383960:CDS
TAGTCTACAAGATGATAAGA+GGG 0.626184 tig0020633:+10109 Msa1383960:CDS
CATAACATCACCGTCTGATG+AGG 0.627169 tig0020633:+9386 Msa1383960:CDS
TGTTTACCAGTAACTGTTTG+GGG 0.629934 tig0020633:-9354 None:intergenic
TTCTGAATGGAGGATTTCTG+AGG 0.631068 tig0020633:-12296 None:intergenic
AGATTATCCAAATGGTCATG+TGG 0.631348 tig0020633:+8948 Msa1383960:CDS
CTAGGCATCTCAACGAAAGG+CGG 0.637188 tig0020633:-9848 None:intergenic
CTGATGAAGCATGATGCTGA+AGG 0.642291 tig0020633:+10011 Msa1383960:CDS
TTAGCTGCATATCTGCAAAG+TGG 0.645703 tig0020633:+5476 Msa1383960:CDS
GAGCATAACAGAGAAGCGAA+GGG 0.651721 tig0020633:-4882 None:intergenic
AACGGCATCAACTTCAGCGG+GGG 0.652356 tig0020633:-9505 None:intergenic
CGAGGTCTAGAGGAGACAGT+TGG 0.658287 tig0020633:+10158 Msa1383960:CDS
AGGGATGAGGAATATGACAC+AGG 0.660400 tig0020633:+12162 Msa1383960:intron
AGATTTCCAACCATATCCTG+TGG 0.661150 tig0020633:-5738 None:intergenic
CATATCACGCAATTTCCGAA+AGG 0.662406 tig0020633:+6392 Msa1383960:CDS
TCCGCACTTCAAATAACATG+TGG 0.663923 tig0020633:+7273 Msa1383960:CDS
GTATACCTTGGATGACACCC+GGG 0.665022 tig0020633:+7295 Msa1383960:CDS
AGGATATGGTTGGAAATCTG+CGG 0.669968 tig0020633:+5742 Msa1383960:CDS
AAAGCACCAGGTGATTCACT+CGG 0.673222 tig0020633:-6492 None:intergenic
AAGAAGTTTCCAAAGTACAA+GGG 0.674699 tig0020633:+9801 Msa1383960:CDS
GAATTGAGAAATGTGCTAAG+GGG 0.688139 tig0020633:-12467 None:intergenic
TTCTGCGAAAGGTAATTCCG+AGG 0.688679 tig0020633:-5221 None:intergenic
CAACGGCATCAACTTCAGCG+GGG 0.692880 tig0020633:-9506 None:intergenic
GGAGTACCGAGTGAATCACC+TGG 0.694367 tig0020633:+6486 Msa1383960:CDS
CAAACCTAATCTGTTTACTG+AGG 0.706880 tig0020633:+9275 Msa1383960:CDS
GCGCACAAAATCCAGCAATG+TGG 0.709165 tig0020633:-5656 None:intergenic
TCACTCTGGAAAAGACAATG+TGG 0.718425 tig0020633:+9215 Msa1383960:CDS
GAAGAAATGAGTGTGCATTG+TGG 0.745593 tig0020633:-4839 None:intergenic
GAAAGGTTTCAAATTCAGTG+CGG 0.748507 tig0020633:-7024 None:intergenic
TGTGAAATACTCGTTATACG+GGG 0.780579 tig0020633:+7199 Msa1383960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATATTATAATACAAATA+TGG - tig0020633:5820-5839 None:intergenic 10.0%
!! GTTATAAAAAAAAAACTTAT+TGG - tig0020633:5922-5941 None:intergenic 10.0%
!! TAAAAAAATTATAAAAAGCA+AGG - tig0020633:8353-8372 None:intergenic 10.0%
!! TTATATTGAAAAAATCAAAA+AGG + tig0020633:8444-8463 Msa1383960:intron 10.0%
!!! AATTTTATTATTTTTGTTCT+AGG + tig0020633:10253-10272 Msa1383960:intron 10.0%
!!! ATTTTATTATTTTTGTTCTA+GGG + tig0020633:10254-10273 Msa1383960:intron 10.0%
!! ATAATTTATTAAATCTTTCA+AGG + tig0020633:12682-12701 Msa1383960:three_prime_UTR 10.0%
!!! AGATAATTTTACTTTTTCTA+AGG + tig0020633:6137-6156 Msa1383960:intron 15.0%
!! ATTGTTATCTTTGATATTTA+AGG + tig0020633:6625-6644 Msa1383960:intron 15.0%
!!! TTTAAGTCTTGAAATTTTAA+AGG + tig0020633:6788-6807 Msa1383960:CDS 15.0%
!!! TCTTTTTAATCTTTATGTTA+GGG - tig0020633:6989-7008 None:intergenic 15.0%
!!! TTCTTTTTAATCTTTATGTT+AGG - tig0020633:6990-7009 None:intergenic 15.0%
!! TAAAGATTAAAAAGAAAGTT+CGG + tig0020633:6994-7013 Msa1383960:CDS 15.0%
!!! GTAAATTATTTTATTTGACA+AGG - tig0020633:7118-7137 None:intergenic 15.0%
!! ACTAAAAAAAAATTCAAGAA+AGG - tig0020633:7479-7498 None:intergenic 15.0%
!! AAAAATAGACTAAAAACATT+CGG + tig0020633:7587-7606 Msa1383960:intron 15.0%
!! TTAGAAATAGACTAAAAAAA+TGG + tig0020633:7640-7659 Msa1383960:intron 15.0%
!! ATATTTCAAAACAAAATTGA+TGG + tig0020633:8309-8328 Msa1383960:intron 15.0%
!! AAAATCAAAAAGGATAATTA+CGG + tig0020633:8454-8473 Msa1383960:intron 15.0%
!!! TTTTATTTAATTATGTCACA+AGG - tig0020633:10315-10334 None:intergenic 15.0%
!!! AAGTAGTTTTATATTAATCA+AGG - tig0020633:10633-10652 None:intergenic 15.0%
!!! ATACCATCTTTTATAATTTT+GGG - tig0020633:11298-11317 None:intergenic 15.0%
!!! AATACCATCTTTTATAATTT+TGG - tig0020633:11299-11318 None:intergenic 15.0%
!!! ATTTTTTCAAAAGAACAATT+CGG - tig0020633:11761-11780 None:intergenic 15.0%
!!! GCATATTTTATTTATAAATC+TGG - tig0020633:12000-12019 None:intergenic 15.0%
!!! ATGAATTTAAAATTTTCCAT+TGG + tig0020633:12710-12729 Msa1383960:three_prime_UTR 15.0%
!!! ATTGTTTGAATTTGTTGTTT+CGG + tig0020633:5267-5286 Msa1383960:intron 20.0%
!!! AAATTTGTTTTCACTTCATT+TGG + tig0020633:5306-5325 Msa1383960:intron 20.0%
!!! TTCATTTGGATTAGTTAAAT+TGG + tig0020633:5320-5339 Msa1383960:intron 20.0%
!!! AGATTTGATTGAAAATTTTC+AGG + tig0020633:5379-5398 Msa1383960:intron 20.0%
!!! GATTTGATTGAAAATTTTCA+GGG + tig0020633:5380-5399 Msa1383960:intron 20.0%
!! TGATTTATATTGATGAATGA+AGG + tig0020633:5578-5597 Msa1383960:intron 20.0%
!! TTTAAAAAAAACGCAACATA+AGG - tig0020633:5773-5792 None:intergenic 20.0%
!! TTAAATGAGTAATCAAATCA+AGG + tig0020633:5788-5807 Msa1383960:intron 20.0%
!! GATAACACTATAAAGATTAA+AGG - tig0020633:7341-7360 None:intergenic 20.0%
!!! TCTGTATTGATAATAATCAA+TGG + tig0020633:7681-7700 Msa1383960:intron 20.0%
!! TATAATAATTACCATCTGAA+AGG - tig0020633:8581-8600 None:intergenic 20.0%
!! CTGTTACAACAATAAAAATA+GGG - tig0020633:8755-8774 None:intergenic 20.0%
!!! TTGACTCTACTTTTATTTTT+AGG + tig0020633:9653-9672 Msa1383960:intron 20.0%
!!! ATTTTCCTTTCAGATTTATT+TGG + tig0020633:10197-10216 Msa1383960:intron 20.0%
!! TGTGAAATCATTAATAGAAT+AGG - tig0020633:10453-10472 None:intergenic 20.0%
!!! AGTTTTATATTAATCAAGGA+TGG - tig0020633:10629-10648 None:intergenic 20.0%
!! TATAACATATATGTTCTCTT+TGG + tig0020633:10755-10774 Msa1383960:intron 20.0%
!! ATAACATATATGTTCTCTTT+GGG + tig0020633:10756-10775 Msa1383960:intron 20.0%
!!! ATCTTTTATAATTTTGGGTT+GGG - tig0020633:11293-11312 None:intergenic 20.0%
!! GGAAAAAATCTTAGAATATT+GGG - tig0020633:11584-11603 None:intergenic 20.0%
!! AGGAAAAAATCTTAGAATAT+TGG - tig0020633:11585-11604 None:intergenic 20.0%
!! TTCGATTTGAGAATTGAAAA+TGG - tig0020633:4932-4951 None:intergenic 25.0%
! AACAATGTCAGAAACTTTAA+TGG + tig0020633:4975-4994 Msa1383960:exon 25.0%
!!! AATTCGATTTTTCTCTGAAA+TGG - tig0020633:5033-5052 None:intergenic 25.0%
! ATCAAATCATCGACATAATA+TGG - tig0020633:5550-5569 None:intergenic 25.0%
! TGATGAATGAAGGAAATTTA+TGG + tig0020633:5588-5607 Msa1383960:intron 25.0%
! ATGAAAACAATTGTCAATAC+CGG - tig0020633:5880-5899 None:intergenic 25.0%
!!! GTATTGACAATTGTTTTCAT+GGG + tig0020633:5880-5899 Msa1383960:intron 25.0%
! AAAAAAAACTTATTGGTCGA+AGG - tig0020633:5915-5934 None:intergenic 25.0%
! AAAAATATAAGCCAAGAAGT+TGG - tig0020633:6037-6056 None:intergenic 25.0%
!! AACTTCTTGGCTTATATTTT+TGG + tig0020633:6036-6055 Msa1383960:intron 25.0%
!! ACTTCTTGGCTTATATTTTT+GGG + tig0020633:6037-6056 Msa1383960:intron 25.0%
!!! ACTTTTTCTAAGGTTTTTTG+AGG + tig0020633:6147-6166 Msa1383960:intron 25.0%
!! ATGCTTGATTTTGTTAGATA+AGG + tig0020633:6225-6244 Msa1383960:intron 25.0%
! AGTAACCAAGCTAATAAAAT+GGG - tig0020633:6348-6367 None:intergenic 25.0%
! AAGTAACCAAGCTAATAAAA+TGG - tig0020633:6349-6368 None:intergenic 25.0%
!! AGTTTAGTTCATAAGATCTT+TGG + tig0020633:6522-6541 Msa1383960:CDS 25.0%
! TCAAGACTTAAATCTAAGAA+CGG - tig0020633:6780-6799 None:intergenic 25.0%
!!! TAGTCTATTTCTAATAACCA+AGG + tig0020633:7495-7514 Msa1383960:intron 25.0%
! TAATAACCAAGGACTAAAAA+AGG + tig0020633:7506-7525 Msa1383960:intron 25.0%
! AATAACCAAGGACTAAAAAA+GGG + tig0020633:7507-7526 Msa1383960:intron 25.0%
!!! AGTCTATTTCTAATAACCAA+TGG - tig0020633:7496-7515 None:intergenic 25.0%
! TAGGTAGAAATTGAAAAAGA+GGG - tig0020633:7874-7893 None:intergenic 25.0%
!! TTAGATGAAGTGTCAAAAAA+GGG - tig0020633:7982-8001 None:intergenic 25.0%
!! TTTAGATGAAGTGTCAAAAA+AGG - tig0020633:7983-8002 None:intergenic 25.0%
! TGAAGTTGAAGTAAGATTAA+TGG + tig0020633:8127-8146 Msa1383960:intron 25.0%
! ATCATTTGCTTCACTTAAAT+CGG - tig0020633:8402-8421 None:intergenic 25.0%
! GCAAATGATACTAAATTGAT+AGG + tig0020633:8413-8432 Msa1383960:intron 25.0%
!!! CGGTTTTTAAAGTAATGTAA+GGG - tig0020633:8625-8644 None:intergenic 25.0%
!! CCTTACATTACTTTAAAAAC+CGG + tig0020633:8623-8642 Msa1383960:intron 25.0%
! GACTTAAAAATTTAGACATG+TGG + tig0020633:8658-8677 Msa1383960:intron 25.0%
! CCTGTTACAACAATAAAAAT+AGG - tig0020633:8756-8775 None:intergenic 25.0%
!!! CCTATTTTTATTGTTGTAAC+AGG + tig0020633:8753-8772 Msa1383960:intron 25.0%
!!! ATAAAAAAAGTATTGCTCCA+AGG + tig0020633:8839-8858 Msa1383960:CDS 25.0%
! ATTTCAAAGACTAATGTTAC+TGG + tig0020633:8889-8908 Msa1383960:CDS 25.0%
!!! ATGTGGAAAATAAGTTTTGT+GGG + tig0020633:8965-8984 Msa1383960:CDS 25.0%
!!! ATGATCAACAAATTTTGGTT+GGG - tig0020633:9589-9608 None:intergenic 25.0%
!!! TATGATCAACAAATTTTGGT+TGG - tig0020633:9590-9609 None:intergenic 25.0%
!! GTGATATGATCAACAAATTT+TGG - tig0020633:9594-9613 None:intergenic 25.0%
!!! CTCTACTTTTATTTTTAGGT+TGG + tig0020633:9657-9676 Msa1383960:intron 25.0%
! TCTTGTAGTGTTTAATTGTT+TGG + tig0020633:10410-10429 Msa1383960:intron 25.0%
!!! CTCAATATATATGGTTTTGT+TGG + tig0020633:10883-10902 Msa1383960:intron 25.0%
!!! CATCTTTTATAATTTTGGGT+TGG - tig0020633:11294-11313 None:intergenic 25.0%
! CAACCCAAAATTATAAAAGA+TGG + tig0020633:11292-11311 Msa1383960:intron 25.0%
! AAGCTTAATAAGCAATATAG+AGG - tig0020633:11527-11546 None:intergenic 25.0%
! CTATATTGCTTATTAAGCTT+TGG + tig0020633:11527-11546 Msa1383960:intron 25.0%
!!! GATTTTTTCCTTGTTTACTA+TGG + tig0020633:11594-11613 Msa1383960:intron 25.0%
! AATAACTTCCATAGTAAACA+AGG - tig0020633:11605-11624 None:intergenic 25.0%
!! TTTTTGTCTAAGAATCATTC+TGG + tig0020633:11685-11704 Msa1383960:intron 25.0%
! GCGATTTCTTGAAAAATATT+TGG - tig0020633:12231-12250 None:intergenic 25.0%
!!! CCTTTTTAACTTAGATTTCT+CGG - tig0020633:12256-12275 None:intergenic 25.0%
! CGAGAAATCTAAGTTAAAAA+GGG + tig0020633:12254-12273 Msa1383960:CDS 25.0%
! TTAAGTTATATTCTGAATGG+AGG - tig0020633:12309-12328 None:intergenic 25.0%
! GAGTTAAGTTATATTCTGAA+TGG - tig0020633:12312-12331 None:intergenic 25.0%
!! TTTTTGTACCTTCTATGAAT+CGG + tig0020633:12616-12635 Msa1383960:three_prime_UTR 25.0%
! AAATTACGTAAGATATCCAA+TGG - tig0020633:12729-12748 None:intergenic 25.0%
!!! TAGCGTTTGTTTTTTCTTTG+CGG + tig0020633:4795-4814 Msa1383960:five_prime_UTR 30.0%
!! GTGTTGTTTGGTAATAGTTT+CGG - tig0020633:5007-5026 None:intergenic 30.0%
!!! CCTTTGAATGGTTTTTTAAC+AGG - tig0020633:5060-5079 None:intergenic 30.0%
CCTGTTAAAAAACCATTCAA+AGG + tig0020633:5057-5076 Msa1383960:CDS 30.0%
!! AATTCAGAATTTTTGGAAGG+TGG - tig0020633:5171-5190 None:intergenic 30.0%
!! GAGAATTCAGAATTTTTGGA+AGG - tig0020633:5174-5193 None:intergenic 30.0%
!!! GGTATTGACAATTGTTTTCA+TGG + tig0020633:5879-5898 Msa1383960:intron 30.0%
! TCAGCTCAGTTTCTTTTAAA+CGG + tig0020633:6087-6106 Msa1383960:intron 30.0%
ATATGCCTAATCTTATGTCA+AGG - tig0020633:6377-6396 None:intergenic 30.0%
TTAGTTCATAAGATCTTTGG+TGG + tig0020633:6525-6544 Msa1383960:CDS 30.0%
! TACTTGTTTCTTGATTCGAT+GGG + tig0020633:6565-6584 Msa1383960:intron 30.0%
! TTGATATTTAAGGCATTACC+TGG + tig0020633:6635-6654 Msa1383960:intron 30.0%
! TGATATTTAAGGCATTACCT+GGG + tig0020633:6636-6655 Msa1383960:intron 30.0%
!!! AAGAGTATCTTTTGACTTCA+TGG + tig0020633:6673-6692 Msa1383960:intron 30.0%
TAAGAACGGATCAAATTTGT+TGG - tig0020633:6766-6785 None:intergenic 30.0%
CAAACAGCTAACAATTCATA+AGG + tig0020633:6917-6936 Msa1383960:CDS 30.0%
AAATGAATTGCTAGCACATA+AGG - tig0020633:6945-6964 None:intergenic 30.0%
! GTTTTGCAAGTAAAGAAAGT+GGG - tig0020633:7096-7115 None:intergenic 30.0%
GATGTGAAATACTCGTTATA+CGG + tig0020633:7197-7216 Msa1383960:CDS 30.0%
ATGTGAAATACTCGTTATAC+GGG + tig0020633:7198-7217 Msa1383960:CDS 30.0%
AAATAACATGTGGTATACCT+TGG + tig0020633:7283-7302 Msa1383960:CDS 30.0%
AAAAATCAGTTAGCGTTATC+TGG + tig0020633:7408-7427 Msa1383960:intron 30.0%
AGAACATTCATCAATACCAA+TGG - tig0020633:7547-7566 None:intergenic 30.0%
GTAGGTAGAAATTGAAAAAG+AGG - tig0020633:7875-7894 None:intergenic 30.0%
TTCAATTTCTACCTACTAAC+CGG + tig0020633:7879-7898 Msa1383960:intron 30.0%
! TAGATGAAGTGTCAAAAAAG+GGG - tig0020633:7981-8000 None:intergenic 30.0%
AACATCTTTCTCCATTATTG+TGG + tig0020633:8160-8179 Msa1383960:intron 30.0%
!!! GCATCACTTCAATTTTTTCT+GGG - tig0020633:8287-8306 None:intergenic 30.0%
!!! AGCATCACTTCAATTTTTTC+TGG - tig0020633:8288-8307 None:intergenic 30.0%
!!! CCGGTTTTTAAAGTAATGTA+AGG - tig0020633:8626-8645 None:intergenic 30.0%
! TTATTTTCCACATGACCATT+TGG - tig0020633:8958-8977 None:intergenic 30.0%
! CATGTGGAAAATAAGTTTTG+TGG + tig0020633:8964-8983 Msa1383960:CDS 30.0%
!! TGTGGAAAATAAGTTTTGTG+GGG + tig0020633:8966-8985 Msa1383960:CDS 30.0%
TTCACATATGATATCCTTGA+TGG - tig0020633:9036-9055 None:intergenic 30.0%
ATCAAGGATATCATATGTGA+AGG + tig0020633:9035-9054 Msa1383960:CDS 30.0%
TTTATCTAAACGTACTTCCA+AGG + tig0020633:9119-9138 Msa1383960:CDS 30.0%
!! TGAGGATACACTTTTAAAAG+AGG + tig0020633:9293-9312 Msa1383960:CDS 30.0%
!! GAGGATACACTTTTAAAAGA+GGG + tig0020633:9294-9313 Msa1383960:CDS 30.0%
ATGTTTACCAGTAACTGTTT+GGG - tig0020633:9358-9377 None:intergenic 30.0%
AAATATGTCAGTATCCTCTT+TGG + tig0020633:9420-9439 Msa1383960:intron 30.0%
GTCAATACACCAATACAATA+AGG - tig0020633:9638-9657 None:intergenic 30.0%
!!! TTTTAGGTTGGAACTTCAAA+TGG + tig0020633:9669-9688 Msa1383960:intron 30.0%
AAAGAAGTTTCCAAAGTACA+AGG + tig0020633:9800-9819 Msa1383960:CDS 30.0%
AAGAAGTTTCCAAAGTACAA+GGG + tig0020633:9801-9820 Msa1383960:CDS 30.0%
AGATTATAAACAGGATGGAT+CGG + tig0020633:10036-10055 Msa1383960:CDS 30.0%
TATCATCTTGTAGACTACAT+CGG - tig0020633:10106-10125 None:intergenic 30.0%
TAGTCTACAAGATGATAAGA+GGG + tig0020633:10109-10128 Msa1383960:CDS 30.0%
ATATTGACACAAACTCTATG+TGG - tig0020633:10227-10246 None:intergenic 30.0%
! ATTGTTTGGTTTAATGTCTC+TGG + tig0020633:10424-10443 Msa1383960:intron 30.0%
AATGGTGAGCTCAATATATA+TGG + tig0020633:10874-10893 Msa1383960:intron 30.0%
TGAAATTGTACTTGGCTTAT+TGG + tig0020633:11832-11851 Msa1383960:intron 30.0%
GTTTGAAAGATGTTGAATGT+TGG + tig0020633:11912-11931 Msa1383960:intron 30.0%
CCGAGAAATCTAAGTTAAAA+AGG + tig0020633:12253-12272 Msa1383960:CDS 30.0%
ATATAACTTAACTCCAACTC+TGG + tig0020633:12318-12337 Msa1383960:exon 30.0%
TATAACTTAACTCCAACTCT+GGG + tig0020633:12319-12338 Msa1383960:exon 30.0%
!! ATTATTGATTTGCCAAACAC+TGG + tig0020633:12355-12374 Msa1383960:three_prime_UTR 30.0%
! GGTTTATTGTCTTTTATGCA+CGG + tig0020633:12440-12459 Msa1383960:three_prime_UTR 30.0%
! GTTTATTGTCTTTTATGCAC+GGG + tig0020633:12441-12460 Msa1383960:three_prime_UTR 30.0%
TGAATTGAGAAATGTGCTAA+GGG - tig0020633:12471-12490 None:intergenic 30.0%
ATGAATTGAGAAATGTGCTA+AGG - tig0020633:12472-12491 None:intergenic 30.0%
!! TTCAATTACCGATTCATAGA+AGG - tig0020633:12627-12646 None:intergenic 30.0%
TTCTATGAATCGGTAATTGA+AGG + tig0020633:12626-12645 Msa1383960:three_prime_UTR 30.0%
TCATTGGAAAAGCCTTTGAA+TGG - tig0020633:5072-5091 None:intergenic 35.0%
GGTTTCGATGTGAAAATCAT+TGG - tig0020633:5088-5107 None:intergenic 35.0%
TATTAGCGGAAACAAGTTGT+CGG - tig0020633:5134-5153 None:intergenic 35.0%
CTGCGATGATTGAATATTAG+CGG - tig0020633:5148-5167 None:intergenic 35.0%
! CTCGGAGAATTCAGAATTTT+TGG - tig0020633:5178-5197 None:intergenic 35.0%
AATTCTGAATTCTCCGAGTT+TGG + tig0020633:5180-5199 Msa1383960:CDS 35.0%
!! ATTGAAAATTTTCAGGGTGC+TGG + tig0020633:5386-5405 Msa1383960:intron 35.0%
!! TTGAAAATTTTCAGGGTGCT+GGG + tig0020633:5387-5406 Msa1383960:intron 35.0%
ATATTTATAGGCCACATTGC+TGG + tig0020633:5645-5664 Msa1383960:intron 35.0%
AATATTATCGCCACAGGATA+TGG + tig0020633:5728-5747 Msa1383960:CDS 35.0%
GCATTTATTACGTTGAGTCA+AGG + tig0020633:5847-5866 Msa1383960:intron 35.0%
TTACGTTGAGTCAAGGAAAA+TGG + tig0020633:5854-5873 Msa1383960:intron 35.0%
AGATCTTCTGCAAGATAATG+TGG - tig0020633:5952-5971 None:intergenic 35.0%
!!! TGCTGTCTGTTTTTGAAACA+AGG + tig0020633:5997-6016 Msa1383960:intron 35.0%
AAAAGAAACTGAGCTGAAAG+AGG - tig0020633:6084-6103 None:intergenic 35.0%
! CAGCTCAGTTTCTTTTAAAC+GGG + tig0020633:6088-6107 Msa1383960:intron 35.0%
TCCTGCTGTAATATCTAGAA+CGG + tig0020633:6194-6213 Msa1383960:intron 35.0%
!! TTAATCATGTGCTGATTGCT+TGG + tig0020633:6267-6286 Msa1383960:intron 35.0%
AAGTGCTTCTAGCAAAAAAC+GGG - tig0020633:6325-6344 None:intergenic 35.0%
! GAAGTGCTTCTAGCAAAAAA+CGG - tig0020633:6326-6345 None:intergenic 35.0%
! CACTTCCCATTTTATTAGCT+TGG + tig0020633:6340-6359 Msa1383960:intron 35.0%
GTACTCCTTGACATAAGATT+AGG + tig0020633:6369-6388 Msa1383960:intron 35.0%
! GTACTTGTTTCTTGATTCGA+TGG + tig0020633:6564-6583 Msa1383960:intron 35.0%
CTTGTTCTATAAAGATTCCC+AGG - tig0020633:6656-6675 None:intergenic 35.0%
ACAACACCTCAAAAGTTTGT+TGG + tig0020633:6699-6718 Msa1383960:intron 35.0%
! CAACACCTCAAAAGTTTGTT+GGG + tig0020633:6700-6719 Msa1383960:intron 35.0%
AAAGGCAGATTCACTACAAA+AGG + tig0020633:6806-6825 Msa1383960:CDS 35.0%
TCTTTATGTTAGGGTCATGA+GGG - tig0020633:6980-6999 None:intergenic 35.0%
ATCTTTATGTTAGGGTCATG+AGG - tig0020633:6981-7000 None:intergenic 35.0%
GAAAGGTTTCAAATTCAGTG+CGG - tig0020633:7027-7046 None:intergenic 35.0%
! AATTTGAAACCTTTCGTCAG+CGG + tig0020633:7032-7051 Msa1383960:CDS 35.0%
! GGTTTTGCAAGTAAAGAAAG+TGG - tig0020633:7097-7116 None:intergenic 35.0%
TGTGAAATACTCGTTATACG+GGG + tig0020633:7199-7218 Msa1383960:CDS 35.0%
TACTAAAACCAGAATGAACC+AGG - tig0020633:7226-7245 None:intergenic 35.0%
! ACCACATGTTATTTGAAGTG+CGG - tig0020633:7277-7296 None:intergenic 35.0%
! TTAACGTATTTTCAGTACCC+GGG - tig0020633:7315-7334 None:intergenic 35.0%
! GTTAACGTATTTTCAGTACC+CGG - tig0020633:7316-7335 None:intergenic 35.0%
!! AACGCTAACTGATTTTTCTC+AGG - tig0020633:7405-7424 None:intergenic 35.0%
TTCTCTTCATTTATAAGCCC+CGG - tig0020633:7434-7453 None:intergenic 35.0%
!! TGGTATTGATGAATGTTCTG+TGG + tig0020633:7548-7567 Msa1383960:intron 35.0%
TATTGATGAATGTTCTGTGG+AGG + tig0020633:7551-7570 Msa1383960:intron 35.0%
ACTAAAAACATTCGGACTTG+AGG + tig0020633:7595-7614 Msa1383960:intron 35.0%
CCACAGAACATTCATCAATA+CGG - tig0020633:7551-7570 None:intergenic 35.0%
TATTGATGAATGTTCTGTGG+AGG + tig0020633:7551-7570 Msa1383960:intron 35.0%
TTTATGTCACAGCTGAAGTA+GGG - tig0020633:7765-7784 None:intergenic 35.0%
! TTTTATGTCACAGCTGAAGT+AGG - tig0020633:7766-7785 None:intergenic 35.0%
! AATCAATCTAGAGCAATGCT+AGG + tig0020633:7792-7811 Msa1383960:intron 35.0%
! ATCAATCTAGAGCAATGCTA+GGG + tig0020633:7793-7812 Msa1383960:intron 35.0%
ACAAACACTCTCTCAATCTA+TGG + tig0020633:7838-7857 Msa1383960:intron 35.0%
AATTGAAAAAGAGGGAAACG+TGG - tig0020633:7866-7885 None:intergenic 35.0%
! AGATGAAGTGTCAAAAAAGG+GGG - tig0020633:7980-7999 None:intergenic 35.0%
ACACTTCATCTAAACAACCA+CGG + tig0020633:7989-8008 Msa1383960:intron 35.0%
TAGATCGAGAACCACAATAA+TGG - tig0020633:8174-8193 None:intergenic 35.0%
TGGTTCTCGATCTACTTTAA+TGG + tig0020633:8180-8199 Msa1383960:intron 35.0%
TCCACCACAAACAAAGAATT+TGG - tig0020633:8219-8238 None:intergenic 35.0%
!!! CAATTTTTTCTGGGTTGTAC+TGG - tig0020633:8278-8297 None:intergenic 35.0%
! TGGCTTTTGTGTATGGAAAA+AGG - tig0020633:8511-8530 None:intergenic 35.0%
! ATCTCAATGGCTTTTGTGTA+TGG - tig0020633:8518-8537 None:intergenic 35.0%
TAAAAACCGGTAAACAAGTG+AGG + tig0020633:8636-8655 Msa1383960:intron 35.0%
TTAAGTCCTCACTTGTTTAC+CGG - tig0020633:8645-8664 None:intergenic 35.0%
TAGATTGATGAGCAATGCTA+TGG - tig0020633:8731-8750 None:intergenic 35.0%
TTGTAACAGGTAAGTCATGT+CGG + tig0020633:8766-8785 Msa1383960:intron 35.0%
TCTTCCTTAGCGATATTAAC+AGG - tig0020633:8868-8887 None:intergenic 35.0%
!! AATCTTTCAGTGCATTGGTT+GGG - tig0020633:8933-8952 None:intergenic 35.0%
! TAATCTTTCAGTGCATTGGT+TGG - tig0020633:8934-8953 None:intergenic 35.0%
TGGATAATCTTTCAGTGCAT+TGG - tig0020633:8938-8957 None:intergenic 35.0%
GCACTGAAAGATTATCCAAA+TGG + tig0020633:8940-8959 Msa1383960:CDS 35.0%
AGATTATCCAAATGGTCATG+TGG + tig0020633:8948-8967 Msa1383960:CDS 35.0%
TGTTAAATGCTGATCCATCA+AGG + tig0020633:9019-9038 Msa1383960:CDS 35.0%
CTGGTTCAGCAAAATAATAG+TGG + tig0020633:9063-9082 Msa1383960:CDS 35.0%
ATTCATCTGTGTAAGTTCCT+TGG - tig0020633:9139-9158 None:intergenic 35.0%
! CAAGTTCTGATTTAGCAACA+GGG - tig0020633:9176-9195 None:intergenic 35.0%
! TCAAGTTCTGATTTAGCAAC+AGG - tig0020633:9177-9196 None:intergenic 35.0%
TTATCATCCTTAGATCACTC+TGG + tig0020633:9201-9220 Msa1383960:CDS 35.0%
CAAACCTAATCTGTTTACTG+AGG + tig0020633:9275-9294 Msa1383960:CDS 35.0%
GTATCCTCAGTAAACAGATT+AGG - tig0020633:9282-9301 None:intergenic 35.0%
TGTTTACCAGTAACTGTTTG+GGG - tig0020633:9357-9376 None:intergenic 35.0%
CATGTTTACCAGTAACTGTT+TGG - tig0020633:9359-9378 None:intergenic 35.0%
GTTGGGTTACTGAAATTACA+AGG - tig0020633:9572-9591 None:intergenic 35.0%
ACAATAAGGCCCCAATATAT+GGG - tig0020633:9624-9643 None:intergenic 35.0%
TACAATAAGGCCCCAATATA+TGG - tig0020633:9625-9644 None:intergenic 35.0%
!! ATATTGGGGCCTTATTGTAT+TGG + tig0020633:9626-9645 Msa1383960:intron 35.0%
ATCAAGAGTTGAGTCTTTCA+AGG - tig0020633:9757-9776 None:intergenic 35.0%
ATGATTGATCCCTTGTACTT+TGG - tig0020633:9813-9832 None:intergenic 35.0%
! TTTTTGTGATTCTTCTTCCG+CGG - tig0020633:9876-9895 None:intergenic 35.0%
AAAAAATAGACGCTGCTTGT+TGG + tig0020633:9893-9912 Msa1383960:CDS 35.0%
AAAAATAGACGCTGCTTGTT+GGG + tig0020633:9894-9913 Msa1383960:CDS 35.0%
! AGAACGTAAATGGTCTTTTC+CGG - tig0020633:9988-10007 None:intergenic 35.0%
TCATCAGAGAAGAACGTAAA+TGG - tig0020633:9998-10017 None:intergenic 35.0%
CTGAAGGAGAGATTATAAAC+AGG + tig0020633:10027-10046 Msa1383960:CDS 35.0%
AGGAGAGATTATAAACAGGA+TGG + tig0020633:10031-10050 Msa1383960:CDS 35.0%
ATCATCTTGTAGACTACATC+GGG - tig0020633:10105-10124 None:intergenic 35.0%
GTAGTCTACAAGATGATAAG+AGG + tig0020633:10108-10127 Msa1383960:CDS 35.0%
GTGTGCCAAATAAATCTGAA+AGG - tig0020633:10205-10224 None:intergenic 35.0%
TTGCTAATTGCCAAATTCCT+TGG + tig0020633:10476-10495 Msa1383960:intron 35.0%
TGCTAATTGCCAAATTCCTT+GGG + tig0020633:10477-10496 Msa1383960:intron 35.0%
!! CCATTTTAACCCAAGGAATT+TGG - tig0020633:10489-10508 None:intergenic 35.0%
CCAAATTCCTTGGGTTAAAA+TGG + tig0020633:10486-10505 Msa1383960:intron 35.0%
!! AATAGCACCATTTTAACCCA+AGG - tig0020633:10496-10515 None:intergenic 35.0%
ACCACACAAAAAGTAGTATC+TGG + tig0020633:10519-10538 Msa1383960:intron 35.0%
!!! ACCAGATACTACTTTTTGTG+TGG - tig0020633:10523-10542 None:intergenic 35.0%
CTGAACTGAACTCTGAATAT+TGG + tig0020633:10715-10734 Msa1383960:intron 35.0%
!! TTCATTGTGTTGGTTGTGAA+GGG + tig0020633:10984-11003 Msa1383960:intron 35.0%
TGTGTAGTGCTTATAAAGCT+TGG + tig0020633:11043-11062 Msa1383960:intron 35.0%
GTGTAGTGCTTATAAAGCTT+GGG + tig0020633:11044-11063 Msa1383960:intron 35.0%
!! TTCATTGTGTTGGTTGTGAA+GGG + tig0020633:10984-11003 Msa1383960:intron 35.0%
TGTGTAGTGCTTATAAAGCT+TGG + tig0020633:11043-11062 Msa1383960:intron 35.0%
GTGTAGTGCTTATAAAGCTT+GGG + tig0020633:11044-11063 Msa1383960:intron 35.0%
! AAAACTTGCTTGTAAGGTGA+GGG - tig0020633:11254-11273 None:intergenic 35.0%
GCAACTTAAAACCGCAATTA+GGG - tig0020633:11431-11450 None:intergenic 35.0%
TCTAAGAATCATTCTGGATC+CGG + tig0020633:11691-11710 Msa1383960:intron 35.0%
GATACGCTATTGATGTGTAT+CGG + tig0020633:11727-11746 Msa1383960:intron 35.0%
! GCTGAATCTGAAATTGTACT+TGG + tig0020633:11824-11843 Msa1383960:intron 35.0%
ATCTTGACACCTCAATTTAC+AGG + tig0020633:12142-12161 Msa1383960:intron 35.0%
TCTTGACACCTCAATTTACA+GGG + tig0020633:12143-12162 Msa1383960:intron 35.0%
CAGGAAAGAGAAAGAAGTTA+AGG + tig0020633:12181-12200 Msa1383960:CDS 35.0%
TTCAAAACATCTCCAGTGTT+TGG - tig0020633:12370-12389 None:intergenic 35.0%
!!! AGAGAGCACCTAAATTTTGT+TGG + tig0020633:12389-12408 Msa1383960:three_prime_UTR 35.0%
TGAAGCAGCCAACAAAATTT+AGG - tig0020633:12400-12419 None:intergenic 35.0%
GAATTGAGAAATGTGCTAAG+GGG - tig0020633:12470-12489 None:intergenic 35.0%
!!! TTTTTTCTTTGCGGCAGTGT+AGG + tig0020633:4804-4823 Msa1383960:five_prime_UTR 40.0%
! TTTTTCTTTGCGGCAGTGTA+GGG + tig0020633:4805-4824 Msa1383960:five_prime_UTR 40.0%
GAAGAAATGAGTGTGCATTG+TGG - tig0020633:4842-4861 None:intergenic 40.0%
! CTGAAATGGATCGTGTTGTT+TGG - tig0020633:5019-5038 None:intergenic 40.0%
TGAATTCTCCGAGTTTGGTT+TGG + tig0020633:5185-5204 Msa1383960:CDS 40.0%
AACACTCACTATTCTGCGAA+AGG - tig0020633:5235-5254 None:intergenic 40.0%
CTTTGCAGATATGCAGCTAA+GGG - tig0020633:5476-5495 None:intergenic 40.0%
ACTTTGCAGATATGCAGCTA+AGG - tig0020633:5477-5496 None:intergenic 40.0%
TTAGCTGCATATCTGCAAAG+TGG + tig0020633:5476-5495 Msa1383960:CDS 40.0%
AGATTTCCAACCATATCCTG+TGG - tig0020633:5741-5760 None:intergenic 40.0%
AGGATATGGTTGGAAATCTG+CGG + tig0020633:5742-5761 Msa1383960:CDS 40.0%
TGCAAGATAATGTGGACATG+CGG - tig0020633:5944-5963 None:intergenic 40.0%
TAAGCCTAGAACCAACTTCT+TGG + tig0020633:6023-6042 Msa1383960:intron 40.0%
! TAAGCCAAGAAGTTGGTTCT+AGG - tig0020633:6030-6049 None:intergenic 40.0%
! ACCGTTCTAGATATTACAGC+AGG - tig0020633:6198-6217 None:intergenic 40.0%
AGTGCTTCTAGCAAAAAACG+GGG - tig0020633:6324-6343 None:intergenic 40.0%
CATATCACGCAATTTCCGAA+AGG + tig0020633:6392-6411 Msa1383960:CDS 40.0%
GGAAGATGCACATGAGTATA+TGG + tig0020633:6422-6441 Msa1383960:CDS 40.0%
!!! AAACTTTTCTCGAAAGCACC+AGG - tig0020633:6507-6526 None:intergenic 40.0%
! AAGCACCCAACAAACTTTTG+AGG - tig0020633:6708-6727 None:intergenic 40.0%
!!! GTTTGTTGGGTGCTTTTTTC+AGG + tig0020633:6713-6732 Msa1383960:intron 40.0%
!! GAACGGATCAAATTTGTTGG+AGG - tig0020633:6763-6782 None:intergenic 40.0%
! TTTCACAGCTGCAGAACTTT+TGG + tig0020633:6839-6858 Msa1383960:CDS 40.0%
!! ACTTTCAAGTTTCTCCCGTT+TGG + tig0020633:7165-7184 Msa1383960:intron 40.0%
!!! TCTGGTTTTAGTACTCACTC+TGG + tig0020633:7233-7252 Msa1383960:CDS 40.0%
TCCGCACTTCAAATAACATG+TGG + tig0020633:7273-7292 Msa1383960:CDS 40.0%
AACCAAGGACTAAAAAAGGG+TGG + tig0020633:7510-7529 Msa1383960:intron 40.0%
!!! TTCCACCCTTTTTTAGTCCT+TGG - tig0020633:7515-7534 None:intergenic 40.0%
ATGAATGTTCTGTGGAGGAA+TGG + tig0020633:7556-7575 Msa1383960:intron 40.0%
AAAACATTCGGACTTGAGGT+TGG + tig0020633:7599-7618 Msa1383960:intron 40.0%
! CCGTATTGATGAATGTTCTG+TGG + tig0020633:7707-7726 Msa1383960:intron 40.0%
ATGAATGTTCTGTGGAGGAA+TGG + tig0020633:7556-7575 Msa1383960:intron 40.0%
GTTTCTTAAAACCAGACCCT+AGG + tig0020633:7737-7756 Msa1383960:intron 40.0%
CAAACAAAGAATTTGGCTGG+CGG - tig0020633:8212-8231 None:intergenic 40.0%
CCACAAACAAAGAATTTGGC+TGG - tig0020633:8215-8234 None:intergenic 40.0%
! CCAGCCAAATTCTTTGTTTG+TGG + tig0020633:8212-8231 Msa1383960:intron 40.0%
! GCCAAATTCTTTGTTTGTGG+TGG + tig0020633:8215-8234 Msa1383960:intron 40.0%
!! TTTTTCTGGGTTGTACTGGT+GGG - tig0020633:8274-8293 None:intergenic 40.0%
!!! TTTTTTCTGGGTTGTACTGG+TGG - tig0020633:8275-8294 None:intergenic 40.0%
GACTTGTCAGTTGTCATCAT+CGG - tig0020633:8380-8399 None:intergenic 40.0%
ACGGAAGTGAGATTTGTACA+TGG + tig0020633:8473-8492 Msa1383960:intron 40.0%
GAAGTGAGATTTGTACATGG+CGG + tig0020633:8476-8495 Msa1383960:intron 40.0%
GAAGCCTGTTAATATCGCTA+AGG + tig0020633:8861-8880 Msa1383960:CDS 40.0%
!! ATCTTTCAGTGCATTGGTTG+GGG - tig0020633:8932-8951 None:intergenic 40.0%
TTCTGAGTTTCTGCAGTCAA+AGG - tig0020633:8994-9013 None:intergenic 40.0%
ATCATATGTGAAGGATGCTC+TGG + tig0020633:9044-9063 Msa1383960:CDS 40.0%
! GTCTTTTCCAGAGTGATCTA+AGG - tig0020633:9211-9230 None:intergenic 40.0%
! TCACTCTGGAAAAGACAATG+TGG + tig0020633:9215-9234 Msa1383960:CDS 40.0%
AAATGTTTAGTTGCACCAGC+TGG + tig0020633:9249-9268 Msa1383960:CDS 40.0%
! CTGACGATTGGCTCAATTAA+AGG - tig0020633:9330-9349 None:intergenic 40.0%
AGTAATCCCCAAACAGTTAC+TGG + tig0020633:9348-9367 Msa1383960:CDS 40.0%
GAAACACTTACCTCATCAGA+CGG - tig0020633:9399-9418 None:intergenic 40.0%
GTATCCTCTTTGGACAAAAC+TGG + tig0020633:9430-9449 Msa1383960:intron 40.0%
TCACCTGTTTGCCCATATAT+TGG + tig0020633:9610-9629 Msa1383960:intron 40.0%
CACCTGTTTGCCCATATATT+GGG + tig0020633:9611-9630 Msa1383960:intron 40.0%
ACCTGTTTGCCCATATATTG+GGG + tig0020633:9612-9631 Msa1383960:intron 40.0%
GGTTGGAACTTCAAATGGTT+TGG + tig0020633:9674-9693 Msa1383960:intron 40.0%
! TTTTGTGATTCTTCTTCCGC+GGG - tig0020633:9875-9894 None:intergenic 40.0%
! CTTGCCATTTCATCAGATGT+TGG + tig0020633:9951-9970 Msa1383960:CDS 40.0%
TGGTCCAACATCTGATGAAA+TGG - tig0020633:9958-9977 None:intergenic 40.0%
GATGTTGGACCATCTATATC+CGG + tig0020633:9966-9985 Msa1383960:CDS 40.0%
! TGGTCTTTTCCGGATATAGA+TGG - tig0020633:9978-9997 None:intergenic 40.0%
CATAATACTGTTGTGACTCG+AGG + tig0020633:10140-10159 Msa1383960:CDS 40.0%
ATTGCTCGCATTGGATATGT+TGG + tig0020633:10846-10865 Msa1383960:intron 40.0%
TTGCTCGCATTGGATATGTT+GGG + tig0020633:10847-10866 Msa1383960:intron 40.0%
TTGGATATGTTGGGGATGAA+TGG + tig0020633:10856-10875 Msa1383960:intron 40.0%
! TGGAAGTTTCACATCGATTG+TGG + tig0020633:10903-10922 Msa1383960:intron 40.0%
AACACAAAAGCCACATTAGG+CGG - tig0020633:10940-10959 None:intergenic 40.0%
AGCAACACAAAAGCCACATT+AGG - tig0020633:10943-10962 None:intergenic 40.0%
! AACCAACACAATGAAGGTGT+TGG - tig0020633:10979-10998 None:intergenic 40.0%
CTTCACAACCAACACAATGA+AGG - tig0020633:10985-11004 None:intergenic 40.0%
!! CTTCATTGTGTTGGTTGTGA+AGG + tig0020633:10983-11002 Msa1383960:intron 40.0%
GAACTTCCAACAAAAGGTGA+GGG - tig0020633:11073-11092 None:intergenic 40.0%
GATGTGGAACTTCCAACAAA+AGG - tig0020633:11079-11098 None:intergenic 40.0%
AACACAAAAGCCACATTAGG+CGG - tig0020633:10940-10959 None:intergenic 40.0%
AGCAACACAAAAGCCACATT+AGG - tig0020633:10943-10962 None:intergenic 40.0%
! AACCAACACAATGAAGGTGT+TGG - tig0020633:10979-10998 None:intergenic 40.0%
CTTCACAACCAACACAATGA+AGG - tig0020633:10985-11004 None:intergenic 40.0%
!! CTTCATTGTGTTGGTTGTGA+AGG + tig0020633:10983-11002 Msa1383960:intron 40.0%
! CAAAACTTGCTTGTAAGGTG+AGG - tig0020633:11255-11274 None:intergenic 40.0%
!! GCCTATCCTAGATTTGTTGT+TGG + tig0020633:11322-11341 Msa1383960:intron 40.0%
! GCCAACAACAAATCTAGGAT+AGG - tig0020633:11326-11345 None:intergenic 40.0%
GTAAGGCCAACAACAAATCT+AGG - tig0020633:11331-11350 None:intergenic 40.0%
!! AAAGCATGGATGATGGAGTA+AGG - tig0020633:11348-11367 None:intergenic 40.0%
TACTCCATCATCCATGCTTT+AGG + tig0020633:11348-11367 Msa1383960:intron 40.0%
! ATCCATGCTTTAGGCTCATT+GGG + tig0020633:11357-11376 Msa1383960:intron 40.0%
GGCAACTTAAAACCGCAATT+AGG - tig0020633:11432-11451 None:intergenic 40.0%
TTTAGTCCCACATTGCGATA+TGG + tig0020633:11501-11520 Msa1383960:intron 40.0%
TATCAGTACTTCGACTACAC+AGG - tig0020633:11660-11679 None:intergenic 40.0%
CGTATCTCAACATATCACTC+CGG - tig0020633:11713-11732 None:intergenic 40.0%
TAAAAATGCGTCCAGCATGT+CGG + tig0020633:11785-11804 Msa1383960:intron 40.0%
CAGAAAGATGCATTGCCTAA+TGG - tig0020633:11963-11982 None:intergenic 40.0%
TTCCTCATCCCTGTAAATTG+AGG - tig0020633:12154-12173 None:intergenic 40.0%
!! AGGTGTTTGAAGCAGAGTTT+TGG + tig0020633:12201-12220 Msa1383960:CDS 40.0%
!! TGTTTGAAGCAGAGTTTTGG+TGG + tig0020633:12204-12223 Msa1383960:CDS 40.0%
!! GTTTGAAGCAGAGTTTTGGT+GGG + tig0020633:12205-12224 Msa1383960:CDS 40.0%
TTCTGAATGGAGGATTTCTG+AGG - tig0020633:12299-12318 None:intergenic 40.0%
GTTACAAAGAAACCCAGAGT+TGG - tig0020633:12334-12353 None:intergenic 40.0%
!! TTTTGTTGGCTGCTTCATGT+TGG + tig0020633:12403-12422 Msa1383960:three_prime_UTR 40.0%
! TTTGTTGGCTGCTTCATGTT+GGG + tig0020633:12404-12423 Msa1383960:three_prime_UTR 40.0%
GAGCATAACAGAGAAGCGAA+GGG - tig0020633:4885-4904 None:intergenic 45.0%
AGAGCATAACAGAGAAGCGA+AGG - tig0020633:4886-4905 None:intergenic 45.0%
! GGAAACAAGTTGTCGGTGTT+CGG - tig0020633:5127-5146 None:intergenic 45.0%
TTCTGCGAAAGGTAATTCCG+AGG - tig0020633:5224-5243 None:intergenic 45.0%
TATTCGTCCAGTTGCTTGCA+GGG - tig0020633:5712-5731 None:intergenic 45.0%
ATATTCGTCCAGTTGCTTGC+AGG - tig0020633:5713-5732 None:intergenic 45.0%
TGGACGAATATTATCGCCAC+AGG + tig0020633:5722-5741 Msa1383960:CDS 45.0%
TTATCGCCACAGGATATGGT+TGG + tig0020633:5732-5751 Msa1383960:CDS 45.0%
GTTGAGTCAAGGAAAATGGC+CGG + tig0020633:5858-5877 Msa1383960:intron 45.0%
! AAAGCACCAGGTGATTCACT+CGG - tig0020633:6495-6514 None:intergenic 45.0%
! ACAGCTGCAGAACTTTTGGA+TGG + tig0020633:6843-6862 Msa1383960:CDS 45.0%
TCTGCTTGCAACGTTGACAA+TGG - tig0020633:6884-6903 None:intergenic 45.0%
TGCGGACATAGCAGTAATAG+TGG - tig0020633:7259-7278 None:intergenic 45.0%
ATCAGTTAGCGTTATCTGGC+CGG + tig0020633:7412-7431 Msa1383960:intron 45.0%
GGTGGAACAGTAGTAACCAT+TGG + tig0020633:7528-7547 Msa1383960:intron 45.0%
GAGGTTGGAACAGTAACCAT+TGG + tig0020633:7614-7633 Msa1383960:intron 45.0%
AGTATCTCAACCTGCTGAAC+CGG - tig0020633:7901-7920 None:intergenic 45.0%
CTTCATCTAAACAACCACGG+CGG + tig0020633:7992-8011 Msa1383960:intron 45.0%
CTCATCACTCTTGTCTTCTC+CGG - tig0020633:8035-8054 None:intergenic 45.0%
GAGAAGACAAGAGTGATGAG+AGG + tig0020633:8035-8054 Msa1383960:intron 45.0%
AAGACAAGAGTGATGAGAGG+AGG + tig0020633:8038-8057 Msa1383960:intron 45.0%
AGACAAGAGTGATGAGAGGA+GGG + tig0020633:8039-8058 Msa1383960:intron 45.0%
GCAGTCATGGAAAATGGTGA+TGG + tig0020633:8087-8106 Msa1383960:intron 45.0%
!! TCATGGAAAATGGTGATGGC+AGG + tig0020633:8091-8110 Msa1383960:intron 45.0%
!! CATGGAAAATGGTGATGGCA+GGG + tig0020633:8092-8111 Msa1383960:intron 45.0%
AGATTTGTACATGGCGGTTG+TGG + tig0020633:8482-8501 Msa1383960:intron 45.0%
GCCATTGAGATTGTAGACGA+CGG + tig0020633:8527-8546 Msa1383960:intron 45.0%
CTGAAAGGTCAGTTCGCAAA+CGG - tig0020633:8566-8585 None:intergenic 45.0%
TTGCGAACTGACCTTTCAGA+TGG + tig0020633:8567-8586 Msa1383960:intron 45.0%
ACAAGCACTCTCCATGTGTA+TGG - tig0020633:8686-8705 None:intergenic 45.0%
GCGATATTAACAGGCTTCCT+TGG - tig0020633:8859-8878 None:intergenic 45.0%
TCTGGAAAAGACAATGTGGC+TGG + tig0020633:9219-9238 Msa1383960:CDS 45.0%
AGATTAGGTTTGTCTCCAGC+TGG - tig0020633:9267-9286 None:intergenic 45.0%
GTTTGGGGATTACTGACGAT+TGG - tig0020633:9342-9361 None:intergenic 45.0%
CATAACATCACCGTCTGATG+AGG + tig0020633:9386-9405 Msa1383960:CDS 45.0%
!! AGCACCAGTTTTGTCCAAAG+AGG - tig0020633:9437-9456 None:intergenic 45.0%
! TTCAGCGGGGGAATTTTTCT+GGG - tig0020633:9496-9515 None:intergenic 45.0%
GACTGAATCTTGAGCTGCAA+CGG - tig0020633:9526-9545 None:intergenic 45.0%
CTGATGAAGCATGATGCTGA+AGG + tig0020633:10011-10030 Msa1383960:CDS 45.0%
TGTGGAGTTACCTTCATCTC+AGG + tig0020633:10800-10819 Msa1383960:intron 45.0%
GTTACCTTCATCTCAGGTCT+TGG + tig0020633:10806-10825 Msa1383960:intron 45.0%
CATATCCAATGCGAGCAATC+TGG - tig0020633:10845-10864 None:intergenic 45.0%
TGCTCGCATTGGATATGTTG+GGG + tig0020633:10848-10867 Msa1383960:intron 45.0%
!! CAACACAATGAAGGTGTTGG+TGG - tig0020633:10976-10995 None:intergenic 45.0%
CACCAACACCTTCATTGTGT+TGG + tig0020633:10974-10993 Msa1383960:intron 45.0%
GGAACTTCCAACAAAAGGTG+AGG - tig0020633:11074-11093 None:intergenic 45.0%
! TGGAAGTTCCACATCGATTG+TGG + tig0020633:11084-11103 Msa1383960:intron 45.0%
!! CAACACAATGAAGGTGTTGG+TGG - tig0020633:10976-10995 None:intergenic 45.0%
CACCAACACCTTCATTGTGT+TGG + tig0020633:10974-10993 Msa1383960:intron 45.0%
! CCTCGCAAAACTTGCTTGTA+AGG - tig0020633:11260-11279 None:intergenic 45.0%
! CCTTACAAGCAAGTTTTGCG+AGG + tig0020633:11257-11276 Msa1383960:intron 45.0%
TGAGCCTAAAGCATGGATGA+TGG - tig0020633:11355-11374 None:intergenic 45.0%
! CATCCATGCTTTAGGCTCAT+TGG + tig0020633:11356-11375 Msa1383960:intron 45.0%
! TCCATGCTTTAGGCTCATTG+GGG + tig0020633:11358-11377 Msa1383960:intron 45.0%
TGGAAATTCCGCCTTCATTG+CGG + tig0020633:11400-11419 Msa1383960:intron 45.0%
TAGAGGCCATATCGCAATGT+GGG - tig0020633:11510-11529 None:intergenic 45.0%
ATAGAGGCCATATCGCAATG+TGG - tig0020633:11511-11530 None:intergenic 45.0%
AAAAATGCGTCCAGCATGTC+GGG + tig0020633:11786-11805 Msa1383960:intron 45.0%
CGCTGCTAATCATGTCCATT+AGG + tig0020633:11945-11964 Msa1383960:intron 45.0%
TGCCAAATGTGTGAACTGGT+AGG + tig0020633:12060-12079 Msa1383960:intron 45.0%
GCCAAATGTGTGAACTGGTA+GGG + tig0020633:12061-12080 Msa1383960:intron 45.0%
TCCCTACCAGTTCACACATT+TGG - tig0020633:12065-12084 None:intergenic 45.0%
CACCTCAATTTACAGGGATG+AGG + tig0020633:12149-12168 Msa1383960:intron 45.0%
AGGGATGAGGAATATGACAC+AGG + tig0020633:12162-12181 Msa1383960:intron 45.0%
!! GAGGATTTCTGAGGCTAGAA+TGG - tig0020633:12290-12309 None:intergenic 45.0%
ATGTTGGGATCGAGCTATAG+AGG + tig0020633:12419-12438 Msa1383960:three_prime_UTR 45.0%
!!! TTTTCAATTTTTATATTTAT+AGG + tig0020633:5633-5652 Msa1383960:intron 5.0%
TTCGGAGGTGGTAGGGTTTA+GGG - tig0020633:5109-5128 None:intergenic 50.0%
! AACAAGTTGTCGGTGTTCGG+AGG - tig0020633:5124-5143 None:intergenic 50.0%
!! CTCCGAGTTTGGTTTGGATC+CGG + tig0020633:5191-5210 Msa1383960:CDS 50.0%
CTCCGGATCCAAACCAAACT+CGG - tig0020633:5196-5215 None:intergenic 50.0%
!!! ATTTTCAGGGTGCTGGGCTT+TGG + tig0020633:5393-5412 Msa1383960:intron 50.0%
GCGCACAAAATCCAGCAATG+TGG - tig0020633:5659-5678 None:intergenic 50.0%
TCTAGCAAAAAACGGGGTGG+AGG - tig0020633:6318-6337 None:intergenic 50.0%
GCTTCTAGCAAAAAACGGGG+TGG - tig0020633:6321-6340 None:intergenic 50.0%
CACGCAATTTCCGAAAGGCT+AGG + tig0020633:6397-6416 Msa1383960:CDS 50.0%
CAATTTCCGAAAGGCTAGGC+AGG + tig0020633:6401-6420 Msa1383960:CDS 50.0%
! CATCTTCCTGCCTAGCCTTT+CGG - tig0020633:6410-6429 None:intergenic 50.0%
CATAAATGCTGCCTGCCTTC+TGG + tig0020633:6465-6484 Msa1383960:CDS 50.0%
GATTCACTCGGTACTCCAGA+AGG - tig0020633:6483-6502 None:intergenic 50.0%
! GCTGCAGAACTTTTGGATGG+AGG + tig0020633:6846-6865 Msa1383960:CDS 50.0%
TCAAGTTTCTCCCGTTTGGC+AGG + tig0020633:7169-7188 Msa1383960:intron 50.0%
ACATCTCCATCCTGCCAAAC+GGG - tig0020633:7182-7201 None:intergenic 50.0%
CACATCTCCATCCTGCCAAA+CGG - tig0020633:7183-7202 None:intergenic 50.0%
ATACTCGTTATACGGGGTCC+TGG + tig0020633:7205-7224 Msa1383960:CDS 50.0%
GGTATACCTTGGATGACACC+CGG + tig0020633:7294-7313 Msa1383960:CDS 50.0%
GTATACCTTGGATGACACCC+GGG + tig0020633:7295-7314 Msa1383960:CDS 50.0%
TCAGTTAGCGTTATCTGGCC+GGG + tig0020633:7413-7432 Msa1383960:intron 50.0%
! TACCTACTAACCGGTTCAGC+AGG + tig0020633:7888-7907 Msa1383960:intron 50.0%
AACCTGCTGAACCGGTTAGT+AGG - tig0020633:7893-7912 None:intergenic 50.0%
!! TTCTCCGGTGTGTTGGTCTT+TGG - tig0020633:8020-8039 None:intergenic 50.0%
TCTTGTCTTCTCCGGTGTGT+TGG - tig0020633:8027-8046 None:intergenic 50.0%
TGCTCCGTCATCTTCCTCTA+CGG - tig0020633:8070-8089 None:intergenic 50.0%
GACGGAGCAGTCATGGAAAA+TGG + tig0020633:8081-8100 Msa1383960:intron 50.0%
ACAAAGAATTTGGCTGGCGG+TGG - tig0020633:8209-8228 None:intergenic 50.0%
GCCGTCGTCTACAATCTCAA+TGG - tig0020633:8531-8550 None:intergenic 50.0%
AAGGTCAGTTCGCAAACGGT+TGG - tig0020633:8562-8581 None:intergenic 50.0%
GACATGTGGCACCATACACA+TGG + tig0020633:8672-8691 Msa1383960:intron 50.0%
GGTAAGTCATGTCGGTGAAC+AGG + tig0020633:8774-8793 Msa1383960:intron 50.0%
!! AGTGCATTGGTTGGGGTTGA+AGG - tig0020633:8925-8944 None:intergenic 50.0%
! CTTCAGCGGGGGAATTTTTC+TGG - tig0020633:9497-9516 None:intergenic 50.0%
TGCAACGGCATCAACTTCAG+CGG - tig0020633:9511-9530 None:intergenic 50.0%
ACAAACTTGTCAGAGTGCGC+TGG + tig0020633:9546-9565 Msa1383960:CDS 50.0%
GCCCCAATATATGGGCAAAC+AGG - tig0020633:9616-9635 None:intergenic 50.0%
CTAGGCATCTCAACGAAAGG+CGG - tig0020633:9851-9870 None:intergenic 50.0%
TGTTGTGACTCGAGGTCTAG+AGG + tig0020633:10148-10167 Msa1383960:CDS 50.0%
TTTGGGTACAGTTGCGCGTT+GGG + tig0020633:10773-10792 Msa1383960:intron 50.0%
GACTCCAAGACCTGAGATGA+AGG - tig0020633:10813-10832 None:intergenic 50.0%
ACTGACCAGATTGCTCGCAT+TGG + tig0020633:10837-10856 Msa1383960:intron 50.0%
AAAGCCACATTAGGCGGCTA+GGG - tig0020633:10934-10953 None:intergenic 50.0%
AAAAGCCACATTAGGCGGCT+AGG - tig0020633:10935-10954 None:intergenic 50.0%
AAAGCCACATTAGGCGGCTA+GGG - tig0020633:10934-10953 None:intergenic 50.0%
AAAAGCCACATTAGGCGGCT+AGG - tig0020633:10935-10954 None:intergenic 50.0%
TCCCATGTTGCCTAGAGACA+CGG + tig0020633:11198-11217 Msa1383960:intron 50.0%
TTAGGGACAGTCCGCAATGA+AGG - tig0020633:11414-11433 None:intergenic 50.0%
! TTGCGGACTGTCCCTAATTG+CGG + tig0020633:11417-11436 Msa1383960:intron 50.0%
! GGTGTTGGAGGTTGCAATGA+AGG - tig0020633:11453-11472 None:intergenic 50.0%
GCAGCCTTTACCTTACAAGC+CGG + tig0020633:11549-11568 Msa1383960:intron 50.0%
!! GAATATTGGGTTGAGCCTGC+CGG - tig0020633:11571-11590 None:intergenic 50.0%
GAGCTGCCAAATGTGTGAAC+TGG + tig0020633:12056-12075 Msa1383960:CDS 50.0%
TGTGTGAACTGGTAGGGACT+AGG + tig0020633:12067-12086 Msa1383960:intron 50.0%
GTGTGAACTGGTAGGGACTA+GGG + tig0020633:12068-12087 Msa1383960:intron 50.0%
GTTCGGAGGTGGTAGGGTTT+AGG - tig0020633:5110-5129 None:intergenic 55.0%
! AAGTTGTCGGTGTTCGGAGG+TGG - tig0020633:5121-5140 None:intergenic 55.0%
GTAATTCCGAGGCTGAGCTC+CGG - tig0020633:5213-5232 None:intergenic 55.0%
!! GGTGCTGGGCTTTGGAATCT+TGG + tig0020633:5401-5420 Msa1383960:CDS 55.0%
TGCAGCTAAGGGCTCAGTGT+AGG - tig0020633:5465-5484 None:intergenic 55.0%
!! GGAGTACCGAGTGAATCACC+TGG + tig0020633:6486-6505 Msa1383960:CDS 55.0%
TGGTGGTCGTCTTCGAAGTC+AGG + tig0020633:6542-6561 Msa1383960:CDS 55.0%
ACCTTTCGTCAGCGGCTCAT+CGG + tig0020633:7040-7059 Msa1383960:CDS 55.0%
GTTTCTCCCGTTTGGCAGGA+TGG + tig0020633:7173-7192 Msa1383960:intron 55.0%
TACGGGGTCCTGGTTCATTC+TGG + tig0020633:7215-7234 Msa1383960:CDS 55.0%
CAGTTAGCGTTATCTGGCCG+GGG + tig0020633:7414-7433 Msa1383960:intron 55.0%
! CAGCTGAAGTAGGGCACCTA+GGG - tig0020633:7756-7775 None:intergenic 55.0%
! ACAGCTGAAGTAGGGCACCT+AGG - tig0020633:7757-7776 None:intergenic 55.0%
GGCTCCAAAGACCAACACAC+CGG + tig0020633:8013-8032 Msa1383960:intron 55.0%
CAAGAGTGATGAGAGGAGGG+AGG + tig0020633:8042-8061 Msa1383960:intron 55.0%
GGAGCCGTAGAGGAAGATGA+CGG + tig0020633:8063-8082 Msa1383960:intron 55.0%
!! GGAAGATGACGGAGCAGTCA+TGG + tig0020633:8074-8093 Msa1383960:intron 55.0%
AAGAATTTGGCTGGCGGTGG+AGG - tig0020633:8206-8225 None:intergenic 55.0%
! TTCTGGGTTGTACTGGTGGG+AGG - tig0020633:8271-8290 None:intergenic 55.0%
GAGATTGTAGACGACGGCGT+CGG + tig0020633:8533-8552 Msa1383960:intron 55.0%
AACGGCATCAACTTCAGCGG+GGG - tig0020633:9508-9527 None:intergenic 55.0%
CAACGGCATCAACTTCAGCG+GGG - tig0020633:9509-9528 None:intergenic 55.0%
GCAACGGCATCAACTTCAGC+GGG - tig0020633:9510-9529 None:intergenic 55.0%
CGCCTTTCGTTGAGATGCCT+AGG + tig0020633:9849-9868 Msa1383960:CDS 55.0%
GGCCTAGGCATCTCAACGAA+AGG - tig0020633:9854-9873 None:intergenic 55.0%
CGAGGTCTAGAGGAGACAGT+TGG + tig0020633:10158-10177 Msa1383960:CDS 55.0%
CTTTGGGTACAGTTGCGCGT+TGG + tig0020633:10772-10791 Msa1383960:intron 55.0%
AGTTGCGCGTTGGGATGATG+TGG + tig0020633:10782-10801 Msa1383960:intron 55.0%
TCCCACGTTGCCTAGAGACA+CGG + tig0020633:11017-11036 Msa1383960:intron 55.0%
CTACACAAGCCCGTGTCTCT+AGG - tig0020633:11030-11049 None:intergenic 55.0%
GGGACAGACCACAATCGATG+TGG - tig0020633:10914-10933 None:intergenic 55.0%
CCCGTGTCTCTAGGCAACAT+GGG - tig0020633:11202-11221 None:intergenic 55.0%
CCCATGTTGCCTAGAGACAC+GGG + tig0020633:11199-11218 Msa1383960:intron 55.0%
CTACACAAGCCCGTGTCTCT+AGG - tig0020633:11030-11049 None:intergenic 55.0%
GCCCCAATGAGCCTAAAGCA+TGG - tig0020633:11362-11381 None:intergenic 55.0%
CCTCCAACACCTTCATTGCG+CGG + tig0020633:11462-11481 Msa1383960:intron 55.0%
CTCCAACACCTTCATTGCGC+GGG + tig0020633:11463-11482 Msa1383960:intron 55.0%
TCCAACACCTTCATTGCGCG+GGG + tig0020633:11464-11483 Msa1383960:intron 55.0%
! TTCATTGCGCGGGGTGTCAA+GGG + tig0020633:11473-11492 Msa1383960:intron 55.0%
!! CCTGCCGGCTTGTAAGGTAA+AGG - tig0020633:11556-11575 None:intergenic 55.0%
CCTTTACCTTACAAGCCGGC+AGG + tig0020633:11553-11572 Msa1383960:intron 55.0%
CCTAATGTGTCCCGACATGC+TGG - tig0020633:11799-11818 None:intergenic 55.0%
CCAGCATGTCGGGACACATT+AGG + tig0020633:11796-11815 Msa1383960:intron 55.0%
! GTCGGTGTTCGGAGGTGGTA+GGG - tig0020633:5116-5135 None:intergenic 60.0%
! TGTCGGTGTTCGGAGGTGGT+AGG - tig0020633:5117-5136 None:intergenic 60.0%
TTGGATCCGGAGCTCAGCCT+CGG + tig0020633:5204-5223 Msa1383960:CDS 60.0%
GTCCAGTTGCTTGCAGGGCA+CGG - tig0020633:5707-5726 None:intergenic 60.0%
GCAAAAAACGGGGTGGAGGC+AGG - tig0020633:6314-6333 None:intergenic 60.0%
CACTCGGTACTCCAGAAGGC+AGG - tig0020633:6479-6498 None:intergenic 60.0%
ACCGATGAGCCGCTGACGAA+AGG - tig0020633:7044-7063 None:intergenic 60.0%
! CAGTACCCGGGTGTCATCCA+AGG - tig0020633:7303-7322 None:intergenic 60.0%
! GAAGTAGGGCACCTAGGGTC+TGG - tig0020633:7751-7770 None:intergenic 60.0%
! GGTGATGGCAGGGAAGACGA+CGG + tig0020633:8102-8121 Msa1383960:intron 60.0%
GTGATGGCAGGGAAGACGAC+GGG + tig0020633:8103-8122 Msa1383960:intron 60.0%
GATTCTTCTTCCGCGGGCCT+AGG - tig0020633:9869-9888 None:intergenic 60.0%
CTGTCCCTAGCCGCCTAATG+TGG + tig0020633:10927-10946 Msa1383960:intron 60.0%
CCCGTGTCTCTAGGCAACGT+GGG - tig0020633:11021-11040 None:intergenic 60.0%
CCCACGTTGCCTAGAGACAC+GGG + tig0020633:11018-11037 Msa1383960:intron 60.0%
! GGGCAGCCCTCACCTTTTGT+TGG + tig0020633:11064-11083 Msa1383960:intron 60.0%
CTGTCCCTAGCCGCCTAATG+TGG + tig0020633:10927-10946 Msa1383960:intron 60.0%
GCCCGTGTCTCTAGGCAACA+TGG - tig0020633:11203-11222 None:intergenic 60.0%
TAGGCTCATTGGGGCCTTGC+AGG + tig0020633:11367-11386 Msa1383960:intron 60.0%
ATTGGGGCCTTGCAGGAGGA+GGG + tig0020633:11374-11393 Msa1383960:intron 60.0%
GGGACAGTCCGCAATGAAGG+CGG - tig0020633:11411-11430 None:intergenic 60.0%
!! CCGCGCAATGAAGGTGTTGG+AGG - tig0020633:11465-11484 None:intergenic 60.0%
! ACCCCGCGCAATGAAGGTGT+TGG - tig0020633:11468-11487 None:intergenic 60.0%
CTTGACACCCCGCGCAATGA+AGG - tig0020633:11474-11493 None:intergenic 60.0%
! CTTCATTGCGCGGGGTGTCA+AGG + tig0020633:11472-11491 Msa1383960:intron 60.0%
! TCATTGCGCGGGGTGTCAAG+GGG + tig0020633:11474-11493 Msa1383960:intron 60.0%
!! GTTGAGCCTGCCGGCTTGTA+AGG - tig0020633:11562-11581 None:intergenic 60.0%
AGCCGTGCCCTGCAAGCAAC+TGG + tig0020633:5702-5721 Msa1383960:CDS 65.0%
!! GTTGGTCTTTGGAGCCGCCG+TGG - tig0020633:8009-8028 None:intergenic 65.0%
AGAGGAGGGAGGAGCCGTAG+AGG + tig0020633:8053-8072 Msa1383960:intron 65.0%
CGTTGAGATGCCTAGGCCCG+CGG + tig0020633:9856-9875 Msa1383960:CDS 65.0%
GCCCGTGTCTCTAGGCAACG+TGG - tig0020633:11022-11041 None:intergenic 65.0%
GCTCATTGGGGCCTTGCAGG+AGG + tig0020633:11370-11389 Msa1383960:intron 65.0%
CATTGGGGCCTTGCAGGAGG+AGG + tig0020633:11373-11392 Msa1383960:intron 65.0%
TTGGGGCCTTGCAGGAGGAG+GGG + tig0020633:11375-11394 Msa1383960:intron 65.0%
TCCAACCCCCTCCTCCTGCA+AGG - tig0020633:11384-11403 None:intergenic 65.0%
TGGGGCCTTGCAGGAGGAGG+GGG + tig0020633:11376-11395 Msa1383960:intron 70.0%
GCCTTGCAGGAGGAGGGGGT+TGG + tig0020633:11380-11399 Msa1383960:intron 70.0%
! TTGCGCGGGGTGTCAAGGGG+TGG + tig0020633:11477-11496 Msa1383960:intron 70.0%
Chromosome Type Strat End Strand Name
tig0020633 gene 4792 12762 4792 ID=Msa1383960;Name=Msa1383960
tig0020633 mRNA 4792 12762 4792 ID=Msa1383960-mRNA-1;Parent=Msa1383960;Name=Msa1383960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=187|0.7|0.81|0.90|1|1|11|439|829
tig0020633 exon 4792 5245 4792 ID=Msa1383960-mRNA-1:exon:8888;Parent=Msa1383960-mRNA-1
tig0020633 exon 5401 5515 5401 ID=Msa1383960-mRNA-1:exon:8889;Parent=Msa1383960-mRNA-1
tig0020633 exon 5655 5765 5655 ID=Msa1383960-mRNA-1:exon:8890;Parent=Msa1383960-mRNA-1
tig0020633 exon 6391 6563 6391 ID=Msa1383960-mRNA-1:exon:8891;Parent=Msa1383960-mRNA-1
tig0020633 exon 6735 7061 6735 ID=Msa1383960-mRNA-1:exon:8892;Parent=Msa1383960-mRNA-1
tig0020633 exon 7191 7316 7191 ID=Msa1383960-mRNA-1:exon:8893;Parent=Msa1383960-mRNA-1
tig0020633 exon 8811 9407 8811 ID=Msa1383960-mRNA-1:exon:8894;Parent=Msa1383960-mRNA-1
tig0020633 exon 9498 9572 9498 ID=Msa1383960-mRNA-1:exon:8895;Parent=Msa1383960-mRNA-1
tig0020633 exon 9675 10179 9675 ID=Msa1383960-mRNA-1:exon:8896;Parent=Msa1383960-mRNA-1
tig0020633 exon 12044 12077 12044 ID=Msa1383960-mRNA-1:exon:8897;Parent=Msa1383960-mRNA-1
tig0020633 exon 12164 12762 12164 ID=Msa1383960-mRNA-1:exon:8898;Parent=Msa1383960-mRNA-1
tig0020633 five_prime_UTR 4792 4978 4792 ID=Msa1383960-mRNA-1:five_prime_utr;Parent=Msa1383960-mRNA-1
tig0020633 CDS 4979 5245 4979 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 5401 5515 5401 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 5655 5765 5655 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 6391 6563 6391 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 6735 7061 6735 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 7191 7316 7191 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 8811 9407 8811 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 9498 9572 9498 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 9675 10179 9675 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 12044 12077 12044 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 CDS 12164 12323 12164 ID=Msa1383960-mRNA-1:cds;Parent=Msa1383960-mRNA-1
tig0020633 three_prime_UTR 12324 12762 12324 ID=Msa1383960-mRNA-1:three_prime_utr;Parent=Msa1383960-mRNA-1
Gene Sequence

>Msa1383960

ATGTCAGAAACTTTAATGGCTGAAACCGAAACTATTACCAAACAACACGATCCATTTCAGAGAAAAATCGAATTCATACCTGTTAAAAAACCATTCAAAGGCTTTTCCAATGATTTTCACATCGAAACCCTAAACCCTACCACCTCCGAACACCGACAACTTGTTTCCGCTAATATTCAATCATCGCAGCCACCTTCCAAAAATTCTGAATTCTCCGAGTTTGGTTTGGATCCGGAGCTCAGCCTCGGAATTACCTTTCGCAGAATAGGTGCTGGGCTTTGGAATCTTGGAAACACTTGTTTTCTGAATTCAGTTTTGCAGTGTTTGACCTACACTGAGCCCTTAGCTGCATATCTGCAAAGTGGCAAACATAAAAGTTCATGCCACATTGCTGGATTTTGTGCGCTTTGTGCAATTCAGAGTCATGTTAGCCGTGCCCTGCAAGCAACTGGACGAATATTATCGCCACAGGATATGGTTGGAAATCTGCGGTGCATATCACGCAATTTCCGAAAGGCTAGGCAGGAAGATGCACATGAGTATATGGTGAACTTACTTGAGTCAATGCATAAATGCTGCCTGCCTTCTGGAGTACCGAGTGAATCACCTGGTGCTTTCGAGAAAAGTTTAGTTCATAAGATCTTTGGTGGTCGTCTTCGAAGTCAGGTGAAATGCAGACAGTGTTCTTATTCCTCCAACAAATTTGATCCGTTCTTAGATTTAAGTCTTGAAATTTTAAAGGCAGATTCACTACAAAAGGCACTAGCAAATTTCACAGCTGCAGAACTTTTGGATGGAGGAGAGAAGCAATACCATTGTCAACGTTGCAAGCAGAAAGTGCAAGCTGTCAAACAGCTAACAATTCATAAGGCACCTTATGTGCTAGCAATTCATTTAAAGAGATTCTACCCTCATGACCCTAACATAAAGATTAAAAAGAAAGTTCGGTTTGACTCCGCACTGAATTTGAAACCTTTCGTCAGCGGCTCATCGGATGGAGATGTGAAATACTCGTTATACGGGGTCCTGGTTCATTCTGGTTTTAGTACTCACTCTGGCCACTATTACTGCTATGTCCGCACTTCAAATAACATGTGGTATACCTTGGATGACACCCGGCAAGCTTACATGTTGTTTTATGTTCGTGATAAAAAAAGTATTGCTCCAAGGAAGCCTGTTAATATCGCTAAGGAAGAGATTTCAAAGACTAATGTTACTGGAAGTAGATATCCTTCAACCCCAACCAATGCACTGAAAGATTATCCAAATGGTCATGTGGAAAATAAGTTTTGTGGGGTACCTTTGACTGCAGAAACTCAGAAAAATTTGTTAAATGCTGATCCATCAAGGATATCATATGTGAAGGATGCTCTGGTTCAGCAAAATAATAGTGGCATTTTAGCAAAAAGCTTAATTCATAATGAATGTTTATCTAAACGTACTTCCAAGGAACTTACACAGATGAATTCATCAGACGAGCTCCCTGTTGCTAAATCAGAACTTGAATGTTTATCATCCTTAGATCACTCTGGAAAAGACAATGTGGCTGGTAATCAGAAATGTTTAGTTGCACCAGCTGGAGACAAACCTAATCTGTTTACTGAGGATACACTTTTAAAAGAGGGTGTTGATTCTCCTTTAATTGAGCCAATCGTCAGTAATCCCCAAACAGTTACTGGTAAACATGCTAGTGACATAACATCACCGTCTGATGAGAAAAATTCCCCCGCTGAAGTTGATGCCGTTGCAGCTCAAGATTCAGTCACAAACTTGTCAGAGTGCGCTGGCCTTGTTGGAACTTCAAATGGTTTGGTGTATAAGAAAGCATGCAAATTATTGTGTAAGAATGCAGTTGTTTCATCAAACAGATCCTTGAAAGACTCAACTCTTGATCAAAAGCAAGTGAAAAAATCAAAAAAGAAGTTTCCAAAGTACAAGGGATCAATCATGCAACTTAGCTCGATCCGCCTTTCGTTGAGATGCCTAGGCCCGCGGAAGAAGAATCACAAAAAAAATAGACGCTGCTTGTTGGGTTTGAAGTATCATAGTAAAGAAAAGTTGAATAAACTTGCCATTTCATCAGATGTTGGACCATCTATATCCGGAAAAGACCATTTACGTTCTTCTCTGATGAAGCATGATGCTGAAGGAGAGATTATAAACAGGATGGATCGGAACTGTGCTGCGCTTGCAACAGCTACACAAGTAGAAAATATGTCCCGATGTAGTCTACAAGATGATAAGAGGGATCAAATGCATAATACTGTTGTGACTCGAGGTCTAGAGGAGACAGTTGACTATTACTTTAGAGCTGCCAAATGTGTGAACTGGGATGAGGAATATGACACAGGAAAGAGAAAGAAGTTAAGGTGTTTGAAGCAGAGTTTTGGTGGGCCAAATATTTTTCAAGAAATCGCTACCGAGAAATCTAAGTTAAAAAGGGCAAAATTAGACCATTCTAGCCTCAGAAATCCTCCATTCAGAATATAA
Protein sequence

>Msa1383960

MSETLMAETETITKQHDPFQRKIEFIPVKKPFKGFSNDFHIETLNPTTSEHRQLVSANIQSSQPPSKNSEFSEFGLDPELSLGITFRRIGAGLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHIAGFCALCAIQSHVSRALQATGRILSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPSESPGAFEKSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEILKADSLQKALANFTAAELLDGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHLKRFYPHDPNIKIKKKVRFDSALNLKPFVSGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRQAYMLFYVRDKKSIAPRKPVNIAKEEISKTNVTGSRYPSTPTNALKDYPNGHVENKFCGVPLTAETQKNLLNADPSRISYVKDALVQQNNSGILAKSLIHNECLSKRTSKELTQMNSSDELPVAKSELECLSSLDHSGKDNVAGNQKCLVAPAGDKPNLFTEDTLLKEGVDSPLIEPIVSNPQTVTGKHASDITSPSDEKNSPAEVDAVAAQDSVTNLSECAGLVGTSNGLVYKKACKLLCKNAVVSSNRSLKDSTLDQKQVKKSKKKFPKYKGSIMQLSSIRLSLRCLGPRKKNHKKNRRCLLGLKYHSKEKLNKLAISSDVGPSISGKDHLRSSLMKHDAEGEIINRMDRNCAALATATQVENMSRCSLQDDKRDQMHNTVVTRGLEETVDYYFRAAKCVNWDEEYDTGKRKKLRCLKQSFGGPNIFQEIATEKSKLKRAKLDHSSLRNPPFRI*