Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082330 | sp|O22252|MHX_ARATH | 70.455 | 528 | 147 | 4 | 9 | 530 | 15 | 539 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082330 | G7IF47 | 96.038 | 530 | 21 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1045 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0082330 | Msa0344690 | -0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0082330 | Msa0376590 | 0.800520 | 1.387027e-48 | -8.615850e-47 |
| Msa0082330 | Msa0865510 | -0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa0082330 | Msa0969520 | 0.822075 | 2.875779e-53 | -8.615850e-47 |
| Msa0082330 | Msa1075080 | -0.818600 | 1.800793e-52 | -8.615850e-47 |
| Msa0082330 | Msa1075220 | -0.812439 | 4.237055e-51 | -8.615850e-47 |
| Msa0082330 | Msa1116130 | -0.803045 | 4.204423e-49 | -8.615850e-47 |
| Msa0082330 | Msa1162550 | -0.819928 | 8.976619e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082330 | MtrunA17_Chr1g0195461 | 96.038 | 530 | 21 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1045 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082330 | AT2G47600.1 | 70.455 | 528 | 147 | 4 | 9 | 530 | 15 | 539 | 0.0 | 770 |
Find 150 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGGTTATACATAATTT+TGG | 0.157610 | 1_2:+61157726 | Msa0082330:CDS |
| ATACATATTTGCTTACTATT+TGG | 0.161747 | 1_2:+61158811 | Msa0082330:CDS |
| ACATAACTGATCTGAAATTT+TGG | 0.162293 | 1_2:+61156278 | Msa0082330:five_prime_UTR |
| ACTTTGGAAACTATTGTTTA+TGG | 0.190902 | 1_2:+61161838 | Msa0082330:three_prime_UTR |
| GGTCTGTATAATACAAATTA+AGG | 0.196530 | 1_2:-61161583 | None:intergenic |
| CTATCTTCTCTTAAGGTTTC+CGG | 0.198106 | 1_2:+61161523 | Msa0082330:CDS |
| TATGGATAGTAGAGCTATTT+TGG | 0.201570 | 1_2:+61157689 | Msa0082330:CDS |
| ATCCCGGTTCTTTCAATCTA+TGG | 0.213459 | 1_2:+61156504 | Msa0082330:CDS |
| TTATTAAACATGAGAAAGTT+TGG | 0.272245 | 1_2:+61156587 | Msa0082330:CDS |
| ATAATCTCAGCTTTAGTAAC+AGG | 0.276976 | 1_2:-61156568 | None:intergenic |
| GCAATGACGGTGTTTGTTGC+TGG | 0.288678 | 1_2:-61155603 | None:intergenic |
| AATTGCAGATATTAGTCTTT+TGG | 0.292179 | 1_2:+61156618 | Msa0082330:CDS |
| TTCTGTTTAGGAGTCTCTTC+TGG | 0.305636 | 1_2:-61158483 | None:intergenic |
| CAATTGCAAACATCACTTGC+AGG | 0.310992 | 1_2:+61160450 | Msa0082330:CDS |
| GTATGTAATACAATAAAATA+AGG | 0.311101 | 1_2:-61161729 | None:intergenic |
| TGTTGTACTATCTTCTCTTA+AGG | 0.316583 | 1_2:+61161516 | Msa0082330:CDS |
| TAAGGAAGAGTGATGACTTC+TGG | 0.333268 | 1_2:-61161655 | None:intergenic |
| ATTGATGCTATACGGAATCT+AGG | 0.335694 | 1_2:+61156679 | Msa0082330:CDS |
| GTTGTATTATGTATAGTATA+TGG | 0.339524 | 1_2:+61161616 | Msa0082330:three_prime_UTR |
| AAATCCATCCGTGAGAAATA+TGG | 0.347041 | 1_2:-61160130 | None:intergenic |
| ATACATAGGTAGAGAAATAT+AGG | 0.349225 | 1_2:-61158336 | None:intergenic |
| TGCTCATTGGACTTCTGTTT+AGG | 0.350292 | 1_2:-61158495 | None:intergenic |
| CAATTTGATTGGAGACTTAC+CGG | 0.353350 | 1_2:-61155647 | None:intergenic |
| GACAGAAGACAGAAACAAAC+TGG | 0.355547 | 1_2:+61155519 | Msa0082330:five_prime_UTR |
| TATGTATAGTATATGGTTCC+TGG | 0.361822 | 1_2:+61161623 | Msa0082330:three_prime_UTR |
| TTCCTTAGTCCCTCGTGTAT+TGG | 0.368361 | 1_2:+61161671 | Msa0082330:three_prime_UTR |
| GTATTGGCATACCTCTTCTA+AGG | 0.369504 | 1_2:+61161687 | Msa0082330:three_prime_UTR |
| GAGAGGGAAAACAATTTGAT+TGG | 0.375241 | 1_2:-61155658 | None:intergenic |
| CTCATCATGACCCAGAAAAC+TGG | 0.377169 | 1_2:-61156368 | None:intergenic |
| ACCTAAAATAATTGTGCATA+AGG | 0.381520 | 1_2:-61155770 | None:intergenic |
| CATCTCTTGGAAATAGTGTT+AGG | 0.383494 | 1_2:+61156425 | Msa0082330:CDS |
| TGTTTGTTGCTGGGTGAAAA+AGG | 0.386200 | 1_2:-61155593 | None:intergenic |
| TCCCACAGAGTTATCACGTT+TGG | 0.392817 | 1_2:-61158245 | None:intergenic |
| GCAGAACCAACTAGTGTTCC+AGG | 0.396711 | 1_2:-61157583 | None:intergenic |
| AGCTTGGAGGACCAAGACTT+TGG | 0.399701 | 1_2:+61161449 | Msa0082330:CDS |
| GAGATGAGAGGCCAGAGGAC+TGG | 0.400303 | 1_2:+61158457 | Msa0082330:CDS |
| TTGTTGACAGTACTTCAGTA+TGG | 0.402969 | 1_2:+61158272 | Msa0082330:CDS |
| AGATGAGAGGCCAGAGGACT+GGG | 0.404824 | 1_2:+61158458 | Msa0082330:CDS |
| AGAGCACTCCACTTGCTCAT+TGG | 0.407702 | 1_2:-61158508 | None:intergenic |
| ACATAATACAACAATGGATA+AGG | 0.408035 | 1_2:-61161605 | None:intergenic |
| TAGCTACTATTGATGCTATA+CGG | 0.408093 | 1_2:+61156671 | Msa0082330:CDS |
| ATCATGCTTGCAACTAAATC+AGG | 0.413849 | 1_2:-61160395 | None:intergenic |
| TTCTCCCTAGAGAGGAACTT+TGG | 0.417023 | 1_2:+61161822 | Msa0082330:three_prime_UTR |
| AGATTGCAGATCTAGGAGTA+TGG | 0.417590 | 1_2:+61157671 | Msa0082330:CDS |
| TCTTCTGGCACCCAGTCCTC+TGG | 0.419339 | 1_2:-61158468 | None:intergenic |
| TTTCCATAGATTGAAAGAAC+CGG | 0.427654 | 1_2:-61156507 | None:intergenic |
| GGTGATGTGAATGTTATCTT+TGG | 0.433695 | 1_2:+61156245 | Msa0082330:intron |
| AGTTTCCAAAGTTCCTCTCT+AGG | 0.444295 | 1_2:-61161827 | None:intergenic |
| TGCCAAATCCAAGTAGCAAA+AGG | 0.447498 | 1_2:-61156313 | None:intergenic |
| TGGAGACTTACCGGCGAAGA+TGG | 0.447611 | 1_2:-61155638 | None:intergenic |
| CATAATACAACAATGGATAA+GGG | 0.459605 | 1_2:-61161604 | None:intergenic |
| GCTTGGAGGACCAAGACTTT+GGG | 0.459664 | 1_2:+61161450 | Msa0082330:CDS |
| TATGTAATACAATAAAATAA+GGG | 0.460893 | 1_2:-61161728 | None:intergenic |
| GAATTTAGAATTGAAAATTG+AGG | 0.464057 | 1_2:-61155725 | None:intergenic |
| AATTTAGAATTGAAAATTGA+GGG | 0.466104 | 1_2:-61155724 | None:intergenic |
| AATACAATTCTAAATGAATC+CGG | 0.467656 | 1_2:-61161542 | None:intergenic |
| GTCTGTATAATACAAATTAA+GGG | 0.472461 | 1_2:-61161582 | None:intergenic |
| CAATGACGGTGTTTGTTGCT+GGG | 0.473628 | 1_2:-61155602 | None:intergenic |
| TTGATGCTATACGGAATCTA+GGG | 0.475105 | 1_2:+61156680 | Msa0082330:CDS |
| TGGAAACTATTGTTTATGGC+TGG | 0.476306 | 1_2:+61161842 | Msa0082330:three_prime_UTR |
| CACTAGCCAGTGGGACCTCA+TGG | 0.480616 | 1_2:+61160372 | Msa0082330:CDS |
| TACATAGGTAGAGAAATATA+GGG | 0.482391 | 1_2:-61158335 | None:intergenic |
| AATCTAGGGGACTTGTATGC+TGG | 0.488664 | 1_2:+61156694 | Msa0082330:CDS |
| CAAGCATTCAAGGGAGGTTG+TGG | 0.489055 | 1_2:+61156537 | Msa0082330:CDS |
| TTTAGTGGAGAAACATCTCT+TGG | 0.489986 | 1_2:+61156412 | Msa0082330:CDS |
| TGCCAATACACGAGGGACTA+AGG | 0.491425 | 1_2:-61161673 | None:intergenic |
| TACCACACAAACAGCGTGGA+TGG | 0.500886 | 1_2:-61157623 | None:intergenic |
| GATCTTATAAGTTGTGTCAC+AGG | 0.501702 | 1_2:+61160212 | Msa0082330:CDS |
| TTGGGACCTGGAACACTAGT+TGG | 0.506702 | 1_2:+61157577 | Msa0082330:CDS |
| CGTGCCATATTTCTCACGGA+TGG | 0.508251 | 1_2:+61160126 | Msa0082330:CDS |
| TATTTGGAGACAGCAATTTG+TGG | 0.508898 | 1_2:+61158827 | Msa0082330:CDS |
| GAGGACCAAGACTTTGGGCA+TGG | 0.513831 | 1_2:+61161455 | Msa0082330:CDS |
| CCTCTCCGAATCCAAAATGC+AGG | 0.516851 | 1_2:+61161337 | Msa0082330:CDS |
| AAACAGCGTGGATGGGGAAG+AGG | 0.519075 | 1_2:-61157615 | None:intergenic |
| TAATATTTAGGTTTGGGACC+TGG | 0.520382 | 1_2:+61157565 | Msa0082330:intron |
| TTGAATTGATAGAGCAGAGA+GGG | 0.522746 | 1_2:-61155674 | None:intergenic |
| GTTTCCAAAGTTCCTCTCTA+GGG | 0.524633 | 1_2:-61161826 | None:intergenic |
| AAAATGTGGTCAAGCATTCA+AGG | 0.527731 | 1_2:+61156527 | Msa0082330:CDS |
| TTACATTGTGACTAAGATAA+CGG | 0.532903 | 1_2:+61160190 | Msa0082330:CDS |
| ATCAGGCCATGAGGTCCCAC+TGG | 0.534624 | 1_2:-61160378 | None:intergenic |
| TTCCATAGATTGAAAGAACC+GGG | 0.535724 | 1_2:-61156506 | None:intergenic |
| ATGTTGGCATTGGTGTTCCA+TGG | 0.536328 | 1_2:+61161275 | Msa0082330:CDS |
| GTAACCCATGCCCAAAGTCT+TGG | 0.537079 | 1_2:-61161460 | None:intergenic |
| CCACACAAACAGCGTGGATG+GGG | 0.537126 | 1_2:-61157621 | None:intergenic |
| CCTCCGTGCCATATTTCTCA+CGG | 0.539548 | 1_2:+61160122 | Msa0082330:CDS |
| ATGTATAGTATATGGTTCCT+GGG | 0.539590 | 1_2:+61161624 | Msa0082330:three_prime_UTR |
| CAAGGTTATAGAACCAAGAC+TGG | 0.539705 | 1_2:+61158785 | Msa0082330:CDS |
| ACCACACAAACAGCGTGGAT+GGG | 0.540101 | 1_2:-61157622 | None:intergenic |
| CCCCATCCACGCTGTTTGTG+TGG | 0.540973 | 1_2:+61157621 | Msa0082330:CDS |
| TGTGTGGTAATTCCAAAAGC+AGG | 0.541055 | 1_2:+61157637 | Msa0082330:CDS |
| CTTTCAATCTATGGAAAATG+TGG | 0.541423 | 1_2:+61156513 | Msa0082330:CDS |
| AGAACGTGTTTACATTTGCA+TGG | 0.543137 | 1_2:-61155545 | None:intergenic |
| GAATTCGCCGGTGGCAATGA+CGG | 0.549191 | 1_2:-61155616 | None:intergenic |
| GCCAAATCCAAGTAGCAAAA+GGG | 0.552220 | 1_2:-61156312 | None:intergenic |
| TGAGATACATCCAACGGAAG+TGG | 0.554803 | 1_2:-61161392 | None:intergenic |
| AGGACCAAGACTTTGGGCAT+GGG | 0.560608 | 1_2:+61161456 | Msa0082330:CDS |
| AGAGTGATGACTTCTGGAGA+GGG | 0.568361 | 1_2:-61161649 | None:intergenic |
| TTTAGAATTGAAAATTGAGG+GGG | 0.573797 | 1_2:-61155722 | None:intergenic |
| ACAAACACCGTCATTGCCAC+CGG | 0.574351 | 1_2:+61155609 | Msa0082330:five_prime_UTR |
| ATGTAATACAATAAAATAAG+GGG | 0.574807 | 1_2:-61161727 | None:intergenic |
| TGTAATACAATAAAATAAGG+GGG | 0.575055 | 1_2:-61161726 | None:intergenic |
| TACAAAGTATCTATAAGCCA+TGG | 0.575688 | 1_2:-61161292 | None:intergenic |
| CCGGCGAATTCCATCTTCGC+CGG | 0.580070 | 1_2:+61155628 | Msa0082330:five_prime_UTR |
| ACAGAAGTCCAATGAGCAAG+TGG | 0.582888 | 1_2:+61158500 | Msa0082330:CDS |
| GTGAACATATATGTTGGCAT+TGG | 0.584692 | 1_2:+61161265 | Msa0082330:CDS |
| AAATATGTATCATCCAGTCT+TGG | 0.585616 | 1_2:-61158798 | None:intergenic |
| AATTCAGTGAACATATATGT+TGG | 0.588017 | 1_2:+61161259 | Msa0082330:CDS |
| CTAGGGGACTTGTATGCTGG+AGG | 0.592030 | 1_2:+61156697 | Msa0082330:CDS |
| CTCTCCGAATCCAAAATGCA+GGG | 0.594970 | 1_2:+61161338 | Msa0082330:CDS |
| GATTATCGGCTATAACATCC+CGG | 0.597399 | 1_2:+61156488 | Msa0082330:CDS |
| ATTAAATCTTCTCCCTAGAG+AGG | 0.598371 | 1_2:+61161814 | Msa0082330:three_prime_UTR |
| TACTATACATAATACAACAA+TGG | 0.599493 | 1_2:-61161611 | None:intergenic |
| GCAATTTGTGGATGCACTGA+CGG | 0.607292 | 1_2:+61158839 | Msa0082330:CDS |
| ATAGTAGCTAATGAAATCTG+AGG | 0.608171 | 1_2:-61156658 | None:intergenic |
| ATTTAGAATTGAAAATTGAG+GGG | 0.612355 | 1_2:-61155723 | None:intergenic |
| GACTTCTGGAGAGGGCACCC+AGG | 0.612446 | 1_2:-61161641 | None:intergenic |
| GAACAATATCTATATCCGCA+TGG | 0.616505 | 1_2:+61160043 | Msa0082330:CDS |
| CATTTACAGCACTAGCCAGT+GGG | 0.620095 | 1_2:+61160363 | Msa0082330:CDS |
| ATTGTGCATAAGGCAAGTTG+TGG | 0.626035 | 1_2:-61155760 | None:intergenic |
| AAGAGTGATGACTTCTGGAG+AGG | 0.626377 | 1_2:-61161650 | None:intergenic |
| CCGGCGAAGATGGAATTCGC+CGG | 0.627878 | 1_2:-61155628 | None:intergenic |
| GTAATACAATAAAATAAGGG+GGG | 0.632300 | 1_2:-61161725 | None:intergenic |
| TCCAAACGTGATAACTCTGT+GGG | 0.634709 | 1_2:+61158244 | Msa0082330:CDS |
| CTCCAAACGTGATAACTCTG+TGG | 0.639009 | 1_2:+61158243 | Msa0082330:CDS |
| GCATTTACAGCACTAGCCAG+TGG | 0.639064 | 1_2:+61160362 | Msa0082330:CDS |
| AAATGTGGTCAAGCATTCAA+GGG | 0.639474 | 1_2:+61156528 | Msa0082330:CDS |
| CTCCGAATCCAAAATGCAGG+GGG | 0.644346 | 1_2:+61161340 | Msa0082330:CDS |
| TTTGAAGTGCAAGAGATGAG+AGG | 0.653443 | 1_2:+61158445 | Msa0082330:intron |
| ATTGAATTGATAGAGCAGAG+AGG | 0.661520 | 1_2:-61155675 | None:intergenic |
| TGCAAGAGATGAGAGGCCAG+AGG | 0.661620 | 1_2:+61158452 | Msa0082330:CDS |
| CTTATGCTCAAGACAAACGT+TGG | 0.664142 | 1_2:+61158312 | Msa0082330:CDS |
| GCGAAGATGGAATTCGCCGG+TGG | 0.665334 | 1_2:-61155625 | None:intergenic |
| AAAGCGAACATAAATCTCCA+CGG | 0.667049 | 1_2:-61160095 | None:intergenic |
| CATCCGTGAGAAATATGGCA+CGG | 0.669923 | 1_2:-61160125 | None:intergenic |
| TGATGCAGAAAATTCTGACA+AGG | 0.670071 | 1_2:+61158767 | Msa0082330:CDS |
| CAAAACTGAGATACATCCAA+CGG | 0.671625 | 1_2:-61161398 | None:intergenic |
| TCTCCGAATCCAAAATGCAG+GGG | 0.673864 | 1_2:+61161339 | Msa0082330:CDS |
| TGCAACTAAATCAGGCCATG+AGG | 0.674005 | 1_2:-61160387 | None:intergenic |
| AAACGTGATAACTCTGTGGG+AGG | 0.682416 | 1_2:+61158247 | Msa0082330:CDS |
| AAGAGGTATGCCAATACACG+AGG | 0.689617 | 1_2:-61161681 | None:intergenic |
| TGATGCTATACGGAATCTAG+GGG | 0.693834 | 1_2:+61156681 | Msa0082330:CDS |
| ATACTGAAGTACTGTCAACA+AGG | 0.696254 | 1_2:-61158270 | None:intergenic |
| TGTGGTCAAGCATTCAAGGG+AGG | 0.696613 | 1_2:+61156531 | Msa0082330:CDS |
| GCCAGAAAATTCGAGCCATG+CGG | 0.701112 | 1_2:-61160058 | None:intergenic |
| ACAGAAGACAGAAACAAACT+GGG | 0.703734 | 1_2:+61155520 | Msa0082330:five_prime_UTR |
| GAATTACCACACAAACAGCG+TGG | 0.704440 | 1_2:-61157627 | None:intergenic |
| AGAGGTATGCCAATACACGA+GGG | 0.724082 | 1_2:-61161680 | None:intergenic |
| AGGTGGAACAGCTACCTCTG+GGG | 0.738813 | 1_2:-61158596 | None:intergenic |
| ATTCATTCAGAAAACCCCAG+AGG | 0.754168 | 1_2:+61158582 | Msa0082330:CDS |
| CCGTGAGAAATATGGCACGG+AGG | 0.769798 | 1_2:-61160122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAATTAAT+TGG | - | chr1_2:61156017-61156036 | None:intergenic | 0.0% |
| !!! | TTAAAATATTAGTTTTCAAA+AGG | + | chr1_2:61156101-61156120 | Msa0082330:intron | 10.0% |
| !!! | TATAGAAAAATAGATTTTAA+AGG | + | chr1_2:61157261-61157280 | Msa0082330:intron | 10.0% |
| !!! | TATTTTTATTAACTCATTTA+TGG | + | chr1_2:61157810-61157829 | Msa0082330:intron | 10.0% |
| !! | AATTCATTTATAAAATGAAA+AGG | - | chr1_2:61159115-61159134 | None:intergenic | 10.0% |
| !! | TTGAATTATAAATTTATATG+GGG | + | chr1_2:61159831-61159850 | Msa0082330:intron | 10.0% |
| !! | TATGTAATACAATAAAATAA+GGG | - | chr1_2:61161731-61161750 | None:intergenic | 10.0% |
| !!! | AATTTAGAATTGAAAATTGA+GGG | - | chr1_2:61155727-61155746 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAAATGAT+TGG | + | chr1_2:61156337-61156356 | Msa0082330:exon | 15.0% |
| !! | GAAAAATGTATAAAATGATT+GGG | + | chr1_2:61156338-61156357 | Msa0082330:exon | 15.0% |
| !!! | AATTGCTTTTTATATTTTGA+GGG | + | chr1_2:61157492-61157511 | Msa0082330:intron | 15.0% |
| !! | ATTTATGATGTTTAAAAGAA+AGG | - | chr1_2:61157770-61157789 | None:intergenic | 15.0% |
| !! | ATGAGTTAATAAAAATATGA+AGG | - | chr1_2:61157807-61157826 | None:intergenic | 15.0% |
| !!! | TAACTTTTAAATACTTCTAA+TGG | - | chr1_2:61158113-61158132 | None:intergenic | 15.0% |
| !!! | AATCATTTTAATGAAGAAAA+CGG | + | chr1_2:61158537-61158556 | Msa0082330:CDS | 15.0% |
| !!! | ATTTTGCTTATAATTTGAAA+CGG | - | chr1_2:61159281-61159300 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr1_2:61159388-61159407 | Msa0082330:intron | 15.0% |
| !! | TAAAAAAACAATGTAAAGTT+TGG | + | chr1_2:61159715-61159734 | Msa0082330:intron | 15.0% |
| !! | AGAGTAACTAAAAATAAATT+TGG | + | chr1_2:61160705-61160724 | Msa0082330:intron | 15.0% |
| !!! | CTATATGTAAGTTATTTTAT+TGG | + | chr1_2:61161155-61161174 | Msa0082330:intron | 15.0% |
| !! | ATGTAATACAATAAAATAAG+GGG | - | chr1_2:61161730-61161749 | None:intergenic | 15.0% |
| !! | GTATGTAATACAATAAAATA+AGG | - | chr1_2:61161732-61161751 | None:intergenic | 15.0% |
| !!! | TACTCATATATATTTTTTGT+TGG | + | chr1_2:61161749-61161768 | Msa0082330:three_prime_UTR | 15.0% |
| !!! | ATTTAGAATTGAAAATTGAG+GGG | - | chr1_2:61155726-61155745 | None:intergenic | 20.0% |
| !!! | GAATTTAGAATTGAAAATTG+AGG | - | chr1_2:61155728-61155747 | None:intergenic | 20.0% |
| !! | TTCAATGATTAAGAAAATTG+AGG | - | chr1_2:61155817-61155836 | None:intergenic | 20.0% |
| !!! | TATTTATTTCTATGCATTGA+CGG | + | chr1_2:61155870-61155889 | Msa0082330:intron | 20.0% |
| !!! | TTTTAAGTGACAAAATATCT+TGG | - | chr1_2:61156087-61156106 | None:intergenic | 20.0% |
| !!! | GTATTGTTTTATTGGATTAT+CGG | + | chr1_2:61156474-61156493 | Msa0082330:CDS | 20.0% |
| !! | TTATTAAACATGAGAAAGTT+TGG | + | chr1_2:61156587-61156606 | Msa0082330:CDS | 20.0% |
| !!! | TTGATATGTTCATTGATTTT+GGG | + | chr1_2:61156766-61156785 | Msa0082330:intron | 20.0% |
| !!! | AATAGATTTTAAAGGTACAA+AGG | + | chr1_2:61157269-61157288 | Msa0082330:intron | 20.0% |
| !!! | TTCTCTAAAATTTAATTGCA+AGG | + | chr1_2:61157326-61157345 | Msa0082330:intron | 20.0% |
| !!! | CAATTGCTTTTTATATTTTG+AGG | + | chr1_2:61157491-61157510 | Msa0082330:intron | 20.0% |
| !!! | ATTGCTTTTTATATTTTGAG+GGG | + | chr1_2:61157493-61157512 | Msa0082330:intron | 20.0% |
| !! | TATAACTGTGCTTAATATTT+AGG | + | chr1_2:61157553-61157572 | Msa0082330:intron | 20.0% |
| !!! | CATTTGGTTATACATAATTT+TGG | + | chr1_2:61157726-61157745 | Msa0082330:CDS | 20.0% |
| !!! | ATCATTTTAATGAAGAAAAC+GGG | + | chr1_2:61158538-61158557 | Msa0082330:CDS | 20.0% |
| !! | ATACATATTTGCTTACTATT+TGG | + | chr1_2:61158811-61158830 | Msa0082330:CDS | 20.0% |
| !!! | TAGTTAATCAGGAAATTTTA+TGG | + | chr1_2:61159032-61159051 | Msa0082330:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr1_2:61159290-61159309 | Msa0082330:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | - | chr1_2:61159290-61159309 | None:intergenic | 20.0% |
| !! | AATTATAAATTTATATGGGG+AGG | + | chr1_2:61159834-61159853 | Msa0082330:intron | 20.0% |
| !! | ATTATAAATTTATATGGGGA+GGG | + | chr1_2:61159835-61159854 | Msa0082330:intron | 20.0% |
| !! | TGAACATTAGTTCATTAATA+AGG | + | chr1_2:61159922-61159941 | Msa0082330:intron | 20.0% |
| !! | TATAATTTACTGTAAAGAAG+TGG | - | chr1_2:61160267-61160286 | None:intergenic | 20.0% |
| !! | TTAATAGTTACCAAAGTTTA+TGG | + | chr1_2:61160567-61160586 | Msa0082330:intron | 20.0% |
| !!! | ATTTTTTTAGTTTAACCTGA+AGG | + | chr1_2:61160612-61160631 | Msa0082330:intron | 20.0% |
| !! | GTCCTAAATATTAACTATAA+TGG | + | chr1_2:61160750-61160769 | Msa0082330:intron | 20.0% |
| !! | CTCCATTATAGTTAATATTT+AGG | - | chr1_2:61160755-61160774 | None:intergenic | 20.0% |
| !! | TAAATTTCAATAACAAAAGC+AGG | - | chr1_2:61160859-61160878 | None:intergenic | 20.0% |
| !! | TTATTGAAATTTAGTGAGAT+CGG | + | chr1_2:61160866-61160885 | Msa0082330:intron | 20.0% |
| !! | GAGATAATTTAATATGTATG+TGG | + | chr1_2:61160983-61161002 | Msa0082330:intron | 20.0% |
| !!! | ATTCATTGTTGACATTTTTA+TGG | - | chr1_2:61161039-61161058 | None:intergenic | 20.0% |
| !! | AATACAATTCTAAATGAATC+CGG | - | chr1_2:61161545-61161564 | None:intergenic | 20.0% |
| !! | GTCTGTATAATACAAATTAA+GGG | - | chr1_2:61161585-61161604 | None:intergenic | 20.0% |
| !! | TACTATACATAATACAACAA+TGG | - | chr1_2:61161614-61161633 | None:intergenic | 20.0% |
| !! | GTTGTATTATGTATAGTATA+TGG | + | chr1_2:61161616-61161635 | Msa0082330:three_prime_UTR | 20.0% |
| !! | TGTAATACAATAAAATAAGG+GGG | - | chr1_2:61161729-61161748 | None:intergenic | 20.0% |
| !! | TTTAGAATTGAAAATTGAGG+GGG | - | chr1_2:61155725-61155744 | None:intergenic | 25.0% |
| ! | ACCTAAAATAATTGTGCATA+AGG | - | chr1_2:61155773-61155792 | None:intergenic | 25.0% |
| !! | TGTAGTTGATATGATTTGAT+TGG | + | chr1_2:61155958-61155977 | Msa0082330:intron | 25.0% |
| !!! | ACATAACTGATCTGAAATTT+TGG | + | chr1_2:61156278-61156297 | Msa0082330:five_prime_UTR | 25.0% |
| !! | AGGATATTGTTGTATTTTCT+TGG | + | chr1_2:61156445-61156464 | Msa0082330:CDS | 25.0% |
| !!! | AATTGCAGATATTAGTCTTT+TGG | + | chr1_2:61156618-61156637 | Msa0082330:CDS | 25.0% |
| !!! | CTTGATATGTTCATTGATTT+TGG | + | chr1_2:61156765-61156784 | Msa0082330:intron | 25.0% |
| ! | GAAATTTACTGAATTTATGC+TGG | + | chr1_2:61156802-61156821 | Msa0082330:intron | 25.0% |
| !! | GTTAATATGTCTTTCCATTT+TGG | + | chr1_2:61156932-61156951 | Msa0082330:intron | 25.0% |
| ! | AAAGTGGAAAGACAAATAAA+AGG | - | chr1_2:61156964-61156983 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTCTTTCCACTT+TGG | + | chr1_2:61156963-61156982 | Msa0082330:intron | 25.0% |
| ! | TTTATTTGTCTTTCCACTTT+GGG | + | chr1_2:61156964-61156983 | Msa0082330:intron | 25.0% |
| ! | TCTTTAGGTATGTTAATCAT+AGG | - | chr1_2:61157078-61157097 | None:intergenic | 25.0% |
| ! | GATTAACATACCTAAAGAAT+TGG | + | chr1_2:61157080-61157099 | Msa0082330:intron | 25.0% |
| !! | TGTGCTTAATATTTAGGTTT+GGG | + | chr1_2:61157559-61157578 | Msa0082330:intron | 25.0% |
| !! | TTGGTTATACATAATTTTGG+AGG | + | chr1_2:61157729-61157748 | Msa0082330:CDS | 25.0% |
| ! | TGTTTAAAAGAAAGGAATGT+TGG | - | chr1_2:61157762-61157781 | None:intergenic | 25.0% |
| ! | AAACTGTATCGCAAAATTTA+GGG | + | chr1_2:61157890-61157909 | Msa0082330:intron | 25.0% |
| ! | CAACAATAAAACTGATGATA+CGG | - | chr1_2:61158161-61158180 | None:intergenic | 25.0% |
| ! | TTCATCAAGAAGTTTAATGT+AGG | + | chr1_2:61158214-61158233 | Msa0082330:intron | 25.0% |
| ! | TACATAGGTAGAGAAATATA+GGG | - | chr1_2:61158338-61158357 | None:intergenic | 25.0% |
| ! | ATACATAGGTAGAGAAATAT+AGG | - | chr1_2:61158339-61158358 | None:intergenic | 25.0% |
| ! | TGCACTTCAAATATAAAATG+AGG | - | chr1_2:61158436-61158455 | None:intergenic | 25.0% |
| !!! | TCATTTTAATGAAGAAAACG+GGG | + | chr1_2:61158539-61158558 | Msa0082330:CDS | 25.0% |
| ! | AAATAGTTATACTAGAATCG+TGG | - | chr1_2:61158975-61158994 | None:intergenic | 25.0% |
| ! | AATGTTAATGAATCTCTGAT+AGG | - | chr1_2:61159008-61159027 | None:intergenic | 25.0% |
| ! | TATCAGAGATTCATTAACAT+TGG | + | chr1_2:61159007-61159026 | Msa0082330:intron | 25.0% |
| !! | AGGAAATTTTATGGATATGA+AGG | + | chr1_2:61159041-61159060 | Msa0082330:intron | 25.0% |
| ! | GTTAAGAATTTCATCATAAG+AGG | - | chr1_2:61159084-61159103 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_2:61159315-61159334 | Msa0082330:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_2:61159315-61159334 | None:intergenic | 25.0% |
| !! | AGCTACTTTATAAGGAAATA+TGG | - | chr1_2:61159442-61159461 | None:intergenic | 25.0% |
| !! | TAACAATGAGCTACTTTATA+AGG | - | chr1_2:61159450-61159469 | None:intergenic | 25.0% |
| ! | AACTATGTAAAGCAACAATA+GGG | - | chr1_2:61159593-61159612 | None:intergenic | 25.0% |
| ! | TAACTATGTAAAGCAACAAT+AGG | - | chr1_2:61159594-61159613 | None:intergenic | 25.0% |
| ! | TGAATGAAATGCATAAAACT+AGG | + | chr1_2:61159680-61159699 | Msa0082330:intron | 25.0% |
| ! | ATGCATCTCTTTATTATCAA+AGG | - | chr1_2:61159780-61159799 | None:intergenic | 25.0% |
| !! | AGATGCATTAGTTTATGAAT+GGG | + | chr1_2:61159792-61159811 | Msa0082330:intron | 25.0% |
| !!! | GGTGTGTAATTTTTTTAAAC+AGG | + | chr1_2:61159995-61160014 | Msa0082330:intron | 25.0% |
| !!! | GTGTAATTTTTTTAAACAGG+TGG | + | chr1_2:61159998-61160017 | Msa0082330:intron | 25.0% |
| !!! | TGTTCATTTTTTTAGACTCT+TGG | - | chr1_2:61160028-61160047 | None:intergenic | 25.0% |
| ! | TTACATTGTGACTAAGATAA+CGG | + | chr1_2:61160190-61160209 | Msa0082330:CDS | 25.0% |
| ! | GATGAAATAAGTCATTAACA+AGG | - | chr1_2:61160302-61160321 | None:intergenic | 25.0% |
| !! | ATACATCTCATTCTTACTTT+TGG | + | chr1_2:61160486-61160505 | Msa0082330:intron | 25.0% |
| ! | ATTATGAACATAAGTGAACT+TGG | + | chr1_2:61160832-61160851 | Msa0082330:intron | 25.0% |
| !!! | CGTACATTTTTTAATGTAAG+AGG | + | chr1_2:61160891-61160910 | Msa0082330:intron | 25.0% |
| ! | AAATGTGAAGTTTGAATTGA+TGG | - | chr1_2:61160928-61160947 | None:intergenic | 25.0% |
| ! | ACCTAGAAAATTTATTTCCT+AGG | + | chr1_2:61161066-61161085 | Msa0082330:intron | 25.0% |
| !! | TCCTAGGAAATAAATTTTCT+AGG | - | chr1_2:61161070-61161089 | None:intergenic | 25.0% |
| ! | TCGAATCAAATTTCATTGTT+TGG | + | chr1_2:61161092-61161111 | Msa0082330:intron | 25.0% |
| ! | ATCAAATTTCATTGTTTGGT+TGG | + | chr1_2:61161096-61161115 | Msa0082330:intron | 25.0% |
| ! | AATTCAGTGAACATATATGT+TGG | + | chr1_2:61161259-61161278 | Msa0082330:CDS | 25.0% |
| ! | GGTCTGTATAATACAAATTA+AGG | - | chr1_2:61161586-61161605 | None:intergenic | 25.0% |
| ! | CATAATACAACAATGGATAA+GGG | - | chr1_2:61161607-61161626 | None:intergenic | 25.0% |
| ! | ACATAATACAACAATGGATA+AGG | - | chr1_2:61161608-61161627 | None:intergenic | 25.0% |
| !!! | AATTTTAAAAGCCTTAGAAG+AGG | - | chr1_2:61161701-61161720 | None:intergenic | 25.0% |
| ! | GTAATACAATAAAATAAGGG+GGG | - | chr1_2:61161728-61161747 | None:intergenic | 25.0% |
| !! | ACTTTGGAAACTATTGTTTA+TGG | + | chr1_2:61161838-61161857 | Msa0082330:three_prime_UTR | 25.0% |
| ! | GCCTTATGCACAATTATTTT+AGG | + | chr1_2:61155769-61155788 | Msa0082330:five_prime_UTR | 30.0% |
| ACATCATGGAGTGATTTAAT+TGG | - | chr1_2:61155917-61155936 | None:intergenic | 30.0% | |
| CTGATCTATGCTTATATATC+AGG | + | chr1_2:61156224-61156243 | Msa0082330:intron | 30.0% | |
| !! | GAAAGCTACTTGATTTTTAG+TGG | + | chr1_2:61156397-61156416 | Msa0082330:CDS | 30.0% |
| TTTCCATAGATTGAAAGAAC+CGG | - | chr1_2:61156510-61156529 | None:intergenic | 30.0% | |
| CTTTCAATCTATGGAAAATG+TGG | + | chr1_2:61156513-61156532 | Msa0082330:CDS | 30.0% | |
| ! | ATAATCTCAGCTTTAGTAAC+AGG | - | chr1_2:61156571-61156590 | None:intergenic | 30.0% |
| ATAGTAGCTAATGAAATCTG+AGG | - | chr1_2:61156661-61156680 | None:intergenic | 30.0% | |
| TAGCTACTATTGATGCTATA+CGG | + | chr1_2:61156671-61156690 | Msa0082330:CDS | 30.0% | |
| ! | TTTTGAACTCTGTCTTTCAT+AGG | + | chr1_2:61156735-61156754 | Msa0082330:intron | 30.0% |
| TTATTTGTCTTTCCACTTTG+GGG | + | chr1_2:61156965-61156984 | Msa0082330:intron | 30.0% | |
| TTAGGTATGTTAATCATAGG+TGG | - | chr1_2:61157075-61157094 | None:intergenic | 30.0% | |
| TGTCAACTAACCAATTCTTT+AGG | - | chr1_2:61157093-61157112 | None:intergenic | 30.0% | |
| ! | CGACGATTTTAAACAGTTTA+AGG | - | chr1_2:61157117-61157136 | None:intergenic | 30.0% |
| ! | GTGTTTTCTTTCAAATTGTG+AGG | - | chr1_2:61157150-61157169 | None:intergenic | 30.0% |
| ! | TATTTTGTATATGTCAGTGC+TGG | + | chr1_2:61157404-61157423 | Msa0082330:intron | 30.0% |
| ! | CTGTGCTTAATATTTAGGTT+TGG | + | chr1_2:61157558-61157577 | Msa0082330:intron | 30.0% |
| !! | TTTTTCAACTTTCCTGCTTT+TGG | - | chr1_2:61157652-61157671 | None:intergenic | 30.0% |
| TTGAAAAAGATTGCAGATCT+AGG | + | chr1_2:61157664-61157683 | Msa0082330:CDS | 30.0% | |
| ! | TATGGATAGTAGAGCTATTT+TGG | + | chr1_2:61157689-61157708 | Msa0082330:CDS | 30.0% |
| !!! | TAGAGCTATTTTGGTCATTT+TGG | + | chr1_2:61157698-61157717 | Msa0082330:CDS | 30.0% |
| !!! | AGAGCTATTTTGGTCATTTT+GGG | + | chr1_2:61157699-61157718 | Msa0082330:CDS | 30.0% |
| ! | ATTTTGCGATACAGTTTGTA+AGG | - | chr1_2:61157887-61157906 | None:intergenic | 30.0% |
| CAAACTGTATCGCAAAATTT+AGG | + | chr1_2:61157889-61157908 | Msa0082330:intron | 30.0% | |
| ! | ACTTTAAGGGATGTTAGATA+TGG | + | chr1_2:61157949-61157968 | Msa0082330:intron | 30.0% |
| GATATGGTTGTACATTTCTA+TGG | + | chr1_2:61157965-61157984 | Msa0082330:intron | 30.0% | |
| TTAGGAGATGTAATACACAT+TGG | - | chr1_2:61157991-61158010 | None:intergenic | 30.0% | |
| ! | TCTTGATTGTCCTTTTTATG+CGG | + | chr1_2:61158187-61158206 | Msa0082330:intron | 30.0% |
| GATGAATATTCCGCATAAAA+AGG | - | chr1_2:61158200-61158219 | None:intergenic | 30.0% | |
| CAAGAAGTTTAATGTAGGTA+TGG | + | chr1_2:61158219-61158238 | Msa0082330:intron | 30.0% | |
| !! | CTTCAGTTTGTTTCATGTTT+TGG | + | chr1_2:61158362-61158381 | Msa0082330:intron | 30.0% |
| AGAAAGGTCAAAATTTGAGA+GGG | - | chr1_2:61158404-61158423 | None:intergenic | 30.0% | |
| TAGAAAGGTCAAAATTTGAG+AGG | - | chr1_2:61158405-61158424 | None:intergenic | 30.0% | |
| CAAATTTCACTACAATAAGG+TGG | - | chr1_2:61158616-61158635 | None:intergenic | 30.0% | |
| CACCTTATTGTAGTGAAATT+TGG | + | chr1_2:61158614-61158633 | Msa0082330:intron | 30.0% | |
| AGCCAAATTTCACTACAATA+AGG | - | chr1_2:61158619-61158638 | None:intergenic | 30.0% | |
| ! | TTTTCTGCATCATCTATTTG+AGG | - | chr1_2:61158759-61158778 | None:intergenic | 30.0% |
| AAATATGTATCATCCAGTCT+TGG | - | chr1_2:61158801-61158820 | None:intergenic | 30.0% | |
| !! | TAACATTGGCTTAGTTAATC+AGG | + | chr1_2:61159021-61159040 | Msa0082330:intron | 30.0% |
| ! | TTGCTTATAATTTGAAACGG+AGG | - | chr1_2:61159278-61159297 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | - | chr1_2:61159342-61159361 | None:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr1_2:61159391-61159410 | Msa0082330:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr1_2:61159392-61159411 | Msa0082330:intron | 30.0% |
| TAGTCAAGCTAAATTTCTTG+AGG | + | chr1_2:61159562-61159581 | Msa0082330:intron | 30.0% | |
| !! | CTTGCTCTTATTGTTGATTT+GGG | + | chr1_2:61159639-61159658 | Msa0082330:intron | 30.0% |
| AACAATGTAAAGTTTGGTAC+TGG | + | chr1_2:61159721-61159740 | Msa0082330:intron | 30.0% | |
| ! | GAGATGCATTAGTTTATGAA+TGG | + | chr1_2:61159791-61159810 | Msa0082330:intron | 30.0% |
| !! | ATTAATAAGGAGTACTGATG+TGG | + | chr1_2:61159935-61159954 | Msa0082330:intron | 30.0% |
| !! | TTAATAAGGAGTACTGATGT+GGG | + | chr1_2:61159936-61159955 | Msa0082330:intron | 30.0% |
| !!! | TCTTTTTTTACCTCTTCAAC+AGG | + | chr1_2:61160320-61160339 | Msa0082330:intron | 30.0% |
| ! | ACTATAATGGAGTTAGCTTA+TGG | + | chr1_2:61160763-61160782 | Msa0082330:intron | 30.0% |
| CTTAAGATCGCTGTATAATT+GGG | - | chr1_2:61161013-61161032 | None:intergenic | 30.0% | |
| ACTTAAGATCGCTGTATAAT+TGG | - | chr1_2:61161014-61161033 | None:intergenic | 30.0% | |
| ! | GAAATTTGATTCGAAATCCT+AGG | - | chr1_2:61161086-61161105 | None:intergenic | 30.0% |
| AAATTTCATTGTTTGGTTGG+AGG | + | chr1_2:61161099-61161118 | Msa0082330:intron | 30.0% | |
| CAGATGGGTATTAAATGAAA+GGG | - | chr1_2:61161131-61161150 | None:intergenic | 30.0% | |
| TCAGATGGGTATTAAATGAA+AGG | - | chr1_2:61161132-61161151 | None:intergenic | 30.0% | |
| CTTACATATAGAACTCAGAT+GGG | - | chr1_2:61161146-61161165 | None:intergenic | 30.0% | |
| ACTTACATATAGAACTCAGA+TGG | - | chr1_2:61161147-61161166 | None:intergenic | 30.0% | |
| TAAAGCTTCTTCATAGAACA+AGG | - | chr1_2:61161191-61161210 | None:intergenic | 30.0% | |
| ! | TATGAAGAAGCTTTATAGAG+CGG | + | chr1_2:61161196-61161215 | Msa0082330:intron | 30.0% |
| ! | TACAAAGTATCTATAAGCCA+TGG | - | chr1_2:61161295-61161314 | None:intergenic | 30.0% |
| !!! | GTATCTCAGTTTTGATTGTT+AGG | + | chr1_2:61161407-61161426 | Msa0082330:CDS | 30.0% |
| ! | ATTGTTAGGCGTATAGTTTT+TGG | + | chr1_2:61161421-61161440 | Msa0082330:CDS | 30.0% |
| TGTTGTACTATCTTCTCTTA+AGG | + | chr1_2:61161516-61161535 | Msa0082330:CDS | 30.0% | |
| TATGTATAGTATATGGTTCC+TGG | + | chr1_2:61161623-61161642 | Msa0082330:three_prime_UTR | 30.0% | |
| ATGTATAGTATATGGTTCCT+GGG | + | chr1_2:61161624-61161643 | Msa0082330:three_prime_UTR | 30.0% | |
| ACAGAAGACAGAAACAAACT+GGG | + | chr1_2:61155520-61155539 | Msa0082330:five_prime_UTR | 35.0% | |
| AGAACGTGTTTACATTTGCA+TGG | - | chr1_2:61155548-61155567 | None:intergenic | 35.0% | |
| CAATTTGATTGGAGACTTAC+CGG | - | chr1_2:61155650-61155669 | None:intergenic | 35.0% | |
| GAGAGGGAAAACAATTTGAT+TGG | - | chr1_2:61155661-61155680 | None:intergenic | 35.0% | |
| TTGAATTGATAGAGCAGAGA+GGG | - | chr1_2:61155677-61155696 | None:intergenic | 35.0% | |
| ATTGAATTGATAGAGCAGAG+AGG | - | chr1_2:61155678-61155697 | None:intergenic | 35.0% | |
| AATTGAAAATTGAGGGGGAA+TGG | - | chr1_2:61155720-61155739 | None:intergenic | 35.0% | |
| ACACGCATACAAATACATCA+TGG | - | chr1_2:61155931-61155950 | None:intergenic | 35.0% | |
| GGTGATGTGAATGTTATCTT+TGG | + | chr1_2:61156245-61156264 | Msa0082330:intron | 35.0% | |
| TTTAGTGGAGAAACATCTCT+TGG | + | chr1_2:61156412-61156431 | Msa0082330:CDS | 35.0% | |
| CATCTCTTGGAAATAGTGTT+AGG | + | chr1_2:61156425-61156444 | Msa0082330:CDS | 35.0% | |
| !! | GGTCTTGCGTATTGTTTTAT+TGG | + | chr1_2:61156466-61156485 | Msa0082330:CDS | 35.0% |
| TTCCATAGATTGAAAGAACC+GGG | - | chr1_2:61156509-61156528 | None:intergenic | 35.0% | |
| AAAATGTGGTCAAGCATTCA+AGG | + | chr1_2:61156527-61156546 | Msa0082330:CDS | 35.0% | |
| AAATGTGGTCAAGCATTCAA+GGG | + | chr1_2:61156528-61156547 | Msa0082330:CDS | 35.0% | |
| !!! | GATATTAGTCTTTTGGCGTT+TGG | + | chr1_2:61156625-61156644 | Msa0082330:CDS | 35.0% |
| ATTGATGCTATACGGAATCT+AGG | + | chr1_2:61156679-61156698 | Msa0082330:CDS | 35.0% | |
| TTGATGCTATACGGAATCTA+GGG | + | chr1_2:61156680-61156699 | Msa0082330:CDS | 35.0% | |
| AACTCTGTCTTTCATAGGAT+GGG | + | chr1_2:61156740-61156759 | Msa0082330:intron | 35.0% | |
| ATCTTACTAACTCTGCTTAG+TGG | + | chr1_2:61156865-61156884 | Msa0082330:intron | 35.0% | |
| AACTCTGCTTAGTGGAAAAA+AGG | + | chr1_2:61156873-61156892 | Msa0082330:intron | 35.0% | |
| ATGTTAATCATAGGTGGAGT+TGG | - | chr1_2:61157069-61157088 | None:intergenic | 35.0% | |
| CTTGATCTTTAAGCTTACGT+TGG | + | chr1_2:61157209-61157228 | Msa0082330:intron | 35.0% | |
| GCACAGTTATAGAGAGTTAT+AGG | - | chr1_2:61157544-61157563 | None:intergenic | 35.0% | |
| ! | TAATATTTAGGTTTGGGACC+TGG | + | chr1_2:61157565-61157584 | Msa0082330:intron | 35.0% |
| ATACAGTTTGTAAGGAGAGA+AGG | - | chr1_2:61157879-61157898 | None:intergenic | 35.0% | |
| TGAATATTCATCGTCAGCTT+AGG | - | chr1_2:61158009-61158028 | None:intergenic | 35.0% | |
| ! | ATTGTCCTAACTTGCAGATT+GGG | - | chr1_2:61158046-61158065 | None:intergenic | 35.0% |
| ! | AATTGTCCTAACTTGCAGAT+TGG | - | chr1_2:61158047-61158066 | None:intergenic | 35.0% |
| !! | ATACTGAAGTACTGTCAACA+AGG | - | chr1_2:61158273-61158292 | None:intergenic | 35.0% |
| TTGTTGACAGTACTTCAGTA+TGG | + | chr1_2:61158272-61158291 | Msa0082330:CDS | 35.0% | |
| ACAAACTGAAGCACATACAT+AGG | - | chr1_2:61158353-61158372 | None:intergenic | 35.0% | |
| ! | AATGAGGTGTCAGAATAGAA+AGG | - | chr1_2:61158420-61158439 | None:intergenic | 35.0% |
| TGATGCAGAAAATTCTGACA+AGG | + | chr1_2:61158767-61158786 | Msa0082330:CDS | 35.0% | |
| TATTTGGAGACAGCAATTTG+TGG | + | chr1_2:61158827-61158846 | Msa0082330:CDS | 35.0% | |
| ! | GCTGTGGTTGTTGTTATAAT+TGG | - | chr1_2:61158918-61158937 | None:intergenic | 35.0% |
| ! | ACTAGAATCGTGGATTTTGA+AGG | - | chr1_2:61158965-61158984 | None:intergenic | 35.0% |
| AGTACCTGTTGAATTTCAGA+TGG | + | chr1_2:61159415-61159434 | Msa0082330:intron | 35.0% | |
| GTACCTGTTGAATTTCAGAT+GGG | + | chr1_2:61159416-61159435 | Msa0082330:intron | 35.0% | |
| CCAAATCAACAATAAGAGCA+AGG | - | chr1_2:61159641-61159660 | None:intergenic | 35.0% | |
| ! | CCTTGCTCTTATTGTTGATT+TGG | + | chr1_2:61159638-61159657 | Msa0082330:intron | 35.0% |
| !! | TGTAAAGTTTGGTACTGGTT+TGG | + | chr1_2:61159726-61159745 | Msa0082330:intron | 35.0% |
| ATAAATTTATATGGGGAGGG+AGG | + | chr1_2:61159838-61159857 | Msa0082330:intron | 35.0% | |
| TATCGTCAATTTCTGATGAC+TGG | + | chr1_2:61159974-61159993 | Msa0082330:intron | 35.0% | |
| GAACAATATCTATATCCGCA+TGG | + | chr1_2:61160043-61160062 | Msa0082330:CDS | 35.0% | |
| AAAGCGAACATAAATCTCCA+CGG | - | chr1_2:61160098-61160117 | None:intergenic | 35.0% | |
| AAATCCATCCGTGAGAAATA+TGG | - | chr1_2:61160133-61160152 | None:intergenic | 35.0% | |
| GATCTTATAAGTTGTGTCAC+AGG | + | chr1_2:61160212-61160231 | Msa0082330:CDS | 35.0% | |
| TTTACTGTAAAGAAGTGGAG+CGG | - | chr1_2:61160262-61160281 | None:intergenic | 35.0% | |
| AGCATTTATTCCTGTTGAAG+AGG | - | chr1_2:61160333-61160352 | None:intergenic | 35.0% | |
| ATCATGCTTGCAACTAAATC+AGG | - | chr1_2:61160398-61160417 | None:intergenic | 35.0% | |
| !!! | GGAGTGCAGCTTTTTATTTT+TGG | + | chr1_2:61160588-61160607 | Msa0082330:intron | 35.0% |
| !! | TTTAACCTGAAGGTTCTGAA+AGG | + | chr1_2:61160622-61160641 | Msa0082330:intron | 35.0% |
| TCTCTAATTGCTGTGAATGT+AGG | - | chr1_2:61160967-61160986 | None:intergenic | 35.0% | |
| TCATAGAACAAGGATTTGAC+AGG | - | chr1_2:61161181-61161200 | None:intergenic | 35.0% | |
| GTGAACATATATGTTGGCAT+TGG | + | chr1_2:61161265-61161284 | Msa0082330:CDS | 35.0% | |
| CAAAACTGAGATACATCCAA+CGG | - | chr1_2:61161401-61161420 | None:intergenic | 35.0% | |
| CTATCTTCTCTTAAGGTTTC+CGG | + | chr1_2:61161523-61161542 | Msa0082330:CDS | 35.0% | |
| ATTAAATCTTCTCCCTAGAG+AGG | + | chr1_2:61161814-61161833 | Msa0082330:three_prime_UTR | 35.0% | |
| TGGAAACTATTGTTTATGGC+TGG | + | chr1_2:61161842-61161861 | Msa0082330:three_prime_UTR | 35.0% | |
| GACAGAAGACAGAAACAAAC+TGG | + | chr1_2:61155519-61155538 | Msa0082330:five_prime_UTR | 40.0% | |
| ! | TGTTTGTTGCTGGGTGAAAA+AGG | - | chr1_2:61155596-61155615 | None:intergenic | 40.0% |
| ATTGTGCATAAGGCAAGTTG+TGG | - | chr1_2:61155763-61155782 | None:intergenic | 40.0% | |
| GTTGAGTCAGTATCTATCAG+TGG | - | chr1_2:61156049-61156068 | None:intergenic | 40.0% | |
| ! | ATTGAGACCCTTTTGCTACT+TGG | + | chr1_2:61156305-61156324 | Msa0082330:five_prime_UTR | 40.0% |
| !! | ACCCTTTTGCTACTTGGATT+TGG | + | chr1_2:61156311-61156330 | Msa0082330:five_prime_UTR | 40.0% |
| GCCAAATCCAAGTAGCAAAA+GGG | - | chr1_2:61156315-61156334 | None:intergenic | 40.0% | |
| TGCCAAATCCAAGTAGCAAA+AGG | - | chr1_2:61156316-61156335 | None:intergenic | 40.0% | |
| ! | TGGGTACTTATCCAGTTTTC+TGG | + | chr1_2:61156357-61156376 | Msa0082330:CDS | 40.0% |
| ! | GGGTACTTATCCAGTTTTCT+GGG | + | chr1_2:61156358-61156377 | Msa0082330:CDS | 40.0% |
| ! | GATTATCGGCTATAACATCC+CGG | + | chr1_2:61156488-61156507 | Msa0082330:CDS | 40.0% |
| ATCCCGGTTCTTTCAATCTA+TGG | + | chr1_2:61156504-61156523 | Msa0082330:CDS | 40.0% | |
| TGATGCTATACGGAATCTAG+GGG | + | chr1_2:61156681-61156700 | Msa0082330:CDS | 40.0% | |
| GAACTCTGTCTTTCATAGGA+TGG | + | chr1_2:61156739-61156758 | Msa0082330:intron | 40.0% | |
| ! | ATAAAAGGTGTGCGCCAAAA+TGG | - | chr1_2:61156949-61156968 | None:intergenic | 40.0% |
| !!! | TTTGGGGTAGGCAACTTTTT+TGG | + | chr1_2:61156981-61157000 | Msa0082330:intron | 40.0% |
| TGTGTGGTAATTCCAAAAGC+AGG | + | chr1_2:61157637-61157656 | Msa0082330:CDS | 40.0% | |
| AGATTGCAGATCTAGGAGTA+TGG | + | chr1_2:61157671-61157690 | Msa0082330:CDS | 40.0% | |
| !! | GGTCATTTTGGGCTTACATT+TGG | + | chr1_2:61157710-61157729 | Msa0082330:CDS | 40.0% |
| CTAACATCCCTTAAAGTGAG+AGG | - | chr1_2:61157946-61157965 | None:intergenic | 40.0% | |
| TGTATCCCAATCTGCAAGTT+AGG | + | chr1_2:61158038-61158057 | Msa0082330:intron | 40.0% | |
| TCCAAACGTGATAACTCTGT+GGG | + | chr1_2:61158244-61158263 | Msa0082330:CDS | 40.0% | |
| CTTATGCTCAAGACAAACGT+TGG | + | chr1_2:61158312-61158331 | Msa0082330:CDS | 40.0% | |
| ! | TTTGAAGTGCAAGAGATGAG+AGG | + | chr1_2:61158445-61158464 | Msa0082330:intron | 40.0% |
| TTCTGTTTAGGAGTCTCTTC+TGG | - | chr1_2:61158486-61158505 | None:intergenic | 40.0% | |
| TGCTCATTGGACTTCTGTTT+AGG | - | chr1_2:61158498-61158517 | None:intergenic | 40.0% | |
| !! | TCTGGGGTTTTCTGAATGAA+TGG | - | chr1_2:61158583-61158602 | None:intergenic | 40.0% |
| ATTCATTCAGAAAACCCCAG+AGG | + | chr1_2:61158582-61158601 | Msa0082330:CDS | 40.0% | |
| CAAGGTTATAGAACCAAGAC+TGG | + | chr1_2:61158785-61158804 | Msa0082330:CDS | 40.0% | |
| TAACAACAACCACAGCCAAT+TGG | + | chr1_2:61158922-61158941 | Msa0082330:intron | 40.0% | |
| TAAAGCAGATAATAGCCTCG+TGG | + | chr1_2:61159202-61159221 | Msa0082330:intron | 40.0% | |
| ATCGAGCAATTTACTGACGT+TGG | + | chr1_2:61159752-61159771 | Msa0082330:intron | 40.0% | |
| ! | TGCTCTCTTCTTTTCATCAG+TGG | + | chr1_2:61160161-61160180 | Msa0082330:CDS | 40.0% |
| ! | GCTCTCTTCTTTTCATCAGT+GGG | + | chr1_2:61160162-61160181 | Msa0082330:CDS | 40.0% |
| CGGAATATCATTGAGTGAGA+AGG | - | chr1_2:61160242-61160261 | None:intergenic | 40.0% | |
| AGTCATTAACAAGGCAACTG+TGG | - | chr1_2:61160293-61160312 | None:intergenic | 40.0% | |
| TGCTGAACGTCAAAAAACAG+CGG | + | chr1_2:61160421-61160440 | Msa0082330:CDS | 40.0% | |
| CAATTGCAAACATCACTTGC+AGG | + | chr1_2:61160450-61160469 | Msa0082330:CDS | 40.0% | |
| AAGCTGCACTCCATAAACTT+TGG | - | chr1_2:61160580-61160599 | None:intergenic | 40.0% | |
| AACTTCCTTTCAGAACCTTC+AGG | - | chr1_2:61160630-61160649 | None:intergenic | 40.0% | |
| AAGGAAGTTATAACCTCCAG+TGG | + | chr1_2:61160641-61160660 | Msa0082330:intron | 40.0% | |
| ATAAGAAGTTGAACCACTGG+AGG | - | chr1_2:61160657-61160676 | None:intergenic | 40.0% | |
| TCCAGTGGTTCAACTTCTTA+TGG | + | chr1_2:61160656-61160675 | Msa0082330:intron | 40.0% | |
| TCCATAAGAAGTTGAACCAC+TGG | - | chr1_2:61160660-61160679 | None:intergenic | 40.0% | |
| !! | TACTCTGAGATGTTCGAAAC+AGG | - | chr1_2:61160691-61160710 | None:intergenic | 40.0% |
| !!! | ATAGTTTTTGGTGCAGAGCT+TGG | + | chr1_2:61161433-61161452 | Msa0082330:CDS | 40.0% |
| TAAGGAAGAGTGATGACTTC+TGG | - | chr1_2:61161658-61161677 | None:intergenic | 40.0% | |
| ! | GTATTGGCATACCTCTTCTA+AGG | + | chr1_2:61161687-61161706 | Msa0082330:three_prime_UTR | 40.0% |
| GTTTCCAAAGTTCCTCTCTA+GGG | - | chr1_2:61161829-61161848 | None:intergenic | 40.0% | |
| AGTTTCCAAAGTTCCTCTCT+AGG | - | chr1_2:61161830-61161849 | None:intergenic | 40.0% | |
| TGTTGCTGGGTGAAAAAGGA+GGG | - | chr1_2:61155592-61155611 | None:intergenic | 45.0% | |
| TTGTTGCTGGGTGAAAAAGG+AGG | - | chr1_2:61155593-61155612 | None:intergenic | 45.0% | |
| ! | CAATGACGGTGTTTGTTGCT+GGG | - | chr1_2:61155605-61155624 | None:intergenic | 45.0% |
| CTCATCATGACCCAGAAAAC+TGG | - | chr1_2:61156371-61156390 | None:intergenic | 45.0% | |
| AATCTAGGGGACTTGTATGC+TGG | + | chr1_2:61156694-61156713 | Msa0082330:CDS | 45.0% | |
| !! | TTGTCTTTCCACTTTGGGGT+AGG | + | chr1_2:61156969-61156988 | Msa0082330:intron | 45.0% |
| AAAAGTTGCCTACCCCAAAG+TGG | - | chr1_2:61156980-61156999 | None:intergenic | 45.0% | |
| GAATTACCACACAAACAGCG+TGG | - | chr1_2:61157630-61157649 | None:intergenic | 45.0% | |
| TGAGACCACCTCTCACTTTA+AGG | + | chr1_2:61157935-61157954 | Msa0082330:intron | 45.0% | |
| GAGACCACCTCTCACTTTAA+GGG | + | chr1_2:61157936-61157955 | Msa0082330:intron | 45.0% | |
| ACATCCCTTAAAGTGAGAGG+TGG | - | chr1_2:61157943-61157962 | None:intergenic | 45.0% | |
| CTCCAAACGTGATAACTCTG+TGG | + | chr1_2:61158243-61158262 | Msa0082330:CDS | 45.0% | |
| TCCCACAGAGTTATCACGTT+TGG | - | chr1_2:61158248-61158267 | None:intergenic | 45.0% | |
| AAACGTGATAACTCTGTGGG+AGG | + | chr1_2:61158247-61158266 | Msa0082330:CDS | 45.0% | |
| ACAGAAGTCCAATGAGCAAG+TGG | + | chr1_2:61158500-61158519 | Msa0082330:CDS | 45.0% | |
| GCAATTTGTGGATGCACTGA+CGG | + | chr1_2:61158839-61158858 | Msa0082330:CDS | 45.0% | |
| !! | CACAGCCAATTGGTGATGTT+GGG | + | chr1_2:61158932-61158951 | Msa0082330:intron | 45.0% |
| TCATAAGAGGCCTGCACTAT+AGG | - | chr1_2:61159071-61159090 | None:intergenic | 45.0% | |
| AATAGCCTCGTGGAGTTTAC+AGG | + | chr1_2:61159212-61159231 | Msa0082330:intron | 45.0% | |
| TTGATCCTGTAAACTCCACG+AGG | - | chr1_2:61159220-61159239 | None:intergenic | 45.0% | |
| ! | TGGCCCATCTGAAATTCAAC+AGG | - | chr1_2:61159422-61159441 | None:intergenic | 45.0% |
| CATCCGTGAGAAATATGGCA+CGG | - | chr1_2:61160128-61160147 | None:intergenic | 45.0% | |
| CATTTACAGCACTAGCCAGT+GGG | + | chr1_2:61160363-61160382 | Msa0082330:CDS | 45.0% | |
| TGCAACTAAATCAGGCCATG+AGG | - | chr1_2:61160390-61160409 | None:intergenic | 45.0% | |
| !! | ATGTTGGCATTGGTGTTCCA+TGG | + | chr1_2:61161275-61161294 | Msa0082330:CDS | 45.0% |
| CTCTCCGAATCCAAAATGCA+GGG | + | chr1_2:61161338-61161357 | Msa0082330:CDS | 45.0% | |
| TCTCCGAATCCAAAATGCAG+GGG | + | chr1_2:61161339-61161358 | Msa0082330:CDS | 45.0% | |
| TGAGATACATCCAACGGAAG+TGG | - | chr1_2:61161395-61161414 | None:intergenic | 45.0% | |
| ! | AGAGTGATGACTTCTGGAGA+GGG | - | chr1_2:61161652-61161671 | None:intergenic | 45.0% |
| ! | AAGAGTGATGACTTCTGGAG+AGG | - | chr1_2:61161653-61161672 | None:intergenic | 45.0% |
| TTCCTTAGTCCCTCGTGTAT+TGG | + | chr1_2:61161671-61161690 | Msa0082330:three_prime_UTR | 45.0% | |
| ! | AGAGGTATGCCAATACACGA+GGG | - | chr1_2:61161683-61161702 | None:intergenic | 45.0% |
| ! | AAGAGGTATGCCAATACACG+AGG | - | chr1_2:61161684-61161703 | None:intergenic | 45.0% |
| TTCTCCCTAGAGAGGAACTT+TGG | + | chr1_2:61161822-61161841 | Msa0082330:three_prime_UTR | 45.0% | |
| !! | ATTTGAATTATAAATTTATA+TGG | + | chr1_2:61159829-61159848 | Msa0082330:intron | 5.0% |
| !! | TTTGAATTATAAATTTATAT+GGG | + | chr1_2:61159830-61159849 | Msa0082330:intron | 5.0% |
| GTTGCTGGGTGAAAAAGGAG+GGG | - | chr1_2:61155591-61155610 | None:intergenic | 50.0% | |
| ! | GCAATGACGGTGTTTGTTGC+TGG | - | chr1_2:61155606-61155625 | None:intergenic | 50.0% |
| ACAAACACCGTCATTGCCAC+CGG | + | chr1_2:61155609-61155628 | Msa0082330:five_prime_UTR | 50.0% | |
| TGTGGTCAAGCATTCAAGGG+AGG | + | chr1_2:61156531-61156550 | Msa0082330:CDS | 50.0% | |
| CAAGCATTCAAGGGAGGTTG+TGG | + | chr1_2:61156537-61156556 | Msa0082330:CDS | 50.0% | |
| TTGGGACCTGGAACACTAGT+TGG | + | chr1_2:61157577-61157596 | Msa0082330:CDS | 50.0% | |
| GCAGAACCAACTAGTGTTCC+AGG | - | chr1_2:61157586-61157605 | None:intergenic | 50.0% | |
| ACCACACAAACAGCGTGGAT+GGG | - | chr1_2:61157625-61157644 | None:intergenic | 50.0% | |
| TACCACACAAACAGCGTGGA+TGG | - | chr1_2:61157626-61157645 | None:intergenic | 50.0% | |
| ! | AGAGCACTCCACTTGCTCAT+TGG | - | chr1_2:61158511-61158530 | None:intergenic | 50.0% |
| AAGGTGGAACAGCTACCTCT+GGG | - | chr1_2:61158600-61158619 | None:intergenic | 50.0% | |
| TAAGGTGGAACAGCTACCTC+TGG | - | chr1_2:61158601-61158620 | None:intergenic | 50.0% | |
| CCAACATCACCAATTGGCTG+TGG | - | chr1_2:61158934-61158953 | None:intergenic | 50.0% | |
| !! | CCACAGCCAATTGGTGATGT+TGG | + | chr1_2:61158931-61158950 | Msa0082330:intron | 50.0% |
| TGAAGGCTTGCCTATAGTGC+AGG | + | chr1_2:61159058-61159077 | Msa0082330:intron | 50.0% | |
| ! | TCCGCATGGCTCGAATTTTC+TGG | + | chr1_2:61160057-61160076 | Msa0082330:CDS | 50.0% |
| GCCAGAAAATTCGAGCCATG+CGG | - | chr1_2:61160061-61160080 | None:intergenic | 50.0% | |
| CCTCCGTGCCATATTTCTCA+CGG | + | chr1_2:61160122-61160141 | Msa0082330:CDS | 50.0% | |
| CGTGCCATATTTCTCACGGA+TGG | + | chr1_2:61160126-61160145 | Msa0082330:CDS | 50.0% | |
| GCATTTACAGCACTAGCCAG+TGG | + | chr1_2:61160362-61160381 | Msa0082330:CDS | 50.0% | |
| ! | CCTGCATTTTGGATTCGGAG+AGG | - | chr1_2:61161340-61161359 | None:intergenic | 50.0% |
| CCTCTCCGAATCCAAAATGC+AGG | + | chr1_2:61161337-61161356 | Msa0082330:CDS | 50.0% | |
| CTCCGAATCCAAAATGCAGG+GGG | + | chr1_2:61161340-61161359 | Msa0082330:CDS | 50.0% | |
| ! | GTCCCCCTGCATTTTGGATT+CGG | - | chr1_2:61161345-61161364 | None:intergenic | 50.0% |
| ! | AGCTAAGTCCCCCTGCATTT+TGG | - | chr1_2:61161351-61161370 | None:intergenic | 50.0% |
| ! | GTTTTCTTCGCCACTTCCGT+TGG | + | chr1_2:61161382-61161401 | Msa0082330:CDS | 50.0% |
| !!! | GTTTTTGGTGCAGAGCTTGG+AGG | + | chr1_2:61161436-61161455 | Msa0082330:CDS | 50.0% |
| AGCTTGGAGGACCAAGACTT+TGG | + | chr1_2:61161449-61161468 | Msa0082330:CDS | 50.0% | |
| GCTTGGAGGACCAAGACTTT+GGG | + | chr1_2:61161450-61161469 | Msa0082330:CDS | 50.0% | |
| AGGACCAAGACTTTGGGCAT+GGG | + | chr1_2:61161456-61161475 | Msa0082330:CDS | 50.0% | |
| GTAACCCATGCCCAAAGTCT+TGG | - | chr1_2:61161463-61161482 | None:intergenic | 50.0% | |
| CAGCAGCATGAAAAACGCAC+AGG | - | chr1_2:61161485-61161504 | None:intergenic | 50.0% | |
| ! | GTGCGTTTTTCATGCTGCTG+TGG | + | chr1_2:61161485-61161504 | Msa0082330:CDS | 50.0% |
| TGCCAATACACGAGGGACTA+AGG | - | chr1_2:61161676-61161695 | None:intergenic | 50.0% | |
| GAATTCGCCGGTGGCAATGA+CGG | - | chr1_2:61155619-61155638 | None:intergenic | 55.0% | |
| TGGAGACTTACCGGCGAAGA+TGG | - | chr1_2:61155641-61155660 | None:intergenic | 55.0% | |
| CTAGGGGACTTGTATGCTGG+AGG | + | chr1_2:61156697-61156716 | Msa0082330:CDS | 55.0% | |
| AAACAGCGTGGATGGGGAAG+AGG | - | chr1_2:61157618-61157637 | None:intergenic | 55.0% | |
| CCACACAAACAGCGTGGATG+GGG | - | chr1_2:61157624-61157643 | None:intergenic | 55.0% | |
| TGCAAGAGATGAGAGGCCAG+AGG | + | chr1_2:61158452-61158471 | Msa0082330:CDS | 55.0% | |
| AGATGAGAGGCCAGAGGACT+GGG | + | chr1_2:61158458-61158477 | Msa0082330:CDS | 55.0% | |
| AGGTGGAACAGCTACCTCTG+GGG | - | chr1_2:61158599-61158618 | None:intergenic | 55.0% | |
| GCGAGCCCAACATCACCAAT+TGG | - | chr1_2:61158940-61158959 | None:intergenic | 55.0% | |
| !!! | GGCAGCTGTTGCTTTTACCG+TGG | + | chr1_2:61160078-61160097 | Msa0082330:CDS | 55.0% |
| CCGTGAGAAATATGGCACGG+AGG | - | chr1_2:61160125-61160144 | None:intergenic | 55.0% | |
| GAGGACCAAGACTTTGGGCA+TGG | + | chr1_2:61161455-61161474 | Msa0082330:CDS | 55.0% | |
| GCGAAGATGGAATTCGCCGG+TGG | - | chr1_2:61155628-61155647 | None:intergenic | 60.0% | |
| CCGGCGAAGATGGAATTCGC+CGG | - | chr1_2:61155631-61155650 | None:intergenic | 60.0% | |
| CCGGCGAATTCCATCTTCGC+CGG | + | chr1_2:61155628-61155647 | Msa0082330:five_prime_UTR | 60.0% | |
| CCCCATCCACGCTGTTTGTG+TGG | + | chr1_2:61157621-61157640 | Msa0082330:CDS | 60.0% | |
| GAGATGAGAGGCCAGAGGAC+TGG | + | chr1_2:61158457-61158476 | Msa0082330:CDS | 60.0% | |
| TCTTCTGGCACCCAGTCCTC+TGG | - | chr1_2:61158471-61158490 | None:intergenic | 60.0% | |
| CACTAGCCAGTGGGACCTCA+TGG | + | chr1_2:61160372-61160391 | Msa0082330:CDS | 60.0% | |
| ATCAGGCCATGAGGTCCCAC+TGG | - | chr1_2:61160381-61160400 | None:intergenic | 60.0% | |
| !! | GACTTCTGGAGAGGGCACCC+AGG | - | chr1_2:61161644-61161663 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 61155518 | 61161865 | 61155518 | ID=Msa0082330;Name=Msa0082330 |
| chr1_2 | mRNA | 61155518 | 61161865 | 61155518 | ID=Msa0082330-mRNA-1;Parent=Msa0082330;Name=Msa0082330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=365|1|1|1|0.87|0.77|9|310|530 |
| chr1_2 | exon | 61155518 | 61155790 | 61155518 | ID=Msa0082330-mRNA-1:exon:20069;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61156251 | 61156718 | 61156251 | ID=Msa0082330-mRNA-1:exon:20070;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61157575 | 61157750 | 61157575 | ID=Msa0082330-mRNA-1:exon:20071;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61158236 | 61158354 | 61158236 | ID=Msa0082330-mRNA-1:exon:20072;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61158452 | 61158603 | 61158452 | ID=Msa0082330-mRNA-1:exon:20073;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61158736 | 61158860 | 61158736 | ID=Msa0082330-mRNA-1:exon:20074;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61160017 | 61160233 | 61160017 | ID=Msa0082330-mRNA-1:exon:20075;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61160342 | 61160471 | 61160342 | ID=Msa0082330-mRNA-1:exon:20076;Parent=Msa0082330-mRNA-1 |
| chr1_2 | exon | 61161258 | 61161865 | 61161258 | ID=Msa0082330-mRNA-1:exon:20077;Parent=Msa0082330-mRNA-1 |
| chr1_2 | five_prime_UTR | 61155518 | 61155790 | 61155518 | ID=Msa0082330-mRNA-1:five_prime_utr;Parent=Msa0082330-mRNA-1 |
| chr1_2 | five_prime_UTR | 61156251 | 61156342 | 61156251 | ID=Msa0082330-mRNA-1:five_prime_utr;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61156343 | 61156718 | 61156343 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61157575 | 61157750 | 61157575 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61158236 | 61158354 | 61158236 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61158452 | 61158603 | 61158452 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61158736 | 61158860 | 61158736 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61160017 | 61160233 | 61160017 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61160342 | 61160471 | 61160342 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | CDS | 61161258 | 61161555 | 61161258 | ID=Msa0082330-mRNA-1:cds;Parent=Msa0082330-mRNA-1 |
| chr1_2 | three_prime_UTR | 61161556 | 61161865 | 61161556 | ID=Msa0082330-mRNA-1:three_prime_utr;Parent=Msa0082330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
