AlfalfaGEDB | Msa0120490

M. sativa cultivar zhongmu-4 / Msa0120490

KEGG: K20624
GO: -
PFAM: PF00067.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0120490	sp\|Q9ZUX1\|C94C1_ARATH	53.226	372	167	4	1	369	127	494	5.55e-137	402

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0120490	A0A072VKA5	95.430	372	15	2	1	371	144	514	0.0	727

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0024620	Msa0120490	0.927273	1.478570e-91	-8.615850e-47
Msa0026450	Msa0120490	0.829942	3.882192e-55	-8.615850e-47
Msa0044330	Msa0120490	0.801173	1.020094e-48	-8.615850e-47
Msa0072120	Msa0120490	0.945564	2.411375e-104	-8.615850e-47
Msa0120490	Msa0145260	0.831260	1.846376e-55	-8.615850e-47
Msa0120490	Msa0163710	0.891746	2.996514e-74	-8.615850e-47
Msa0120490	Msa0165520	0.803926	2.761160e-49	-8.615850e-47
Msa0120490	Msa0229590	0.810526	1.103548e-50	-8.615850e-47
Msa0120490	Msa0935910	0.804097	2.543836e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0120490	MtrunA17_Chr1g0178971	95.430	372	15	2	1	371	144	514	0.0	727
Msa0120490	MtrunA17_Chr4g0026941	56.919	383	143	5	1	369	165	539	2.76e-155	447
Msa0120490	MtrunA17_Chr2g0321171	54.918	366	156	3	1	366	139	495	4.85e-149	430
Msa0120490	MtrunA17_Chr7g0260831	43.386	378	194	6	1	369	136	502	1.52e-105	319
Msa0120490	MtrunA17_Chr7g0260821	43.008	379	194	7	1	369	137	503	7.04e-102	310
Msa0120490	MtrunA17_Chr7g0255131	43.536	379	196	8	2	369	137	508	9.17e-97	297
Msa0120490	MtrunA17_Chr7g0225531	40.104	384	203	6	1	369	140	511	8.57e-96	295
Msa0120490	MtrunA17_Chr3g0119681	39.948	388	213	5	1	372	137	520	1.04e-94	292
Msa0120490	MtrunA17_Chr1g0184461	41.253	383	202	8	1	372	137	507	1.62e-94	291
Msa0120490	MtrunA17_Chr1g0184421	41.053	380	201	8	1	369	137	504	2.97e-91	283
Msa0120490	MtrunA17_Chr1g0164321	41.047	363	183	9	2	339	164	520	6.03e-86	270
Msa0120490	MtrunA17_Chr4g0038271	39.377	353	198	5	2	339	182	533	1.63e-84	267
Msa0120490	MtrunA17_Chr8g0387001	37.598	383	213	7	2	369	134	505	1.46e-79	253
Msa0120490	MtrunA17_Chr3g0104351	36.434	387	214	7	2	369	143	516	3.12e-78	249
Msa0120490	MtrunA17_Chr8g0348751	37.892	351	204	6	2	339	134	483	1.57e-77	248
Msa0120490	MtrunA17_Chr5g0429651	35.325	385	219	8	2	369	137	508	4.42e-73	236
Msa0120490	MtrunA17_Chr8g0351401	35.156	384	228	9	1	369	133	510	9.04e-73	235
Msa0120490	MtrunA17_Chr8g0351421	36.951	387	217	12	1	369	133	510	2.31e-72	234
Msa0120490	MtrunA17_Chr8g0351441	36.104	385	223	9	1	369	132	509	6.46e-72	233
Msa0120490	MtrunA17_Chr8g0380501	37.903	372	211	9	8	369	130	491	6.49e-72	232
Msa0120490	MtrunA17_Chr8g0351461	36.364	385	222	10	1	369	132	509	1.91e-71	231
Msa0120490	MtrunA17_Chr4g0004481	36.283	339	204	5	8	339	132	465	2.30e-70	228
Msa0120490	MtrunA17_Chr7g0227281	38.623	334	191	6	14	339	140	467	1.02e-69	226
Msa0120490	MtrunA17_Chr8g0351311	39.557	316	167	8	42	341	179	486	3.77e-69	226
Msa0120490	MtrunA17_Chr4g0067191	34.826	402	221	10	2	370	123	516	8.58e-69	224
Msa0120490	MtrunA17_Chr8g0351391	35.955	356	204	9	1	341	139	485	2.86e-68	223
Msa0120490	MtrunA17_Chr6g0449381	34.218	377	224	7	8	369	138	505	3.71e-68	223
Msa0120490	MtrunA17_Chr7g0227291	37.537	341	197	7	8	339	134	467	5.81e-68	222
Msa0120490	MtrunA17_Chr6g0449351	33.604	369	213	8	14	364	104	458	4.49e-67	219
Msa0120490	MtrunA17_Chr6g0449361	33.967	368	223	6	14	369	144	503	5.97e-67	219
Msa0120490	MtrunA17_Chr2g0309301	52.105	190	85	1	39	228	1	184	1.39e-64	203
Msa0120490	MtrunA17_Chr1g0204271	35.411	353	209	9	2	341	134	480	2.40e-63	210
Msa0120490	MtrunA17_Chr1g0163351	33.333	381	226	12	8	369	134	505	4.10e-62	207
Msa0120490	MtrunA17_Chr6g0449331	32.398	392	223	11	8	370	138	516	1.04e-61	206
Msa0120490	MtrunA17_Chr6g0449341	32.824	393	220	11	8	370	186	564	2.05e-61	206
Msa0120490	MtrunA17_Chr7g0214931	38.542	288	165	4	1	277	153	439	3.31e-60	200
Msa0120490	MtrunA17_Chr1g0163501	32.804	378	231	11	6	369	131	499	2.13e-59	199
Msa0120490	MtrunA17_Chr1g0163391	32.759	348	215	8	6	339	133	475	2.40e-59	199
Msa0120490	MtrunA17_Chr1g0163511	34.682	346	195	10	19	339	153	492	8.22e-59	199
Msa0120490	MtrunA17_Chr1g0163421	32.481	391	230	12	1	369	162	540	9.09e-59	199
Msa0120490	MtrunA17_Chr1g0171041	33.148	359	206	10	6	339	131	480	7.43e-58	196
Msa0120490	MtrunA17_Chr1g0163281	30.704	355	213	8	6	339	150	492	2.37e-57	195
Msa0120490	MtrunA17_Chr1g0163491	30.789	393	224	12	6	369	148	521	2.39e-56	192
Msa0120490	MtrunA17_Chr1g0163451	31.658	398	224	13	1	369	146	524	2.53e-56	192
Msa0120490	MtrunA17_Chr1g0163461	31.844	358	219	6	1	339	141	492	2.55e-56	192
Msa0120490	MtrunA17_Chr1g0183611	30.833	360	211	7	6	339	51	398	3.92e-54	184
Msa0120490	MtrunA17_Chr1g0184471	40.984	244	130	3	46	285	158	391	9.45e-54	182
Msa0120490	MtrunA17_Chr1g0163211	31.771	384	223	11	6	369	137	501	5.84e-52	180
Msa0120490	MtrunA17_Chr5g0403451	40.541	222	109	4	141	339	31	252	1.60e-50	170
Msa0120490	MtrunA17_Chr1g0163431	31.464	321	203	8	6	313	95	411	1.64e-48	169
Msa0120490	MtrunA17_Chr1g0163401	31.283	374	225	11	19	367	146	512	7.42e-48	169
Msa0120490	MtrunA17_Chr1g0204241	33.223	301	158	7	51	341	4	271	7.64e-47	161
Msa0120490	MtrunA17_Chr1g0164351	37.023	262	149	5	1	247	163	423	8.58e-47	164
Msa0120490	MtrunA17_Chr1g0163371	38.298	188	112	2	153	339	11	195	1.57e-44	153
Msa0120490	MtrunA17_Chr2g0309311	38.068	176	70	4	136	307	11	151	8.41e-34	124
Msa0120490	MtrunA17_Chr2g0308941	52.381	105	50	0	15	119	91	195	1.44e-32	121
Msa0120490	MtrunA17_Chr2g0308951	54.082	98	45	0	22	119	4	101	6.46e-31	114
Msa0120490	MtrunA17_Chr8g0357121	46.667	90	48	0	250	339	34	123	8.04e-25	98.6
Msa0120490	MtrunA17_Chr6g0457421	25.067	371	240	11	9	368	163	506	6.05e-21	94.4
Msa0120490	MtrunA17_Chr0c19g0493771	25.826	333	200	14	34	339	308	620	1.08e-20	94.0
Msa0120490	MtrunA17_Chr1g0203151	27.143	280	173	9	103	368	248	510	2.01e-20	92.8
Msa0120490	MtrunA17_Chr1g0203141	27.500	280	172	9	103	368	252	514	6.37e-20	91.3
Msa0120490	MtrunA17_Chr5g0396521	31.048	248	128	8	128	342	308	545	6.87e-20	91.3
Msa0120490	MtrunA17_Chr6g0472221	26.335	281	178	9	102	368	260	525	1.62e-19	90.1
Msa0120490	MtrunA17_Chr6g0479681	27.703	296	167	11	103	368	250	528	2.16e-19	89.7
Msa0120490	MtrunA17_Chr2g0280011	31.373	204	123	5	159	348	3	203	4.72e-19	84.7
Msa0120490	MtrunA17_Chr4g0014051	30.952	252	145	9	112	350	276	511	5.25e-19	88.6
Msa0120490	MtrunA17_Chr1g0164341	44.286	70	38	1	271	339	1	70	3.90e-18	79.3
Msa0120490	MtrunA17_Chr2g0280061	30.882	204	124	5	159	348	3	203	1.26e-17	80.9
Msa0120490	MtrunA17_Chr4g0039901	28.889	225	141	5	127	341	254	469	1.53e-17	84.0
Msa0120490	MtrunA17_Chr7g0215181	26.335	281	177	9	103	371	249	511	4.25e-17	82.8
Msa0120490	MtrunA17_Chr4g0030711	29.474	190	121	4	157	342	306	486	6.09e-17	82.4
Msa0120490	MtrunA17_Chr2g0280071	30.952	210	139	5	164	371	333	538	1.28e-16	81.6
Msa0120490	MtrunA17_Chr6g0451691	30.769	234	146	6	142	369	303	526	1.33e-16	81.3
Msa0120490	MtrunA17_Chr2g0280081	27.799	259	162	8	80	335	735	971	1.36e-16	81.6
Msa0120490	MtrunA17_Chr2g0280081	32.184	174	113	3	164	335	300	470	2.45e-16	80.9
Msa0120490	MtrunA17_Chr4g0030701	30.180	222	132	7	157	364	303	515	2.13e-16	80.5
Msa0120490	MtrunA17_Chr1g0164331	40.230	87	51	1	247	332	1	87	2.22e-16	75.5
Msa0120490	MtrunA17_Chr6g0484841	25.620	242	155	7	114	339	240	472	2.22e-16	80.5
Msa0120490	MtrunA17_Chr7g0235261	27.559	254	152	6	110	350	259	493	2.34e-16	80.5
Msa0120490	MtrunA17_Chr5g0446161	25.737	373	234	14	9	368	155	497	3.06e-16	80.1
Msa0120490	MtrunA17_Chr8g0354531	29.947	187	112	3	164	345	452	624	4.59e-16	79.7
Msa0120490	MtrunA17_Chr6g0484811	26.772	254	159	6	108	343	233	477	5.30e-16	79.3
Msa0120490	MtrunA17_Chr3g0128461	28.947	228	137	6	130	345	289	503	6.44e-16	79.0
Msa0120490	MtrunA17_Chr8g0387101	29.665	209	141	4	164	369	301	506	6.52e-16	79.0
Msa0120490	MtrunA17_Chr6g0451681	30.108	186	120	3	154	337	267	444	7.16e-16	79.0
Msa0120490	MtrunA17_Chr8g0362731	31.500	200	124	6	148	345	199	387	7.24e-16	78.6
Msa0120490	MtrunA17_Chr4g0058231	29.412	187	124	3	153	339	291	469	7.30e-16	79.0
Msa0120490	MtrunA17_Chr5g0405001	31.579	190	116	6	157	343	307	485	8.54e-16	78.6
Msa0120490	MtrunA17_Chr3g0094171	25.271	277	182	7	108	369	241	507	9.80e-16	78.6
Msa0120490	MtrunA17_Chr2g0280121	31.553	206	121	7	164	352	306	508	1.06e-15	78.6
Msa0120490	MtrunA17_Chr2g0288661	26.007	273	170	9	103	358	248	505	1.15e-15	78.2
Msa0120490	MtrunA17_Chr7g0248991	25.168	298	176	14	34	304	90	367	2.01e-15	77.0
Msa0120490	MtrunA17_Chr5g0430131	26.389	216	143	2	141	347	271	479	2.10e-15	77.4
Msa0120490	MtrunA17_Chr2g0280041	30.556	180	120	3	164	341	332	508	2.45e-15	77.4
Msa0120490	MtrunA17_Chr1g0197871	28.261	230	141	6	126	343	250	467	2.52e-15	77.0
Msa0120490	MtrunA17_Chr5g0430071	27.602	221	141	3	128	339	115	325	2.55e-15	76.6
Msa0120490	MtrunA17_Chr3g0086661	24.638	276	186	5	108	369	237	504	5.61e-15	76.3
Msa0120490	MtrunA17_Chr8g0354571	28.022	182	122	2	164	345	331	503	7.40e-15	75.9
Msa0120490	MtrunA17_Chr4g0004601	26.866	201	136	4	146	345	320	510	7.56e-15	75.9
Msa0120490	MtrunA17_Chr4g0046631	29.455	275	168	9	108	369	256	517	8.36e-15	75.9
Msa0120490	MtrunA17_Chr5g0430081	28.042	189	125	4	153	339	291	470	8.58e-15	75.5
Msa0120490	MtrunA17_Chr4g0046681	30.660	212	130	6	163	369	30	229	9.77e-15	73.2
Msa0120490	MtrunA17_Chr2g0307291	27.099	262	162	10	103	346	248	498	1.00e-14	75.5
Msa0120490	MtrunA17_Chr3g0086651	25.362	276	184	6	108	369	237	504	1.01e-14	75.5
Msa0120490	MtrunA17_Chr2g0313831	26.852	324	199	14	41	346	193	496	1.02e-14	75.5
Msa0120490	MtrunA17_Chr1g0164211	24.107	336	205	13	13	321	132	444	1.03e-14	75.5
Msa0120490	MtrunA17_Chr8g0354511	29.469	207	124	4	144	345	314	503	1.21e-14	75.1
Msa0120490	MtrunA17_Chr5g0446151	24.739	287	183	7	93	368	234	498	1.86e-14	74.7
Msa0120490	MtrunA17_Chr2g0307301	26.336	262	164	10	103	346	248	498	2.12e-14	74.3
Msa0120490	MtrunA17_Chr2g0314731	26.289	194	125	5	153	341	287	467	2.26e-14	74.3
Msa0120490	MtrunA17_Chr5g0413911	27.225	191	132	3	153	341	316	501	2.34e-14	74.3
Msa0120490	MtrunA17_Chr1g0207841	28.497	193	116	5	157	342	308	485	2.82e-14	73.9
Msa0120490	MtrunA17_Chr7g0246221	29.121	182	121	3	162	343	302	475	3.18e-14	73.9
Msa0120490	MtrunA17_Chr6g0451641	29.032	186	122	4	154	337	307	484	3.74e-14	73.6
Msa0120490	MtrunA17_Chr5g0443401	23.242	327	214	10	61	369	170	477	4.19e-14	73.6
Msa0120490	MtrunA17_Chr5g0403441	33.588	131	83	3	2	132	138	264	4.70e-14	72.0
Msa0120490	MtrunA17_Chr8g0390871	26.667	195	135	2	149	343	12	198	5.69e-14	70.9
Msa0120490	MtrunA17_Chr8g0380471	25.182	274	169	8	107	368	226	475	7.23e-14	72.8
Msa0120490	MtrunA17_Chr4g0008101	23.944	355	233	10	37	369	183	522	7.59e-14	72.8
Msa0120490	MtrunA17_Chr1g0182861	29.530	149	91	4	225	368	23	162	8.09e-14	68.9
Msa0120490	MtrunA17_Chr1g0197891	25.490	255	166	6	101	343	225	467	8.21e-14	72.4
Msa0120490	MtrunA17_Chr1g0197881	26.522	230	145	6	126	343	249	466	8.51e-14	72.4
Msa0120490	MtrunA17_Chr5g0430041	31.655	139	92	1	204	339	5	143	9.61e-14	68.9
Msa0120490	MtrunA17_Chr1g0197851	26.522	230	145	6	126	343	250	467	1.37e-13	72.0
Msa0120490	MtrunA17_Chr7g0246121	30.899	178	113	4	167	343	304	472	1.62e-13	71.6
Msa0120490	MtrunA17_Chr7g0255531	22.581	310	224	5	32	335	161	460	1.63e-13	71.6
Msa0120490	MtrunA17_Chr4g0056951	29.651	172	109	4	149	320	301	460	1.68e-13	71.6
Msa0120490	MtrunA17_Chr4g0058191	27.358	212	138	4	153	364	280	475	1.71e-13	71.6
Msa0120490	MtrunA17_Chr2g0313821	26.316	209	140	5	164	371	323	518	1.90e-13	71.6
Msa0120490	MtrunA17_Chr4g0058211	28.302	212	133	5	156	364	8	203	1.97e-13	68.9
Msa0120490	MtrunA17_Chr2g0314721	28.646	192	123	5	153	341	298	478	2.03e-13	71.2
Msa0120490	MtrunA17_Chr6g0472171	28.859	149	92	4	225	368	18	157	3.17e-13	67.0
Msa0120490	MtrunA17_Chr3g0107501	23.622	381	234	16	16	369	127	477	3.31e-13	70.9
Msa0120490	MtrunA17_Chr4g0058201	26.738	187	129	2	153	339	282	460	3.49e-13	70.5
Msa0120490	MtrunA17_Chr5g0431501	22.590	363	229	13	13	346	144	483	3.76e-13	70.5
Msa0120490	MtrunA17_Chr5g0431461	22.590	363	229	13	13	346	144	483	3.76e-13	70.5
Msa0120490	MtrunA17_Chr8g0356001	25.210	238	162	4	113	343	250	478	4.56e-13	70.5
Msa0120490	MtrunA17_Chr8g0351801	28.365	208	124	6	139	335	289	482	7.13e-13	69.7
Msa0120490	MtrunA17_Chr8g0354541	27.811	169	103	4	182	345	3	157	7.73e-13	66.2
Msa0120490	MtrunA17_Chr5g0431591	25.984	254	160	7	111	364	80	305	1.16e-12	68.2
Msa0120490	MtrunA17_Chr2g0308651	30.392	204	117	8	152	345	206	394	1.30e-12	68.6
Msa0120490	MtrunA17_Chr2g0313771	26.984	189	119	4	163	346	329	503	1.63e-12	68.6
Msa0120490	MtrunA17_Chr4g0035921	29.101	189	122	6	157	343	307	485	1.65e-12	68.6
Msa0120490	MtrunA17_Chr8g0390881	26.702	191	132	2	153	343	294	476	1.79e-12	68.6
Msa0120490	MtrunA17_Chr2g0313801	25.088	283	181	11	85	346	224	496	2.34e-12	68.2
Msa0120490	MtrunA17_Chr7g0246151	28.652	178	117	3	167	343	306	474	2.39e-12	68.2
Msa0120490	MtrunA17_Chr4g0011851	25.490	204	142	3	154	355	6	201	2.92e-12	65.5
Msa0120490	MtrunA17_Chr2g0313791	26.364	220	134	8	137	346	290	491	4.01e-12	67.4
Msa0120490	MtrunA17_Chr4g0063221	28.723	188	118	5	163	346	324	499	4.04e-12	67.4
Msa0120490	MtrunA17_Chr6g0451751	28.774	212	130	6	154	362	314	507	4.19e-12	67.4
Msa0120490	MtrunA17_Chr5g0431641	25.789	190	133	3	154	343	291	472	4.27e-12	67.4
Msa0120490	MtrunA17_Chr2g0313811	24.913	289	174	12	85	346	236	508	4.50e-12	67.4
Msa0120490	MtrunA17_Chr5g0430101	23.590	195	142	1	153	347	290	477	5.49e-12	67.0
Msa0120490	MtrunA17_Chr4g0011981	26.108	203	136	4	157	355	290	482	5.59e-12	67.0
Msa0120490	MtrunA17_Chr5g0431671	24.706	255	168	6	120	364	248	488	7.53e-12	66.6
Msa0120490	MtrunA17_Chr5g0430151	26.875	160	109	3	206	363	10	163	9.21e-12	63.5
Msa0120490	MtrunA17_Chr8g0344181	26.923	208	142	4	164	369	307	506	9.25e-12	66.2
Msa0120490	MtrunA17_Chr5g0445421	25.630	238	151	6	120	343	300	525	9.43e-12	66.2
Msa0120490	MtrunA17_Chr4g0057001	27.807	187	123	4	149	335	306	480	9.68e-12	66.2
Msa0120490	MtrunA17_Chr4g0020041	25.668	187	131	2	157	343	296	474	1.23e-11	65.9
Msa0120490	MtrunA17_Chr2g0313781	26.818	220	133	9	137	346	307	508	1.32e-11	65.9
Msa0120490	MtrunA17_Chr8g0372251	30.526	190	118	6	157	343	299	477	2.13e-11	65.1
Msa0120490	MtrunA17_Chr3g0116681	25.664	226	153	4	121	339	254	471	2.25e-11	65.1
Msa0120490	MtrunA17_Chr8g0346261	24.242	363	243	13	21	369	201	545	3.41e-11	64.7
Msa0120490	MtrunA17_Chr8g0344151	28.095	210	136	6	165	369	305	504	3.56e-11	64.3
Msa0120490	MtrunA17_Chr4g0046661	29.474	190	124	4	154	341	15	196	3.87e-11	62.4
Msa0120490	MtrunA17_Chr2g0296651	27.717	184	120	3	152	335	287	457	5.57e-11	63.9
Msa0120490	MtrunA17_Chr5g0430031	25.000	184	128	2	153	336	293	466	8.55e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0120490	AT2G27690.1	53.226	372	167	4	1	369	127	494	5.65e-138	402
Msa0120490	AT3G48520.1	42.632	380	194	6	1	369	133	499	4.57e-104	316
Msa0120490	AT5G63450.1	42.559	383	191	7	1	369	135	502	1.11e-100	307
Msa0120490	AT5G63450.2	42.559	383	191	7	1	369	193	560	9.02e-100	307
Msa0120490	AT1G34540.1	40.922	347	191	6	2	339	129	470	2.89e-88	275
Msa0120490	AT3G56630.1	39.200	375	216	7	2	369	129	498	2.94e-88	275
Msa0120490	AT5G08250.1	36.842	380	216	7	2	364	101	473	8.30e-86	268
Msa0120490	AT3G01900.1	39.894	376	205	7	1	369	129	490	2.18e-85	268
Msa0120490	AT5G08250.2	36.247	389	222	7	2	372	163	543	4.05e-85	268
Msa0120490	AT5G23190.1	39.093	353	199	6	2	339	162	513	7.45e-85	268
Msa0120490	AT1G24540.1	36.693	387	220	7	1	369	141	520	6.29e-84	265
Msa0120490	AT1G13140.1	37.607	351	202	5	5	339	148	497	1.22e-81	259
Msa0120490	AT1G63710.1	38.710	341	198	6	2	332	134	473	1.11e-80	256
Msa0120490	AT1G13150.1	35.509	383	225	8	5	370	141	518	1.55e-77	248
Msa0120490	AT2G45970.1	37.037	351	207	7	2	339	134	483	2.41e-76	245
Msa0120490	AT4G00360.1	36.648	352	208	6	2	339	134	484	2.45e-76	246
Msa0120490	AT1G13140.2	36.994	346	185	5	5	339	148	471	1.12e-75	243
Msa0120490	AT5G58860.1	36.434	387	214	9	2	370	137	509	1.15e-75	243
Msa0120490	AT3G26125.1	35.369	393	218	9	5	369	148	532	2.11e-75	243
Msa0120490	AT1G01600.1	36.441	354	208	5	2	339	134	486	4.51e-75	243
Msa0120490	AT2G44890.1	36.434	387	224	8	1	372	132	511	1.80e-74	239
Msa0120490	AT2G45510.1	37.465	355	204	8	1	341	132	482	1.42e-73	237
Msa0120490	AT2G23180.1	36.667	360	192	9	6	339	136	485	2.56e-71	231
Msa0120490	AT1G69500.1	36.053	380	193	8	2	337	123	496	9.13e-71	230
Msa0120490	AT4G39480.1	35.775	355	204	7	6	339	135	486	1.32e-70	230
Msa0120490	AT4G39490.1	36.798	356	190	10	12	339	141	489	1.59e-69	227
Msa0120490	AT2G21910.1	33.163	392	225	9	2	370	130	507	1.12e-66	219
Msa0120490	AT2G44890.2	34.726	383	218	9	1	372	132	493	1.31e-65	216
Msa0120490	AT4G39500.1	35.127	353	202	7	6	339	95	439	8.31e-64	211
Msa0120490	AT1G47620.1	34.115	384	220	11	2	364	139	510	1.53e-63	211
Msa0120490	AT4G39500.2	35.127	353	202	7	6	339	145	489	2.88e-63	211
Msa0120490	AT1G65340.1	32.955	352	205	8	7	339	137	476	2.29e-61	205
Msa0120490	AT1G57750.1	33.837	331	188	7	21	335	150	465	7.69e-61	204
Msa0120490	AT4G39510.1	33.420	386	229	10	2	369	130	505	1.27e-60	203
Msa0120490	AT4G32170.1	34.286	350	207	8	6	339	134	476	4.87e-60	202
Msa0120490	AT5G52320.1	30.933	375	228	8	9	366	139	499	8.79e-59	198
Msa0120490	AT5G52320.2	31.609	348	210	7	9	339	139	475	1.65e-58	197
Msa0120490	AT5G02900.1	35.928	334	183	11	30	339	125	451	2.56e-57	194
Msa0120490	AT1G57750.2	34.028	288	160	6	21	293	150	422	3.23e-50	174
Msa0120490	AT5G52400.1	30.645	248	149	8	130	368	285	518	7.94e-21	94.4
Msa0120490	AT3G53130.1	31.892	185	115	3	157	339	337	512	1.19e-19	90.9
Msa0120490	AT3G61040.1	27.715	267	179	4	108	368	235	493	2.03e-19	90.1
Msa0120490	AT4G15110.1	31.507	219	111	8	153	342	345	553	7.21e-18	85.5
Msa0120490	AT1G31800.1	25.067	371	234	15	21	369	221	569	3.70e-17	83.6
Msa0120490	AT3G14660.2	26.182	275	179	8	103	366	102	363	5.91e-17	81.6
Msa0120490	AT3G14660.1	26.182	275	179	8	103	366	248	509	1.23e-16	81.6
Msa0120490	AT1G64940.1	25.600	250	163	8	100	335	235	475	3.12e-16	80.5
Msa0120490	AT2G26710.1	27.356	329	191	14	38	346	195	495	4.93e-16	79.7
Msa0120490	AT4G13770.1	27.660	188	129	4	157	343	290	471	5.30e-16	79.7
Msa0120490	AT5G38450.1	31.628	215	129	6	156	368	317	515	1.04e-15	79.0
Msa0120490	AT3G14620.1	28.000	250	162	8	123	365	273	511	1.93e-15	78.2
Msa0120490	AT5G24900.2	27.134	328	185	13	42	345	92	389	3.31e-15	77.0
Msa0120490	AT3G14610.1	25.670	261	162	10	103	346	247	492	3.65e-15	77.0
Msa0120490	AT3G14690.2	24.803	254	160	8	109	346	289	527	4.36e-15	77.0
Msa0120490	AT3G14690.1	24.803	254	160	8	109	346	254	492	4.59e-15	77.0
Msa0120490	AT5G24900.1	27.134	328	185	13	42	345	209	506	5.05e-15	76.6
Msa0120490	AT2G30770.1	24.402	209	152	1	160	368	291	493	5.53e-15	76.6
Msa0120490	AT3G14640.2	24.735	283	177	9	85	346	249	516	7.52e-15	76.3
Msa0120490	AT3G14640.1	24.735	283	177	9	85	346	227	494	7.58e-15	76.3
Msa0120490	AT5G24910.1	25.387	323	184	11	51	345	218	511	8.26e-15	76.3
Msa0120490	AT3G14680.1	24.272	309	195	10	61	346	200	492	8.73e-15	75.9
Msa0120490	AT3G25180.1	28.342	187	120	4	154	337	300	475	1.08e-14	75.9
Msa0120490	AT5G07990.1	27.642	246	155	6	139	369	265	502	1.87e-14	75.1
Msa0120490	AT4G13310.1	32.500	160	101	2	157	316	290	442	2.83e-14	74.3
Msa0120490	AT3G14650.1	24.918	305	199	9	53	346	207	492	3.02e-14	74.3
Msa0120490	AT2G24180.1	22.740	365	239	13	12	356	144	485	4.59e-14	73.9
Msa0120490	AT3G48270.1	25.698	179	126	2	157	335	281	452	5.60e-14	73.6
Msa0120490	AT1G67110.1	31.132	212	128	7	159	368	314	509	5.74e-14	73.6
Msa0120490	AT4G13290.1	23.762	303	211	7	42	340	173	459	5.87e-14	73.6
Msa0120490	AT3G14630.1	25.475	263	165	9	103	349	244	491	8.26e-14	73.2
Msa0120490	AT3G14630.2	25.475	263	165	9	103	349	299	546	8.51e-14	73.2
Msa0120490	AT3G48310.1	24.599	187	134	2	153	339	278	457	9.57e-14	72.8
Msa0120490	AT5G24950.1	30.055	183	118	4	160	340	291	465	9.94e-14	72.8
Msa0120490	AT4G36220.1	29.319	191	119	7	157	343	309	487	2.23e-13	71.6
Msa0120490	AT2G30750.1	26.582	237	148	5	128	364	273	483	2.81e-13	71.2
Msa0120490	AT3G26200.1	23.056	360	218	10	15	343	139	470	4.10e-13	70.9
Msa0120490	AT5G06900.1	25.725	276	175	9	94	352	222	484	9.76e-13	69.7
Msa0120490	AT1G11610.2	21.351	370	241	8	15	363	144	484	1.21e-12	69.3
Msa0120490	AT3G48300.1	25.683	183	129	2	153	335	275	450	1.21e-12	69.3
Msa0120490	AT3G48300.2	25.683	183	129	2	153	335	277	452	1.22e-12	69.3
Msa0120490	AT1G64950.1	27.168	173	118	3	164	335	309	474	1.41e-12	69.3
Msa0120490	AT2G45560.1	28.333	180	121	2	160	339	304	475	1.98e-12	68.9
Msa0120490	AT2G45570.1	31.429	175	108	4	167	339	312	476	2.35e-12	68.6
Msa0120490	AT1G11610.1	21.345	342	223	6	15	335	144	460	2.72e-12	68.2
Msa0120490	AT3G26210.1	23.392	342	233	9	10	335	136	464	3.82e-12	67.8
Msa0120490	AT4G31950.1	26.855	283	173	11	108	369	236	505	4.54e-12	67.8
Msa0120490	AT1G16410.1	22.581	248	168	7	108	339	259	498	4.93e-12	67.8
Msa0120490	AT1G64930.1	27.273	176	118	4	164	336	308	476	5.52e-12	67.4
Msa0120490	AT4G31940.1	27.018	285	179	10	104	369	243	517	9.21e-12	66.6
Msa0120490	AT3G26160.1	27.668	253	160	8	108	347	235	477	9.66e-12	66.6
Msa0120490	AT3G61880.1	26.638	229	142	10	120	335	280	495	9.95e-12	66.6
Msa0120490	AT3G61880.2	26.638	229	142	10	120	335	280	495	1.56e-11	66.2
Msa0120490	AT3G48290.1	28.662	157	109	2	208	362	328	483	1.56e-11	65.9
Msa0120490	AT4G22690.1	25.877	228	150	6	103	320	282	500	1.56e-11	66.2
Msa0120490	AT4G22710.1	25.877	228	150	6	103	320	251	469	1.71e-11	65.9
Msa0120490	AT3G48290.2	28.662	157	109	2	208	362	354	509	2.00e-11	65.9
Msa0120490	AT3G28740.1	26.792	265	175	7	110	369	247	497	2.00e-11	65.9
Msa0120490	AT1G16400.1	20.968	248	172	7	108	339	258	497	2.28e-11	65.5
Msa0120490	AT2G46950.1	27.053	207	138	6	163	368	375	569	2.31e-11	65.5
Msa0120490	AT3G26320.1	25.725	276	172	10	99	357	226	485	2.90e-11	65.1
Msa0120490	AT4G31970.1	26.263	297	187	11	93	369	232	516	2.95e-11	65.1
Msa0120490	AT3G48280.1	27.322	183	126	3	157	339	281	456	3.06e-11	65.1
Msa0120490	AT3G03470.1	24.583	240	161	4	101	335	251	475	3.62e-11	65.1
Msa0120490	AT3G48320.1	25.654	191	134	3	153	342	278	461	3.87e-11	64.7
Msa0120490	AT4G12330.1	23.789	227	158	5	101	320	244	462	4.07e-11	64.7
Msa0120490	AT3G44250.1	25.000	328	194	9	42	343	168	469	4.33e-11	64.7
Msa0120490	AT2G45550.1	26.984	189	126	4	153	339	297	475	6.31e-11	64.3
Msa0120490	AT3G26150.1	26.378	254	158	7	108	345	235	475	6.51e-11	63.9
Msa0120490	AT2G12190.1	27.429	175	117	4	164	335	309	476	8.33e-11	63.9

Find 60 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATAGTCATAAGTTTCTTAT+TGG	0.165681	1_3:-45409915	Msa0120490:CDS
ATAGATCAAAAGAGAAAATT+AGG	0.203818	1_3:-45410010	Msa0120490:CDS
GGCTTAAACTCTAAACAATT+TGG	0.209541	1_3:+45409554	None:intergenic
TTAGAAGCTGAACAAGTAAT+TGG	0.218363	1_3:-45409809	Msa0120490:CDS
TTCAAAGGCAAAAGATCTTA+TGG	0.272569	1_3:+45410363	None:intergenic
TGGTTGTGTCTCCAATAATT+TGG	0.275694	1_3:-45410117	Msa0120490:CDS
AAACAACTTGGTCTAGGTTT+TGG	0.292314	1_3:+45410293	None:intergenic
CATCACTCACAAGTTTCTTT+TGG	0.296519	1_3:-45409871	Msa0120490:CDS
TGGTAAAGAAATGGCTTTGA+TGG	0.321781	1_3:-45409447	Msa0120490:CDS
AACTTTGAATCAAATTGAAT+TGG	0.350752	1_3:+45409680	None:intergenic
AAAATCTCTTTCTCAACTTC+AGG	0.350972	1_3:+45409833	None:intergenic
TAGAAAGTTTCATATTGAAT+TGG	0.372190	1_3:-45409396	Msa0120490:CDS
CCATCTTTCAACCACCTTTG+AGG	0.373622	1_3:+45409533	None:intergenic
TTGGAAGATACAATGTTTCA+TGG	0.380597	1_3:-45409377	Msa0120490:CDS
CAAAAGTGAAAAGTGGTACT+AGG	0.385250	1_3:-45409625	Msa0120490:CDS
GTCATAAGTTTCTTATTGGC+TGG	0.416268	1_3:-45409911	Msa0120490:CDS
TTTGAATCAAATTGAATTGG+TGG	0.416454	1_3:+45409683	None:intergenic
GGGTAGGTTGGAGGAATTGT+GGG	0.420190	1_3:-45409579	Msa0120490:CDS
GTTAGTCCAGGAGAGAATCT+TGG	0.423157	1_3:+45409350	None:intergenic
GGTTTGTATTGGTAAAGAAA+TGG	0.442275	1_3:-45409456	Msa0120490:CDS
TTTCAACATGGGTAGTGAAA+AGG	0.453208	1_3:-45410080	Msa0120490:CDS
ACTTATCATCCTTATGCAAT+GGG	0.453213	1_3:-45409599	Msa0120490:CDS
TCCTTATGCAATGGGTAGGT+TGG	0.456873	1_3:-45409591	Msa0120490:CDS
GCTGGGTTAAGGGTTTGTAT+TGG	0.467958	1_3:-45409467	Msa0120490:CDS
TTAGTCCAGGAGAGAATCTT+GGG	0.473412	1_3:+45409351	None:intergenic
CCTCTAGGACGAACAAATAC+AGG	0.475960	1_3:+45409305	None:intergenic
TACTTATCATCCTTATGCAA+TGG	0.476335	1_3:-45409600	Msa0120490:CDS
GGGTACTTGAATTGATTTGA+AGG	0.477164	1_3:+45409500	None:intergenic
TGGGTAGGTTGGAGGAATTG+TGG	0.477692	1_3:-45409580	Msa0120490:CDS
AGCAAAATCCGACATGGGTA+AGG	0.479551	1_3:+45410183	None:intergenic
TTGACAACAAATCTTTGTGA+TGG	0.482486	1_3:+45409981	None:intergenic
AGTAGTACGGATTATTCAGT+TGG	0.488093	1_3:+45409280	None:intergenic
TCCAACCTACCCATTGCATA+AGG	0.492093	1_3:+45409590	None:intergenic
GTAGAGGGATGAGTCGATGT+TGG	0.496220	1_3:+45410323	None:intergenic
GCAAAAGTGGCAGTTAGTCC+AGG	0.508151	1_3:+45409338	None:intergenic
TTCGTTGTTGACAACTTCAA+AGG	0.528287	1_3:+45410348	None:intergenic
CCTCAAAGGTGGTTGAAAGA+TGG	0.529001	1_3:-45409533	Msa0120490:CDS
GTTTAGAGTTTAAGCCTCAA+AGG	0.530039	1_3:-45409547	Msa0120490:CDS
GGTAACCCAAGATTCTCTCC+TGG	0.530666	1_3:-45409356	Msa0120490:CDS
TGACAACAAATCTTTGTGAT+GGG	0.536494	1_3:+45409982	None:intergenic
TTATGCAATGGGTAGGTTGG+AGG	0.537294	1_3:-45409588	Msa0120490:CDS
CCTGTATTTGTTCGTCCTAG+AGG	0.538130	1_3:-45409305	Msa0120490:CDS
ATTATTCAGTTGGTTCCTCT+AGG	0.543249	1_3:+45409290	None:intergenic
AGGAAGACCAAAAGCAAAAG+TGG	0.548305	1_3:+45409325	None:intergenic
AAGGATGTTTCTAGACACAT+AGG	0.557282	1_3:+45410202	None:intergenic
AAAAGTGAAAAGTGGTACTA+GGG	0.561980	1_3:-45409624	Msa0120490:CDS
GATGGTACAAAAGTGAAAAG+TGG	0.569047	1_3:-45409632	Msa0120490:CDS
ACACATAGGGTCTAAACCAA+AGG	0.600563	1_3:+45410216	None:intergenic
AGAAAGAGCAAAATCCGACA+TGG	0.604355	1_3:+45410177	None:intergenic
ATCATCCTTATGCAATGGGT+AGG	0.614986	1_3:-45409595	Msa0120490:CDS
AGAAACATCCTTACCCATGT+CGG	0.620375	1_3:-45410191	Msa0120490:CDS
ATTATCAGCTGAAAGAGCCA+TGG	0.623137	1_3:-45410137	Msa0120490:CDS
AGGATGTTTCTAGACACATA+GGG	0.642200	1_3:+45410203	None:intergenic
GAAAGAGCAAAATCCGACAT+GGG	0.650354	1_3:+45410178	None:intergenic
TAGAGTTTAAGCCTCAAAGG+TGG	0.653219	1_3:-45409544	Msa0120490:CDS
TTTGATGGAACTTAAAACTG+TGG	0.662676	1_3:-45409432	Msa0120490:CDS
ACTTGTGAGTGATGATGCCA+CGG	0.691784	1_3:+45409880	None:intergenic
AATTATTGGAGACACAACCA+TGG	0.692792	1_3:+45410120	None:intergenic
GGTAGGTTGGAGGAATTGTG+GGG	0.700238	1_3:-45409578	Msa0120490:CDS
ATTGGCTGGTCGTGACACCG+TGG	0.708219	1_3:-45409897	Msa0120490:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATGATGAAAAAAATAATTA+TGG	-	chr1_3:45409907-45409926	Msa0120490:CDS	15.0%
!!	GATGATGAAAAAAATAATTA+TGG	-	chr1_3:45409907-45409926	Msa0120490:CDS	15.0%
!!!	ATCAAAAGATTTTTCAACAT+GGG	-	chr1_3:45409595-45409614	Msa0120490:CDS	20.0%
!!	ATAGATCAAAAGAGAAAATT+AGG	-	chr1_3:45409676-45409695	Msa0120490:CDS	20.0%
!!	AACTTTGAATCAAATTGAAT+TGG	+	chr1_3:45410009-45410028	None:intergenic	20.0%
!!!	ATTTGATTCAAAGTTTTGTT+TGG	-	chr1_3:45410014-45410033	Msa0120490:CDS	20.0%
!!	TAGAAAGTTTCATATTGAAT+TGG	-	chr1_3:45410290-45410309	Msa0120490:CDS	20.0%
!!!	ATCAAAAGATTTTTCAACAT+GGG	-	chr1_3:45409595-45409614	Msa0120490:CDS	20.0%
!!	ATAGATCAAAAGAGAAAATT+AGG	-	chr1_3:45409676-45409695	Msa0120490:CDS	20.0%
!!	AACTTTGAATCAAATTGAAT+TGG	+	chr1_3:45410009-45410028	None:intergenic	20.0%
!!!	ATTTGATTCAAAGTTTTGTT+TGG	-	chr1_3:45410014-45410033	Msa0120490:CDS	20.0%
!!	TAGAAAGTTTCATATTGAAT+TGG	-	chr1_3:45410290-45410309	Msa0120490:CDS	20.0%
!!	AGTATTTGTAGATTTTCCTT+TGG	-	chr1_3:45409454-45409473	Msa0120490:CDS	25.0%
!!	CTTTTGATCTTCCAAATTAT+TGG	+	chr1_3:45409583-45409602	None:intergenic	25.0%
!!!	GATCAAAAGATTTTTCAACA+TGG	-	chr1_3:45409594-45409613	Msa0120490:CDS	25.0%
!	CATAGTCATAAGTTTCTTAT+TGG	-	chr1_3:45409771-45409790	Msa0120490:CDS	25.0%
!!!	TTATTTTTTTCATCATCACG+TGG	+	chr1_3:45409904-45409923	None:intergenic	25.0%
!!	TAACGAATTTTGAACAACTT+AGG	-	chr1_3:45409932-45409951	Msa0120490:CDS	25.0%
!	TTTGAATCAAATTGAATTGG+TGG	+	chr1_3:45410006-45410025	None:intergenic	25.0%
!!	AGTATTTGTAGATTTTCCTT+TGG	-	chr1_3:45409454-45409473	Msa0120490:CDS	25.0%
!!	CTTTTGATCTTCCAAATTAT+TGG	+	chr1_3:45409583-45409602	None:intergenic	25.0%
!!!	GATCAAAAGATTTTTCAACA+TGG	-	chr1_3:45409594-45409613	Msa0120490:CDS	25.0%
!	CATAGTCATAAGTTTCTTAT+TGG	-	chr1_3:45409771-45409790	Msa0120490:CDS	25.0%
!!!	TTATTTTTTTCATCATCACG+TGG	+	chr1_3:45409904-45409923	None:intergenic	25.0%
!!	TAACGAATTTTGAACAACTT+AGG	-	chr1_3:45409932-45409951	Msa0120490:CDS	25.0%
!	TTTGAATCAAATTGAATTGG+TGG	+	chr1_3:45410006-45410025	None:intergenic	25.0%
	TTCAAAGGCAAAAGATCTTA+TGG	+	chr1_3:45409326-45409345	None:intergenic	30.0%
	AATCAAAAACAACTTGGTCT+AGG	+	chr1_3:45409402-45409421	None:intergenic	30.0%
	CTTGCAAATCAAAAACAACT+TGG	+	chr1_3:45409408-45409427	None:intergenic	30.0%
	TGACAACAAATCTTTGTGAT+GGG	+	chr1_3:45409707-45409726	None:intergenic	30.0%
	TTGACAACAAATCTTTGTGA+TGG	+	chr1_3:45409708-45409727	None:intergenic	30.0%
	AAAATCTCTTTCTCAACTTC+AGG	+	chr1_3:45409856-45409875	None:intergenic	30.0%
	TTAGAAGCTGAACAAGTAAT+TGG	-	chr1_3:45409877-45409896	Msa0120490:CDS	30.0%
	AAAAGTGAAAAGTGGTACTA+GGG	-	chr1_3:45410062-45410081	Msa0120490:CDS	30.0%
	TACTTATCATCCTTATGCAA+TGG	-	chr1_3:45410086-45410105	Msa0120490:CDS	30.0%
	ACTTATCATCCTTATGCAAT+GGG	-	chr1_3:45410087-45410106	Msa0120490:CDS	30.0%
	GGCTTAAACTCTAAACAATT+TGG	+	chr1_3:45410135-45410154	None:intergenic	30.0%
	TTAACCCAGCTTGAAAAATA+GGG	+	chr1_3:45410209-45410228	None:intergenic	30.0%
!!!	TATTTTTCAAGCTGGGTTAA+GGG	-	chr1_3:45410209-45410228	Msa0120490:CDS	30.0%
!	GGTTTGTATTGGTAAAGAAA+TGG	-	chr1_3:45410230-45410249	Msa0120490:CDS	30.0%
	TTTGATGGAACTTAAAACTG+TGG	-	chr1_3:45410254-45410273	Msa0120490:CDS	30.0%
	TTGGAAGATACAATGTTTCA+TGG	-	chr1_3:45410309-45410328	Msa0120490:CDS	30.0%
	TTCAAAGGCAAAAGATCTTA+TGG	+	chr1_3:45409326-45409345	None:intergenic	30.0%
	AATCAAAAACAACTTGGTCT+AGG	+	chr1_3:45409402-45409421	None:intergenic	30.0%
	CTTGCAAATCAAAAACAACT+TGG	+	chr1_3:45409408-45409427	None:intergenic	30.0%
	TGACAACAAATCTTTGTGAT+GGG	+	chr1_3:45409707-45409726	None:intergenic	30.0%
	TTGACAACAAATCTTTGTGA+TGG	+	chr1_3:45409708-45409727	None:intergenic	30.0%
	AAAATCTCTTTCTCAACTTC+AGG	+	chr1_3:45409856-45409875	None:intergenic	30.0%
	TTAGAAGCTGAACAAGTAAT+TGG	-	chr1_3:45409877-45409896	Msa0120490:CDS	30.0%
	AAAAGTGAAAAGTGGTACTA+GGG	-	chr1_3:45410062-45410081	Msa0120490:CDS	30.0%
	TACTTATCATCCTTATGCAA+TGG	-	chr1_3:45410086-45410105	Msa0120490:CDS	30.0%
	ACTTATCATCCTTATGCAAT+GGG	-	chr1_3:45410087-45410106	Msa0120490:CDS	30.0%
	GGCTTAAACTCTAAACAATT+TGG	+	chr1_3:45410135-45410154	None:intergenic	30.0%
	TTAACCCAGCTTGAAAAATA+GGG	+	chr1_3:45410209-45410228	None:intergenic	30.0%
!!!	TATTTTTCAAGCTGGGTTAA+GGG	-	chr1_3:45410209-45410228	Msa0120490:CDS	30.0%
!	GGTTTGTATTGGTAAAGAAA+TGG	-	chr1_3:45410230-45410249	Msa0120490:CDS	30.0%
	TTTGATGGAACTTAAAACTG+TGG	-	chr1_3:45410254-45410273	Msa0120490:CDS	30.0%
	TTGGAAGATACAATGTTTCA+TGG	-	chr1_3:45410309-45410328	Msa0120490:CDS	30.0%
	TTCGTTGTTGACAACTTCAA+AGG	+	chr1_3:45409341-45409360	None:intergenic	35.0%
!	AAACAACTTGGTCTAGGTTT+TGG	+	chr1_3:45409396-45409415	None:intergenic	35.0%
!!	AGGATGTTTCTAGACACATA+GGG	+	chr1_3:45409486-45409505	None:intergenic	35.0%
!!	AAGGATGTTTCTAGACACAT+AGG	+	chr1_3:45409487-45409506	None:intergenic	35.0%
	AATTATTGGAGACACAACCA+TGG	+	chr1_3:45409569-45409588	None:intergenic	35.0%
	TGGTTGTGTCTCCAATAATT+TGG	-	chr1_3:45409569-45409588	Msa0120490:CDS	35.0%
	TTTCAACATGGGTAGTGAAA+AGG	-	chr1_3:45409606-45409625	Msa0120490:CDS	35.0%
	GTCATAAGTTTCTTATTGGC+TGG	-	chr1_3:45409775-45409794	Msa0120490:CDS	35.0%
!	CATCACTCACAAGTTTCTTT+TGG	-	chr1_3:45409815-45409834	Msa0120490:CDS	35.0%
!!	GATGATGATGTTTTACCAGA+TGG	-	chr1_3:45410036-45410055	Msa0120490:CDS	35.0%
!!	CTTTTCACTTTTGTACCATC+TGG	+	chr1_3:45410054-45410073	None:intergenic	35.0%
	GATGGTACAAAAGTGAAAAG+TGG	-	chr1_3:45410054-45410073	Msa0120490:CDS	35.0%
	CAAAAGTGAAAAGTGGTACT+AGG	-	chr1_3:45410061-45410080	Msa0120490:CDS	35.0%
!	GTTTAGAGTTTAAGCCTCAA+AGG	-	chr1_3:45410139-45410158	Msa0120490:CDS	35.0%
!!	GGGTACTTGAATTGATTTGA+AGG	+	chr1_3:45410189-45410208	None:intergenic	35.0%
!!!	AAGTACCCTATTTTTCAAGC+TGG	-	chr1_3:45410201-45410220	Msa0120490:CDS	35.0%
!!!	AGTACCCTATTTTTCAAGCT+GGG	-	chr1_3:45410202-45410221	Msa0120490:CDS	35.0%
	CTTAACCCAGCTTGAAAAAT+AGG	+	chr1_3:45410210-45410229	None:intergenic	35.0%
!!!	CTATTTTTCAAGCTGGGTTA+AGG	-	chr1_3:45410208-45410227	Msa0120490:CDS	35.0%
!!	TGGTAAAGAAATGGCTTTGA+TGG	-	chr1_3:45410239-45410258	Msa0120490:CDS	35.0%
	TTCGTTGTTGACAACTTCAA+AGG	+	chr1_3:45409341-45409360	None:intergenic	35.0%
!	AAACAACTTGGTCTAGGTTT+TGG	+	chr1_3:45409396-45409415	None:intergenic	35.0%
!!	AGGATGTTTCTAGACACATA+GGG	+	chr1_3:45409486-45409505	None:intergenic	35.0%
!!	AAGGATGTTTCTAGACACAT+AGG	+	chr1_3:45409487-45409506	None:intergenic	35.0%
	AATTATTGGAGACACAACCA+TGG	+	chr1_3:45409569-45409588	None:intergenic	35.0%
	TGGTTGTGTCTCCAATAATT+TGG	-	chr1_3:45409569-45409588	Msa0120490:CDS	35.0%
	TTTCAACATGGGTAGTGAAA+AGG	-	chr1_3:45409606-45409625	Msa0120490:CDS	35.0%
	GTCATAAGTTTCTTATTGGC+TGG	-	chr1_3:45409775-45409794	Msa0120490:CDS	35.0%
!	CATCACTCACAAGTTTCTTT+TGG	-	chr1_3:45409815-45409834	Msa0120490:CDS	35.0%
!!	GATGATGATGTTTTACCAGA+TGG	-	chr1_3:45410036-45410055	Msa0120490:CDS	35.0%
!!	CTTTTCACTTTTGTACCATC+TGG	+	chr1_3:45410054-45410073	None:intergenic	35.0%
	GATGGTACAAAAGTGAAAAG+TGG	-	chr1_3:45410054-45410073	Msa0120490:CDS	35.0%
	CAAAAGTGAAAAGTGGTACT+AGG	-	chr1_3:45410061-45410080	Msa0120490:CDS	35.0%
!	GTTTAGAGTTTAAGCCTCAA+AGG	-	chr1_3:45410139-45410158	Msa0120490:CDS	35.0%
!!	GGGTACTTGAATTGATTTGA+AGG	+	chr1_3:45410189-45410208	None:intergenic	35.0%
!!!	AAGTACCCTATTTTTCAAGC+TGG	-	chr1_3:45410201-45410220	Msa0120490:CDS	35.0%
!!!	AGTACCCTATTTTTCAAGCT+GGG	-	chr1_3:45410202-45410221	Msa0120490:CDS	35.0%
	CTTAACCCAGCTTGAAAAAT+AGG	+	chr1_3:45410210-45410229	None:intergenic	35.0%
!!!	CTATTTTTCAAGCTGGGTTA+AGG	-	chr1_3:45410208-45410227	Msa0120490:CDS	35.0%
!!	TGGTAAAGAAATGGCTTTGA+TGG	-	chr1_3:45410239-45410258	Msa0120490:CDS	35.0%
!!!	GGTTTTGGTTTTGGAGTAGA+GGG	+	chr1_3:45409381-45409400	None:intergenic	40.0%
!!!	AGGTTTTGGTTTTGGAGTAG+AGG	+	chr1_3:45409382-45409401	None:intergenic	40.0%
!!!	CTTGGTCTAGGTTTTGGTTT+TGG	+	chr1_3:45409390-45409409	None:intergenic	40.0%
	ACACATAGGGTCTAAACCAA+AGG	+	chr1_3:45409473-45409492	None:intergenic	40.0%
	AGAAACATCCTTACCCATGT+CGG	-	chr1_3:45409495-45409514	Msa0120490:CDS	40.0%
	GAAAGAGCAAAATCCGACAT+GGG	+	chr1_3:45409511-45409530	None:intergenic	40.0%
	AGAAAGAGCAAAATCCGACA+TGG	+	chr1_3:45409512-45409531	None:intergenic	40.0%
	ATTATCAGCTGAAAGAGCCA+TGG	-	chr1_3:45409549-45409568	Msa0120490:CDS	40.0%
	ATCATCCTTATGCAATGGGT+AGG	-	chr1_3:45410091-45410110	Msa0120490:CDS	40.0%
	TAGAGTTTAAGCCTCAAAGG+TGG	-	chr1_3:45410142-45410161	Msa0120490:CDS	40.0%
	TTAGTCCAGGAGAGAATCTT+GGG	+	chr1_3:45410338-45410357	None:intergenic	40.0%
!!!	CTAACTGCCACTTTTGCTTT+TGG	-	chr1_3:45410354-45410373	Msa0120490:CDS	40.0%
	AGGAAGACCAAAAGCAAAAG+TGG	+	chr1_3:45410364-45410383	None:intergenic	40.0%
!!!	GGTTTTGGTTTTGGAGTAGA+GGG	+	chr1_3:45409381-45409400	None:intergenic	40.0%
!!!	AGGTTTTGGTTTTGGAGTAG+AGG	+	chr1_3:45409382-45409401	None:intergenic	40.0%
!!!	CTTGGTCTAGGTTTTGGTTT+TGG	+	chr1_3:45409390-45409409	None:intergenic	40.0%
	ACACATAGGGTCTAAACCAA+AGG	+	chr1_3:45409473-45409492	None:intergenic	40.0%
	AGAAACATCCTTACCCATGT+CGG	-	chr1_3:45409495-45409514	Msa0120490:CDS	40.0%
	GAAAGAGCAAAATCCGACAT+GGG	+	chr1_3:45409511-45409530	None:intergenic	40.0%
	AGAAAGAGCAAAATCCGACA+TGG	+	chr1_3:45409512-45409531	None:intergenic	40.0%
	ATTATCAGCTGAAAGAGCCA+TGG	-	chr1_3:45409549-45409568	Msa0120490:CDS	40.0%
	ATCATCCTTATGCAATGGGT+AGG	-	chr1_3:45410091-45410110	Msa0120490:CDS	40.0%
	TAGAGTTTAAGCCTCAAAGG+TGG	-	chr1_3:45410142-45410161	Msa0120490:CDS	40.0%
	TTAGTCCAGGAGAGAATCTT+GGG	+	chr1_3:45410338-45410357	None:intergenic	40.0%
!!!	CTAACTGCCACTTTTGCTTT+TGG	-	chr1_3:45410354-45410373	Msa0120490:CDS	40.0%
	AGGAAGACCAAAAGCAAAAG+TGG	+	chr1_3:45410364-45410383	None:intergenic	40.0%
	AGCAAAATCCGACATGGGTA+AGG	+	chr1_3:45409506-45409525	None:intergenic	45.0%
!	ACTTGTGAGTGATGATGCCA+CGG	+	chr1_3:45409809-45409828	None:intergenic	45.0%
	TCCTTATGCAATGGGTAGGT+TGG	-	chr1_3:45410095-45410114	Msa0120490:CDS	45.0%
	TCCAACCTACCCATTGCATA+AGG	+	chr1_3:45410099-45410118	None:intergenic	45.0%
!	TTATGCAATGGGTAGGTTGG+AGG	-	chr1_3:45410098-45410117	Msa0120490:CDS	45.0%
	CCATCTTTCAACCACCTTTG+AGG	+	chr1_3:45410156-45410175	None:intergenic	45.0%
	CCTCAAAGGTGGTTGAAAGA+TGG	-	chr1_3:45410153-45410172	Msa0120490:CDS	45.0%
	GCTGGGTTAAGGGTTTGTAT+TGG	-	chr1_3:45410219-45410238	Msa0120490:CDS	45.0%
	GTTAGTCCAGGAGAGAATCT+TGG	+	chr1_3:45410339-45410358	None:intergenic	45.0%
!!	CCTCTAGGACGAACAAATAC+AGG	+	chr1_3:45410384-45410403	None:intergenic	45.0%
	CCTGTATTTGTTCGTCCTAG+AGG	-	chr1_3:45410381-45410400	Msa0120490:CDS	45.0%
	AGCAAAATCCGACATGGGTA+AGG	+	chr1_3:45409506-45409525	None:intergenic	45.0%
!	ACTTGTGAGTGATGATGCCA+CGG	+	chr1_3:45409809-45409828	None:intergenic	45.0%
	TCCTTATGCAATGGGTAGGT+TGG	-	chr1_3:45410095-45410114	Msa0120490:CDS	45.0%
	TCCAACCTACCCATTGCATA+AGG	+	chr1_3:45410099-45410118	None:intergenic	45.0%
!	TTATGCAATGGGTAGGTTGG+AGG	-	chr1_3:45410098-45410117	Msa0120490:CDS	45.0%
	CCATCTTTCAACCACCTTTG+AGG	+	chr1_3:45410156-45410175	None:intergenic	45.0%
	CCTCAAAGGTGGTTGAAAGA+TGG	-	chr1_3:45410153-45410172	Msa0120490:CDS	45.0%
	GCTGGGTTAAGGGTTTGTAT+TGG	-	chr1_3:45410219-45410238	Msa0120490:CDS	45.0%
	GTTAGTCCAGGAGAGAATCT+TGG	+	chr1_3:45410339-45410358	None:intergenic	45.0%
!!	CCTCTAGGACGAACAAATAC+AGG	+	chr1_3:45410384-45410403	None:intergenic	45.0%
	CCTGTATTTGTTCGTCCTAG+AGG	-	chr1_3:45410381-45410400	Msa0120490:CDS	45.0%
	GTAGAGGGATGAGTCGATGT+TGG	+	chr1_3:45409366-45409385	None:intergenic	50.0%
!	TGGGTAGGTTGGAGGAATTG+TGG	-	chr1_3:45410106-45410125	Msa0120490:CDS	50.0%
!	GGGTAGGTTGGAGGAATTGT+GGG	-	chr1_3:45410107-45410126	Msa0120490:CDS	50.0%
!	GGTAGGTTGGAGGAATTGTG+GGG	-	chr1_3:45410108-45410127	Msa0120490:CDS	50.0%
	GGTAACCCAAGATTCTCTCC+TGG	-	chr1_3:45410330-45410349	Msa0120490:CDS	50.0%
	GCAAAAGTGGCAGTTAGTCC+AGG	+	chr1_3:45410351-45410370	None:intergenic	50.0%
	GTAGAGGGATGAGTCGATGT+TGG	+	chr1_3:45409366-45409385	None:intergenic	50.0%
!	TGGGTAGGTTGGAGGAATTG+TGG	-	chr1_3:45410106-45410125	Msa0120490:CDS	50.0%
!	GGGTAGGTTGGAGGAATTGT+GGG	-	chr1_3:45410107-45410126	Msa0120490:CDS	50.0%
!	GGTAGGTTGGAGGAATTGTG+GGG	-	chr1_3:45410108-45410127	Msa0120490:CDS	50.0%
	GGTAACCCAAGATTCTCTCC+TGG	-	chr1_3:45410330-45410349	Msa0120490:CDS	50.0%
	GCAAAAGTGGCAGTTAGTCC+AGG	+	chr1_3:45410351-45410370	None:intergenic	50.0%
!	ATTGGCTGGTCGTGACACCG+TGG	-	chr1_3:45409789-45409808	Msa0120490:CDS	60.0%
!	ATTGGCTGGTCGTGACACCG+TGG	-	chr1_3:45409789-45409808	Msa0120490:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	45409295	45410413	45409295	ID=Msa0120490;Name=Msa0120490
chr1_3	mRNA	45409295	45410413	45409295	ID=Msa0120490-mRNA-1;Parent=Msa0120490;Name=Msa0120490-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|372
chr1_3	exon	45409295	45410413	45409295	ID=Msa0120490-mRNA-1:exon:13636;Parent=Msa0120490-mRNA-1
chr1_3	CDS	45409295	45410413	45409295	ID=Msa0120490-mRNA-1:cds;Parent=Msa0120490-mRNA-1

Gene Sequence

>Msa0120490

ATGGCAAGTTTAGAACTCAACAAACAATCCATAAGATCTTTTGCCTTTGAAGTTGTCAACAACGAAATCCAACATCGACTCATCCCTCTACTCCAAAACCAAAACCTAGACCAAGTTGTTTTTGATTTGCAAGATGTTTTCAAAAGATTCTCTTTTGATAGTATTTGTAGATTTTCCTTTGGTTTAGACCCTATGTGTCTAGAAACATCCTTACCCATGTCGGATTTTGCTCTTTCTTTTGATTTAGCATCAAAATTATCAGCTGAAAGAGCCATGGTTGTGTCTCCAATAATTTGGAAGATCAAAAGATTTTTCAACATGGGTAGTGAAAAGGAGTTAAAAAAAAGTATTAGCATCATTAATATGTTAGCAAAAGTTGTTATAGATCAAAAGAGAAAATTAGGTTTTTCCCATCACAAAGATTTGTTGTCAAGATTCATGAGTACTACAATTCATGATGACATGTTTCTTAGAGACATAGTCATAAGTTTCTTATTGGCTGGTCGTGACACCGTGGCATCATCACTCACAAGTTTCTTTTGGTTATTAGCGAAAAATCCTGAAGTTGAGAAAGAGATTTTGTTAGAAGCTGAACAAGTAATTGGACCACGTGATGATGAAAAAAATAATTATGGTGTAACGAATTTTGAACAACTTAGGAAGTTGCATTATTTACAAGCTGCAGCACATGAAAGTATGAGACTTTATCCACCAATTCAATTTGATTCAAAGTTTTGTTTGGATGATGATGTTTTACCAGATGGTACAAAAGTGAAAAGTGGTACTAGGGTTACTTATCATCCTTATGCAATGGGTAGGTTGGAGGAATTGTGGGGTCCAAATTGTTTAGAGTTTAAGCCTCAAAGGTGGTTGAAAGATGGTGTGTTTCAACCTTCAAATCAATTCAAGTACCCTATTTTTCAAGCTGGGTTAAGGGTTTGTATTGGTAAAGAAATGGCTTTGATGGAACTTAAAACTGTGGCAATTTCTTTGCTTAGAAAGTTTCATATTGAATTGGAAGATACAATGTTTCATGGTAACCCAAGATTCTCTCCTGGACTAACTGCCACTTTTGCTTTTGGTCTTCCTGTATTTGTTCGTCCTAGAGGAACCAACTGA

Protein sequence

>Msa0120490

MASLELNKQSIRSFAFEVVNNEIQHRLIPLLQNQNLDQVVFDLQDVFKRFSFDSICRFSFGLDPMCLETSLPMSDFALSFDLASKLSAERAMVVSPIIWKIKRFFNMGSEKELKKSISIINMLAKVVIDQKRKLGFSHHKDLLSRFMSTTIHDDMFLRDIVISFLLAGRDTVASSLTSFFWLLAKNPEVEKEILLEAEQVIGPRDDEKNNYGVTNFEQLRKLHYLQAAAHESMRLYPPIQFDSKFCLDDDVLPDGTKVKSGTRVTYHPYAMGRLEELWGPNCLEFKPQRWLKDGVFQPSNQFKYPIFQAGLRVCIGKEMALMELKTVAISLLRKFHIELEDTMFHGNPRFSPGLTATFAFGLPVFVRPRGTN*