AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0129880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129880 MtrunA17_Chr1g0197041 97.872 235 4 1 1 234 1 235 2.45e-168 463
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129880 AT3G10640.1 80.591 237 41 3 1 234 1 235 3.32e-139 390
Msa0129880 AT5G04850.1 79.325 237 44 3 1 234 1 235 3.06e-134 377
Msa0129880 AT5G04850.2 68.613 274 44 4 1 234 1 272 6.93e-127 360
Msa0129880 AT3G10640.2 83.140 172 25 2 65 234 1 170 4.48e-102 293
Msa0129880 AT4G29160.2 32.680 153 88 2 61 213 29 166 8.28e-12 62.4
Msa0129880 AT4G29160.1 30.516 213 127 4 1 213 2 193 9.23e-12 62.8
Msa0129880 AT4G29160.3 30.516 213 127 4 1 213 2 193 9.23e-12 62.8

Find 80 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAATCAGATTCTTTATC+AGG 0.233934 1_3:+59947930 None:intergenic
CATCGACGAGGAGGATCTTA+TGG 0.279324 1_3:-59948771 Msa0129880:CDS
CCTGACGATTTATCACATTC+AGG 0.292283 1_3:+59946878 None:intergenic
TAAATGTGAAAATTTATATC+AGG 0.303531 1_3:+59946927 None:intergenic
CAGGATTCAGACAATAAAAT+TGG 0.309321 1_3:+59946946 None:intergenic
CTTCGGTGTCAAAGCGAAAA+AGG 0.331507 1_3:-59950623 Msa0129880:CDS
TTTCATTGGCATTATTTGTA+AGG 0.378844 1_3:-59947050 Msa0129880:three_prime_UTR
GATTAATACAGTGATTTCAT+TGG 0.381933 1_3:-59947064 Msa0129880:three_prime_UTR
TAATGAAATCCAAGAGACTT+TGG 0.390086 1_3:-59948819 Msa0129880:CDS
CATTCCCTTCAAATCCTTGT+TGG 0.392968 1_3:+59948993 None:intergenic
CCGACAGACTGAAGATGAAC+TGG 0.394056 1_3:-59947205 Msa0129880:intron
CGCGCAATCAAATAAAATAT+CGG 0.398570 1_3:-59950849 Msa0129880:five_prime_UTR
AGCTTCTACCCAAAGTCTCT+TGG 0.398583 1_3:+59948810 None:intergenic
AGGAAATTTCAACAGAAGTA+AGG 0.402977 1_3:-59946858 Msa0129880:three_prime_UTR
TGGGTTTACCTGCCGTCCCT+CGG 0.414093 1_3:-59947185 Msa0129880:CDS
TTTCATTACTTACATCCATC+AGG 0.427532 1_3:+59948834 None:intergenic
TCCTCCTCGTCGATGTCATC+AGG 0.434266 1_3:+59948779 None:intergenic
TCGTTGGCATCTTCAATTGA+AGG 0.438755 1_3:+59950592 None:intergenic
GTCTGCCAACAAGGATTTGA+AGG 0.438864 1_3:-59948998 Msa0129880:CDS
AATGAAATCCAAGAGACTTT+GGG 0.447441 1_3:-59948818 Msa0129880:CDS
AATCAGATTCTTTATCAGGT+TGG 0.452686 1_3:+59947934 None:intergenic
GGAAATTTATTATCGATGCT+TGG 0.453252 1_3:-59947029 Msa0129880:three_prime_UTR
ATCCACCGTATCACCTCGTT+TGG 0.462590 1_3:+59950429 None:intergenic
AAGCATTCTTTAACCGCGTA+GGG 0.466111 1_3:+59947158 None:intergenic
CTGACGATTTATCACATTCA+GGG 0.472461 1_3:+59946879 None:intergenic
ATCGACGAGGAGGATCTTAT+GGG 0.475067 1_3:-59948770 Msa0129880:CDS
GCTTTAACAGCATCCTGAGC+AGG 0.479670 1_3:+59950340 None:intergenic
CCTGAATGTGATAAATCGTC+AGG 0.482833 1_3:-59946878 Msa0129880:three_prime_UTR
GGGTTTACCTGCCGTCCCTC+GGG 0.486431 1_3:-59947184 Msa0129880:CDS
AACTTGCCTTCAGCTCCTAC+AGG 0.489113 1_3:-59947897 Msa0129880:CDS
AATGAAGATTACCCTTTCGT+TGG 0.491078 1_3:+59950576 None:intergenic
AAGTTCTGCACAACTTTACA+AGG 0.491817 1_3:+59947096 None:intergenic
AGGGATGCCCGAGGGACGGC+AGG 0.500238 1_3:+59947177 None:intergenic
TTTATCAGGTTGGAGGTAGG+AGG 0.503770 1_3:+59947944 None:intergenic
AGAACGATGAAAAGAGTCTT+CGG 0.509616 1_3:-59950640 Msa0129880:exon
AAAATACTATACTTGGGCAT+TGG 0.517242 1_3:+59947848 None:intergenic
TTATCAGGTTGGAGGTAGGA+GGG 0.518537 1_3:+59947945 None:intergenic
GGCACTGCTGTTTGTCCTGT+AGG 0.519360 1_3:+59947882 None:intergenic
CAATACATACATCAATGTCT+TGG 0.524751 1_3:+59948953 None:intergenic
CAGATTCTTTATCAGGTTGG+AGG 0.526555 1_3:+59947937 None:intergenic
GAAAACAAGAGGTCCTGCTC+AGG 0.533129 1_3:-59950353 Msa0129880:CDS
TCAAGTTCAATTTGCTGCTG+AGG 0.536077 1_3:-59949949 Msa0129880:CDS
CAAGTTCAATTTGCTGCTGA+GGG 0.536695 1_3:-59949948 Msa0129880:CDS
TGATGCGCTGGAAGCAGACA+TGG 0.537841 1_3:-59947988 Msa0129880:CDS
GGAAATTTCAACAGAAGTAA+GGG 0.539166 1_3:-59946857 Msa0129880:three_prime_UTR
AATATCAGAACTTGATGCGC+TGG 0.539766 1_3:-59948000 Msa0129880:intron
GGCATCTTCAATTGAAGGAG+GGG 0.540302 1_3:+59950597 None:intergenic
GCATCTTCAATTGAAGGAGG+GGG 0.543813 1_3:+59950598 None:intergenic
GATTACCAAACGAGGTGATA+CGG 0.551321 1_3:-59950434 Msa0129880:CDS
AGCTTTGAAGTCTGCCAACA+AGG 0.553537 1_3:-59949007 Msa0129880:CDS
CAATAAAATTGGTATGAACA+AGG 0.554653 1_3:+59946957 None:intergenic
AATTGAAGATGCCAACGAAA+GGG 0.555484 1_3:-59950587 Msa0129880:intron
GTTTGTCCTGTAGGAGCTGA+AGG 0.556059 1_3:+59947891 None:intergenic
AAAGCATTCTTTAACCGCGT+AGG 0.556093 1_3:+59947157 None:intergenic
GAACTTGCAAGATGAGATGA+TGG 0.556265 1_3:-59948858 Msa0129880:CDS
TTGGCAAACACTAGAGAACT+TGG 0.556974 1_3:-59947010 Msa0129880:three_prime_UTR
TGTTAAAGCTAGAGCCATGC+GGG 0.557000 1_3:-59950326 Msa0129880:CDS
TATCAGGTTGGAGGTAGGAG+GGG 0.561466 1_3:+59947946 None:intergenic
AGATGAGATGATGGACCTGA+TGG 0.563510 1_3:-59948849 Msa0129880:CDS
TTCAATTCAATTCAACACGA+TGG 0.566451 1_3:+59950806 None:intergenic
TTCTTTATCAGGTTGGAGGT+AGG 0.570285 1_3:+59947941 None:intergenic
TGGCATCTTCAATTGAAGGA+GGG 0.585442 1_3:+59950596 None:intergenic
GAACAGATTAAGAAAACAAG+AGG 0.585509 1_3:-59950364 Msa0129880:CDS
GCGTAGGGATGCCCGAGGGA+CGG 0.585912 1_3:+59947173 None:intergenic
CAATTGAAGATGCCAACGAA+AGG 0.586032 1_3:-59950588 Msa0129880:CDS
TTGGCATCTTCAATTGAAGG+AGG 0.588524 1_3:+59950595 None:intergenic
CGACAGACTGAAGATGAACT+GGG 0.592511 1_3:-59947204 Msa0129880:intron
TGGGCATTGGCTCTGCCATG+TGG 0.629906 1_3:+59947861 None:intergenic
GGACAAACAGCAGTGCCACA+TGG 0.635830 1_3:-59947876 Msa0129880:CDS
TCCTGATGACATCGACGAGG+AGG 0.637963 1_3:-59948780 Msa0129880:CDS
GACATGGAAAATGAATCTGA+AGG 0.639474 1_3:-59947972 Msa0129880:CDS
GTCCCTCGGGCATCCCTACG+CGG 0.640194 1_3:-59947171 Msa0129880:CDS
TCTGCCAACAAGGATTTGAA+GGG 0.650299 1_3:-59948997 Msa0129880:CDS
CTGTTAAAGCTAGAGCCATG+CGG 0.654277 1_3:-59950327 Msa0129880:CDS
GACGAGGAGGATCTTATGGG+TGG 0.661625 1_3:-59948767 Msa0129880:intron
TAACCGCGTAGGGATGCCCG+AGG 0.685661 1_3:+59947168 None:intergenic
TGTTTGCAGATTACCAAACG+AGG 0.686439 1_3:-59950442 Msa0129880:intron
AACCGCGTAGGGATGCCCGA+GGG 0.701525 1_3:+59947169 None:intergenic
TACCAAACGAGGTGATACGG+TGG 0.709982 1_3:-59950431 Msa0129880:CDS
TGTTCCTGATGACATCGACG+AGG 0.776963 1_3:-59948783 Msa0129880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAAATCAAATAGTTTA+TGG - chr1_3:59947934-59947953 Msa0129880:CDS 10.0%
!! TTGTTTAATAATTTATGATT+TGG - chr1_3:59948226-59948245 Msa0129880:intron 10.0%
!! TTATTAAATCAAATAGTTTA+TGG - chr1_3:59947934-59947953 Msa0129880:CDS 10.0%
!! TTGTTTAATAATTTATGATT+TGG - chr1_3:59948226-59948245 Msa0129880:intron 10.0%
!!! TTTAGTTCAACAATAAAATT+AGG + chr1_3:59947233-59947252 None:intergenic 15.0%
!! TCATAAATTATTAAACAATG+TGG + chr1_3:59948224-59948243 None:intergenic 15.0%
!!! TATCTATTGGTTTTTAAAAA+GGG + chr1_3:59948260-59948279 None:intergenic 15.0%
!! TATATACTAGAATGTTATAA+TGG + chr1_3:59948558-59948577 None:intergenic 15.0%
!!! TAATATACAATACACTTTTA+GGG - chr1_3:59949371-59949390 Msa0129880:intron 15.0%
!! TAAATGTGAAAATTTATATC+AGG + chr1_3:59950778-59950797 None:intergenic 15.0%
!!! TTTAGTTCAACAATAAAATT+AGG + chr1_3:59947233-59947252 None:intergenic 15.0%
!! TCATAAATTATTAAACAATG+TGG + chr1_3:59948224-59948243 None:intergenic 15.0%
!!! TATCTATTGGTTTTTAAAAA+GGG + chr1_3:59948260-59948279 None:intergenic 15.0%
!! TATATACTAGAATGTTATAA+TGG + chr1_3:59948558-59948577 None:intergenic 15.0%
!!! TAATATACAATACACTTTTA+GGG - chr1_3:59949371-59949390 Msa0129880:intron 15.0%
!! TAAATGTGAAAATTTATATC+AGG + chr1_3:59950778-59950797 None:intergenic 15.0%
!!! AAATATCGGTTATTTTTTTG+TGG - chr1_3:59946867-59946886 Msa0129880:three_prime_UTR 20.0%
!!! GATTCAATTTCAATTTTCAA+AGG - chr1_3:59947012-59947031 Msa0129880:three_prime_UTR 20.0%
!! TAATTTCCTTCAACTTTAAA+AGG - chr1_3:59947517-59947536 Msa0129880:intron 20.0%
!!! GTATCTATTGGTTTTTAAAA+AGG + chr1_3:59948261-59948280 None:intergenic 20.0%
!! ACCAATAGATACAAATTATT+TGG - chr1_3:59948269-59948288 Msa0129880:intron 20.0%
!!! TCCAAATAATTTGTATCTAT+TGG + chr1_3:59948273-59948292 None:intergenic 20.0%
!! TAATATTAAGAGAAATTGAC+TGG - chr1_3:59948346-59948365 Msa0129880:intron 20.0%
!! AATATTAAGAGAAATTGACT+GGG - chr1_3:59948347-59948366 Msa0129880:intron 20.0%
!! TACATAAAAGCTATAAGAAA+AGG + chr1_3:59948780-59948799 None:intergenic 20.0%
!! TACAAAATATTGTGAATTAG+AGG + chr1_3:59949160-59949179 None:intergenic 20.0%
!!! GTAATATACAATACACTTTT+AGG - chr1_3:59949370-59949389 Msa0129880:intron 20.0%
!!! AAGATAATTCTCCTTTTTTT+TGG - chr1_3:59949636-59949655 Msa0129880:intron 20.0%
!! AAGTTCAAAATACTATACTT+GGG + chr1_3:59949863-59949882 None:intergenic 20.0%
!! TAAGTTCAAAATACTATACT+TGG + chr1_3:59949864-59949883 None:intergenic 20.0%
!!! ATTGATAACAAAACAACAAA+AGG + chr1_3:59949917-59949936 None:intergenic 20.0%
!! TTATCAATATGAAAACTCAA+GGG - chr1_3:59949929-59949948 Msa0129880:CDS 20.0%
!! AGAATACAATTGTAGAAAAA+AGG + chr1_3:59950172-59950191 None:intergenic 20.0%
!!! AAGAATGCTTTTTATTTCAT+TGG - chr1_3:59950557-59950576 Msa0129880:intron 20.0%
!!! AAATATCGGTTATTTTTTTG+TGG - chr1_3:59946867-59946886 Msa0129880:three_prime_UTR 20.0%
!!! GATTCAATTTCAATTTTCAA+AGG - chr1_3:59947012-59947031 Msa0129880:three_prime_UTR 20.0%
!! TAATTTCCTTCAACTTTAAA+AGG - chr1_3:59947517-59947536 Msa0129880:intron 20.0%
!!! GTATCTATTGGTTTTTAAAA+AGG + chr1_3:59948261-59948280 None:intergenic 20.0%
!! ACCAATAGATACAAATTATT+TGG - chr1_3:59948269-59948288 Msa0129880:intron 20.0%
!!! TCCAAATAATTTGTATCTAT+TGG + chr1_3:59948273-59948292 None:intergenic 20.0%
!! TAATATTAAGAGAAATTGAC+TGG - chr1_3:59948346-59948365 Msa0129880:intron 20.0%
!! AATATTAAGAGAAATTGACT+GGG - chr1_3:59948347-59948366 Msa0129880:intron 20.0%
!! TACATAAAAGCTATAAGAAA+AGG + chr1_3:59948780-59948799 None:intergenic 20.0%
!! TACAAAATATTGTGAATTAG+AGG + chr1_3:59949160-59949179 None:intergenic 20.0%
!!! GTAATATACAATACACTTTT+AGG - chr1_3:59949370-59949389 Msa0129880:intron 20.0%
!!! AAGATAATTCTCCTTTTTTT+TGG - chr1_3:59949636-59949655 Msa0129880:intron 20.0%
!! AAGTTCAAAATACTATACTT+GGG + chr1_3:59949863-59949882 None:intergenic 20.0%
!! TAAGTTCAAAATACTATACT+TGG + chr1_3:59949864-59949883 None:intergenic 20.0%
!!! ATTGATAACAAAACAACAAA+AGG + chr1_3:59949917-59949936 None:intergenic 20.0%
!! TTATCAATATGAAAACTCAA+GGG - chr1_3:59949929-59949948 Msa0129880:CDS 20.0%
!! AGAATACAATTGTAGAAAAA+AGG + chr1_3:59950172-59950191 None:intergenic 20.0%
!!! AAGAATGCTTTTTATTTCAT+TGG - chr1_3:59950557-59950576 Msa0129880:intron 20.0%
!!! CGGTTTCTATTTTTGAATTT+AGG - chr1_3:59947196-59947215 Msa0129880:CDS 25.0%
! AATAATCAATTGAAGAAACC+CGG + chr1_3:59947428-59947447 None:intergenic 25.0%
!! ATTTTTACCTTTCAGTATGT+TGG - chr1_3:59947568-59947587 Msa0129880:intron 25.0%
! ATAATTTCTAACTGTATGCA+TGG - chr1_3:59947613-59947632 Msa0129880:intron 25.0%
! AGTGTATCACTATATGAAAA+CGG + chr1_3:59947672-59947691 None:intergenic 25.0%
! TTTGTACAAGAATATGAAGA+TGG - chr1_3:59947869-59947888 Msa0129880:CDS 25.0%
! TTATGAATAGTTATCAGAGA+GGG + chr1_3:59947975-59947994 None:intergenic 25.0%
! CTGATAACTATTCATAAGAT+TGG - chr1_3:59947978-59947997 Msa0129880:CDS 25.0%
! ATAACTATTCATAAGATTGG+TGG - chr1_3:59947981-59948000 Msa0129880:CDS 25.0%
!!! ATTTTGTGTCTTTTGTTTTG+TGG - chr1_3:59948043-59948062 Msa0129880:intron 25.0%
! ATATTAAGAGAAATTGACTG+GGG - chr1_3:59948348-59948367 Msa0129880:intron 25.0%
!! CGAATGTTTTATAGTGAATA+TGG + chr1_3:59948377-59948396 None:intergenic 25.0%
! TATAAAACATTCGTTTGTCT+TGG - chr1_3:59948384-59948403 Msa0129880:intron 25.0%
!! TAGCTAACATTGAGAATTTT+AGG - chr1_3:59948798-59948817 Msa0129880:CDS 25.0%
! CAGAGTAATAGATTAAAGAT+GGG - chr1_3:59949413-59949432 Msa0129880:intron 25.0%
! AGAGTAATAGATTAAAGATG+GGG - chr1_3:59949414-59949433 Msa0129880:intron 25.0%
! TTGTTGCCTTATATAAGAAT+AGG - chr1_3:59949462-59949481 Msa0129880:intron 25.0%
! CCATATCCTATTCTTATATA+AGG + chr1_3:59949471-59949490 None:intergenic 25.0%
! CCTTATATAAGAATAGGATA+TGG - chr1_3:59949468-59949487 Msa0129880:intron 25.0%
! TACTTGGACTTAAACTTAAA+AGG - chr1_3:59949540-59949559 Msa0129880:intron 25.0%
!!! TCTGTTCTTCTTTTTTGTTT+TGG - chr1_3:59949679-59949698 Msa0129880:intron 25.0%
! TCAAAATCAGATTCTTTATC+AGG + chr1_3:59949775-59949794 None:intergenic 25.0%
!!! TAAAGAATCTGATTTTGACT+CGG - chr1_3:59949777-59949796 Msa0129880:intron 25.0%
! GTTATCAATATGAAAACTCA+AGG - chr1_3:59949928-59949947 Msa0129880:CDS 25.0%
!! TATGGTGTTAAACTTAAAAC+AGG - chr1_3:59949988-59950007 Msa0129880:CDS 25.0%
!! GTGTCTTTATAGAGATATTT+TGG - chr1_3:59950016-59950035 Msa0129880:intron 25.0%
!! ATTGGTAGAAGTATGTTTAT+CGG - chr1_3:59950045-59950064 Msa0129880:intron 25.0%
! ATTCATTATAAGCAAGAAAG+GGG + chr1_3:59950130-59950149 None:intergenic 25.0%
! CATTCATTATAAGCAAGAAA+GGG + chr1_3:59950131-59950150 None:intergenic 25.0%
! TCATTCATTATAAGCAAGAA+AGG + chr1_3:59950132-59950151 None:intergenic 25.0%
! ATGTTCACTTGATTATTGAA+AGG - chr1_3:59950266-59950285 Msa0129880:intron 25.0%
! GATTAATACAGTGATTTCAT+TGG - chr1_3:59950638-59950657 Msa0129880:exon 25.0%
! TTTCATTGGCATTATTTGTA+AGG - chr1_3:59950652-59950671 Msa0129880:exon 25.0%
! CAATAAAATTGGTATGAACA+AGG + chr1_3:59950748-59950767 None:intergenic 25.0%
!!! CGGTTTCTATTTTTGAATTT+AGG - chr1_3:59947196-59947215 Msa0129880:CDS 25.0%
! AATAATCAATTGAAGAAACC+CGG + chr1_3:59947428-59947447 None:intergenic 25.0%
!! ATTTTTACCTTTCAGTATGT+TGG - chr1_3:59947568-59947587 Msa0129880:intron 25.0%
! ATAATTTCTAACTGTATGCA+TGG - chr1_3:59947613-59947632 Msa0129880:intron 25.0%
! AGTGTATCACTATATGAAAA+CGG + chr1_3:59947672-59947691 None:intergenic 25.0%
! TTTGTACAAGAATATGAAGA+TGG - chr1_3:59947869-59947888 Msa0129880:CDS 25.0%
! TTATGAATAGTTATCAGAGA+GGG + chr1_3:59947975-59947994 None:intergenic 25.0%
! CTGATAACTATTCATAAGAT+TGG - chr1_3:59947978-59947997 Msa0129880:CDS 25.0%
! ATAACTATTCATAAGATTGG+TGG - chr1_3:59947981-59948000 Msa0129880:CDS 25.0%
!!! ATTTTGTGTCTTTTGTTTTG+TGG - chr1_3:59948043-59948062 Msa0129880:intron 25.0%
! ATATTAAGAGAAATTGACTG+GGG - chr1_3:59948348-59948367 Msa0129880:intron 25.0%
!! CGAATGTTTTATAGTGAATA+TGG + chr1_3:59948377-59948396 None:intergenic 25.0%
! TATAAAACATTCGTTTGTCT+TGG - chr1_3:59948384-59948403 Msa0129880:intron 25.0%
!! TAGCTAACATTGAGAATTTT+AGG - chr1_3:59948798-59948817 Msa0129880:CDS 25.0%
! CAGAGTAATAGATTAAAGAT+GGG - chr1_3:59949413-59949432 Msa0129880:intron 25.0%
! AGAGTAATAGATTAAAGATG+GGG - chr1_3:59949414-59949433 Msa0129880:intron 25.0%
! TTGTTGCCTTATATAAGAAT+AGG - chr1_3:59949462-59949481 Msa0129880:intron 25.0%
! CCATATCCTATTCTTATATA+AGG + chr1_3:59949471-59949490 None:intergenic 25.0%
! CCTTATATAAGAATAGGATA+TGG - chr1_3:59949468-59949487 Msa0129880:intron 25.0%
! TACTTGGACTTAAACTTAAA+AGG - chr1_3:59949540-59949559 Msa0129880:intron 25.0%
!!! TCTGTTCTTCTTTTTTGTTT+TGG - chr1_3:59949679-59949698 Msa0129880:intron 25.0%
! TCAAAATCAGATTCTTTATC+AGG + chr1_3:59949775-59949794 None:intergenic 25.0%
!!! TAAAGAATCTGATTTTGACT+CGG - chr1_3:59949777-59949796 Msa0129880:intron 25.0%
! GTTATCAATATGAAAACTCA+AGG - chr1_3:59949928-59949947 Msa0129880:CDS 25.0%
!! TATGGTGTTAAACTTAAAAC+AGG - chr1_3:59949988-59950007 Msa0129880:CDS 25.0%
!! GTGTCTTTATAGAGATATTT+TGG - chr1_3:59950016-59950035 Msa0129880:intron 25.0%
!! ATTGGTAGAAGTATGTTTAT+CGG - chr1_3:59950045-59950064 Msa0129880:intron 25.0%
! ATTCATTATAAGCAAGAAAG+GGG + chr1_3:59950130-59950149 None:intergenic 25.0%
! CATTCATTATAAGCAAGAAA+GGG + chr1_3:59950131-59950150 None:intergenic 25.0%
! TCATTCATTATAAGCAAGAA+AGG + chr1_3:59950132-59950151 None:intergenic 25.0%
! ATGTTCACTTGATTATTGAA+AGG - chr1_3:59950266-59950285 Msa0129880:intron 25.0%
! GATTAATACAGTGATTTCAT+TGG - chr1_3:59950638-59950657 Msa0129880:exon 25.0%
! TTTCATTGGCATTATTTGTA+AGG - chr1_3:59950652-59950671 Msa0129880:exon 25.0%
! CAATAAAATTGGTATGAACA+AGG + chr1_3:59950748-59950767 None:intergenic 25.0%
CGCGCAATCAAATAAAATAT+CGG - chr1_3:59946853-59946872 Msa0129880:three_prime_UTR 30.0%
TTCAATTCAATTCAACACGA+TGG + chr1_3:59946899-59946918 None:intergenic 30.0%
!!! CGATGAGAGTTTTGAATTTA+GGG + chr1_3:59946959-59946978 None:intergenic 30.0%
!!! ACGATGAGAGTTTTGAATTT+AGG + chr1_3:59946960-59946979 None:intergenic 30.0%
CTCTCAGATCTATTCAATTT+CGG - chr1_3:59947176-59947195 Msa0129880:CDS 30.0%
GAACAGATTAAGAAAACAAG+AGG - chr1_3:59947338-59947357 Msa0129880:intron 30.0%
GGGTTTCTTCAATTGATTAT+TGG - chr1_3:59947427-59947446 Msa0129880:intron 30.0%
TTACTCAGACTTAGAATACT+CGG - chr1_3:59947450-59947469 Msa0129880:intron 30.0%
! CTTCAACTTTAAAAGGCTAT+CGG - chr1_3:59947524-59947543 Msa0129880:intron 30.0%
AAATAGTGATGTCATACAGA+TGG + chr1_3:59947852-59947871 None:intergenic 30.0%
CTTATGAATAGTTATCAGAG+AGG + chr1_3:59947976-59947995 None:intergenic 30.0%
TGGTTTATTCTAAACGTGAT+CGG - chr1_3:59948063-59948082 Msa0129880:intron 30.0%
!!! AAGGAAGCACTTTTTTGTTA+AGG + chr1_3:59948089-59948108 None:intergenic 30.0%
! GGACAAATGGTTTGTAATTT+GGG - chr1_3:59948489-59948508 Msa0129880:intron 30.0%
! AAATGGTTTGTAATTTGGGA+GGG - chr1_3:59948493-59948512 Msa0129880:intron 30.0%
CAATACATACATCAATGTCT+TGG + chr1_3:59948752-59948771 None:intergenic 30.0%
TTTCATTACTTACATCCATC+AGG + chr1_3:59948871-59948890 None:intergenic 30.0%
TAATGAAATCCAAGAGACTT+TGG - chr1_3:59948883-59948902 Msa0129880:intron 30.0%
AATGAAATCCAAGAGACTTT+GGG - chr1_3:59948884-59948903 Msa0129880:intron 30.0%
TAAGCTCTTGAGATATATGT+TGG - chr1_3:59948975-59948994 Msa0129880:CDS 30.0%
! GTTACTAGGAGTTTTCAAAA+AGG + chr1_3:59949004-59949023 None:intergenic 30.0%
TTTGAAAACTCCTAGTAACA+TGG - chr1_3:59949005-59949024 Msa0129880:CDS 30.0%
! GTGTTATTAATTGCAGATTG+CGG - chr1_3:59949079-59949098 Msa0129880:intron 30.0%
! AGTTTGTTCAAATTCCGTTA+TGG - chr1_3:59949110-59949129 Msa0129880:intron 30.0%
TAAATAGCGTTATTGCATAG+CGG + chr1_3:59949221-59949240 None:intergenic 30.0%
! ATCAGTTGCATTTTCATTTG+TGG - chr1_3:59949335-59949354 Msa0129880:intron 30.0%
! TCAGTTGCATTTTCATTTGT+GGG - chr1_3:59949336-59949355 Msa0129880:intron 30.0%
CCATCTTTAATCTATTACTC+TGG + chr1_3:59949415-59949434 None:intergenic 30.0%
CCAGAGTAATAGATTAAAGA+TGG - chr1_3:59949412-59949431 Msa0129880:intron 30.0%
TGTATAAATTTCAAGACCAG+TGG - chr1_3:59949510-59949529 Msa0129880:intron 30.0%
! AAAAGTGTATAGTGACTAGT+TGG + chr1_3:59949592-59949611 None:intergenic 30.0%
! ACTAGTCACTATACACTTTT+AGG - chr1_3:59949592-59949611 Msa0129880:intron 30.0%
! CTAGTCACTATACACTTTTA+GGG - chr1_3:59949593-59949612 Msa0129880:intron 30.0%
AATCAGATTCTTTATCAGGT+TGG + chr1_3:59949771-59949790 None:intergenic 30.0%
AAAATACTATACTTGGGCAT+TGG + chr1_3:59949857-59949876 None:intergenic 30.0%
!!! GAGATATTTTGGCTACATAT+TGG - chr1_3:59950027-59950046 Msa0129880:intron 30.0%
TGAACATACAATTCAAGTGT+AGG + chr1_3:59950253-59950272 None:intergenic 30.0%
ACTAATAGATCACACAAAAG+AGG + chr1_3:59950341-59950360 None:intergenic 30.0%
GGAAATTTATTATCGATGCT+TGG - chr1_3:59950673-59950692 Msa0129880:five_prime_UTR 30.0%
CAGGATTCAGACAATAAAAT+TGG + chr1_3:59950759-59950778 None:intergenic 30.0%
AGGAAATTTCAACAGAAGTA+AGG - chr1_3:59950844-59950863 Msa0129880:five_prime_UTR 30.0%
GGAAATTTCAACAGAAGTAA+GGG - chr1_3:59950845-59950864 Msa0129880:five_prime_UTR 30.0%
CGCGCAATCAAATAAAATAT+CGG - chr1_3:59946853-59946872 Msa0129880:three_prime_UTR 30.0%
TTCAATTCAATTCAACACGA+TGG + chr1_3:59946899-59946918 None:intergenic 30.0%
!!! CGATGAGAGTTTTGAATTTA+GGG + chr1_3:59946959-59946978 None:intergenic 30.0%
!!! ACGATGAGAGTTTTGAATTT+AGG + chr1_3:59946960-59946979 None:intergenic 30.0%
CTCTCAGATCTATTCAATTT+CGG - chr1_3:59947176-59947195 Msa0129880:CDS 30.0%
GAACAGATTAAGAAAACAAG+AGG - chr1_3:59947338-59947357 Msa0129880:intron 30.0%
GGGTTTCTTCAATTGATTAT+TGG - chr1_3:59947427-59947446 Msa0129880:intron 30.0%
TTACTCAGACTTAGAATACT+CGG - chr1_3:59947450-59947469 Msa0129880:intron 30.0%
! CTTCAACTTTAAAAGGCTAT+CGG - chr1_3:59947524-59947543 Msa0129880:intron 30.0%
AAATAGTGATGTCATACAGA+TGG + chr1_3:59947852-59947871 None:intergenic 30.0%
CTTATGAATAGTTATCAGAG+AGG + chr1_3:59947976-59947995 None:intergenic 30.0%
TGGTTTATTCTAAACGTGAT+CGG - chr1_3:59948063-59948082 Msa0129880:intron 30.0%
!!! AAGGAAGCACTTTTTTGTTA+AGG + chr1_3:59948089-59948108 None:intergenic 30.0%
! GGACAAATGGTTTGTAATTT+GGG - chr1_3:59948489-59948508 Msa0129880:intron 30.0%
! AAATGGTTTGTAATTTGGGA+GGG - chr1_3:59948493-59948512 Msa0129880:intron 30.0%
CAATACATACATCAATGTCT+TGG + chr1_3:59948752-59948771 None:intergenic 30.0%
TTTCATTACTTACATCCATC+AGG + chr1_3:59948871-59948890 None:intergenic 30.0%
TAATGAAATCCAAGAGACTT+TGG - chr1_3:59948883-59948902 Msa0129880:intron 30.0%
AATGAAATCCAAGAGACTTT+GGG - chr1_3:59948884-59948903 Msa0129880:intron 30.0%
TAAGCTCTTGAGATATATGT+TGG - chr1_3:59948975-59948994 Msa0129880:CDS 30.0%
! GTTACTAGGAGTTTTCAAAA+AGG + chr1_3:59949004-59949023 None:intergenic 30.0%
TTTGAAAACTCCTAGTAACA+TGG - chr1_3:59949005-59949024 Msa0129880:CDS 30.0%
! GTGTTATTAATTGCAGATTG+CGG - chr1_3:59949079-59949098 Msa0129880:intron 30.0%
! AGTTTGTTCAAATTCCGTTA+TGG - chr1_3:59949110-59949129 Msa0129880:intron 30.0%
TAAATAGCGTTATTGCATAG+CGG + chr1_3:59949221-59949240 None:intergenic 30.0%
! ATCAGTTGCATTTTCATTTG+TGG - chr1_3:59949335-59949354 Msa0129880:intron 30.0%
! TCAGTTGCATTTTCATTTGT+GGG - chr1_3:59949336-59949355 Msa0129880:intron 30.0%
CCATCTTTAATCTATTACTC+TGG + chr1_3:59949415-59949434 None:intergenic 30.0%
CCAGAGTAATAGATTAAAGA+TGG - chr1_3:59949412-59949431 Msa0129880:intron 30.0%
TGTATAAATTTCAAGACCAG+TGG - chr1_3:59949510-59949529 Msa0129880:intron 30.0%
! AAAAGTGTATAGTGACTAGT+TGG + chr1_3:59949592-59949611 None:intergenic 30.0%
! ACTAGTCACTATACACTTTT+AGG - chr1_3:59949592-59949611 Msa0129880:intron 30.0%
! CTAGTCACTATACACTTTTA+GGG - chr1_3:59949593-59949612 Msa0129880:intron 30.0%
AATCAGATTCTTTATCAGGT+TGG + chr1_3:59949771-59949790 None:intergenic 30.0%
AAAATACTATACTTGGGCAT+TGG + chr1_3:59949857-59949876 None:intergenic 30.0%
!!! GAGATATTTTGGCTACATAT+TGG - chr1_3:59950027-59950046 Msa0129880:intron 30.0%
TGAACATACAATTCAAGTGT+AGG + chr1_3:59950253-59950272 None:intergenic 30.0%
ACTAATAGATCACACAAAAG+AGG + chr1_3:59950341-59950360 None:intergenic 30.0%
GGAAATTTATTATCGATGCT+TGG - chr1_3:59950673-59950692 Msa0129880:five_prime_UTR 30.0%
CAGGATTCAGACAATAAAAT+TGG + chr1_3:59950759-59950778 None:intergenic 30.0%
AGGAAATTTCAACAGAAGTA+AGG - chr1_3:59950844-59950863 Msa0129880:five_prime_UTR 30.0%
GGAAATTTCAACAGAAGTAA+GGG - chr1_3:59950845-59950864 Msa0129880:five_prime_UTR 30.0%
AGAACGATGAAAAGAGTCTT+CGG - chr1_3:59947062-59947081 Msa0129880:three_prime_UTR 35.0%
AATTGAAGATGCCAACGAAA+GGG - chr1_3:59947115-59947134 Msa0129880:three_prime_UTR 35.0%
AATGAAGATTACCCTTTCGT+TGG + chr1_3:59947129-59947148 None:intergenic 35.0%
AGAATTTGAAGAAACCCTAG+CGG + chr1_3:59947158-59947177 None:intergenic 35.0%
!!! CGATAGCCTTTTAAAGTTGA+AGG + chr1_3:59947526-59947545 None:intergenic 35.0%
! TGATACACTTACCTTTTGTC+AGG - chr1_3:59947683-59947702 Msa0129880:intron 35.0%
! TTACCTTTTGTCAGGTATGA+AGG - chr1_3:59947691-59947710 Msa0129880:intron 35.0%
! ATCTTTTCTAGACCCTTCAA+TGG - chr1_3:59948175-59948194 Msa0129880:intron 35.0%
ATGTGGCACAATATTACACT+AGG + chr1_3:59948207-59948226 None:intergenic 35.0%
! GGGACAAATGGTTTGTAATT+TGG - chr1_3:59948488-59948507 Msa0129880:intron 35.0%
! CAAATGGTTTGTAATTTGGG+AGG - chr1_3:59948492-59948511 Msa0129880:intron 35.0%
TTCAAAGCTGACATCTGAAA+AGG + chr1_3:59948684-59948703 None:intergenic 35.0%
TGAAGCACAACAAAATCTCA+GGG + chr1_3:59949056-59949075 None:intergenic 35.0%
TTGAAGCACAACAAAATCTC+AGG + chr1_3:59949057-59949076 None:intergenic 35.0%
TTGTGAATTAGAGGCTATAG+CGG + chr1_3:59949151-59949170 None:intergenic 35.0%
! TCCTGATTCGAATGAAAAGA+CGG - chr1_3:59949290-59949309 Msa0129880:intron 35.0%
! AATCTATTACTCTGGCTTAG+AGG + chr1_3:59949407-59949426 None:intergenic 35.0%
! GACTTAAACTTAAAAGGCGT+GGG - chr1_3:59949546-59949565 Msa0129880:intron 35.0%
!!! TCTCCTTTTTTTTGGTGATG+AGG - chr1_3:59949644-59949663 Msa0129880:intron 35.0%
!!! CTCCTTTTTTTTGGTGATGA+GGG - chr1_3:59949645-59949664 Msa0129880:intron 35.0%
!!! TCCTTTTTTTTGGTGATGAG+GGG - chr1_3:59949646-59949665 Msa0129880:intron 35.0%
GACATGGAAAATGAATCTGA+AGG - chr1_3:59949730-59949749 Msa0129880:intron 35.0%
TTACTTGTTTCCTCTTGAGA+AGG - chr1_3:59950068-59950087 Msa0129880:intron 35.0%
TACTTGTTTCCTCTTGAGAA+GGG - chr1_3:59950069-59950088 Msa0129880:intron 35.0%
!! AGAAAAAAGGCACCAAGTAT+AGG + chr1_3:59950159-59950178 None:intergenic 35.0%
! ATTCTGATGGTGTAACTCTA+TGG - chr1_3:59950222-59950241 Msa0129880:intron 35.0%
CGGTAACAAAGTAATCAATC+AGG + chr1_3:59950480-59950499 None:intergenic 35.0%
!! TTTTATTTCATTGGCGTAGC+TGG - chr1_3:59950566-59950585 Msa0129880:intron 35.0%
AAGTTCTGCACAACTTTACA+AGG + chr1_3:59950609-59950628 None:intergenic 35.0%
CTGACGATTTATCACATTCA+GGG + chr1_3:59950826-59950845 None:intergenic 35.0%
AGAACGATGAAAAGAGTCTT+CGG - chr1_3:59947062-59947081 Msa0129880:three_prime_UTR 35.0%
AATTGAAGATGCCAACGAAA+GGG - chr1_3:59947115-59947134 Msa0129880:three_prime_UTR 35.0%
AATGAAGATTACCCTTTCGT+TGG + chr1_3:59947129-59947148 None:intergenic 35.0%
AGAATTTGAAGAAACCCTAG+CGG + chr1_3:59947158-59947177 None:intergenic 35.0%
!!! CGATAGCCTTTTAAAGTTGA+AGG + chr1_3:59947526-59947545 None:intergenic 35.0%
! TGATACACTTACCTTTTGTC+AGG - chr1_3:59947683-59947702 Msa0129880:intron 35.0%
! TTACCTTTTGTCAGGTATGA+AGG - chr1_3:59947691-59947710 Msa0129880:intron 35.0%
! ATCTTTTCTAGACCCTTCAA+TGG - chr1_3:59948175-59948194 Msa0129880:intron 35.0%
ATGTGGCACAATATTACACT+AGG + chr1_3:59948207-59948226 None:intergenic 35.0%
! GGGACAAATGGTTTGTAATT+TGG - chr1_3:59948488-59948507 Msa0129880:intron 35.0%
! CAAATGGTTTGTAATTTGGG+AGG - chr1_3:59948492-59948511 Msa0129880:intron 35.0%
TTCAAAGCTGACATCTGAAA+AGG + chr1_3:59948684-59948703 None:intergenic 35.0%
TGAAGCACAACAAAATCTCA+GGG + chr1_3:59949056-59949075 None:intergenic 35.0%
TTGAAGCACAACAAAATCTC+AGG + chr1_3:59949057-59949076 None:intergenic 35.0%
TTGTGAATTAGAGGCTATAG+CGG + chr1_3:59949151-59949170 None:intergenic 35.0%
! TCCTGATTCGAATGAAAAGA+CGG - chr1_3:59949290-59949309 Msa0129880:intron 35.0%
! AATCTATTACTCTGGCTTAG+AGG + chr1_3:59949407-59949426 None:intergenic 35.0%
! GACTTAAACTTAAAAGGCGT+GGG - chr1_3:59949546-59949565 Msa0129880:intron 35.0%
!!! TCTCCTTTTTTTTGGTGATG+AGG - chr1_3:59949644-59949663 Msa0129880:intron 35.0%
!!! CTCCTTTTTTTTGGTGATGA+GGG - chr1_3:59949645-59949664 Msa0129880:intron 35.0%
!!! TCCTTTTTTTTGGTGATGAG+GGG - chr1_3:59949646-59949665 Msa0129880:intron 35.0%
GACATGGAAAATGAATCTGA+AGG - chr1_3:59949730-59949749 Msa0129880:intron 35.0%
TTACTTGTTTCCTCTTGAGA+AGG - chr1_3:59950068-59950087 Msa0129880:intron 35.0%
TACTTGTTTCCTCTTGAGAA+GGG - chr1_3:59950069-59950088 Msa0129880:intron 35.0%
!! AGAAAAAAGGCACCAAGTAT+AGG + chr1_3:59950159-59950178 None:intergenic 35.0%
! ATTCTGATGGTGTAACTCTA+TGG - chr1_3:59950222-59950241 Msa0129880:intron 35.0%
CGGTAACAAAGTAATCAATC+AGG + chr1_3:59950480-59950499 None:intergenic 35.0%
!! TTTTATTTCATTGGCGTAGC+TGG - chr1_3:59950566-59950585 Msa0129880:intron 35.0%
AAGTTCTGCACAACTTTACA+AGG + chr1_3:59950609-59950628 None:intergenic 35.0%
CTGACGATTTATCACATTCA+GGG + chr1_3:59950826-59950845 None:intergenic 35.0%
TGGCATCTTCAATTGAAGGA+GGG + chr1_3:59947109-59947128 None:intergenic 40.0%
TTGGCATCTTCAATTGAAGG+AGG + chr1_3:59947110-59947129 None:intergenic 40.0%
TCGTTGGCATCTTCAATTGA+AGG + chr1_3:59947113-59947132 None:intergenic 40.0%
CAATTGAAGATGCCAACGAA+AGG - chr1_3:59947114-59947133 Msa0129880:three_prime_UTR 40.0%
TGTTTGCAGATTACCAAACG+AGG - chr1_3:59947260-59947279 Msa0129880:intron 40.0%
GATTACCAAACGAGGTGATA+CGG - chr1_3:59947268-59947287 Msa0129880:intron 40.0%
!! CTTTTGTTTAAGAACCCGCA+TGG + chr1_3:59947393-59947412 None:intergenic 40.0%
ACAAAAGCGAATGTGAGTAC+CGG - chr1_3:59947406-59947425 Msa0129880:intron 40.0%
!! CGGTAGCTTTTAAGAGTAGT+TGG - chr1_3:59947544-59947563 Msa0129880:intron 40.0%
CCAACTTCCAACATACTGAA+AGG + chr1_3:59947578-59947597 None:intergenic 40.0%
CCTTTCAGTATGTTGGAAGT+TGG - chr1_3:59947575-59947594 Msa0129880:intron 40.0%
TGACCTTCATACCTGACAAA+AGG + chr1_3:59947697-59947716 None:intergenic 40.0%
!! TCAAGTTCAATTTGCTGCTG+AGG - chr1_3:59947753-59947772 Msa0129880:intron 40.0%
!! CAAGTTCAATTTGCTGCTGA+GGG - chr1_3:59947754-59947773 Msa0129880:intron 40.0%
TGAATAGTTATCAGAGAGGG+AGG + chr1_3:59947972-59947991 None:intergenic 40.0%
! TCAGCACTGTGGTTTTTGAA+AGG - chr1_3:59948007-59948026 Msa0129880:intron 40.0%
!! CAGCACTGTGGTTTTTGAAA+GGG - chr1_3:59948008-59948027 Msa0129880:intron 40.0%
!! AGCACTGTGGTTTTTGAAAG+GGG - chr1_3:59948009-59948028 Msa0129880:intron 40.0%
! AGTGCTTCCTTGTTATCTTG+TGG - chr1_3:59948098-59948117 Msa0129880:intron 40.0%
CATGTGACCACAAGATAACA+AGG + chr1_3:59948108-59948127 None:intergenic 40.0%
TTATCTTGTGGTCACATGTC+AGG - chr1_3:59948110-59948129 Msa0129880:intron 40.0%
! TTTTCTAGACCCTTCAATGG+TGG - chr1_3:59948178-59948197 Msa0129880:intron 40.0%
TTTCTAGACCCTTCAATGGT+GGG - chr1_3:59948179-59948198 Msa0129880:intron 40.0%
!! TTTGTCTTGGTAGCGCTTTA+AGG - chr1_3:59948397-59948416 Msa0129880:intron 40.0%
!! TTGTCTTGGTAGCGCTTTAA+GGG - chr1_3:59948398-59948417 Msa0129880:intron 40.0%
AAGCTGACATCTGAAAAGGA+GGG + chr1_3:59948680-59948699 None:intergenic 40.0%
AAAGCTGACATCTGAAAAGG+AGG + chr1_3:59948681-59948700 None:intergenic 40.0%
TCTGCCAACAAGGATTTGAA+GGG - chr1_3:59948705-59948724 Msa0129880:intron 40.0%
CATTCCCTTCAAATCCTTGT+TGG + chr1_3:59948712-59948731 None:intergenic 40.0%
GAACTTGCAAGATGAGATGA+TGG - chr1_3:59948844-59948863 Msa0129880:CDS 40.0%
TCCTAGTAACATGGCTTCAT+GGG - chr1_3:59949014-59949033 Msa0129880:CDS 40.0%
GCTATAGCAGTGTTCCATAA+CGG + chr1_3:59949127-59949146 None:intergenic 40.0%
! TCCGTCTTTTCATTCGAATC+AGG + chr1_3:59949294-59949313 None:intergenic 40.0%
! TTGCATTTTCATTTGTGGGC+TGG - chr1_3:59949340-59949359 Msa0129880:intron 40.0%
GGACTTAAACTTAAAAGGCG+TGG - chr1_3:59949545-59949564 Msa0129880:intron 40.0%
! AGGGAATGAGCACTCATTTT+CGG - chr1_3:59949612-59949631 Msa0129880:intron 40.0%
ACCCCTCATCACCAAAAAAA+AGG + chr1_3:59949650-59949669 None:intergenic 40.0%
AATATCAGAACTTGATGCGC+TGG - chr1_3:59949702-59949721 Msa0129880:intron 40.0%
!! TTCTTTATCAGGTTGGAGGT+AGG + chr1_3:59949764-59949783 None:intergenic 40.0%
!! CAGATTCTTTATCAGGTTGG+AGG + chr1_3:59949768-59949787 None:intergenic 40.0%
CTAAGTAATCCCTTCTCAAG+AGG + chr1_3:59950081-59950100 None:intergenic 40.0%
ATGAATGAGCAGCCTATACT+TGG - chr1_3:59950144-59950163 Msa0129880:intron 40.0%
ATGTATCATGTGCATGCTTG+AGG - chr1_3:59950195-59950214 Msa0129880:intron 40.0%
! GGCATTGAGCAACTATACAA+AGG + chr1_3:59950320-59950339 None:intergenic 40.0%
! AGCATCGAGAATAACTTGTC+AGG + chr1_3:59950368-59950387 None:intergenic 40.0%
AAGCATTCTTTAACCGCGTA+GGG + chr1_3:59950547-59950566 None:intergenic 40.0%
! AAAGCATTCTTTAACCGCGT+AGG + chr1_3:59950548-59950567 None:intergenic 40.0%
TTGGCAAACACTAGAGAACT+TGG - chr1_3:59950692-59950711 Msa0129880:five_prime_UTR 40.0%
CCTGACGATTTATCACATTC+AGG + chr1_3:59950827-59950846 None:intergenic 40.0%
CCTGAATGTGATAAATCGTC+AGG - chr1_3:59950824-59950843 Msa0129880:five_prime_UTR 40.0%
TGGCATCTTCAATTGAAGGA+GGG + chr1_3:59947109-59947128 None:intergenic 40.0%
TTGGCATCTTCAATTGAAGG+AGG + chr1_3:59947110-59947129 None:intergenic 40.0%
TCGTTGGCATCTTCAATTGA+AGG + chr1_3:59947113-59947132 None:intergenic 40.0%
CAATTGAAGATGCCAACGAA+AGG - chr1_3:59947114-59947133 Msa0129880:three_prime_UTR 40.0%
TGTTTGCAGATTACCAAACG+AGG - chr1_3:59947260-59947279 Msa0129880:intron 40.0%
GATTACCAAACGAGGTGATA+CGG - chr1_3:59947268-59947287 Msa0129880:intron 40.0%
!! CTTTTGTTTAAGAACCCGCA+TGG + chr1_3:59947393-59947412 None:intergenic 40.0%
ACAAAAGCGAATGTGAGTAC+CGG - chr1_3:59947406-59947425 Msa0129880:intron 40.0%
!! CGGTAGCTTTTAAGAGTAGT+TGG - chr1_3:59947544-59947563 Msa0129880:intron 40.0%
CCAACTTCCAACATACTGAA+AGG + chr1_3:59947578-59947597 None:intergenic 40.0%
CCTTTCAGTATGTTGGAAGT+TGG - chr1_3:59947575-59947594 Msa0129880:intron 40.0%
TGACCTTCATACCTGACAAA+AGG + chr1_3:59947697-59947716 None:intergenic 40.0%
!! TCAAGTTCAATTTGCTGCTG+AGG - chr1_3:59947753-59947772 Msa0129880:intron 40.0%
!! CAAGTTCAATTTGCTGCTGA+GGG - chr1_3:59947754-59947773 Msa0129880:intron 40.0%
TGAATAGTTATCAGAGAGGG+AGG + chr1_3:59947972-59947991 None:intergenic 40.0%
! TCAGCACTGTGGTTTTTGAA+AGG - chr1_3:59948007-59948026 Msa0129880:intron 40.0%
!! CAGCACTGTGGTTTTTGAAA+GGG - chr1_3:59948008-59948027 Msa0129880:intron 40.0%
!! AGCACTGTGGTTTTTGAAAG+GGG - chr1_3:59948009-59948028 Msa0129880:intron 40.0%
! AGTGCTTCCTTGTTATCTTG+TGG - chr1_3:59948098-59948117 Msa0129880:intron 40.0%
CATGTGACCACAAGATAACA+AGG + chr1_3:59948108-59948127 None:intergenic 40.0%
TTATCTTGTGGTCACATGTC+AGG - chr1_3:59948110-59948129 Msa0129880:intron 40.0%
! TTTTCTAGACCCTTCAATGG+TGG - chr1_3:59948178-59948197 Msa0129880:intron 40.0%
TTTCTAGACCCTTCAATGGT+GGG - chr1_3:59948179-59948198 Msa0129880:intron 40.0%
!! TTTGTCTTGGTAGCGCTTTA+AGG - chr1_3:59948397-59948416 Msa0129880:intron 40.0%
!! TTGTCTTGGTAGCGCTTTAA+GGG - chr1_3:59948398-59948417 Msa0129880:intron 40.0%
AAGCTGACATCTGAAAAGGA+GGG + chr1_3:59948680-59948699 None:intergenic 40.0%
AAAGCTGACATCTGAAAAGG+AGG + chr1_3:59948681-59948700 None:intergenic 40.0%
TCTGCCAACAAGGATTTGAA+GGG - chr1_3:59948705-59948724 Msa0129880:intron 40.0%
CATTCCCTTCAAATCCTTGT+TGG + chr1_3:59948712-59948731 None:intergenic 40.0%
GAACTTGCAAGATGAGATGA+TGG - chr1_3:59948844-59948863 Msa0129880:CDS 40.0%
TCCTAGTAACATGGCTTCAT+GGG - chr1_3:59949014-59949033 Msa0129880:CDS 40.0%
GCTATAGCAGTGTTCCATAA+CGG + chr1_3:59949127-59949146 None:intergenic 40.0%
! TCCGTCTTTTCATTCGAATC+AGG + chr1_3:59949294-59949313 None:intergenic 40.0%
! TTGCATTTTCATTTGTGGGC+TGG - chr1_3:59949340-59949359 Msa0129880:intron 40.0%
GGACTTAAACTTAAAAGGCG+TGG - chr1_3:59949545-59949564 Msa0129880:intron 40.0%
! AGGGAATGAGCACTCATTTT+CGG - chr1_3:59949612-59949631 Msa0129880:intron 40.0%
ACCCCTCATCACCAAAAAAA+AGG + chr1_3:59949650-59949669 None:intergenic 40.0%
AATATCAGAACTTGATGCGC+TGG - chr1_3:59949702-59949721 Msa0129880:intron 40.0%
!! TTCTTTATCAGGTTGGAGGT+AGG + chr1_3:59949764-59949783 None:intergenic 40.0%
!! CAGATTCTTTATCAGGTTGG+AGG + chr1_3:59949768-59949787 None:intergenic 40.0%
CTAAGTAATCCCTTCTCAAG+AGG + chr1_3:59950081-59950100 None:intergenic 40.0%
ATGAATGAGCAGCCTATACT+TGG - chr1_3:59950144-59950163 Msa0129880:intron 40.0%
ATGTATCATGTGCATGCTTG+AGG - chr1_3:59950195-59950214 Msa0129880:intron 40.0%
! GGCATTGAGCAACTATACAA+AGG + chr1_3:59950320-59950339 None:intergenic 40.0%
! AGCATCGAGAATAACTTGTC+AGG + chr1_3:59950368-59950387 None:intergenic 40.0%
AAGCATTCTTTAACCGCGTA+GGG + chr1_3:59950547-59950566 None:intergenic 40.0%
! AAAGCATTCTTTAACCGCGT+AGG + chr1_3:59950548-59950567 None:intergenic 40.0%
TTGGCAAACACTAGAGAACT+TGG - chr1_3:59950692-59950711 Msa0129880:five_prime_UTR 40.0%
CCTGACGATTTATCACATTC+AGG + chr1_3:59950827-59950846 None:intergenic 40.0%
CCTGAATGTGATAAATCGTC+AGG - chr1_3:59950824-59950843 Msa0129880:five_prime_UTR 40.0%
! GGGTTTTGCTTTGCTTAACG+CGG + chr1_3:59946939-59946958 None:intergenic 45.0%
!! CTTCGGTGTCAAAGCGAAAA+AGG - chr1_3:59947079-59947098 Msa0129880:three_prime_UTR 45.0%
GCATCTTCAATTGAAGGAGG+GGG + chr1_3:59947107-59947126 None:intergenic 45.0%
GGCATCTTCAATTGAAGGAG+GGG + chr1_3:59947108-59947127 None:intergenic 45.0%
ATCTTCATTCAATCGCCGCT+AGG - chr1_3:59947140-59947159 Msa0129880:three_prime_UTR 45.0%
TCTTCATTCAATCGCCGCTA+GGG - chr1_3:59947141-59947160 Msa0129880:three_prime_UTR 45.0%
CTGTTAAAGCTAGAGCCATG+CGG - chr1_3:59947375-59947394 Msa0129880:intron 45.0%
TGTTAAAGCTAGAGCCATGC+GGG - chr1_3:59947376-59947395 Msa0129880:intron 45.0%
CAAAAGCGAATGTGAGTACC+GGG - chr1_3:59947407-59947426 Msa0129880:intron 45.0%
TTATCAGAGAGGGAGGAATG+AGG + chr1_3:59947965-59947984 None:intergenic 45.0%
! AGCTTTGTCTGTACCCTGTT+TGG - chr1_3:59948437-59948456 Msa0129880:intron 45.0%
TAGGCAGCAGATTCCAAACA+GGG + chr1_3:59948453-59948472 None:intergenic 45.0%
AGCTGACATCTGAAAAGGAG+GGG + chr1_3:59948679-59948698 None:intergenic 45.0%
!! AGCTTTGAAGTCTGCCAACA+AGG - chr1_3:59948695-59948714 Msa0129880:intron 45.0%
GTCTGCCAACAAGGATTTGA+AGG - chr1_3:59948704-59948723 Msa0129880:intron 45.0%
!! AGATGAGATGATGGACCTGA+TGG - chr1_3:59948853-59948872 Msa0129880:CDS 45.0%
AGCTTCTACCCAAAGTCTCT+TGG + chr1_3:59948895-59948914 None:intergenic 45.0%
ATCGACGAGGAGGATCTTAT+GGG - chr1_3:59948932-59948951 Msa0129880:intron 45.0%
CTCCTAGTAACATGGCTTCA+TGG - chr1_3:59949013-59949032 Msa0129880:CDS 45.0%
ACCCATGAAGCCATGTTACT+AGG + chr1_3:59949018-59949037 None:intergenic 45.0%
AGTAACATGGCTTCATGGGT+TGG - chr1_3:59949018-59949037 Msa0129880:intron 45.0%
! GACGGACAATGTTCTAAGTG+AGG - chr1_3:59949308-59949327 Msa0129880:intron 45.0%
GACCAGTGGTGTATTCTACT+TGG - chr1_3:59949524-59949543 Msa0129880:intron 45.0%
GTCCAAGTAGAATACACCAC+TGG + chr1_3:59949529-59949548 None:intergenic 45.0%
!! TTATCAGGTTGGAGGTAGGA+GGG + chr1_3:59949760-59949779 None:intergenic 45.0%
!! TTTATCAGGTTGGAGGTAGG+AGG + chr1_3:59949761-59949780 None:intergenic 45.0%
TCTCGTTGCAACAGACGATA+TGG - chr1_3:59949970-59949989 Msa0129880:CDS 45.0%
TGCTTGAGGTTGCATTCTGA+TGG - chr1_3:59950209-59950228 Msa0129880:intron 45.0%
CCAGTTCATCTTCAGTCTGT+CGG + chr1_3:59950500-59950519 None:intergenic 45.0%
CGACAGACTGAAGATGAACT+GGG - chr1_3:59950498-59950517 Msa0129880:intron 45.0%
! GGGTTTTGCTTTGCTTAACG+CGG + chr1_3:59946939-59946958 None:intergenic 45.0%
!! CTTCGGTGTCAAAGCGAAAA+AGG - chr1_3:59947079-59947098 Msa0129880:three_prime_UTR 45.0%
GCATCTTCAATTGAAGGAGG+GGG + chr1_3:59947107-59947126 None:intergenic 45.0%
GGCATCTTCAATTGAAGGAG+GGG + chr1_3:59947108-59947127 None:intergenic 45.0%
ATCTTCATTCAATCGCCGCT+AGG - chr1_3:59947140-59947159 Msa0129880:three_prime_UTR 45.0%
TCTTCATTCAATCGCCGCTA+GGG - chr1_3:59947141-59947160 Msa0129880:three_prime_UTR 45.0%
CTGTTAAAGCTAGAGCCATG+CGG - chr1_3:59947375-59947394 Msa0129880:intron 45.0%
TGTTAAAGCTAGAGCCATGC+GGG - chr1_3:59947376-59947395 Msa0129880:intron 45.0%
CAAAAGCGAATGTGAGTACC+GGG - chr1_3:59947407-59947426 Msa0129880:intron 45.0%
TTATCAGAGAGGGAGGAATG+AGG + chr1_3:59947965-59947984 None:intergenic 45.0%
! AGCTTTGTCTGTACCCTGTT+TGG - chr1_3:59948437-59948456 Msa0129880:intron 45.0%
TAGGCAGCAGATTCCAAACA+GGG + chr1_3:59948453-59948472 None:intergenic 45.0%
AGCTGACATCTGAAAAGGAG+GGG + chr1_3:59948679-59948698 None:intergenic 45.0%
!! AGCTTTGAAGTCTGCCAACA+AGG - chr1_3:59948695-59948714 Msa0129880:intron 45.0%
GTCTGCCAACAAGGATTTGA+AGG - chr1_3:59948704-59948723 Msa0129880:intron 45.0%
!! AGATGAGATGATGGACCTGA+TGG - chr1_3:59948853-59948872 Msa0129880:CDS 45.0%
AGCTTCTACCCAAAGTCTCT+TGG + chr1_3:59948895-59948914 None:intergenic 45.0%
ATCGACGAGGAGGATCTTAT+GGG - chr1_3:59948932-59948951 Msa0129880:intron 45.0%
CTCCTAGTAACATGGCTTCA+TGG - chr1_3:59949013-59949032 Msa0129880:CDS 45.0%
ACCCATGAAGCCATGTTACT+AGG + chr1_3:59949018-59949037 None:intergenic 45.0%
AGTAACATGGCTTCATGGGT+TGG - chr1_3:59949018-59949037 Msa0129880:intron 45.0%
! GACGGACAATGTTCTAAGTG+AGG - chr1_3:59949308-59949327 Msa0129880:intron 45.0%
GACCAGTGGTGTATTCTACT+TGG - chr1_3:59949524-59949543 Msa0129880:intron 45.0%
GTCCAAGTAGAATACACCAC+TGG + chr1_3:59949529-59949548 None:intergenic 45.0%
!! TTATCAGGTTGGAGGTAGGA+GGG + chr1_3:59949760-59949779 None:intergenic 45.0%
!! TTTATCAGGTTGGAGGTAGG+AGG + chr1_3:59949761-59949780 None:intergenic 45.0%
TCTCGTTGCAACAGACGATA+TGG - chr1_3:59949970-59949989 Msa0129880:CDS 45.0%
TGCTTGAGGTTGCATTCTGA+TGG - chr1_3:59950209-59950228 Msa0129880:intron 45.0%
CCAGTTCATCTTCAGTCTGT+CGG + chr1_3:59950500-59950519 None:intergenic 45.0%
CGACAGACTGAAGATGAACT+GGG - chr1_3:59950498-59950517 Msa0129880:intron 45.0%
TACCAAACGAGGTGATACGG+TGG - chr1_3:59947271-59947290 Msa0129880:intron 50.0%
ATCCACCGTATCACCTCGTT+TGG + chr1_3:59947276-59947295 None:intergenic 50.0%
GAAAACAAGAGGTCCTGCTC+AGG - chr1_3:59947349-59947368 Msa0129880:intron 50.0%
GCTTTAACAGCATCCTGAGC+AGG + chr1_3:59947365-59947384 None:intergenic 50.0%
! ATTGGTGGCTTTCAGCACTG+TGG - chr1_3:59947996-59948015 Msa0129880:intron 50.0%
AAAAACGCCTCCCCACTAGT+GGG - chr1_3:59948133-59948152 Msa0129880:intron 50.0%
AAAGTCACGTCCCACTAGTG+GGG + chr1_3:59948146-59948165 None:intergenic 50.0%
CAAAGTCACGTCCCACTAGT+GGG + chr1_3:59948147-59948166 None:intergenic 50.0%
ACAAAGTCACGTCCCACTAG+TGG + chr1_3:59948148-59948167 None:intergenic 50.0%
ACTAGGCTCCCACCATTGAA+GGG + chr1_3:59948190-59948209 None:intergenic 50.0%
!! TGGTAGCGCTTTAAGGGTCA+TGG - chr1_3:59948404-59948423 Msa0129880:intron 50.0%
!! GCTTTAAGGGTCATGGTTCG+AGG - chr1_3:59948411-59948430 Msa0129880:intron 50.0%
TTAAGGGTCATGGTTCGAGG+CGG - chr1_3:59948414-59948433 Msa0129880:intron 50.0%
GTAGGCAGCAGATTCCAAAC+AGG + chr1_3:59948454-59948473 None:intergenic 50.0%
ACATCTGAAAAGGAGGGGTG+GGG + chr1_3:59948674-59948693 None:intergenic 50.0%
GACATCTGAAAAGGAGGGGT+GGG + chr1_3:59948675-59948694 None:intergenic 50.0%
TGACATCTGAAAAGGAGGGG+TGG + chr1_3:59948676-59948695 None:intergenic 50.0%
TGTTCCTGATGACATCGACG+AGG - chr1_3:59948919-59948938 Msa0129880:intron 50.0%
CATCGACGAGGAGGATCTTA+TGG - chr1_3:59948931-59948950 Msa0129880:intron 50.0%
CTAGTTGGATGAGCATCTGC+AGG + chr1_3:59949577-59949596 None:intergenic 50.0%
!! TATCAGGTTGGAGGTAGGAG+GGG + chr1_3:59949759-59949778 None:intergenic 50.0%
AACTTGCCTTCAGCTCCTAC+AGG - chr1_3:59949805-59949824 Msa0129880:intron 50.0%
GTTTGTCCTGTAGGAGCTGA+AGG + chr1_3:59949814-59949833 None:intergenic 50.0%
CCGACAGACTGAAGATGAAC+TGG - chr1_3:59950497-59950516 Msa0129880:intron 50.0%
TACCAAACGAGGTGATACGG+TGG - chr1_3:59947271-59947290 Msa0129880:intron 50.0%
ATCCACCGTATCACCTCGTT+TGG + chr1_3:59947276-59947295 None:intergenic 50.0%
GAAAACAAGAGGTCCTGCTC+AGG - chr1_3:59947349-59947368 Msa0129880:intron 50.0%
GCTTTAACAGCATCCTGAGC+AGG + chr1_3:59947365-59947384 None:intergenic 50.0%
! ATTGGTGGCTTTCAGCACTG+TGG - chr1_3:59947996-59948015 Msa0129880:intron 50.0%
AAAAACGCCTCCCCACTAGT+GGG - chr1_3:59948133-59948152 Msa0129880:intron 50.0%
AAAGTCACGTCCCACTAGTG+GGG + chr1_3:59948146-59948165 None:intergenic 50.0%
CAAAGTCACGTCCCACTAGT+GGG + chr1_3:59948147-59948166 None:intergenic 50.0%
ACAAAGTCACGTCCCACTAG+TGG + chr1_3:59948148-59948167 None:intergenic 50.0%
ACTAGGCTCCCACCATTGAA+GGG + chr1_3:59948190-59948209 None:intergenic 50.0%
!! TGGTAGCGCTTTAAGGGTCA+TGG - chr1_3:59948404-59948423 Msa0129880:intron 50.0%
!! GCTTTAAGGGTCATGGTTCG+AGG - chr1_3:59948411-59948430 Msa0129880:intron 50.0%
TTAAGGGTCATGGTTCGAGG+CGG - chr1_3:59948414-59948433 Msa0129880:intron 50.0%
GTAGGCAGCAGATTCCAAAC+AGG + chr1_3:59948454-59948473 None:intergenic 50.0%
ACATCTGAAAAGGAGGGGTG+GGG + chr1_3:59948674-59948693 None:intergenic 50.0%
GACATCTGAAAAGGAGGGGT+GGG + chr1_3:59948675-59948694 None:intergenic 50.0%
TGACATCTGAAAAGGAGGGG+TGG + chr1_3:59948676-59948695 None:intergenic 50.0%
TGTTCCTGATGACATCGACG+AGG - chr1_3:59948919-59948938 Msa0129880:intron 50.0%
CATCGACGAGGAGGATCTTA+TGG - chr1_3:59948931-59948950 Msa0129880:intron 50.0%
CTAGTTGGATGAGCATCTGC+AGG + chr1_3:59949577-59949596 None:intergenic 50.0%
!! TATCAGGTTGGAGGTAGGAG+GGG + chr1_3:59949759-59949778 None:intergenic 50.0%
AACTTGCCTTCAGCTCCTAC+AGG - chr1_3:59949805-59949824 Msa0129880:intron 50.0%
GTTTGTCCTGTAGGAGCTGA+AGG + chr1_3:59949814-59949833 None:intergenic 50.0%
CCGACAGACTGAAGATGAAC+TGG - chr1_3:59950497-59950516 Msa0129880:intron 50.0%
GAAAAACGCCTCCCCACTAG+TGG - chr1_3:59948132-59948151 Msa0129880:intron 55.0%
CACTAGGCTCCCACCATTGA+AGG + chr1_3:59948191-59948210 None:intergenic 55.0%
TGCCTACCTCACGAGAGGTA+GGG - chr1_3:59948467-59948486 Msa0129880:intron 55.0%
TTTGTCCCCTACCTCTCGTG+AGG + chr1_3:59948476-59948495 None:intergenic 55.0%
CACGAGAGGTAGGGGACAAA+TGG - chr1_3:59948476-59948495 Msa0129880:intron 55.0%
ATCTGAAAAGGAGGGGTGGG+GGG + chr1_3:59948672-59948691 None:intergenic 55.0%
CATCTGAAAAGGAGGGGTGG+GGG + chr1_3:59948673-59948692 None:intergenic 55.0%
TCCTGATGACATCGACGAGG+AGG - chr1_3:59948922-59948941 Msa0129880:intron 55.0%
TCCTCCTCGTCGATGTCATC+AGG + chr1_3:59948926-59948945 None:intergenic 55.0%
GACGAGGAGGATCTTATGGG+TGG - chr1_3:59948935-59948954 Msa0129880:intron 55.0%
TGATGCGCTGGAAGCAGACA+TGG - chr1_3:59949714-59949733 Msa0129880:intron 55.0%
! GGCACTGCTGTTTGTCCTGT+AGG + chr1_3:59949823-59949842 None:intergenic 55.0%
GGACAAACAGCAGTGCCACA+TGG - chr1_3:59949826-59949845 Msa0129880:intron 55.0%
GAAAAACGCCTCCCCACTAG+TGG - chr1_3:59948132-59948151 Msa0129880:intron 55.0%
CACTAGGCTCCCACCATTGA+AGG + chr1_3:59948191-59948210 None:intergenic 55.0%
TGCCTACCTCACGAGAGGTA+GGG - chr1_3:59948467-59948486 Msa0129880:intron 55.0%
TTTGTCCCCTACCTCTCGTG+AGG + chr1_3:59948476-59948495 None:intergenic 55.0%
CACGAGAGGTAGGGGACAAA+TGG - chr1_3:59948476-59948495 Msa0129880:intron 55.0%
ATCTGAAAAGGAGGGGTGGG+GGG + chr1_3:59948672-59948691 None:intergenic 55.0%
CATCTGAAAAGGAGGGGTGG+GGG + chr1_3:59948673-59948692 None:intergenic 55.0%
TCCTGATGACATCGACGAGG+AGG - chr1_3:59948922-59948941 Msa0129880:intron 55.0%
TCCTCCTCGTCGATGTCATC+AGG + chr1_3:59948926-59948945 None:intergenic 55.0%
GACGAGGAGGATCTTATGGG+TGG - chr1_3:59948935-59948954 Msa0129880:intron 55.0%
TGATGCGCTGGAAGCAGACA+TGG - chr1_3:59949714-59949733 Msa0129880:intron 55.0%
! GGCACTGCTGTTTGTCCTGT+AGG + chr1_3:59949823-59949842 None:intergenic 55.0%
GGACAAACAGCAGTGCCACA+TGG - chr1_3:59949826-59949845 Msa0129880:intron 55.0%
TCTGCTGCCTACCTCACGAG+AGG - chr1_3:59948462-59948481 Msa0129880:intron 60.0%
CTGCCTACCTCACGAGAGGT+AGG - chr1_3:59948466-59948485 Msa0129880:intron 60.0%
GCCTACCTCACGAGAGGTAG+GGG - chr1_3:59948468-59948487 Msa0129880:intron 60.0%
TCCCCTACCTCTCGTGAGGT+AGG + chr1_3:59948472-59948491 None:intergenic 60.0%
!! TGGGCATTGGCTCTGCCATG+TGG + chr1_3:59949844-59949863 None:intergenic 60.0%
TGGGTTTACCTGCCGTCCCT+CGG - chr1_3:59950517-59950536 Msa0129880:intron 60.0%
TCTGCTGCCTACCTCACGAG+AGG - chr1_3:59948462-59948481 Msa0129880:intron 60.0%
CTGCCTACCTCACGAGAGGT+AGG - chr1_3:59948466-59948485 Msa0129880:intron 60.0%
GCCTACCTCACGAGAGGTAG+GGG - chr1_3:59948468-59948487 Msa0129880:intron 60.0%
TCCCCTACCTCTCGTGAGGT+AGG + chr1_3:59948472-59948491 None:intergenic 60.0%
!! TGGGCATTGGCTCTGCCATG+TGG + chr1_3:59949844-59949863 None:intergenic 60.0%
TGGGTTTACCTGCCGTCCCT+CGG - chr1_3:59950517-59950536 Msa0129880:intron 60.0%
GTCACGTCCCACTAGTGGGG+AGG + chr1_3:59948143-59948162 None:intergenic 65.0%
AGGGGTGGGGGGAAGGAAAG+AGG + chr1_3:59948661-59948680 None:intergenic 65.0%
GAAAAGGAGGGGTGGGGGGA+AGG + chr1_3:59948668-59948687 None:intergenic 65.0%
GGGTTTACCTGCCGTCCCTC+GGG - chr1_3:59950518-59950537 Msa0129880:intron 65.0%
AACCGCGTAGGGATGCCCGA+GGG + chr1_3:59950536-59950555 None:intergenic 65.0%
TAACCGCGTAGGGATGCCCG+AGG + chr1_3:59950537-59950556 None:intergenic 65.0%
GTCACGTCCCACTAGTGGGG+AGG + chr1_3:59948143-59948162 None:intergenic 65.0%
AGGGGTGGGGGGAAGGAAAG+AGG + chr1_3:59948661-59948680 None:intergenic 65.0%
GAAAAGGAGGGGTGGGGGGA+AGG + chr1_3:59948668-59948687 None:intergenic 65.0%
GGGTTTACCTGCCGTCCCTC+GGG - chr1_3:59950518-59950537 Msa0129880:intron 65.0%
AACCGCGTAGGGATGCCCGA+GGG + chr1_3:59950536-59950555 None:intergenic 65.0%
TAACCGCGTAGGGATGCCCG+AGG + chr1_3:59950537-59950556 None:intergenic 65.0%
GCGTAGGGATGCCCGAGGGA+CGG + chr1_3:59950532-59950551 None:intergenic 70.0%
GTCCCTCGGGCATCCCTACG+CGG - chr1_3:59950531-59950550 Msa0129880:intron 70.0%
GCGTAGGGATGCCCGAGGGA+CGG + chr1_3:59950532-59950551 None:intergenic 70.0%
GTCCCTCGGGCATCCCTACG+CGG - chr1_3:59950531-59950550 Msa0129880:intron 70.0%
AGGGATGCCCGAGGGACGGC+AGG + chr1_3:59950528-59950547 None:intergenic 75.0%
AGGGATGCCCGAGGGACGGC+AGG + chr1_3:59950528-59950547 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 59946818 59950906 59946818 ID=Msa0129880;Name=Msa0129880
chr1_3 mRNA 59946818 59950906 59946818 ID=Msa0129880-mRNA-1;Parent=Msa0129880;Name=Msa0129880-mRNA-1;_AED=0.22;_eAED=0.22;_QI=250|1|1|1|1|1|7|349|234
chr1_3 exon 59946818 59947220 59946818 ID=Msa0129880-mRNA-1:exon:19653;Parent=Msa0129880-mRNA-1
chr1_3 exon 59947860 59948014 59947860 ID=Msa0129880-mRNA-1:exon:19652;Parent=Msa0129880-mRNA-1
chr1_3 exon 59948768 59948879 59948768 ID=Msa0129880-mRNA-1:exon:19651;Parent=Msa0129880-mRNA-1
chr1_3 exon 59948963 59949034 59948963 ID=Msa0129880-mRNA-1:exon:19650;Parent=Msa0129880-mRNA-1
chr1_3 exon 59949926 59950019 59949926 ID=Msa0129880-mRNA-1:exon:19649;Parent=Msa0129880-mRNA-1
chr1_3 exon 59950307 59950455 59950307 ID=Msa0129880-mRNA-1:exon:19648;Parent=Msa0129880-mRNA-1
chr1_3 exon 59950588 59950906 59950588 ID=Msa0129880-mRNA-1:exon:19647;Parent=Msa0129880-mRNA-1
chr1_3 five_prime_UTR 59950657 59950906 59950657 ID=Msa0129880-mRNA-1:five_prime_utr;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59950588 59950656 59950588 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59950307 59950455 59950307 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59949926 59950019 59949926 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59948963 59949034 59948963 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59948768 59948879 59948768 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59947860 59948014 59947860 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 CDS 59947167 59947220 59947167 ID=Msa0129880-mRNA-1:cds;Parent=Msa0129880-mRNA-1
chr1_3 three_prime_UTR 59946818 59947166 59946818 ID=Msa0129880-mRNA-1:three_prime_utr;Parent=Msa0129880-mRNA-1
Gene Sequence

>Msa0129880

ATGAAAAGAGTCTTCGGTGTCAAAGCGAAAAAGGAACCCCCTCCTTCAATTGAAGATGCCAACGAAAGGATTACCAAACGAGGTGATACGGTGGATGAGAAAATTAAGAAGCTTGATGTAGAACTCAATAGATACAAAGAACAGATTAAGAAAACAAGAGGTCCTGCTCAGGATGCTGTTAAAGCTAGAGCCATGCGGGTTCTTAAACAAAAGCGAATGTATGAAGGTCAACGTGATATGCTGTACAATCAGACGTTCAATCTTGATCAAGTTCAATTTGCTGCTGAGGGAATTAAAGATGCTCAACAAACTATGTCAGCTTTGAAGTCTGCCAACAAGGATTTGAAGGGAATGATGAAAACTGTGAAGATCCAAGACATTGATAACTTGCAAGATGAGATGATGGACCTGATGGATGTAAGTAATGAAATCCAAGAGACTTTGGGTAGAAGCTATAGTGTTCCTGATGACATCGACGAGGAGGATCTTATGGGTGAACTTGATGCGCTGGAAGCAGACATGGAAAATGAATCTGAAGGAGTCCCCTCCTACCTCCAACCTGATAAAGAATCTGATTTTGACTCGGAGCTTAACTTGCCTTCAGCTCCTACAGGACAAACAGCAGTGCCACATGGCAGAGCCAATGCCCAAACTGAAGATGAACTGGGTTTACCTGCCGTCCCTCGGGCATCCCTACGCGGTTAA
Protein sequence

>Msa0129880

MKRVFGVKAKKEPPPSIEDANERITKRGDTVDEKIKKLDVELNRYKEQIKKTRGPAQDAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFAAEGIKDAQQTMSALKSANKDLKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYSVPDDIDEEDLMGELDALEADMENESEGVPSYLQPDKESDFDSELNLPSAPTGQTAVPHGRANAQTEDELGLPAVPRASLRG*