AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0149230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0149230 MtrunA17_Chr1g0147821 84.817 191 21 3 1 184 1 190 1.93e-68 206
Msa0149230 MtrunA17_Chr8g0365051 67.914 187 44 6 1 174 1 184 5.21e-58 180
Msa0149230 MtrunA17_Chr3g0139061 79.310 116 17 2 1 110 1 115 9.61e-47 152
Msa0149230 MtrunA17_Chr7g0269331 43.023 86 45 2 4 87 9 92 1.89e-11 61.2
Msa0149230 MtrunA17_Chr7g0263341 31.674 221 87 7 2 166 11 223 9.84e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0149230 AT4G31580.2 64.179 201 54 4 1 184 1 200 1.82e-55 174
Msa0149230 AT4G31580.1 64.179 201 54 4 1 184 1 200 1.82e-55 174
Msa0149230 AT2G24590.1 65.306 196 56 2 1 184 1 196 7.54e-54 170
Msa0149230 AT1G23860.4 55.026 189 62 6 1 173 1 182 1.58e-38 130
Msa0149230 AT1G23860.1 53.886 193 62 6 1 173 1 186 2.72e-38 130
Msa0149230 AT1G23860.2 53.886 193 62 6 1 173 1 186 2.72e-38 130
Msa0149230 AT1G23860.3 65.455 110 32 2 1 110 1 104 6.08e-37 126
Msa0149230 AT3G53500.2 34.468 235 90 9 2 175 11 242 2.89e-14 69.7
Msa0149230 AT1G60650.2 37.903 124 65 4 2 114 12 134 3.76e-13 66.6
Msa0149230 AT1G60650.1 37.903 124 65 4 2 114 12 134 3.76e-13 66.6
Msa0149230 AT1G02840.1 46.667 75 31 3 4 71 9 81 1.17e-11 62.4
Msa0149230 AT1G02840.4 46.667 75 31 3 4 71 9 81 1.88e-11 61.6
Msa0149230 AT1G02840.5 46.667 75 31 3 4 71 9 81 1.88e-11 61.6
Msa0149230 AT1G02840.3 46.667 75 31 3 4 71 9 81 1.88e-11 61.6
Msa0149230 AT2G37340.1 38.168 131 58 4 2 112 11 138 2.62e-11 61.2
Msa0149230 AT1G02840.2 46.667 75 31 3 4 71 9 81 3.56e-11 60.8

Find 79 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGGGAATAGTGAGATTT+TGG 0.237194 1_4:+9821883 Msa0149230:three_prime_UTR
GGTGGTGGCGGCGGCGGTGG+TGG 0.290525 1_4:+9820706 Msa0149230:CDS
AGGTGACACGCTGCGGCGCC+TGG 0.293523 1_4:-9821283 None:intergenic
GGTGGCGGCGGCGGTGGTGG+AGG 0.354991 1_4:+9820709 Msa0149230:CDS
AGTGGTGGTGGCGGCGGCGG+TGG 0.365151 1_4:+9820703 Msa0149230:CDS
GTATATGCAGAAATGGCATT+AGG 0.366155 1_4:+9821810 Msa0149230:intron
TCGTGTGTACGTGGGTAATC+TGG 0.366370 1_4:+9818289 Msa0149230:CDS
TGCGACATTCACGAGCAAAA+TGG 0.370957 1_4:-9820792 None:intergenic
TTCAAAATTAACTTCTGCTT+CGG 0.370967 1_4:-9821841 None:intergenic
CGTGGTCGTGGCGGCGGCGG+CGG 0.385772 1_4:+9820733 Msa0149230:CDS
TCGTGTTCTCGCCGCTAGCT+AGG 0.390310 1_4:+9818036 Msa0149230:five_prime_UTR
GAGGAGGTGCCATATGCTAA+TGG 0.408138 1_4:+9821351 Msa0149230:CDS
AGAAGTGGTGGTGGCGGCGG+CGG 0.411462 1_4:+9820700 Msa0149230:CDS
ATGTTGTGTTTGCAGTGTTT+GGG 0.412023 1_4:+9819221 Msa0149230:intron
GGAGGTCGTGGTCGTGGCGG+CGG 0.422133 1_4:+9820727 Msa0149230:CDS
GGTCGTGGTCGTGGCGGCGG+CGG 0.428487 1_4:+9820730 Msa0149230:CDS
TATATGCAGAAATGGCATTA+GGG 0.429730 1_4:+9821811 Msa0149230:intron
CGTGTTCTCGCCGCTAGCTA+GGG 0.437073 1_4:+9818037 Msa0149230:five_prime_UTR
GGTGACACGCTGCGGCGCCT+GGG 0.452893 1_4:-9821282 None:intergenic
GGCGGCGGTGGTGGAGGTCG+TGG 0.460146 1_4:+9820715 Msa0149230:CDS
GTGACACGCTGCGGCGCCTG+GGG 0.468230 1_4:-9821281 None:intergenic
TCTAGAAGTGGTGGTGGCGG+CGG 0.468832 1_4:+9820697 Msa0149230:CDS
GGTGGTGGAGGTCGTGGTCG+TGG 0.472836 1_4:+9820721 Msa0149230:CDS
TCGAGGTGGAACTGCGGCTA+CGG 0.487267 1_4:-9820843 None:intergenic
AGGAGGTGCCATATGCTAAT+GGG 0.493730 1_4:+9821352 Msa0149230:CDS
ATAACTAACCCATTAGCATA+TGG 0.508636 1_4:-9821360 None:intergenic
GATGCTATACGCGATCTAGA+TGG 0.514035 1_4:+9819303 Msa0149230:CDS
CAGTTCCACCTCGATTTCGC+AGG 0.515043 1_4:+9820852 Msa0149230:CDS
TGTTATGAGTGTGGTGAACC+TGG 0.515250 1_4:+9820769 Msa0149230:CDS
ACCTCCTCACGCCCACGGTA+AGG 0.515427 1_4:-9821336 None:intergenic
AACGATGTCTCGTGTGTACG+TGG 0.515828 1_4:+9818280 Msa0149230:exon
ATTAACTTCTGCTTCGGCGT+CGG 0.515869 1_4:-9821835 None:intergenic
GTCAGTGAGAGCAATTATTG+AGG 0.526754 1_4:+9821866 Msa0149230:three_prime_UTR
TGTCGCAATCGTGGTGGTGG+TGG 0.529392 1_4:+9820808 Msa0149230:CDS
CAAGTATTAAGCAAAGATAC+AGG 0.533148 1_4:-9822010 None:intergenic
TTCTGTGTAACAGGCAAGAA+TGG 0.536794 1_4:+9820650 Msa0149230:intron
AATTCTAGAAGTGGTGGTGG+CGG 0.541335 1_4:+9820694 Msa0149230:CDS
TGATGACCGCAGAGATGCAC+AGG 0.545051 1_4:+9819281 Msa0149230:CDS
TCCTTACCGTGGGCGTGAGG+AGG 0.547639 1_4:+9821335 Msa0149230:CDS
TGGGTTGCTCGAAGACCACC+TGG 0.550517 1_4:+9819240 Msa0149230:CDS
CACAATTCTAGAAGTGGTGG+TGG 0.553562 1_4:+9820691 Msa0149230:CDS
TCACGCCCACGGTAAGGAGG+TGG 0.554871 1_4:-9821330 None:intergenic
TCAGTGAGAGCAATTATTGA+GGG 0.555148 1_4:+9821867 Msa0149230:three_prime_UTR
CTTTCTCACAATTCTAGAAG+TGG 0.557618 1_4:+9820685 Msa0149230:CDS
GTGTAACAGGCAAGAATGGT+TGG 0.559187 1_4:+9820654 Msa0149230:intron
CATTCACGAGCAAAATGGCC+AGG 0.561096 1_4:-9820787 None:intergenic
GAATGTCGCAATCGTGGTGG+TGG 0.564770 1_4:+9820805 Msa0149230:CDS
AGTCTCAGAGAGGGACCTTG+AGG 0.566930 1_4:+9818319 Msa0149230:CDS
ACCTCCTTACCGTGGGCGTG+AGG 0.571158 1_4:+9821332 Msa0149230:CDS
CTCGTGGACGTAGCTACAGC+AGG 0.573406 1_4:+9821304 Msa0149230:CDS
AAGTCAATAAAAGCATAGCC+AGG 0.586577 1_4:-9819258 None:intergenic
AAGCAATTACTTAAAATAGA+CGG 0.590512 1_4:-9822051 None:intergenic
CGCCGCAGCGTGTCACCTCG+TGG 0.590625 1_4:+9821288 Msa0149230:CDS
CTTGGACTCCTGCGAAATCG+AGG 0.595739 1_4:-9820860 None:intergenic
GATTTGAAGTGTTATGAGTG+TGG 0.598609 1_4:+9820760 Msa0149230:CDS
TCTCACAATTCTAGAAGTGG+TGG 0.600012 1_4:+9820688 Msa0149230:CDS
AGGTCACCACCTCCTTACCG+TGG 0.601922 1_4:+9821324 Msa0149230:CDS
TAACAGGCAAGAATGGTTGG+AGG 0.608447 1_4:+9820657 Msa0149230:intron
GCTCGTGAATGTCGCAATCG+TGG 0.611165 1_4:+9820799 Msa0149230:CDS
GGTGGAGGTCGTGGTCGTGG+CGG 0.619805 1_4:+9820724 Msa0149230:CDS
TCCTCACGCCCACGGTAAGG+AGG 0.623016 1_4:-9821333 None:intergenic
CCAGGAGTTACAGTCCTCGT+GGG 0.630414 1_4:+9821253 Msa0149230:intron
ACCAGGAGTTACAGTCCTCG+TGG 0.630825 1_4:+9821252 Msa0149230:intron
GGTCACCACCTCCTTACCGT+GGG 0.634356 1_4:+9821325 Msa0149230:CDS
ATGGCACCTCCTCACGCCCA+CGG 0.635291 1_4:-9821341 None:intergenic
AAACACGAAATTCATCCTCA+AGG 0.640455 1_4:-9818334 None:intergenic
GGAGTTACAGTCCTCGTGGG+CGG 0.645283 1_4:+9821256 Msa0149230:intron
GGACTCCTGCGAAATCGAGG+TGG 0.649745 1_4:-9820857 None:intergenic
ACGATGTCTCGTGTGTACGT+GGG 0.656849 1_4:+9818281 Msa0149230:exon
GGATTCTAGAGTCTCAGAGA+GGG 0.661005 1_4:+9818310 Msa0149230:CDS
AACAGGCAAGAATGGTTGGA+GGG 0.663974 1_4:+9820658 Msa0149230:intron
GTCCACGAGGTGACACGCTG+CGG 0.671063 1_4:-9821290 None:intergenic
TGACACGCTGCGGCGCCTGG+GGG 0.679479 1_4:-9821280 None:intergenic
CTGCTGTAGCTACGTCCACG+AGG 0.684355 1_4:-9821303 None:intergenic
CGTGAATGTCGCAATCGTGG+TGG 0.699969 1_4:+9820802 Msa0149230:CDS
TGGATTCTAGAGTCTCAGAG+AGG 0.702659 1_4:+9818309 Msa0149230:CDS
TCAATAAAAGCATAGCCAGG+TGG 0.704252 1_4:-9819255 None:intergenic
TAGCATCCTGTGCATCTCTG+CGG 0.708826 1_4:-9819287 None:intergenic
GCGAAATCGAGGTGGAACTG+CGG 0.748740 1_4:-9820849 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGAAGAAAAAAAAAAT+TGG + chr1_4:9818576-9818595 Msa0149230:intron 10.0%
!!! ATAAAAATTATGTTTTTGTA+TGG + chr1_4:9819104-9819123 Msa0149230:intron 10.0%
!!! TAAAAATTATGTTTTTGTAT+GGG + chr1_4:9819105-9819124 Msa0149230:intron 10.0%
!! TTAAAGAAGAAAAAAAAAAT+TGG + chr1_4:9818576-9818595 Msa0149230:intron 10.0%
!!! ATAAAAATTATGTTTTTGTA+TGG + chr1_4:9819104-9819123 Msa0149230:intron 10.0%
!!! TAAAAATTATGTTTTTGTAT+GGG + chr1_4:9819105-9819124 Msa0149230:intron 10.0%
!! AAACTAAAAAGATGAAAATT+TGG - chr1_4:9818205-9818224 None:intergenic 15.0%
!! AGAAAAAAAAAATTGGAAAT+AGG + chr1_4:9818583-9818602 Msa0149230:intron 15.0%
!! GAAAAAAAAAATTGGAAATA+GGG + chr1_4:9818584-9818603 Msa0149230:intron 15.0%
!!! TTTGTGTTGATTATTTTTAA+TGG + chr1_4:9818984-9819003 Msa0149230:intron 15.0%
!!! AATTATGATTAATCTTGTTT+TGG + chr1_4:9819180-9819199 Msa0149230:intron 15.0%
!!! TATATTTTTAACCTTGAAAA+AGG - chr1_4:9820522-9820541 None:intergenic 15.0%
!! ATTCTTAATTATTATTGAAG+TGG + chr1_4:9821055-9821074 Msa0149230:intron 15.0%
!! ACAAATAAACATTATATAGT+TGG + chr1_4:9821697-9821716 Msa0149230:intron 15.0%
!! AAACTAAAAAGATGAAAATT+TGG - chr1_4:9818205-9818224 None:intergenic 15.0%
!! AGAAAAAAAAAATTGGAAAT+AGG + chr1_4:9818583-9818602 Msa0149230:intron 15.0%
!! GAAAAAAAAAATTGGAAATA+GGG + chr1_4:9818584-9818603 Msa0149230:intron 15.0%
!!! TTTGTGTTGATTATTTTTAA+TGG + chr1_4:9818984-9819003 Msa0149230:intron 15.0%
!!! AATTATGATTAATCTTGTTT+TGG + chr1_4:9819180-9819199 Msa0149230:intron 15.0%
!!! TATATTTTTAACCTTGAAAA+AGG - chr1_4:9820522-9820541 None:intergenic 15.0%
!! ATTCTTAATTATTATTGAAG+TGG + chr1_4:9821055-9821074 Msa0149230:intron 15.0%
!! ACAAATAAACATTATATAGT+TGG + chr1_4:9821697-9821716 Msa0149230:intron 15.0%
!! AAAAAGATGAAAATTTGGTT+TGG - chr1_4:9818200-9818219 None:intergenic 20.0%
!!! TAACTTGATTTTTCATGTAA+AGG + chr1_4:9818474-9818493 Msa0149230:intron 20.0%
!! TAAATTGAATTCTCAAAAGT+TGG - chr1_4:9818880-9818899 None:intergenic 20.0%
!! TGGCACTTTAATAATATATA+TGG - chr1_4:9819365-9819384 None:intergenic 20.0%
!! AATAACTTCGGAAAATATTA+TGG + chr1_4:9819864-9819883 Msa0149230:intron 20.0%
!!! TGCTTAATTTTCTTGAAATT+TGG + chr1_4:9819971-9819990 Msa0149230:intron 20.0%
!! TTAATTGAATATAAACGTGT+CGG + chr1_4:9820171-9820190 Msa0149230:intron 20.0%
!! AATATATCTGCAACATTAAA+CGG - chr1_4:9820356-9820375 None:intergenic 20.0%
!! AAAATACCACAATAAAACAT+TGG - chr1_4:9820950-9820969 None:intergenic 20.0%
!!! ATTTTTCTTAATGATCATGT+AGG + chr1_4:9820965-9820984 Msa0149230:intron 20.0%
!!! TTTTTCTTAATGATCATGTA+GGG + chr1_4:9820966-9820985 Msa0149230:intron 20.0%
!!! AAAGCATTATTACAAAAAGT+AGG - chr1_4:9821007-9821026 None:intergenic 20.0%
!!! TTTTTGTAATAATGCTTTTG+TGG + chr1_4:9821009-9821028 Msa0149230:intron 20.0%
!!! ATTCTAAGGTATAAAATAGT+AGG - chr1_4:9821104-9821123 None:intergenic 20.0%
!! GCTTAGTATGAAAAATTTAA+GGG - chr1_4:9821391-9821410 None:intergenic 20.0%
!! TGCTTAGTATGAAAAATTTA+AGG - chr1_4:9821392-9821411 None:intergenic 20.0%
!! AAAATATCACCAAGTTAAAA+TGG + chr1_4:9821550-9821569 Msa0149230:intron 20.0%
!! AAATATCACCAAGTTAAAAT+GGG + chr1_4:9821551-9821570 Msa0149230:intron 20.0%
!! GTAAATATGCTTATTAAGTA+CGG - chr1_4:9821646-9821665 None:intergenic 20.0%
!! CTAATATACAGACATAATAA+AGG - chr1_4:9821668-9821687 None:intergenic 20.0%
!! AATAAACATTATATAGTTGG+AGG + chr1_4:9821700-9821719 Msa0149230:intron 20.0%
!! AAATTAACATAAATCACATG+CGG - chr1_4:9821726-9821745 None:intergenic 20.0%
!! ATTTCTGCATATACATTATT+TGG - chr1_4:9821804-9821823 None:intergenic 20.0%
!! AAATAATGTATATGCAGAAA+TGG + chr1_4:9821803-9821822 Msa0149230:intron 20.0%
!!! AATATGAATCTGTTTTGTTT+GGG + chr1_4:9821924-9821943 Msa0149230:three_prime_UTR 20.0%
!! AAGCAATTACTTAAAATAGA+CGG - chr1_4:9822054-9822073 None:intergenic 20.0%
!! AAAAAGATGAAAATTTGGTT+TGG - chr1_4:9818200-9818219 None:intergenic 20.0%
!!! TAACTTGATTTTTCATGTAA+AGG + chr1_4:9818474-9818493 Msa0149230:intron 20.0%
!! TAAATTGAATTCTCAAAAGT+TGG - chr1_4:9818880-9818899 None:intergenic 20.0%
!! TGGCACTTTAATAATATATA+TGG - chr1_4:9819365-9819384 None:intergenic 20.0%
!! AATAACTTCGGAAAATATTA+TGG + chr1_4:9819864-9819883 Msa0149230:intron 20.0%
!!! TGCTTAATTTTCTTGAAATT+TGG + chr1_4:9819971-9819990 Msa0149230:intron 20.0%
!! TTAATTGAATATAAACGTGT+CGG + chr1_4:9820171-9820190 Msa0149230:intron 20.0%
!! AATATATCTGCAACATTAAA+CGG - chr1_4:9820356-9820375 None:intergenic 20.0%
!! AAAATACCACAATAAAACAT+TGG - chr1_4:9820950-9820969 None:intergenic 20.0%
!!! ATTTTTCTTAATGATCATGT+AGG + chr1_4:9820965-9820984 Msa0149230:intron 20.0%
!!! TTTTTCTTAATGATCATGTA+GGG + chr1_4:9820966-9820985 Msa0149230:intron 20.0%
!!! AAAGCATTATTACAAAAAGT+AGG - chr1_4:9821007-9821026 None:intergenic 20.0%
!!! TTTTTGTAATAATGCTTTTG+TGG + chr1_4:9821009-9821028 Msa0149230:intron 20.0%
!!! ATTCTAAGGTATAAAATAGT+AGG - chr1_4:9821104-9821123 None:intergenic 20.0%
!! GCTTAGTATGAAAAATTTAA+GGG - chr1_4:9821391-9821410 None:intergenic 20.0%
!! TGCTTAGTATGAAAAATTTA+AGG - chr1_4:9821392-9821411 None:intergenic 20.0%
!! AAAATATCACCAAGTTAAAA+TGG + chr1_4:9821550-9821569 Msa0149230:intron 20.0%
!! AAATATCACCAAGTTAAAAT+GGG + chr1_4:9821551-9821570 Msa0149230:intron 20.0%
!! GTAAATATGCTTATTAAGTA+CGG - chr1_4:9821646-9821665 None:intergenic 20.0%
!! CTAATATACAGACATAATAA+AGG - chr1_4:9821668-9821687 None:intergenic 20.0%
!! AATAAACATTATATAGTTGG+AGG + chr1_4:9821700-9821719 Msa0149230:intron 20.0%
!! AAATTAACATAAATCACATG+CGG - chr1_4:9821726-9821745 None:intergenic 20.0%
!! ATTTCTGCATATACATTATT+TGG - chr1_4:9821804-9821823 None:intergenic 20.0%
!! AAATAATGTATATGCAGAAA+TGG + chr1_4:9821803-9821822 Msa0149230:intron 20.0%
!!! AATATGAATCTGTTTTGTTT+GGG + chr1_4:9821924-9821943 Msa0149230:three_prime_UTR 20.0%
!! AAGCAATTACTTAAAATAGA+CGG - chr1_4:9822054-9822073 None:intergenic 20.0%
! TATTATCATAAAGCTTGTCA+AGG - chr1_4:9818776-9818795 None:intergenic 25.0%
! TCAAAAATAAGTCAATCCAA+AGG + chr1_4:9818835-9818854 Msa0149230:intron 25.0%
! ATTTATTGAAATCACAGACA+TGG - chr1_4:9819020-9819039 None:intergenic 25.0%
! GAGAAACACAATAAAATTGT+TGG + chr1_4:9819047-9819066 Msa0149230:intron 25.0%
!!! ACAATAAAATTGTTGGTTTC+TGG + chr1_4:9819054-9819073 Msa0149230:intron 25.0%
!!! CTGTGTTCATTATTTTTCAT+GGG + chr1_4:9819128-9819147 Msa0149230:intron 25.0%
! TAATGTCATAGTAATATGCA+TGG - chr1_4:9819385-9819404 None:intergenic 25.0%
!! GATTGGTGTTTAAATAACTT+CGG + chr1_4:9819852-9819871 Msa0149230:intron 25.0%
! GAACTCTTCATATTGAAATA+AGG + chr1_4:9820042-9820061 Msa0149230:intron 25.0%
! TATGTAAGTATTTATCTCAG+AGG + chr1_4:9820231-9820250 Msa0149230:intron 25.0%
! ATATATCTGCAACATTAAAC+GGG - chr1_4:9820355-9820374 None:intergenic 25.0%
! GGTATTAAACAGGTAAATAT+TGG - chr1_4:9820451-9820470 None:intergenic 25.0%
! TAGCAAAAGGATTATCATAT+TGG - chr1_4:9820493-9820512 None:intergenic 25.0%
! TAGTTATTATTGTCGCTATT+TGG + chr1_4:9821412-9821431 Msa0149230:intron 25.0%
!!! TTAAAATGGGTAATTTGCTT+TGG + chr1_4:9821564-9821583 Msa0149230:intron 25.0%
!!! TAAAATGGGTAATTTGCTTT+GGG + chr1_4:9821565-9821584 Msa0149230:intron 25.0%
! AGTATGTTCATAAGAAACTT+GGG - chr1_4:9821621-9821640 None:intergenic 25.0%
! AAGTATGTTCATAAGAAACT+TGG - chr1_4:9821622-9821641 None:intergenic 25.0%
! TTCAAAATTAACTTCTGCTT+CGG - chr1_4:9821844-9821863 None:intergenic 25.0%
!!! GAATATGAATCTGTTTTGTT+TGG + chr1_4:9821923-9821942 Msa0149230:three_prime_UTR 25.0%
! TATTATCATAAAGCTTGTCA+AGG - chr1_4:9818776-9818795 None:intergenic 25.0%
! TCAAAAATAAGTCAATCCAA+AGG + chr1_4:9818835-9818854 Msa0149230:intron 25.0%
! ATTTATTGAAATCACAGACA+TGG - chr1_4:9819020-9819039 None:intergenic 25.0%
! GAGAAACACAATAAAATTGT+TGG + chr1_4:9819047-9819066 Msa0149230:intron 25.0%
!!! ACAATAAAATTGTTGGTTTC+TGG + chr1_4:9819054-9819073 Msa0149230:intron 25.0%
!!! CTGTGTTCATTATTTTTCAT+GGG + chr1_4:9819128-9819147 Msa0149230:intron 25.0%
! TAATGTCATAGTAATATGCA+TGG - chr1_4:9819385-9819404 None:intergenic 25.0%
!! GATTGGTGTTTAAATAACTT+CGG + chr1_4:9819852-9819871 Msa0149230:intron 25.0%
! GAACTCTTCATATTGAAATA+AGG + chr1_4:9820042-9820061 Msa0149230:intron 25.0%
! TATGTAAGTATTTATCTCAG+AGG + chr1_4:9820231-9820250 Msa0149230:intron 25.0%
! ATATATCTGCAACATTAAAC+GGG - chr1_4:9820355-9820374 None:intergenic 25.0%
! GGTATTAAACAGGTAAATAT+TGG - chr1_4:9820451-9820470 None:intergenic 25.0%
! TAGCAAAAGGATTATCATAT+TGG - chr1_4:9820493-9820512 None:intergenic 25.0%
! TAGTTATTATTGTCGCTATT+TGG + chr1_4:9821412-9821431 Msa0149230:intron 25.0%
!!! TTAAAATGGGTAATTTGCTT+TGG + chr1_4:9821564-9821583 Msa0149230:intron 25.0%
!!! TAAAATGGGTAATTTGCTTT+GGG + chr1_4:9821565-9821584 Msa0149230:intron 25.0%
! AGTATGTTCATAAGAAACTT+GGG - chr1_4:9821621-9821640 None:intergenic 25.0%
! AAGTATGTTCATAAGAAACT+TGG - chr1_4:9821622-9821641 None:intergenic 25.0%
! TTCAAAATTAACTTCTGCTT+CGG - chr1_4:9821844-9821863 None:intergenic 25.0%
!!! GAATATGAATCTGTTTTGTT+TGG + chr1_4:9821923-9821942 Msa0149230:three_prime_UTR 25.0%
!!! TCCATACTGTTTTGATTTGT+AGG + chr1_4:9818239-9818258 Msa0149230:intron 30.0%
ACCTACAAATCAAAACAGTA+TGG - chr1_4:9818243-9818262 None:intergenic 30.0%
AAAAAATTGGAAATAGGGTC+TGG + chr1_4:9818589-9818608 Msa0149230:intron 30.0%
TAAAATAAGCCAATCCAAAC+AGG - chr1_4:9818653-9818672 None:intergenic 30.0%
!! AGTTGGCATCTTTAAGATAA+GGG - chr1_4:9818863-9818882 None:intergenic 30.0%
!! AAGTTGGCATCTTTAAGATA+AGG - chr1_4:9818864-9818883 None:intergenic 30.0%
!! GCTGTGTTCATTATTTTTCA+TGG + chr1_4:9819127-9819146 Msa0149230:intron 30.0%
! TTTGGAATCTTCAATTCTCA+TGG + chr1_4:9819198-9819217 Msa0149230:intron 30.0%
!!! TTTTTTTTTCACCCCTTTTC+CGG + chr1_4:9819426-9819445 Msa0149230:intron 30.0%
GACTTAAATATGAAGAGTTG+AGG - chr1_4:9819472-9819491 None:intergenic 30.0%
ACAATTAACAATGTGAACTG+AGG + chr1_4:9819600-9819619 Msa0149230:intron 30.0%
ATGAATCAAACAACATCACA+AGG - chr1_4:9820018-9820037 None:intergenic 30.0%
!!! TCATTTTTTCAAAGTATCGC+CGG - chr1_4:9820150-9820169 None:intergenic 30.0%
! AGGATTATCATATTGGTGTT+AGG - chr1_4:9820486-9820505 None:intergenic 30.0%
AAAAAGGAACATCTAGCAAA+AGG - chr1_4:9820506-9820525 None:intergenic 30.0%
TTCTCATAAATCTAGTCACA+TGG + chr1_4:9820577-9820596 Msa0149230:intron 30.0%
TCATTTGTATTCTGTGTAAC+AGG + chr1_4:9820641-9820660 Msa0149230:intron 30.0%
CAAGGCTCAAATGAAAATAA+AGG - chr1_4:9820910-9820929 None:intergenic 30.0%
!!! CTTTATTTTCATTTGAGCCT+TGG + chr1_4:9820908-9820927 Msa0149230:intron 30.0%
CAGAGATAAGCATAATTCTA+AGG - chr1_4:9821118-9821137 None:intergenic 30.0%
! TATCCATGTCATTTCTCTTA+TGG + chr1_4:9821147-9821166 Msa0149230:intron 30.0%
TCATTTCTCTTATGGTTGTT+AGG + chr1_4:9821155-9821174 Msa0149230:intron 30.0%
ATAACTAACCCATTAGCATA+TGG - chr1_4:9821363-9821382 None:intergenic 30.0%
AAATGTTCCTTGAAAAACCA+GGG - chr1_4:9821442-9821461 None:intergenic 30.0%
AAAATGTTCCTTGAAAAACC+AGG - chr1_4:9821443-9821462 None:intergenic 30.0%
!!! GCAAATTACCCATTTTAACT+TGG - chr1_4:9821562-9821581 None:intergenic 30.0%
GTATGTTCATAAGAAACTTG+GGG - chr1_4:9821620-9821639 None:intergenic 30.0%
TATATGCAGAAATGGCATTA+GGG + chr1_4:9821811-9821830 Msa0149230:intron 30.0%
! CTTGAGTTTTACTGTTGTAT+TGG + chr1_4:9821953-9821972 Msa0149230:three_prime_UTR 30.0%
CAAGTATTAAGCAAAGATAC+AGG - chr1_4:9822013-9822032 None:intergenic 30.0%
!!! TCCATACTGTTTTGATTTGT+AGG + chr1_4:9818239-9818258 Msa0149230:intron 30.0%
ACCTACAAATCAAAACAGTA+TGG - chr1_4:9818243-9818262 None:intergenic 30.0%
AAAAAATTGGAAATAGGGTC+TGG + chr1_4:9818589-9818608 Msa0149230:intron 30.0%
TAAAATAAGCCAATCCAAAC+AGG - chr1_4:9818653-9818672 None:intergenic 30.0%
!! AGTTGGCATCTTTAAGATAA+GGG - chr1_4:9818863-9818882 None:intergenic 30.0%
!! AAGTTGGCATCTTTAAGATA+AGG - chr1_4:9818864-9818883 None:intergenic 30.0%
!! GCTGTGTTCATTATTTTTCA+TGG + chr1_4:9819127-9819146 Msa0149230:intron 30.0%
! TTTGGAATCTTCAATTCTCA+TGG + chr1_4:9819198-9819217 Msa0149230:intron 30.0%
!!! TTTTTTTTTCACCCCTTTTC+CGG + chr1_4:9819426-9819445 Msa0149230:intron 30.0%
GACTTAAATATGAAGAGTTG+AGG - chr1_4:9819472-9819491 None:intergenic 30.0%
ACAATTAACAATGTGAACTG+AGG + chr1_4:9819600-9819619 Msa0149230:intron 30.0%
ATGAATCAAACAACATCACA+AGG - chr1_4:9820018-9820037 None:intergenic 30.0%
!!! TCATTTTTTCAAAGTATCGC+CGG - chr1_4:9820150-9820169 None:intergenic 30.0%
! AGGATTATCATATTGGTGTT+AGG - chr1_4:9820486-9820505 None:intergenic 30.0%
AAAAAGGAACATCTAGCAAA+AGG - chr1_4:9820506-9820525 None:intergenic 30.0%
TTCTCATAAATCTAGTCACA+TGG + chr1_4:9820577-9820596 Msa0149230:intron 30.0%
TCATTTGTATTCTGTGTAAC+AGG + chr1_4:9820641-9820660 Msa0149230:intron 30.0%
CAAGGCTCAAATGAAAATAA+AGG - chr1_4:9820910-9820929 None:intergenic 30.0%
!!! CTTTATTTTCATTTGAGCCT+TGG + chr1_4:9820908-9820927 Msa0149230:intron 30.0%
CAGAGATAAGCATAATTCTA+AGG - chr1_4:9821118-9821137 None:intergenic 30.0%
! TATCCATGTCATTTCTCTTA+TGG + chr1_4:9821147-9821166 Msa0149230:intron 30.0%
TCATTTCTCTTATGGTTGTT+AGG + chr1_4:9821155-9821174 Msa0149230:intron 30.0%
ATAACTAACCCATTAGCATA+TGG - chr1_4:9821363-9821382 None:intergenic 30.0%
AAATGTTCCTTGAAAAACCA+GGG - chr1_4:9821442-9821461 None:intergenic 30.0%
AAAATGTTCCTTGAAAAACC+AGG - chr1_4:9821443-9821462 None:intergenic 30.0%
!!! GCAAATTACCCATTTTAACT+TGG - chr1_4:9821562-9821581 None:intergenic 30.0%
GTATGTTCATAAGAAACTTG+GGG - chr1_4:9821620-9821639 None:intergenic 30.0%
TATATGCAGAAATGGCATTA+GGG + chr1_4:9821811-9821830 Msa0149230:intron 30.0%
! CTTGAGTTTTACTGTTGTAT+TGG + chr1_4:9821953-9821972 Msa0149230:three_prime_UTR 30.0%
CAAGTATTAAGCAAAGATAC+AGG - chr1_4:9822013-9822032 None:intergenic 30.0%
TGAATAGGGGTGAAAAATGA+AGG - chr1_4:9818102-9818121 None:intergenic 35.0%
ACGAAGTTTGGGAATGAATA+GGG - chr1_4:9818116-9818135 None:intergenic 35.0%
AACGAAGTTTGGGAATGAAT+AGG - chr1_4:9818117-9818136 None:intergenic 35.0%
AAGCCTAGAAATCTTAAGAG+GGG - chr1_4:9818142-9818161 None:intergenic 35.0%
GAAGCCTAGAAATCTTAAGA+GGG - chr1_4:9818143-9818162 None:intergenic 35.0%
AAACACGAAATTCATCCTCA+AGG - chr1_4:9818337-9818356 None:intergenic 35.0%
! GAGGATGAATTTCGTGTTTT+TGG + chr1_4:9818338-9818357 Msa0149230:CDS 35.0%
!!! GTGTTTTTGGTGTAATTCGA+AGG + chr1_4:9818351-9818370 Msa0149230:CDS 35.0%
AAAACATCCACACCATCAAA+AGG - chr1_4:9818617-9818636 None:intergenic 35.0%
! TTTGTTTCTTAGTGCCTGTT+TGG + chr1_4:9818636-9818655 Msa0149230:intron 35.0%
!! TCTGAGAGTTTTATGAGAAG+CGG + chr1_4:9818922-9818941 Msa0149230:intron 35.0%
ATGTTGTGTTTGCAGTGTTT+GGG + chr1_4:9819221-9819240 Msa0149230:intron 35.0%
! AAGTCAATAAAAGCATAGCC+AGG - chr1_4:9819261-9819280 None:intergenic 35.0%
TGTCTCTACATGAAGTCAAA+GGG - chr1_4:9819583-9819602 None:intergenic 35.0%
TTGTCTCTACATGAAGTCAA+AGG - chr1_4:9819584-9819603 None:intergenic 35.0%
! TGCTCTGATAAGTTTTCGAT+TGG + chr1_4:9819835-9819854 Msa0149230:intron 35.0%
AACATCACAAGGCTATATCA+AGG - chr1_4:9820007-9820026 None:intergenic 35.0%
!! TACTTACATACTCTGAAGCA+CGG - chr1_4:9820221-9820240 None:intergenic 35.0%
AAACGGGTAACAAAAAAGCT+TGG - chr1_4:9820339-9820358 None:intergenic 35.0%
ACATACTGTCTTCAAACTGA+AGG - chr1_4:9820402-9820421 None:intergenic 35.0%
TTTGAAGACAGTATGTTTGC+AGG + chr1_4:9820406-9820425 Msa0149230:intron 35.0%
TTGAAGACAGTATGTTTGCA+GGG + chr1_4:9820407-9820426 Msa0149230:intron 35.0%
!! TGCTAGATGTTCCTTTTTCA+AGG + chr1_4:9820508-9820527 Msa0149230:intron 35.0%
GAAAACGTCAGTATCAAACA+CGG + chr1_4:9820542-9820561 Msa0149230:intron 35.0%
! CTTTCTCACAATTCTAGAAG+TGG + chr1_4:9820685-9820704 Msa0149230:CDS 35.0%
! GATTTGAAGTGTTATGAGTG+TGG + chr1_4:9820760-9820779 Msa0149230:CDS 35.0%
!! TTGGCACCAATGTTTTATTG+TGG + chr1_4:9820941-9820960 Msa0149230:intron 35.0%
CAACCATAAGAGAAATGACA+TGG - chr1_4:9821153-9821172 None:intergenic 35.0%
TTCTCTTATGGTTGTTAGGT+TGG + chr1_4:9821159-9821178 Msa0149230:intron 35.0%
GTATATGCAGAAATGGCATT+AGG + chr1_4:9821810-9821829 Msa0149230:intron 35.0%
TCAGTGAGAGCAATTATTGA+GGG + chr1_4:9821867-9821886 Msa0149230:three_prime_UTR 35.0%
! TTGAGGGAATAGTGAGATTT+TGG + chr1_4:9821883-9821902 Msa0149230:three_prime_UTR 35.0%
!! GTGAGATTTTGGTCATTTAG+TGG + chr1_4:9821894-9821913 Msa0149230:three_prime_UTR 35.0%
TGAATAGGGGTGAAAAATGA+AGG - chr1_4:9818102-9818121 None:intergenic 35.0%
ACGAAGTTTGGGAATGAATA+GGG - chr1_4:9818116-9818135 None:intergenic 35.0%
AACGAAGTTTGGGAATGAAT+AGG - chr1_4:9818117-9818136 None:intergenic 35.0%
AAGCCTAGAAATCTTAAGAG+GGG - chr1_4:9818142-9818161 None:intergenic 35.0%
GAAGCCTAGAAATCTTAAGA+GGG - chr1_4:9818143-9818162 None:intergenic 35.0%
AAACACGAAATTCATCCTCA+AGG - chr1_4:9818337-9818356 None:intergenic 35.0%
! GAGGATGAATTTCGTGTTTT+TGG + chr1_4:9818338-9818357 Msa0149230:CDS 35.0%
!!! GTGTTTTTGGTGTAATTCGA+AGG + chr1_4:9818351-9818370 Msa0149230:CDS 35.0%
AAAACATCCACACCATCAAA+AGG - chr1_4:9818617-9818636 None:intergenic 35.0%
! TTTGTTTCTTAGTGCCTGTT+TGG + chr1_4:9818636-9818655 Msa0149230:intron 35.0%
!! TCTGAGAGTTTTATGAGAAG+CGG + chr1_4:9818922-9818941 Msa0149230:intron 35.0%
ATGTTGTGTTTGCAGTGTTT+GGG + chr1_4:9819221-9819240 Msa0149230:intron 35.0%
! AAGTCAATAAAAGCATAGCC+AGG - chr1_4:9819261-9819280 None:intergenic 35.0%
TGTCTCTACATGAAGTCAAA+GGG - chr1_4:9819583-9819602 None:intergenic 35.0%
TTGTCTCTACATGAAGTCAA+AGG - chr1_4:9819584-9819603 None:intergenic 35.0%
! TGCTCTGATAAGTTTTCGAT+TGG + chr1_4:9819835-9819854 Msa0149230:intron 35.0%
AACATCACAAGGCTATATCA+AGG - chr1_4:9820007-9820026 None:intergenic 35.0%
!! TACTTACATACTCTGAAGCA+CGG - chr1_4:9820221-9820240 None:intergenic 35.0%
AAACGGGTAACAAAAAAGCT+TGG - chr1_4:9820339-9820358 None:intergenic 35.0%
ACATACTGTCTTCAAACTGA+AGG - chr1_4:9820402-9820421 None:intergenic 35.0%
TTTGAAGACAGTATGTTTGC+AGG + chr1_4:9820406-9820425 Msa0149230:intron 35.0%
TTGAAGACAGTATGTTTGCA+GGG + chr1_4:9820407-9820426 Msa0149230:intron 35.0%
!! TGCTAGATGTTCCTTTTTCA+AGG + chr1_4:9820508-9820527 Msa0149230:intron 35.0%
GAAAACGTCAGTATCAAACA+CGG + chr1_4:9820542-9820561 Msa0149230:intron 35.0%
! CTTTCTCACAATTCTAGAAG+TGG + chr1_4:9820685-9820704 Msa0149230:CDS 35.0%
! GATTTGAAGTGTTATGAGTG+TGG + chr1_4:9820760-9820779 Msa0149230:CDS 35.0%
!! TTGGCACCAATGTTTTATTG+TGG + chr1_4:9820941-9820960 Msa0149230:intron 35.0%
CAACCATAAGAGAAATGACA+TGG - chr1_4:9821153-9821172 None:intergenic 35.0%
TTCTCTTATGGTTGTTAGGT+TGG + chr1_4:9821159-9821178 Msa0149230:intron 35.0%
GTATATGCAGAAATGGCATT+AGG + chr1_4:9821810-9821829 Msa0149230:intron 35.0%
TCAGTGAGAGCAATTATTGA+GGG + chr1_4:9821867-9821886 Msa0149230:three_prime_UTR 35.0%
! TTGAGGGAATAGTGAGATTT+TGG + chr1_4:9821883-9821902 Msa0149230:three_prime_UTR 35.0%
!! GTGAGATTTTGGTCATTTAG+TGG + chr1_4:9821894-9821913 Msa0149230:three_prime_UTR 35.0%
CGAAGTTTGGGAATGAATAG+GGG - chr1_4:9818115-9818134 None:intergenic 40.0%
AGCCTAGAAATCTTAAGAGG+GGG - chr1_4:9818141-9818160 None:intergenic 40.0%
CGAAGCCTAGAAATCTTAAG+AGG - chr1_4:9818144-9818163 None:intergenic 40.0%
TTCTTAGTGCCTGTTTGGAT+TGG + chr1_4:9818641-9818660 Msa0149230:intron 40.0%
!! CTGAGAGTTTTATGAGAAGC+GGG + chr1_4:9818923-9818942 Msa0149230:intron 40.0%
GATGTTGTGTTTGCAGTGTT+TGG + chr1_4:9819220-9819239 Msa0149230:intron 40.0%
! TCAATAAAAGCATAGCCAGG+TGG - chr1_4:9819258-9819277 None:intergenic 40.0%
TGAACATATCGACCGGAAAA+GGG - chr1_4:9819441-9819460 None:intergenic 40.0%
! TTTTCCGGTCGATATGTTCA+CGG + chr1_4:9819441-9819460 Msa0149230:intron 40.0%
GCTACACTTCTCTTGCATAA+CGG + chr1_4:9819654-9819673 Msa0149230:intron 40.0%
GCTACACTTCTCTTGCATAA+CGG + chr1_4:9819654-9819673 Msa0149230:intron 40.0%
TGCTACTGCAATTAACCTGT+CGG + chr1_4:9819762-9819781 Msa0149230:intron 40.0%
GGGACATATATACAGAACAC+AGG - chr1_4:9819802-9819821 None:intergenic 40.0%
TGATATGGATATGTCGACAC+CGG + chr1_4:9820128-9820147 Msa0149230:intron 40.0%
! GAATATAAACGTGTCGGTGT+CGG + chr1_4:9820177-9820196 Msa0149230:intron 40.0%
! AATATAAACGTGTCGGTGTC+GGG + chr1_4:9820178-9820197 Msa0149230:intron 40.0%
TGTCTTCAAACTGAAGGTCT+CGG - chr1_4:9820396-9820415 None:intergenic 40.0%
ACAGTATGTTTGCAGGGTTA+TGG + chr1_4:9820413-9820432 Msa0149230:intron 40.0%
GACACAGCTAGGTATTAAAC+AGG - chr1_4:9820461-9820480 None:intergenic 40.0%
TTCTGTGTAACAGGCAAGAA+TGG + chr1_4:9820650-9820669 Msa0149230:intron 40.0%
! TCTCACAATTCTAGAAGTGG+TGG + chr1_4:9820688-9820707 Msa0149230:CDS 40.0%
! GTCTTTCTTTTGTATGCACC+AGG + chr1_4:9821235-9821254 Msa0149230:intron 40.0%
! TATCTTCTGCCGCTATCTTT+TGG + chr1_4:9821588-9821607 Msa0149230:intron 40.0%
TCATAAGAAACTTGGGGTCT+TGG - chr1_4:9821614-9821633 None:intergenic 40.0%
GTCAGTGAGAGCAATTATTG+AGG + chr1_4:9821866-9821885 Msa0149230:three_prime_UTR 40.0%
CGAAGTTTGGGAATGAATAG+GGG - chr1_4:9818115-9818134 None:intergenic 40.0%
AGCCTAGAAATCTTAAGAGG+GGG - chr1_4:9818141-9818160 None:intergenic 40.0%
CGAAGCCTAGAAATCTTAAG+AGG - chr1_4:9818144-9818163 None:intergenic 40.0%
TTCTTAGTGCCTGTTTGGAT+TGG + chr1_4:9818641-9818660 Msa0149230:intron 40.0%
!! CTGAGAGTTTTATGAGAAGC+GGG + chr1_4:9818923-9818942 Msa0149230:intron 40.0%
GATGTTGTGTTTGCAGTGTT+TGG + chr1_4:9819220-9819239 Msa0149230:intron 40.0%
! TCAATAAAAGCATAGCCAGG+TGG - chr1_4:9819258-9819277 None:intergenic 40.0%
TGAACATATCGACCGGAAAA+GGG - chr1_4:9819441-9819460 None:intergenic 40.0%
! TTTTCCGGTCGATATGTTCA+CGG + chr1_4:9819441-9819460 Msa0149230:intron 40.0%
GCTACACTTCTCTTGCATAA+CGG + chr1_4:9819654-9819673 Msa0149230:intron 40.0%
GCTACACTTCTCTTGCATAA+CGG + chr1_4:9819654-9819673 Msa0149230:intron 40.0%
TGCTACTGCAATTAACCTGT+CGG + chr1_4:9819762-9819781 Msa0149230:intron 40.0%
GGGACATATATACAGAACAC+AGG - chr1_4:9819802-9819821 None:intergenic 40.0%
TGATATGGATATGTCGACAC+CGG + chr1_4:9820128-9820147 Msa0149230:intron 40.0%
! GAATATAAACGTGTCGGTGT+CGG + chr1_4:9820177-9820196 Msa0149230:intron 40.0%
! AATATAAACGTGTCGGTGTC+GGG + chr1_4:9820178-9820197 Msa0149230:intron 40.0%
TGTCTTCAAACTGAAGGTCT+CGG - chr1_4:9820396-9820415 None:intergenic 40.0%
ACAGTATGTTTGCAGGGTTA+TGG + chr1_4:9820413-9820432 Msa0149230:intron 40.0%
GACACAGCTAGGTATTAAAC+AGG - chr1_4:9820461-9820480 None:intergenic 40.0%
TTCTGTGTAACAGGCAAGAA+TGG + chr1_4:9820650-9820669 Msa0149230:intron 40.0%
! TCTCACAATTCTAGAAGTGG+TGG + chr1_4:9820688-9820707 Msa0149230:CDS 40.0%
! GTCTTTCTTTTGTATGCACC+AGG + chr1_4:9821235-9821254 Msa0149230:intron 40.0%
! TATCTTCTGCCGCTATCTTT+TGG + chr1_4:9821588-9821607 Msa0149230:intron 40.0%
TCATAAGAAACTTGGGGTCT+TGG - chr1_4:9821614-9821633 None:intergenic 40.0%
GTCAGTGAGAGCAATTATTG+AGG + chr1_4:9821866-9821885 Msa0149230:three_prime_UTR 40.0%
CTGAGAAAAACCCTAGCTAG+CGG - chr1_4:9818050-9818069 None:intergenic 45.0%
GGGTGAAAAATGAAGGTCGA+AGG - chr1_4:9818095-9818114 None:intergenic 45.0%
TCCCCCCTCTTAAGATTTCT+AGG + chr1_4:9818136-9818155 Msa0149230:intron 45.0%
GCCTAGAAATCTTAAGAGGG+GGG - chr1_4:9818140-9818159 None:intergenic 45.0%
!! TGGATTCTAGAGTCTCAGAG+AGG + chr1_4:9818309-9818328 Msa0149230:CDS 45.0%
!! GGATTCTAGAGTCTCAGAGA+GGG + chr1_4:9818310-9818329 Msa0149230:CDS 45.0%
!! CTTTAAGATAAGGGCGCCTT+TGG - chr1_4:9818854-9818873 None:intergenic 45.0%
GATGCTATACGCGATCTAGA+TGG + chr1_4:9819303-9819322 Msa0149230:CDS 45.0%
GAACATATCGACCGGAAAAG+GGG - chr1_4:9819440-9819459 None:intergenic 45.0%
GTGAACATATCGACCGGAAA+AGG - chr1_4:9819442-9819461 None:intergenic 45.0%
AAAGCCGTGAACATATCGAC+CGG - chr1_4:9819448-9819467 None:intergenic 45.0%
ACTGAGGATTTGCACTGCTT+TGG + chr1_4:9819616-9819635 Msa0149230:intron 45.0%
CTGAGGATTTGCACTGCTTT+GGG + chr1_4:9819617-9819636 Msa0149230:intron 45.0%
TGAGGATTTGCACTGCTTTG+GGG + chr1_4:9819618-9819637 Msa0149230:intron 45.0%
! CAGAGCACAATTTGCTCAGA+GGG - chr1_4:9819822-9819841 None:intergenic 45.0%
! TCAGAGCACAATTTGCTCAG+AGG - chr1_4:9819823-9819842 None:intergenic 45.0%
CACTGGACACAACACTGATA+TGG + chr1_4:9820113-9820132 Msa0149230:intron 45.0%
CGGGTAACAAAAAAGCTTGG+AGG - chr1_4:9820336-9820355 None:intergenic 45.0%
GTGTAACAGGCAAGAATGGT+TGG + chr1_4:9820654-9820673 Msa0149230:intron 45.0%
TAACAGGCAAGAATGGTTGG+AGG + chr1_4:9820657-9820676 Msa0149230:intron 45.0%
AACAGGCAAGAATGGTTGGA+GGG + chr1_4:9820658-9820677 Msa0149230:intron 45.0%
! CACAATTCTAGAAGTGGTGG+TGG + chr1_4:9820691-9820710 Msa0149230:CDS 45.0%
!! AATTCTAGAAGTGGTGGTGG+CGG + chr1_4:9820694-9820713 Msa0149230:CDS 45.0%
TGTTATGAGTGTGGTGAACC+TGG + chr1_4:9820769-9820788 Msa0149230:CDS 45.0%
TGCGACATTCACGAGCAAAA+TGG - chr1_4:9820795-9820814 None:intergenic 45.0%
TTTCGCAGGAGTCCAAGTTA+TGG + chr1_4:9820866-9820885 Msa0149230:intron 45.0%
TTCGCAGGAGTCCAAGTTAT+GGG + chr1_4:9820867-9820886 Msa0149230:intron 45.0%
TCTAACCTTCGCCCATAACT+TGG - chr1_4:9820881-9820900 None:intergenic 45.0%
GTTATGGGCGAAGGTTAGAT+TGG + chr1_4:9820882-9820901 Msa0149230:intron 45.0%
! GAGCCTTGGTGCAATTGTAT+TGG + chr1_4:9820922-9820941 Msa0149230:intron 45.0%
GTGCCAATACAATTGCACCA+AGG - chr1_4:9820928-9820947 None:intergenic 45.0%
!! AGGAGGTGCCATATGCTAAT+GGG + chr1_4:9821352-9821371 Msa0149230:CDS 45.0%
ATTAACTTCTGCTTCGGCGT+CGG - chr1_4:9821838-9821857 None:intergenic 45.0%
CTGAGAAAAACCCTAGCTAG+CGG - chr1_4:9818050-9818069 None:intergenic 45.0%
GGGTGAAAAATGAAGGTCGA+AGG - chr1_4:9818095-9818114 None:intergenic 45.0%
TCCCCCCTCTTAAGATTTCT+AGG + chr1_4:9818136-9818155 Msa0149230:intron 45.0%
GCCTAGAAATCTTAAGAGGG+GGG - chr1_4:9818140-9818159 None:intergenic 45.0%
!! TGGATTCTAGAGTCTCAGAG+AGG + chr1_4:9818309-9818328 Msa0149230:CDS 45.0%
!! GGATTCTAGAGTCTCAGAGA+GGG + chr1_4:9818310-9818329 Msa0149230:CDS 45.0%
!! CTTTAAGATAAGGGCGCCTT+TGG - chr1_4:9818854-9818873 None:intergenic 45.0%
GATGCTATACGCGATCTAGA+TGG + chr1_4:9819303-9819322 Msa0149230:CDS 45.0%
GAACATATCGACCGGAAAAG+GGG - chr1_4:9819440-9819459 None:intergenic 45.0%
GTGAACATATCGACCGGAAA+AGG - chr1_4:9819442-9819461 None:intergenic 45.0%
AAAGCCGTGAACATATCGAC+CGG - chr1_4:9819448-9819467 None:intergenic 45.0%
ACTGAGGATTTGCACTGCTT+TGG + chr1_4:9819616-9819635 Msa0149230:intron 45.0%
CTGAGGATTTGCACTGCTTT+GGG + chr1_4:9819617-9819636 Msa0149230:intron 45.0%
TGAGGATTTGCACTGCTTTG+GGG + chr1_4:9819618-9819637 Msa0149230:intron 45.0%
! CAGAGCACAATTTGCTCAGA+GGG - chr1_4:9819822-9819841 None:intergenic 45.0%
! TCAGAGCACAATTTGCTCAG+AGG - chr1_4:9819823-9819842 None:intergenic 45.0%
CACTGGACACAACACTGATA+TGG + chr1_4:9820113-9820132 Msa0149230:intron 45.0%
CGGGTAACAAAAAAGCTTGG+AGG - chr1_4:9820336-9820355 None:intergenic 45.0%
GTGTAACAGGCAAGAATGGT+TGG + chr1_4:9820654-9820673 Msa0149230:intron 45.0%
TAACAGGCAAGAATGGTTGG+AGG + chr1_4:9820657-9820676 Msa0149230:intron 45.0%
AACAGGCAAGAATGGTTGGA+GGG + chr1_4:9820658-9820677 Msa0149230:intron 45.0%
! CACAATTCTAGAAGTGGTGG+TGG + chr1_4:9820691-9820710 Msa0149230:CDS 45.0%
!! AATTCTAGAAGTGGTGGTGG+CGG + chr1_4:9820694-9820713 Msa0149230:CDS 45.0%
TGTTATGAGTGTGGTGAACC+TGG + chr1_4:9820769-9820788 Msa0149230:CDS 45.0%
TGCGACATTCACGAGCAAAA+TGG - chr1_4:9820795-9820814 None:intergenic 45.0%
TTTCGCAGGAGTCCAAGTTA+TGG + chr1_4:9820866-9820885 Msa0149230:intron 45.0%
TTCGCAGGAGTCCAAGTTAT+GGG + chr1_4:9820867-9820886 Msa0149230:intron 45.0%
TCTAACCTTCGCCCATAACT+TGG - chr1_4:9820881-9820900 None:intergenic 45.0%
GTTATGGGCGAAGGTTAGAT+TGG + chr1_4:9820882-9820901 Msa0149230:intron 45.0%
! GAGCCTTGGTGCAATTGTAT+TGG + chr1_4:9820922-9820941 Msa0149230:intron 45.0%
GTGCCAATACAATTGCACCA+AGG - chr1_4:9820928-9820947 None:intergenic 45.0%
!! AGGAGGTGCCATATGCTAAT+GGG + chr1_4:9821352-9821371 Msa0149230:CDS 45.0%
ATTAACTTCTGCTTCGGCGT+CGG - chr1_4:9821838-9821857 None:intergenic 45.0%
! CGCTAGCTAGGGTTTTTCTC+AGG + chr1_4:9818048-9818067 Msa0149230:five_prime_UTR 50.0%
AAGAGGGGGGAACGAAGTTT+GGG - chr1_4:9818127-9818146 None:intergenic 50.0%
TAAGAGGGGGGAACGAAGTT+TGG - chr1_4:9818128-9818147 None:intergenic 50.0%
AACGATGTCTCGTGTGTACG+TGG + chr1_4:9818280-9818299 Msa0149230:exon 50.0%
ACGATGTCTCGTGTGTACGT+GGG + chr1_4:9818281-9818300 Msa0149230:exon 50.0%
TCGTGTGTACGTGGGTAATC+TGG + chr1_4:9818289-9818308 Msa0149230:CDS 50.0%
! TAGGGTCTGGTGCCTTTTGA+TGG + chr1_4:9818602-9818621 Msa0149230:intron 50.0%
!!! TCTGGTGCCTTTTGATGGTG+TGG + chr1_4:9818607-9818626 Msa0149230:intron 50.0%
!! ATGAGAAGCGGGTTAGTGAG+TGG + chr1_4:9818934-9818953 Msa0149230:intron 50.0%
!! TGAGAAGCGGGTTAGTGAGT+GGG + chr1_4:9818935-9818954 Msa0149230:intron 50.0%
TAGCATCCTGTGCATCTCTG+CGG - chr1_4:9819290-9819309 None:intergenic 50.0%
TGCTACTGCAATTAACCCGC+CGG + chr1_4:9819696-9819715 Msa0149230:intron 50.0%
! ATGCAAGAGAAGTGTAGCGC+CGG - chr1_4:9819718-9819737 None:intergenic 50.0%
GTGTAAGCTGTTCGCAGACA+TGG + chr1_4:9820089-9820108 Msa0149230:intron 50.0%
!! GGTGTTAGGTTGACACAGCT+AGG - chr1_4:9820472-9820491 None:intergenic 50.0%
CATTCACGAGCAAAATGGCC+AGG - chr1_4:9820790-9820809 None:intergenic 50.0%
!! GAGGAGGTGCCATATGCTAA+TGG + chr1_4:9821351-9821370 Msa0149230:CDS 50.0%
!! TGGACAGCCCTGGTTTTTCA+AGG + chr1_4:9821432-9821451 Msa0149230:intron 50.0%
GGGTCTTGGCCAAAAGATAG+CGG - chr1_4:9821600-9821619 None:intergenic 50.0%
! CGCTAGCTAGGGTTTTTCTC+AGG + chr1_4:9818048-9818067 Msa0149230:five_prime_UTR 50.0%
AAGAGGGGGGAACGAAGTTT+GGG - chr1_4:9818127-9818146 None:intergenic 50.0%
TAAGAGGGGGGAACGAAGTT+TGG - chr1_4:9818128-9818147 None:intergenic 50.0%
AACGATGTCTCGTGTGTACG+TGG + chr1_4:9818280-9818299 Msa0149230:exon 50.0%
ACGATGTCTCGTGTGTACGT+GGG + chr1_4:9818281-9818300 Msa0149230:exon 50.0%
TCGTGTGTACGTGGGTAATC+TGG + chr1_4:9818289-9818308 Msa0149230:CDS 50.0%
! TAGGGTCTGGTGCCTTTTGA+TGG + chr1_4:9818602-9818621 Msa0149230:intron 50.0%
!!! TCTGGTGCCTTTTGATGGTG+TGG + chr1_4:9818607-9818626 Msa0149230:intron 50.0%
!! ATGAGAAGCGGGTTAGTGAG+TGG + chr1_4:9818934-9818953 Msa0149230:intron 50.0%
!! TGAGAAGCGGGTTAGTGAGT+GGG + chr1_4:9818935-9818954 Msa0149230:intron 50.0%
TAGCATCCTGTGCATCTCTG+CGG - chr1_4:9819290-9819309 None:intergenic 50.0%
TGCTACTGCAATTAACCCGC+CGG + chr1_4:9819696-9819715 Msa0149230:intron 50.0%
! ATGCAAGAGAAGTGTAGCGC+CGG - chr1_4:9819718-9819737 None:intergenic 50.0%
GTGTAAGCTGTTCGCAGACA+TGG + chr1_4:9820089-9820108 Msa0149230:intron 50.0%
!! GGTGTTAGGTTGACACAGCT+AGG - chr1_4:9820472-9820491 None:intergenic 50.0%
CATTCACGAGCAAAATGGCC+AGG - chr1_4:9820790-9820809 None:intergenic 50.0%
!! GAGGAGGTGCCATATGCTAA+TGG + chr1_4:9821351-9821370 Msa0149230:CDS 50.0%
!! TGGACAGCCCTGGTTTTTCA+AGG + chr1_4:9821432-9821451 Msa0149230:intron 50.0%
GGGTCTTGGCCAAAAGATAG+CGG - chr1_4:9821600-9821619 None:intergenic 50.0%
AGTCTCAGAGAGGGACCTTG+AGG + chr1_4:9818319-9818338 Msa0149230:CDS 55.0%
TGATGACCGCAGAGATGCAC+AGG + chr1_4:9819281-9819300 Msa0149230:CDS 55.0%
TGCAAGCAGCTCTGCAGTAG+TGG + chr1_4:9819519-9819538 Msa0149230:intron 55.0%
GAACACAGGCAGCACTCACA+TGG - chr1_4:9819788-9819807 None:intergenic 55.0%
CTGTTCGCAGACATGGACAC+TGG + chr1_4:9820096-9820115 Msa0149230:intron 55.0%
! GCACGGACACCTCTAGGAAT+AGG - chr1_4:9820204-9820223 None:intergenic 55.0%
! TCTGAAGCACGGACACCTCT+AGG - chr1_4:9820210-9820229 None:intergenic 55.0%
GCTCGTGAATGTCGCAATCG+TGG + chr1_4:9820799-9820818 Msa0149230:CDS 55.0%
CGTGAATGTCGCAATCGTGG+TGG + chr1_4:9820802-9820821 Msa0149230:CDS 55.0%
GAATGTCGCAATCGTGGTGG+TGG + chr1_4:9820805-9820824 Msa0149230:CDS 55.0%
GCGAAATCGAGGTGGAACTG+CGG - chr1_4:9820852-9820871 None:intergenic 55.0%
CAGTTCCACCTCGATTTCGC+AGG + chr1_4:9820852-9820871 Msa0149230:CDS 55.0%
CTTGGACTCCTGCGAAATCG+AGG - chr1_4:9820863-9820882 None:intergenic 55.0%
GGAGTCCAAGTTATGGGCGA+AGG + chr1_4:9820873-9820892 Msa0149230:intron 55.0%
ACCAGGAGTTACAGTCCTCG+TGG + chr1_4:9821252-9821271 Msa0149230:intron 55.0%
CCAGGAGTTACAGTCCTCGT+GGG + chr1_4:9821253-9821272 Msa0149230:intron 55.0%
TGTCGCTATTTGGACAGCCC+TGG + chr1_4:9821422-9821441 Msa0149230:intron 55.0%
AGTCTCAGAGAGGGACCTTG+AGG + chr1_4:9818319-9818338 Msa0149230:CDS 55.0%
TGATGACCGCAGAGATGCAC+AGG + chr1_4:9819281-9819300 Msa0149230:CDS 55.0%
TGCAAGCAGCTCTGCAGTAG+TGG + chr1_4:9819519-9819538 Msa0149230:intron 55.0%
GAACACAGGCAGCACTCACA+TGG - chr1_4:9819788-9819807 None:intergenic 55.0%
CTGTTCGCAGACATGGACAC+TGG + chr1_4:9820096-9820115 Msa0149230:intron 55.0%
! GCACGGACACCTCTAGGAAT+AGG - chr1_4:9820204-9820223 None:intergenic 55.0%
! TCTGAAGCACGGACACCTCT+AGG - chr1_4:9820210-9820229 None:intergenic 55.0%
GCTCGTGAATGTCGCAATCG+TGG + chr1_4:9820799-9820818 Msa0149230:CDS 55.0%
CGTGAATGTCGCAATCGTGG+TGG + chr1_4:9820802-9820821 Msa0149230:CDS 55.0%
GAATGTCGCAATCGTGGTGG+TGG + chr1_4:9820805-9820824 Msa0149230:CDS 55.0%
GCGAAATCGAGGTGGAACTG+CGG - chr1_4:9820852-9820871 None:intergenic 55.0%
CAGTTCCACCTCGATTTCGC+AGG + chr1_4:9820852-9820871 Msa0149230:CDS 55.0%
CTTGGACTCCTGCGAAATCG+AGG - chr1_4:9820863-9820882 None:intergenic 55.0%
GGAGTCCAAGTTATGGGCGA+AGG + chr1_4:9820873-9820892 Msa0149230:intron 55.0%
ACCAGGAGTTACAGTCCTCG+TGG + chr1_4:9821252-9821271 Msa0149230:intron 55.0%
CCAGGAGTTACAGTCCTCGT+GGG + chr1_4:9821253-9821272 Msa0149230:intron 55.0%
TGTCGCTATTTGGACAGCCC+TGG + chr1_4:9821422-9821441 Msa0149230:intron 55.0%
TCGTGTTCTCGCCGCTAGCT+AGG + chr1_4:9818036-9818055 Msa0149230:five_prime_UTR 60.0%
CGTGTTCTCGCCGCTAGCTA+GGG + chr1_4:9818037-9818056 Msa0149230:five_prime_UTR 60.0%
TGGGTTGCTCGAAGACCACC+TGG + chr1_4:9819240-9819259 Msa0149230:CDS 60.0%
!! AAGAGAAGTGTAGCGCCGGC+GGG - chr1_4:9819714-9819733 None:intergenic 60.0%
! CAAGAGAAGTGTAGCGCCGG+CGG - chr1_4:9819715-9819734 None:intergenic 60.0%
! GGTGTCGGGCCTATTCCTAG+AGG + chr1_4:9820192-9820211 Msa0149230:intron 60.0%
!! TCTAGAAGTGGTGGTGGCGG+CGG + chr1_4:9820697-9820716 Msa0149230:CDS 60.0%
!! TGTCGCAATCGTGGTGGTGG+TGG + chr1_4:9820808-9820827 Msa0149230:CDS 60.0%
!! AATCGTGGTGGTGGTGGTGC+AGG + chr1_4:9820814-9820833 Msa0149230:CDS 60.0%
TCGAGGTGGAACTGCGGCTA+CGG - chr1_4:9820846-9820865 None:intergenic 60.0%
GGACTCCTGCGAAATCGAGG+TGG - chr1_4:9820860-9820879 None:intergenic 60.0%
CCCACGAGGACTGTAACTCC+TGG - chr1_4:9821256-9821275 None:intergenic 60.0%
GGAGTTACAGTCCTCGTGGG+CGG + chr1_4:9821256-9821275 Msa0149230:intron 60.0%
CTGCTGTAGCTACGTCCACG+AGG - chr1_4:9821306-9821325 None:intergenic 60.0%
CTCGTGGACGTAGCTACAGC+AGG + chr1_4:9821304-9821323 Msa0149230:CDS 60.0%
AGGTCACCACCTCCTTACCG+TGG + chr1_4:9821324-9821343 Msa0149230:CDS 60.0%
GGTCACCACCTCCTTACCGT+GGG + chr1_4:9821325-9821344 Msa0149230:CDS 60.0%
TCGTGTTCTCGCCGCTAGCT+AGG + chr1_4:9818036-9818055 Msa0149230:five_prime_UTR 60.0%
CGTGTTCTCGCCGCTAGCTA+GGG + chr1_4:9818037-9818056 Msa0149230:five_prime_UTR 60.0%
TGGGTTGCTCGAAGACCACC+TGG + chr1_4:9819240-9819259 Msa0149230:CDS 60.0%
!! AAGAGAAGTGTAGCGCCGGC+GGG - chr1_4:9819714-9819733 None:intergenic 60.0%
! CAAGAGAAGTGTAGCGCCGG+CGG - chr1_4:9819715-9819734 None:intergenic 60.0%
! GGTGTCGGGCCTATTCCTAG+AGG + chr1_4:9820192-9820211 Msa0149230:intron 60.0%
!! TCTAGAAGTGGTGGTGGCGG+CGG + chr1_4:9820697-9820716 Msa0149230:CDS 60.0%
!! TGTCGCAATCGTGGTGGTGG+TGG + chr1_4:9820808-9820827 Msa0149230:CDS 60.0%
!! AATCGTGGTGGTGGTGGTGC+AGG + chr1_4:9820814-9820833 Msa0149230:CDS 60.0%
TCGAGGTGGAACTGCGGCTA+CGG - chr1_4:9820846-9820865 None:intergenic 60.0%
GGACTCCTGCGAAATCGAGG+TGG - chr1_4:9820860-9820879 None:intergenic 60.0%
CCCACGAGGACTGTAACTCC+TGG - chr1_4:9821256-9821275 None:intergenic 60.0%
GGAGTTACAGTCCTCGTGGG+CGG + chr1_4:9821256-9821275 Msa0149230:intron 60.0%
CTGCTGTAGCTACGTCCACG+AGG - chr1_4:9821306-9821325 None:intergenic 60.0%
CTCGTGGACGTAGCTACAGC+AGG + chr1_4:9821304-9821323 Msa0149230:CDS 60.0%
AGGTCACCACCTCCTTACCG+TGG + chr1_4:9821324-9821343 Msa0149230:CDS 60.0%
GGTCACCACCTCCTTACCGT+GGG + chr1_4:9821325-9821344 Msa0149230:CDS 60.0%
GCAGCACTCACATGGCCGAC+AGG - chr1_4:9819780-9819799 None:intergenic 65.0%
GTCCACGAGGTGACACGCTG+CGG - chr1_4:9821293-9821312 None:intergenic 65.0%
TCACGCCCACGGTAAGGAGG+TGG - chr1_4:9821333-9821352 None:intergenic 65.0%
ACCTCCTTACCGTGGGCGTG+AGG + chr1_4:9821332-9821351 Msa0149230:CDS 65.0%
TCCTCACGCCCACGGTAAGG+AGG - chr1_4:9821336-9821355 None:intergenic 65.0%
TCCTTACCGTGGGCGTGAGG+AGG + chr1_4:9821335-9821354 Msa0149230:CDS 65.0%
ACCTCCTCACGCCCACGGTA+AGG - chr1_4:9821339-9821358 None:intergenic 65.0%
ATGGCACCTCCTCACGCCCA+CGG - chr1_4:9821344-9821363 None:intergenic 65.0%
GCAGCACTCACATGGCCGAC+AGG - chr1_4:9819780-9819799 None:intergenic 65.0%
GTCCACGAGGTGACACGCTG+CGG - chr1_4:9821293-9821312 None:intergenic 65.0%
TCACGCCCACGGTAAGGAGG+TGG - chr1_4:9821333-9821352 None:intergenic 65.0%
ACCTCCTTACCGTGGGCGTG+AGG + chr1_4:9821332-9821351 Msa0149230:CDS 65.0%
TCCTCACGCCCACGGTAAGG+AGG - chr1_4:9821336-9821355 None:intergenic 65.0%
TCCTTACCGTGGGCGTGAGG+AGG + chr1_4:9821335-9821354 Msa0149230:CDS 65.0%
ACCTCCTCACGCCCACGGTA+AGG - chr1_4:9821339-9821358 None:intergenic 65.0%
ATGGCACCTCCTCACGCCCA+CGG - chr1_4:9821344-9821363 None:intergenic 65.0%
!! AGAAGTGGTGGTGGCGGCGG+CGG + chr1_4:9820700-9820719 Msa0149230:CDS 70.0%
!! GGTGGTGGAGGTCGTGGTCG+TGG + chr1_4:9820721-9820740 Msa0149230:CDS 70.0%
GGTGGAGGTCGTGGTCGTGG+CGG + chr1_4:9820724-9820743 Msa0149230:CDS 70.0%
!! AGAAGTGGTGGTGGCGGCGG+CGG + chr1_4:9820700-9820719 Msa0149230:CDS 70.0%
!! GGTGGTGGAGGTCGTGGTCG+TGG + chr1_4:9820721-9820740 Msa0149230:CDS 70.0%
GGTGGAGGTCGTGGTCGTGG+CGG + chr1_4:9820724-9820743 Msa0149230:CDS 70.0%
GGAGGTCGTGGTCGTGGCGG+CGG + chr1_4:9820727-9820746 Msa0149230:CDS 75.0%
TGACACGCTGCGGCGCCTGG+GGG - chr1_4:9821283-9821302 None:intergenic 75.0%
GTGACACGCTGCGGCGCCTG+GGG - chr1_4:9821284-9821303 None:intergenic 75.0%
GGTGACACGCTGCGGCGCCT+GGG - chr1_4:9821285-9821304 None:intergenic 75.0%
AGGTGACACGCTGCGGCGCC+TGG - chr1_4:9821286-9821305 None:intergenic 75.0%
CGCCGCAGCGTGTCACCTCG+TGG + chr1_4:9821288-9821307 Msa0149230:CDS 75.0%
GGAGGTCGTGGTCGTGGCGG+CGG + chr1_4:9820727-9820746 Msa0149230:CDS 75.0%
TGACACGCTGCGGCGCCTGG+GGG - chr1_4:9821283-9821302 None:intergenic 75.0%
GTGACACGCTGCGGCGCCTG+GGG - chr1_4:9821284-9821303 None:intergenic 75.0%
GGTGACACGCTGCGGCGCCT+GGG - chr1_4:9821285-9821304 None:intergenic 75.0%
AGGTGACACGCTGCGGCGCC+TGG - chr1_4:9821286-9821305 None:intergenic 75.0%
CGCCGCAGCGTGTCACCTCG+TGG + chr1_4:9821288-9821307 Msa0149230:CDS 75.0%
!!! AGTGGTGGTGGCGGCGGCGG+TGG + chr1_4:9820703-9820722 Msa0149230:CDS 80.0%
!!! GGCGGCGGTGGTGGAGGTCG+TGG + chr1_4:9820715-9820734 Msa0149230:CDS 80.0%
! GGTCGTGGTCGTGGCGGCGG+CGG + chr1_4:9820730-9820749 Msa0149230:CDS 80.0%
! GTCCTCGTGGGCGGTCCCCC+AGG + chr1_4:9821265-9821284 Msa0149230:CDS 80.0%
!!! AGTGGTGGTGGCGGCGGCGG+TGG + chr1_4:9820703-9820722 Msa0149230:CDS 80.0%
!!! GGCGGCGGTGGTGGAGGTCG+TGG + chr1_4:9820715-9820734 Msa0149230:CDS 80.0%
! GGTCGTGGTCGTGGCGGCGG+CGG + chr1_4:9820730-9820749 Msa0149230:CDS 80.0%
! GTCCTCGTGGGCGGTCCCCC+AGG + chr1_4:9821265-9821284 Msa0149230:CDS 80.0%
!!! GGTGGTGGCGGCGGCGGTGG+TGG + chr1_4:9820706-9820725 Msa0149230:CDS 85.0%
!! GGTGGCGGCGGCGGTGGTGG+AGG + chr1_4:9820709-9820728 Msa0149230:CDS 85.0%
! CGTGGTCGTGGCGGCGGCGG+CGG + chr1_4:9820733-9820752 Msa0149230:CDS 85.0%
! CGCCTGGGGGACCGCCCACG+AGG - chr1_4:9821270-9821289 None:intergenic 85.0%
!!! GGTGGTGGCGGCGGCGGTGG+TGG + chr1_4:9820706-9820725 Msa0149230:CDS 85.0%
!! GGTGGCGGCGGCGGTGGTGG+AGG + chr1_4:9820709-9820728 Msa0149230:CDS 85.0%
! CGTGGTCGTGGCGGCGGCGG+CGG + chr1_4:9820733-9820752 Msa0149230:CDS 85.0%
! CGCCTGGGGGACCGCCCACG+AGG - chr1_4:9821270-9821289 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 9817986 9822081 9817986 ID=Msa0149230;Name=Msa0149230
chr1_4 mRNA 9817986 9822081 9817986 ID=Msa0149230-mRNA-1;Parent=Msa0149230;Name=Msa0149230-mRNA-1;_AED=0.31;_eAED=0.31;_QI=107|0.6|0.66|1|0.4|0.33|6|225|184
chr1_4 exon 9817986 9818069 9817986 ID=Msa0149230-mRNA-1:exon:4190;Parent=Msa0149230-mRNA-1
chr1_4 exon 9818261 9818372 9818261 ID=Msa0149230-mRNA-1:exon:4191;Parent=Msa0149230-mRNA-1
chr1_4 exon 9819236 9819328 9819236 ID=Msa0149230-mRNA-1:exon:4192;Parent=Msa0149230-mRNA-1
chr1_4 exon 9820663 9820881 9820663 ID=Msa0149230-mRNA-1:exon:4193;Parent=Msa0149230-mRNA-1
chr1_4 exon 9821257 9821373 9821257 ID=Msa0149230-mRNA-1:exon:4194;Parent=Msa0149230-mRNA-1
chr1_4 exon 9821820 9822081 9821820 ID=Msa0149230-mRNA-1:exon:4195;Parent=Msa0149230-mRNA-1
chr1_4 five_prime_UTR 9817986 9818069 9817986 ID=Msa0149230-mRNA-1:five_prime_utr;Parent=Msa0149230-mRNA-1
chr1_4 five_prime_UTR 9818261 9818283 9818261 ID=Msa0149230-mRNA-1:five_prime_utr;Parent=Msa0149230-mRNA-1
chr1_4 CDS 9818284 9818372 9818284 ID=Msa0149230-mRNA-1:cds;Parent=Msa0149230-mRNA-1
chr1_4 CDS 9819236 9819328 9819236 ID=Msa0149230-mRNA-1:cds;Parent=Msa0149230-mRNA-1
chr1_4 CDS 9820663 9820881 9820663 ID=Msa0149230-mRNA-1:cds;Parent=Msa0149230-mRNA-1
chr1_4 CDS 9821257 9821373 9821257 ID=Msa0149230-mRNA-1:cds;Parent=Msa0149230-mRNA-1
chr1_4 CDS 9821820 9821856 9821820 ID=Msa0149230-mRNA-1:cds;Parent=Msa0149230-mRNA-1
chr1_4 three_prime_UTR 9821857 9822081 9821857 ID=Msa0149230-mRNA-1:three_prime_utr;Parent=Msa0149230-mRNA-1
Gene Sequence

>Msa0149230

ATGTCTCGTGTGTACGTGGGTAATCTGGATTCTAGAGTCTCAGAGAGGGACCTTGAGGATGAATTTCGTGTTTTTGGTGTAATTCGAAGTGTTTGGGTTGCTCGAAGACCACCTGGCTATGCTTTTATTGACTTTGATGACCGCAGAGATGCACAGGATGCTATACGCGATCTAGATGGTATGCAAGAATGGTTGGAGGGTAAGCTTTCTCACAATTCTAGAAGTGGTGGTGGCGGCGGCGGTGGTGGAGGTCGTGGTCGTGGCGGCGGCGGCGGTTCTGATTTGAAGTGTTATGAGTGTGGTGAACCTGGCCATTTTGCTCGTGAATGTCGCAATCGTGGTGGTGGTGGTGCAGGAAGACGCCGTAGCCGCAGTTCCACCTCGATTTCGCAGGAGTCCAAGAGTTACAGTCCTCGTGGGCGGTCCCCCAGGCGCCGCAGCGTGTCACCTCGTGGACGTAGCTACAGCAGGTCACCACCTCCTTACCGTGGGCGTGAGGAGGTGCCATATGCTAATGGAAATGGCATTAGGGACCGACGCCGAAGCAGAAGTTAA
Protein sequence

>Msa0149230

MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDLDGMQEWLEGKLSHNSRSGGGGGGGGGRGRGGGGGSDLKCYECGEPGHFARECRNRGGGGAGRRRSRSSTSISQESKSYSPRGRSPRRRSVSPRGRSYSRSPPPYRGREEVPYANGNGIRDRRRSRS*