Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0858770 | 0.834491 | 2.906786e-56 | -8.615850e-47 |
| Msa0002750 | Msa0858770 | 0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa0014990 | Msa0858770 | 0.811395 | 7.154628e-51 | -8.615850e-47 |
| Msa0017770 | Msa0858770 | -0.820084 | 8.267579e-53 | -8.615850e-47 |
| Msa0026130 | Msa0858770 | 0.834217 | 3.406123e-56 | -8.615850e-47 |
| Msa0027260 | Msa0858770 | 0.862582 | 4.576525e-64 | -8.615850e-47 |
| Msa0028420 | Msa0858770 | 0.806554 | 7.776266e-50 | -8.615850e-47 |
| Msa0032260 | Msa0858770 | 0.829552 | 4.828984e-55 | -8.615850e-47 |
| Msa0046740 | Msa0858770 | 0.802453 | 5.570521e-49 | -8.615850e-47 |
| Msa0048180 | Msa0858770 | 0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0049370 | Msa0858770 | 0.800435 | 1.443054e-48 | -8.615850e-47 |
| Msa0055190 | Msa0858770 | 0.814175 | 1.761482e-51 | -8.615850e-47 |
| Msa0056430 | Msa0858770 | 0.823685 | 1.212628e-53 | -8.615850e-47 |
| Msa0056470 | Msa0858770 | 0.869040 | 4.168624e-66 | -8.615850e-47 |
| Msa0064350 | Msa0858770 | 0.825715 | 4.029729e-54 | -8.615850e-47 |
| Msa0064380 | Msa0858770 | 0.813074 | 3.076859e-51 | -8.615850e-47 |
| Msa0069330 | Msa0858770 | 0.811245 | 7.710612e-51 | -8.615850e-47 |
| Msa0072370 | Msa0858770 | 0.807190 | 5.704752e-50 | -8.615850e-47 |
| Msa0074030 | Msa0858770 | 0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa0076040 | Msa0858770 | 0.842498 | 2.492164e-58 | -8.615850e-47 |
| Msa0082280 | Msa0858770 | 0.837084 | 6.402655e-57 | -8.615850e-47 |
| Msa0083070 | Msa0858770 | 0.808531 | 2.958552e-50 | -8.615850e-47 |
| Msa0086750 | Msa0858770 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0094470 | Msa0858770 | 0.829313 | 5.521202e-55 | -8.615850e-47 |
| Msa0100740 | Msa0858770 | 0.807345 | 5.290326e-50 | -8.615850e-47 |
| Msa0104550 | Msa0858770 | 0.805529 | 1.277795e-49 | -8.615850e-47 |
| Msa0112790 | Msa0858770 | 0.818150 | 2.277784e-52 | -8.615850e-47 |
| Msa0114870 | Msa0858770 | 0.814884 | 1.227405e-51 | -8.615850e-47 |
| Msa0115990 | Msa0858770 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
| Msa0607050 | Msa0858770 | 0.803974 | 2.698467e-49 | -8.615850e-47 |
| Msa0608320 | Msa0858770 | 0.808005 | 3.830922e-50 | -8.615850e-47 |
| Msa0615990 | Msa0858770 | 0.806612 | 7.560228e-50 | -8.615850e-47 |
| Msa0621950 | Msa0858770 | 0.823566 | 1.292521e-53 | -8.615850e-47 |
| Msa0622960 | Msa0858770 | 0.812651 | 3.807572e-51 | -8.615850e-47 |
| Msa0647500 | Msa0858770 | 0.818035 | 2.418034e-52 | -8.615850e-47 |
| Msa0650920 | Msa0858770 | 0.805798 | 1.121701e-49 | -8.615850e-47 |
| Msa0651050 | Msa0858770 | 0.820366 | 7.124228e-53 | -8.615850e-47 |
| Msa0661300 | Msa0858770 | 0.851313 | 9.629933e-61 | -8.615850e-47 |
| Msa0662500 | Msa0858770 | 0.831000 | 2.139245e-55 | -8.615850e-47 |
| Msa0685460 | Msa0858770 | 0.826716 | 2.328228e-54 | -8.615850e-47 |
| Msa0687630 | Msa0858770 | 0.825679 | 4.110910e-54 | -8.615850e-47 |
| Msa0689230 | Msa0858770 | 0.841462 | 4.682127e-58 | -8.615850e-47 |
| Msa0690150 | Msa0858770 | 0.846346 | 2.301555e-59 | -8.615850e-47 |
| Msa0692840 | Msa0858770 | 0.877465 | 6.149840e-69 | -8.615850e-47 |
| Msa0692940 | Msa0858770 | 0.841415 | 4.817075e-58 | -8.615850e-47 |
| Msa0709500 | Msa0858770 | 0.825260 | 5.165238e-54 | -8.615850e-47 |
| Msa0719510 | Msa0858770 | 0.823666 | 1.225041e-53 | -8.615850e-47 |
| Msa0720820 | Msa0858770 | 0.802950 | 4.398605e-49 | -8.615850e-47 |
| Msa0722020 | Msa0858770 | 0.804172 | 2.454432e-49 | -8.615850e-47 |
| Msa0746420 | Msa0858770 | 0.810151 | 1.329399e-50 | -8.615850e-47 |
| Msa0749760 | Msa0858770 | 0.842575 | 2.377593e-58 | -8.615850e-47 |
| Msa0750880 | Msa0858770 | 0.851055 | 1.138227e-60 | -8.615850e-47 |
| Msa0755340 | Msa0858770 | 0.809032 | 2.312012e-50 | -8.615850e-47 |
| Msa0756260 | Msa0858770 | 0.836727 | 7.900817e-57 | -8.615850e-47 |
| Msa0761940 | Msa0858770 | 0.820276 | 7.471382e-53 | -8.615850e-47 |
| Msa0763020 | Msa0858770 | 0.826348 | 2.849701e-54 | -8.615850e-47 |
| Msa0763070 | Msa0858770 | 0.835099 | 2.043620e-56 | -8.615850e-47 |
| Msa0784200 | Msa0858770 | 0.995492 | 8.221200e-217 | -8.615850e-47 |
| Msa0790850 | Msa0858770 | 0.820694 | 5.989721e-53 | -8.615850e-47 |
| Msa0818310 | Msa0858770 | 0.987830 | 1.074991e-171 | -8.615850e-47 |
| Msa0830090 | Msa0858770 | 0.832001 | 1.212485e-55 | -8.615850e-47 |
| Msa0841940 | Msa0858770 | 0.812914 | 3.335020e-51 | -8.615850e-47 |
| Msa0122970 | Msa0858770 | 0.802717 | 4.913638e-49 | -8.615850e-47 |
| Msa0125450 | Msa0858770 | 0.810632 | 1.046709e-50 | -8.615850e-47 |
| Msa0125540 | Msa0858770 | 0.830461 | 2.899382e-55 | -8.615850e-47 |
| Msa0127310 | Msa0858770 | 0.820509 | 6.605254e-53 | -8.615850e-47 |
| Msa0128860 | Msa0858770 | 0.847649 | 1.011539e-59 | -8.615850e-47 |
| Msa0129060 | Msa0858770 | 0.801750 | 7.770083e-49 | -8.615850e-47 |
| Msa0140820 | Msa0858770 | 0.873110 | 1.895426e-67 | -8.615850e-47 |
| Msa0140850 | Msa0858770 | 0.854381 | 1.278135e-61 | -8.615850e-47 |
| Msa0148060 | Msa0858770 | 0.844331 | 8.078364e-59 | -8.615850e-47 |
| Msa0149190 | Msa0858770 | 0.816337 | 5.824878e-52 | -8.615850e-47 |
| Msa0149200 | Msa0858770 | 0.852854 | 3.512583e-61 | -8.615850e-47 |
| Msa0149230 | Msa0858770 | 0.802071 | 6.674968e-49 | -8.615850e-47 |
| Msa0151370 | Msa0858770 | 0.819496 | 1.126818e-52 | -8.615850e-47 |
| Msa0166590 | Msa0858770 | 0.839298 | 1.723144e-57 | -8.615850e-47 |
| Msa0174730 | Msa0858770 | 0.848581 | 5.596777e-60 | -8.615850e-47 |
| Msa0174770 | Msa0858770 | 0.811151 | 8.081534e-51 | -8.615850e-47 |
| Msa0181610 | Msa0858770 | 0.832682 | 8.222648e-56 | -8.615850e-47 |
| Msa0182620 | Msa0858770 | -0.803717 | 3.050512e-49 | -8.615850e-47 |
| Msa0186890 | Msa0858770 | 0.802344 | 5.864997e-49 | -8.615850e-47 |
| Msa0187930 | Msa0858770 | 0.834825 | 2.396153e-56 | -8.615850e-47 |
| Msa0189290 | Msa0858770 | 0.800974 | 1.120357e-48 | -8.615850e-47 |
| Msa0189700 | Msa0858770 | 0.850141 | 2.057052e-60 | -8.615850e-47 |
| Msa0194540 | Msa0858770 | 0.832769 | 7.824437e-56 | -8.615850e-47 |
| Msa0197930 | Msa0858770 | 0.816187 | 6.293531e-52 | -8.615850e-47 |
| Msa0199690 | Msa0858770 | 0.810671 | 1.026433e-50 | -8.615850e-47 |
| Msa0199880 | Msa0858770 | 0.851725 | 7.359258e-61 | -8.615850e-47 |
| Msa0223080 | Msa0858770 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0229230 | Msa0858770 | 0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0229760 | Msa0858770 | 0.878722 | 2.231459e-69 | -8.615850e-47 |
| Msa0231650 | Msa0858770 | 0.807145 | 5.830359e-50 | -8.615850e-47 |
| Msa0231980 | Msa0858770 | 0.803595 | 3.233853e-49 | -8.615850e-47 |
| Msa0232010 | Msa0858770 | 0.866232 | 3.314620e-65 | -8.615850e-47 |
| Msa0232080 | Msa0858770 | 0.866727 | 2.308006e-65 | -8.615850e-47 |
| Msa0366890 | Msa0858770 | 0.839885 | 1.212170e-57 | -8.615850e-47 |
| Msa0369450 | Msa0858770 | 0.909753 | 4.019361e-82 | -8.615850e-47 |
| Msa0376300 | Msa0858770 | 0.805574 | 1.250113e-49 | -8.615850e-47 |
| Msa0376310 | Msa0858770 | 0.815667 | 8.219970e-52 | -8.615850e-47 |
| Msa0380300 | Msa0858770 | 0.853382 | 2.480356e-61 | -8.615850e-47 |
| Msa0385580 | Msa0858770 | 0.821750 | 3.420374e-53 | -8.615850e-47 |
| Msa0387730 | Msa0858770 | 0.867108 | 1.744248e-65 | -8.615850e-47 |
| Msa0390030 | Msa0858770 | 0.830948 | 2.202458e-55 | -8.615850e-47 |
| Msa0395820 | Msa0858770 | 0.844138 | 9.098896e-59 | -8.615850e-47 |
| Msa0402650 | Msa0858770 | 0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa0414800 | Msa0858770 | 0.810891 | 9.198208e-51 | -8.615850e-47 |
| Msa0427150 | Msa0858770 | 0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0432210 | Msa0858770 | 0.847123 | 1.410778e-59 | -8.615850e-47 |
| Msa0438690 | Msa0858770 | 0.839127 | 1.908007e-57 | -8.615850e-47 |
| Msa0439200 | Msa0858770 | 0.816463 | 5.458335e-52 | -8.615850e-47 |
| Msa0468330 | Msa0858770 | 0.838632 | 2.562394e-57 | -8.615850e-47 |
| Msa0471440 | Msa0858770 | 0.818946 | 1.502872e-52 | -8.615850e-47 |
| Msa0482650 | Msa0858770 | 0.841878 | 3.638209e-58 | -8.615850e-47 |
| Msa0239190 | Msa0858770 | 0.800566 | 1.357394e-48 | -8.615850e-47 |
| Msa0239570 | Msa0858770 | 0.807820 | 4.193020e-50 | -8.615850e-47 |
| Msa0242230 | Msa0858770 | 0.818480 | 1.917932e-52 | -8.615850e-47 |
| Msa0242410 | Msa0858770 | 0.824072 | 9.841223e-54 | -8.615850e-47 |
| Msa0244780 | Msa0858770 | 0.833875 | 4.147822e-56 | -8.615850e-47 |
| Msa0255090 | Msa0858770 | 0.811635 | 6.344350e-51 | -8.615850e-47 |
| Msa0259380 | Msa0858770 | 0.805987 | 1.023426e-49 | -8.615850e-47 |
| Msa0267970 | Msa0858770 | 0.808258 | 3.383670e-50 | -8.615850e-47 |
| Msa0268130 | Msa0858770 | 0.843413 | 1.422576e-58 | -8.615850e-47 |
| Msa0270320 | Msa0858770 | 0.805552 | 1.263607e-49 | -8.615850e-47 |
| Msa0273900 | Msa0858770 | 0.826446 | 2.701523e-54 | -8.615850e-47 |
| Msa0280610 | Msa0858770 | 0.898622 | 4.430255e-77 | -8.615850e-47 |
| Msa0298990 | Msa0858770 | 0.845004 | 5.320770e-59 | -8.615850e-47 |
| Msa0300090 | Msa0858770 | 0.832655 | 8.350093e-56 | -8.615850e-47 |
| Msa0300120 | Msa0858770 | 0.838244 | 3.226346e-57 | -8.615850e-47 |
| Msa0302160 | Msa0858770 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa0310030 | Msa0858770 | 0.809081 | 2.256342e-50 | -8.615850e-47 |
| Msa0315170 | Msa0858770 | 0.852945 | 3.309039e-61 | -8.615850e-47 |
| Msa0317280 | Msa0858770 | 0.831443 | 1.664097e-55 | -8.615850e-47 |
| Msa0317340 | Msa0858770 | 0.837841 | 4.097796e-57 | -8.615850e-47 |
| Msa0336010 | Msa0858770 | 0.802052 | 6.734937e-49 | -8.615850e-47 |
| Msa0339490 | Msa0858770 | 0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa0497490 | Msa0858770 | 0.825054 | 5.778693e-54 | -8.615850e-47 |
| Msa0518390 | Msa0858770 | 0.896270 | 4.334190e-76 | -8.615850e-47 |
| Msa0518450 | Msa0858770 | 0.894144 | 3.250294e-75 | -8.615850e-47 |
| Msa0521050 | Msa0858770 | 0.888369 | 6.276574e-73 | -8.615850e-47 |
| Msa0523270 | Msa0858770 | 0.808488 | 3.022116e-50 | -8.615850e-47 |
| Msa0524500 | Msa0858770 | 0.848035 | 7.919503e-60 | -8.615850e-47 |
| Msa0526540 | Msa0858770 | 0.814773 | 1.298838e-51 | -8.615850e-47 |
| Msa0527550 | Msa0858770 | 0.846826 | 1.701513e-59 | -8.615850e-47 |
| Msa0529680 | Msa0858770 | 0.804939 | 1.697719e-49 | -8.615850e-47 |
| Msa0541860 | Msa0858770 | 0.805101 | 1.570297e-49 | -8.615850e-47 |
| Msa0552810 | Msa0858770 | 0.866272 | 3.219369e-65 | -8.615850e-47 |
| Msa0556060 | Msa0858770 | 0.815779 | 7.760477e-52 | -8.615850e-47 |
| Msa0566700 | Msa0858770 | 0.842285 | 2.839172e-58 | -8.615850e-47 |
| Msa0571920 | Msa0858770 | 0.806686 | 7.292135e-50 | -8.615850e-47 |
| Msa0575170 | Msa0858770 | 0.839514 | 1.513701e-57 | -8.615850e-47 |
| Msa0576940 | Msa0858770 | 0.805017 | 1.635164e-49 | -8.615850e-47 |
| Msa0581070 | Msa0858770 | 0.853531 | 2.246943e-61 | -8.615850e-47 |
| Msa0581110 | Msa0858770 | 0.823270 | 1.515733e-53 | -8.615850e-47 |
| Msa0585960 | Msa0858770 | 0.800694 | 1.277858e-48 | -8.615850e-47 |
| Msa0588360 | Msa0858770 | 0.842759 | 2.124706e-58 | -8.615850e-47 |
| Msa0858770 | Msa0881290 | 0.849928 | 2.359544e-60 | -8.615850e-47 |
| Msa0858770 | Msa0902760 | 0.879842 | 8.952576e-70 | -8.615850e-47 |
| Msa0858770 | Msa0931460 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0858770 | Msa0936340 | 0.808402 | 3.151710e-50 | -8.615850e-47 |
| Msa0858770 | Msa0953310 | 0.839902 | 1.200322e-57 | -8.615850e-47 |
| Msa0858770 | Msa0968590 | 0.862532 | 4.742878e-64 | -8.615850e-47 |
| Msa0858770 | Msa0970030 | 0.814075 | 1.852749e-51 | -8.615850e-47 |
| Msa0858770 | Msa1006840 | 0.838121 | 3.471317e-57 | -8.615850e-47 |
| Msa0858770 | Msa1012320 | 0.818637 | 1.766731e-52 | -8.615850e-47 |
| Msa0858770 | Msa1012370 | 0.806639 | 7.459236e-50 | -8.615850e-47 |
| Msa0858770 | Msa1013400 | 0.888762 | 4.428114e-73 | -8.615850e-47 |
| Msa0858770 | Msa1019240 | 0.815826 | 7.577008e-52 | -8.615850e-47 |
| Msa0858770 | Msa1019260 | 0.846210 | 2.505702e-59 | -8.615850e-47 |
| Msa0858770 | Msa1040400 | 0.816468 | 5.445952e-52 | -8.615850e-47 |
| Msa0858770 | Msa1050210 | 0.815404 | 9.404567e-52 | -8.615850e-47 |
| Msa0858770 | Msa1066490 | 0.810474 | 1.132382e-50 | -8.615850e-47 |
| Msa0858770 | Msa1078170 | 0.806420 | 8.297118e-50 | -8.615850e-47 |
| Msa0858770 | Msa1078270 | 0.855287 | 6.980250e-62 | -8.615850e-47 |
| Msa0858770 | Msa1081150 | 0.871098 | 8.849780e-67 | -8.615850e-47 |
| Msa0858770 | Msa1081930 | 0.829526 | 4.899676e-55 | -8.615850e-47 |
| Msa0858770 | Msa1081990 | 0.854143 | 1.497587e-61 | -8.615850e-47 |
| Msa0858770 | Msa1083150 | 0.808272 | 3.360085e-50 | -8.615850e-47 |
| Msa0858770 | Msa1091530 | 0.827486 | 1.523467e-54 | -8.615850e-47 |
| Msa0858770 | Msa1093530 | 0.879531 | 1.154677e-69 | -8.615850e-47 |
| Msa0858770 | Msa1093840 | 0.826546 | 2.556176e-54 | -8.615850e-47 |
| Msa0858770 | Msa1101600 | 0.869168 | 3.790690e-66 | -8.615850e-47 |
| Msa0858770 | Msa1104140 | 0.838133 | 3.445501e-57 | -8.615850e-47 |
| Msa0858770 | Msa1104210 | 0.815356 | 9.640789e-52 | -8.615850e-47 |
| Msa0858770 | Msa1119200 | 0.823307 | 1.486250e-53 | -8.615850e-47 |
| Msa0858770 | Msa1123500 | 0.819987 | 8.701064e-53 | -8.615850e-47 |
| Msa0858770 | Msa1125760 | 0.812009 | 5.258142e-51 | -8.615850e-47 |
| Msa0858770 | Msa1126510 | 0.912716 | 1.415475e-83 | -8.615850e-47 |
| Msa0858770 | Msa1126770 | 0.871027 | 9.338046e-67 | -8.615850e-47 |
| Msa0858770 | Msa1126830 | 0.817445 | 3.284795e-52 | -8.615850e-47 |
| Msa0858770 | Msa1127890 | 0.823118 | 1.644836e-53 | -8.615850e-47 |
| Msa0858770 | Msa1128600 | 0.812138 | 4.929166e-51 | -8.615850e-47 |
| Msa0858770 | Msa1130980 | 0.830084 | 3.584122e-55 | -8.615850e-47 |
| Msa0858770 | Msa1134110 | 0.815381 | 9.517235e-52 | -8.615850e-47 |
| Msa0858770 | Msa1158570 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa0858770 | Msa1165870 | 0.833314 | 5.727762e-56 | -8.615850e-47 |
| Msa0858770 | Msa1165940 | 0.898562 | 4.698058e-77 | -8.615850e-47 |
| Msa0858770 | Msa1166330 | 0.832398 | 9.672359e-56 | -8.615850e-47 |
| Msa0858770 | Msa1166340 | 0.817202 | 3.725757e-52 | -8.615850e-47 |
| Msa0858770 | Msa1166860 | 0.895341 | 1.051143e-75 | -8.615850e-47 |
| Msa0858770 | Msa1169770 | 0.855065 | 8.097099e-62 | -8.615850e-47 |
| Msa0858770 | Msa1171360 | 0.822046 | 2.921104e-53 | -8.615850e-47 |
| Msa0858770 | Msa1184370 | 0.800869 | 1.177239e-48 | -8.615850e-47 |
| Msa0858770 | Msa1187840 | 0.806179 | 9.325994e-50 | -8.615850e-47 |
| Msa0858770 | Msa1204250 | 0.800107 | 1.683185e-48 | -8.615850e-47 |
| Msa0858770 | Msa1207270 | 0.865742 | 4.735299e-65 | -8.615850e-47 |
| Msa0858770 | Msa1210810 | 0.813553 | 2.415393e-51 | -8.615850e-47 |
| Msa0858770 | Msa1218600 | 0.898177 | 6.851230e-77 | -8.615850e-47 |
| Msa0858770 | Msa1229320 | 0.860550 | 1.909786e-63 | -8.615850e-47 |
| Msa0858770 | Msa1239410 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
| Msa0858770 | Msa1239910 | 0.814316 | 1.639536e-51 | -8.615850e-47 |
| Msa0858770 | Msa1251160 | 0.876889 | 9.751202e-69 | -8.615850e-47 |
| Msa0858770 | Msa1254700 | 0.805018 | 1.634145e-49 | -8.615850e-47 |
| Msa0858770 | Msa1255040 | -0.808462 | 3.061085e-50 | -8.615850e-47 |
| Msa0858770 | Msa1257510 | 0.882678 | 8.518923e-71 | -8.615850e-47 |
| Msa0858770 | Msa1267430 | 0.810472 | 1.133399e-50 | -8.615850e-47 |
| Msa0858770 | Msa1283170 | 0.837834 | 4.114101e-57 | -8.615850e-47 |
| Msa0858770 | Msa1292830 | 0.812522 | 4.063313e-51 | -8.615850e-47 |
| Msa0858770 | Msa1305710 | 0.813465 | 2.524665e-51 | -8.615850e-47 |
| Msa0858770 | Msa1307950 | 0.835986 | 1.219064e-56 | -8.615850e-47 |
| Msa0858770 | Msa1321630 | 0.848690 | 5.217963e-60 | -8.615850e-47 |
| Msa0858770 | Msa1333110 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0858770 | Msa1338190 | 0.818045 | 2.405668e-52 | -8.615850e-47 |
| Msa0858770 | Msa1343260 | 0.856484 | 3.119430e-62 | -8.615850e-47 |
| Msa0858770 | Msa1353060 | 0.843041 | 1.787501e-58 | -8.615850e-47 |
| Msa0858770 | Msa1356440 | 0.811430 | 7.029956e-51 | -8.615850e-47 |
| Msa0858770 | Msa1358220 | 0.828940 | 6.797277e-55 | -8.615850e-47 |
| Msa0858770 | Msa1361100 | 0.831760 | 1.390143e-55 | -8.615850e-47 |
| Msa0858770 | Msa1363330 | 0.819668 | 1.028967e-52 | -8.615850e-47 |
| Msa0858770 | Msa1366800 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa0858770 | Msa1367590 | 0.838441 | 2.871189e-57 | -8.615850e-47 |
| Msa0858770 | Msa1367880 | 0.813272 | 2.783310e-51 | -8.615850e-47 |
| Msa0858770 | Msa1370860 | 0.819133 | 1.362762e-52 | -8.615850e-47 |
| Msa0858770 | Msa1374120 | 0.814283 | 1.667079e-51 | -8.615850e-47 |
| Msa0858770 | Msa1376650 | 0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa0858770 | Msa1379760 | 0.843368 | 1.463127e-58 | -8.615850e-47 |
| Msa0858770 | Msa1382620 | 0.808880 | 2.491942e-50 | -8.615850e-47 |
| Msa0858770 | Msa1382780 | 0.832762 | 7.857108e-56 | -8.615850e-47 |
| Msa0858770 | Msa1386600 | 0.819457 | 1.149961e-52 | -8.615850e-47 |
| Msa0858770 | Msa1394290 | 0.820450 | 6.815194e-53 | -8.615850e-47 |
| Msa0858770 | Msa1404190 | 0.811802 | 5.835003e-51 | -8.615850e-47 |
| Msa0858770 | Msa1407460 | 0.833766 | 4.415454e-56 | -8.615850e-47 |
| Msa0858770 | Msa1418340 | 0.832001 | 1.212485e-55 | -8.615850e-47 |
| Msa0858770 | Msa1430240 | 0.840951 | 6.379012e-58 | -8.615850e-47 |
| Msa0858770 | Msa1432700 | 0.817685 | 2.900841e-52 | -8.615850e-47 |
| Msa0858770 | Msa1443780 | 0.823580 | 1.282910e-53 | -8.615850e-47 |
| Msa0858770 | Msa1446820 | 0.801962 | 7.030277e-49 | -8.615850e-47 |
| Msa0858770 | Msa1448690 | 0.843803 | 1.119510e-58 | -8.615850e-47 |
| Msa0858770 | Msa1450280 | 0.836363 | 9.779935e-57 | -8.615850e-47 |
| Msa0858770 | Msa1451160 | 0.814316 | 1.639404e-51 | -8.615850e-47 |
| Msa0858770 | Msa1456050 | 0.817962 | 2.512013e-52 | -8.615850e-47 |
| Msa0858770 | Msa1457910 | 0.806410 | 8.338873e-50 | -8.615850e-47 |
| Msa0858770 | Msa1465080 | 0.807701 | 4.444700e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCAACAAAATTATTAAT+AGG | 0.224730 | 5_4:-56550367 | None:intergenic |
| ACAAGGTTGCAACGATTTAT+AGG | 0.244797 | 5_4:-56550029 | None:intergenic |
| CGATGCAGTCTAGCAGAAAT+TGG | 0.245631 | 5_4:+56550572 | Msa0858770:three_prime_UTR |
| CATCTTAATCTCATTAGTTT+TGG | 0.281168 | 5_4:+56550421 | Msa0858770:three_prime_UTR |
| CCTTAGAATCTCGTTATATT+CGG | 0.330694 | 5_4:+56550473 | Msa0858770:three_prime_UTR |
| TAGATCTCTGTCTCATCTTT+CGG | 0.343914 | 5_4:-56550270 | None:intergenic |
| CAAGGTTGCAACGATTTATA+GGG | 0.368412 | 5_4:-56550028 | None:intergenic |
| CCGAATATAACGAGATTCTA+AGG | 0.379000 | 5_4:-56550473 | None:intergenic |
| TTTGTCGTAAACCTAGTTGA+TGG | 0.405515 | 5_4:-56550071 | None:intergenic |
| GAGATCTAAGTAGTGAGCTT+TGG | 0.432068 | 5_4:+56550285 | Msa0858770:exon |
| AGTGGAAGAAGAAGCGTATG+AGG | 0.483173 | 5_4:+56550230 | Msa0858770:intron |
| TCTTTCAGCGGCCATCAACT+AGG | 0.508309 | 5_4:+56550060 | Msa0858770:CDS |
| GATGCAGTCTAGCAGAAATT+GGG | 0.521054 | 5_4:+56550573 | Msa0858770:three_prime_UTR |
| ACCTTGGCTCTCATCTTGAA+CGG | 0.524585 | 5_4:-56550102 | None:intergenic |
| AGCGTATGAGGAGATTGAAG+AGG | 0.544618 | 5_4:+56550242 | Msa0858770:CDS |
| ACCGTTCAAGATGAGAGCCA+AGG | 0.659345 | 5_4:+56550101 | Msa0858770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTGATTTTATCTTAATTT+TGG | + | chr5_4:56550174-56550193 | Msa0858770:intron | 15.0% |
| !!! | AATCCTATTAATAATTTTGT+TGG | + | chr5_4:56550364-56550383 | Msa0858770:three_prime_UTR | 15.0% |
| !! | TATCCAACAAAATTATTAAT+AGG | - | chr5_4:56550370-56550389 | None:intergenic | 15.0% |
| !!! | AACTACTTTGATAATTTTTT+TGG | + | chr5_4:56550513-56550532 | Msa0858770:three_prime_UTR | 15.0% |
| !!! | ACTACTTTGATAATTTTTTT+GGG | + | chr5_4:56550514-56550533 | Msa0858770:three_prime_UTR | 15.0% |
| !!! | TTTCATGTTTTGATACATTA+TGG | + | chr5_4:56550392-56550411 | Msa0858770:three_prime_UTR | 20.0% |
| !!! | TTCATGTTTTGATACATTAT+GGG | + | chr5_4:56550393-56550412 | Msa0858770:three_prime_UTR | 20.0% |
| !!! | CATCTTAATCTCATTAGTTT+TGG | + | chr5_4:56550421-56550440 | Msa0858770:three_prime_UTR | 25.0% |
| !! | TTGTCTTTTTCATCTTTCAG+CGG | + | chr5_4:56550048-56550067 | Msa0858770:CDS | 30.0% |
| !! | CTATTGTTTGCTTTTATCAG+TGG | + | chr5_4:56550212-56550231 | Msa0858770:intron | 30.0% |
| CCTTAGAATCTCGTTATATT+CGG | + | chr5_4:56550473-56550492 | Msa0858770:three_prime_UTR | 30.0% | |
| CAAGGTTGCAACGATTTATA+GGG | - | chr5_4:56550031-56550050 | None:intergenic | 35.0% | |
| ACAAGGTTGCAACGATTTAT+AGG | - | chr5_4:56550032-56550051 | None:intergenic | 35.0% | |
| GCTGAAAGATGAAAAAGACA+AGG | - | chr5_4:56550049-56550068 | None:intergenic | 35.0% | |
| TTTGTCGTAAACCTAGTTGA+TGG | - | chr5_4:56550074-56550093 | None:intergenic | 35.0% | |
| AGCAGTGAAATAGTTTACCT+TGG | - | chr5_4:56550121-56550140 | None:intergenic | 35.0% | |
| TAGATCTCTGTCTCATCTTT+CGG | - | chr5_4:56550273-56550292 | None:intergenic | 35.0% | |
| CCGAATATAACGAGATTCTA+AGG | - | chr5_4:56550476-56550495 | None:intergenic | 35.0% | |
| GAGATCTAAGTAGTGAGCTT+TGG | + | chr5_4:56550285-56550304 | Msa0858770:exon | 40.0% | |
| GATGCAGTCTAGCAGAAATT+GGG | + | chr5_4:56550573-56550592 | Msa0858770:three_prime_UTR | 40.0% | |
| ! | ACCTTGGCTCTCATCTTGAA+CGG | - | chr5_4:56550105-56550124 | None:intergenic | 45.0% |
| ! | AGTGGAAGAAGAAGCGTATG+AGG | + | chr5_4:56550230-56550249 | Msa0858770:intron | 45.0% |
| AGCGTATGAGGAGATTGAAG+AGG | + | chr5_4:56550242-56550261 | Msa0858770:CDS | 45.0% | |
| CGATGCAGTCTAGCAGAAAT+TGG | + | chr5_4:56550572-56550591 | Msa0858770:three_prime_UTR | 45.0% | |
| TCTTTCAGCGGCCATCAACT+AGG | + | chr5_4:56550060-56550079 | Msa0858770:CDS | 50.0% | |
| ACCGTTCAAGATGAGAGCCA+AGG | + | chr5_4:56550101-56550120 | Msa0858770:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 56550020 | 56550602 | 56550020 | ID=Msa0858770;Name=Msa0858770 |
| chr5_4 | mRNA | 56550020 | 56550602 | 56550020 | ID=Msa0858770-mRNA-1;Parent=Msa0858770;Name=Msa0858770-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|309|54 |
| chr5_4 | exon | 56550020 | 56550122 | 56550020 | ID=Msa0858770-mRNA-1:exon:17262;Parent=Msa0858770-mRNA-1 |
| chr5_4 | exon | 56550232 | 56550602 | 56550232 | ID=Msa0858770-mRNA-1:exon:17263;Parent=Msa0858770-mRNA-1 |
| chr5_4 | CDS | 56550020 | 56550122 | 56550020 | ID=Msa0858770-mRNA-1:cds;Parent=Msa0858770-mRNA-1 |
| chr5_4 | CDS | 56550232 | 56550293 | 56550232 | ID=Msa0858770-mRNA-1:cds;Parent=Msa0858770-mRNA-1 |
| chr5_4 | three_prime_UTR | 56550294 | 56550602 | 56550294 | ID=Msa0858770-mRNA-1:three_prime_utr;Parent=Msa0858770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
