Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150150 | XP_024628980.1 | 93.390 | 590 | 39 | 0 | 1 | 590 | 1 | 590 | 0.0 | 1152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150150 | sp|Q9LYD8|GGLO3_ARATH | 65.350 | 557 | 186 | 4 | 28 | 579 | 22 | 576 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150150 | A0A1S2Y2S8 | 80.905 | 597 | 102 | 2 | 4 | 591 | 5 | 598 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008620 | Msa0150150 | 0.841873 | 3.648773e-58 | -8.615850e-47 |
| Msa0008880 | Msa0150150 | 0.853258 | 2.691046e-61 | -8.615850e-47 |
| Msa0058850 | Msa0150150 | 0.861726 | 8.377720e-64 | -8.615850e-47 |
| Msa0058910 | Msa0150150 | 0.869804 | 2.351998e-66 | -8.615850e-47 |
| Msa0103720 | Msa0150150 | 0.895234 | 1.163352e-75 | -8.615850e-47 |
| Msa0150100 | Msa0150150 | 0.897771 | 1.017078e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150150 | MtrunA17_Chr1g0157561 | 93.611 | 360 | 23 | 0 | 231 | 590 | 19 | 378 | 0.0 | 708 |
| Msa0150150 | MtrunA17_Chr8g0346061 | 48.342 | 573 | 285 | 6 | 14 | 578 | 10 | 579 | 0.0 | 558 |
| Msa0150150 | MtrunA17_Chr5g0394031 | 49.107 | 560 | 273 | 7 | 28 | 579 | 28 | 583 | 1.01e-180 | 523 |
| Msa0150150 | MtrunA17_Chr1g0157571 | 92.672 | 232 | 17 | 0 | 1 | 232 | 1 | 232 | 1.44e-156 | 447 |
| Msa0150150 | MtrunA17_Chr1g0157541 | 91.852 | 135 | 11 | 0 | 366 | 500 | 1 | 135 | 2.57e-85 | 261 |
| Msa0150150 | MtrunA17_Chr1g0172001 | 91.026 | 78 | 7 | 0 | 404 | 481 | 11 | 88 | 2.14e-43 | 150 |
| Msa0150150 | MtrunA17_Chr7g0276181 | 47.794 | 136 | 69 | 1 | 446 | 579 | 16 | 151 | 2.98e-36 | 132 |
| Msa0150150 | MtrunA17_Chr7g0276161 | 43.220 | 118 | 65 | 1 | 30 | 145 | 27 | 144 | 5.98e-28 | 109 |
| Msa0150150 | MtrunA17_Chr8g0346031 | 43.262 | 141 | 53 | 2 | 163 | 302 | 12 | 126 | 6.86e-27 | 106 |
| Msa0150150 | MtrunA17_Chr1g0159391 | 82.143 | 56 | 9 | 1 | 510 | 564 | 10 | 65 | 7.94e-25 | 100 |
| Msa0150150 | MtrunA17_Chr8g0346041 | 60.784 | 51 | 20 | 0 | 454 | 504 | 6 | 56 | 1.64e-16 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150150 | AT5G11540.1 | 65.350 | 557 | 186 | 4 | 28 | 579 | 22 | 576 | 0.0 | 758 |
| Msa0150150 | AT2G46740.1 | 46.359 | 563 | 289 | 7 | 27 | 578 | 25 | 585 | 0.0 | 531 |
| Msa0150150 | AT2G46750.1 | 46.714 | 563 | 287 | 7 | 27 | 578 | 21 | 581 | 0.0 | 526 |
| Msa0150150 | AT2G46760.1 | 45.156 | 578 | 304 | 6 | 9 | 578 | 17 | 589 | 0.0 | 526 |
| Msa0150150 | AT5G56490.1 | 45.648 | 563 | 295 | 7 | 30 | 583 | 17 | 577 | 1.36e-167 | 489 |
| Msa0150150 | AT1G32300.1 | 44.041 | 579 | 307 | 8 | 9 | 578 | 3 | 573 | 4.22e-167 | 489 |
| Msa0150150 | AT5G56470.1 | 49.576 | 236 | 114 | 3 | 348 | 578 | 12 | 247 | 1.22e-78 | 249 |
Find 118 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGTTTCTCTTGGAGTTT+TGG | 0.192601 | 1_4:-11413070 | Msa0150150:CDS |
| CTGTTTATAGATACGATTTC+AGG | 0.197781 | 1_4:-11409516 | Msa0150150:CDS |
| TTGTTGGGTATGTTACATTT+AGG | 0.199389 | 1_4:+11413544 | None:intergenic |
| GTTTGGTGGCTGCACCTTAT+TGG | 0.236643 | 1_4:-11413272 | Msa0150150:CDS |
| TCCATCACCAGAGGCATCTA+AGG | 0.274681 | 1_4:+11409489 | None:intergenic |
| CCAAGATGTGTGGGAGGAAT+TGG | 0.278330 | 1_4:-11408464 | Msa0150150:CDS |
| TGTTGGGTATGTTACATTTA+GGG | 0.279673 | 1_4:+11413545 | None:intergenic |
| ATTATTCATTGAAGTGAATA+AGG | 0.280510 | 1_4:+11408112 | None:intergenic |
| AGACATTGTAGTCCTCAAAA+AGG | 0.283988 | 1_4:-11408205 | Msa0150150:CDS |
| TGTTGTGGGCATGATAGTTT+TGG | 0.285024 | 1_4:+11413435 | None:intergenic |
| TTCACCAGATATCCTGTAAT+TGG | 0.285170 | 1_4:-11408811 | Msa0150150:CDS |
| TTTGGTGGCTGCACCTTATT+GGG | 0.293408 | 1_4:-11413271 | Msa0150150:CDS |
| GGAGTTATGCTATGGATTAA+AGG | 0.297527 | 1_4:+11413651 | None:intergenic |
| TTTCCTTGATAGCCAATTAC+AGG | 0.297690 | 1_4:+11408799 | None:intergenic |
| TAAACAGCTGTGTGCCTTGA+TGG | 0.304478 | 1_4:+11409532 | None:intergenic |
| GCATGGGATCCAAGAATAAA+AGG | 0.315226 | 1_4:-11408724 | Msa0150150:CDS |
| TTGACTGTAACAGTTGATTC+AGG | 0.326698 | 1_4:-11413342 | Msa0150150:CDS |
| TGTGGCATAGACATCTATAA+TGG | 0.334215 | 1_4:-11408601 | Msa0150150:CDS |
| GTGATAAAGGCAACATTGAT+AGG | 0.342663 | 1_4:+11407995 | None:intergenic |
| GGTTTAGTCTAGGAGTAAAT+TGG | 0.363582 | 1_4:+11408485 | None:intergenic |
| ATAGCCAATTACAGGATATC+TGG | 0.364535 | 1_4:+11408807 | None:intergenic |
| CGAAGTTGTTCTTCTGTTGT+TGG | 0.372174 | 1_4:+11413528 | None:intergenic |
| CTGAGAGACCAGTATTTCAT+TGG | 0.374536 | 1_4:+11409441 | None:intergenic |
| CCAATTCCTCCCACACATCT+TGG | 0.377015 | 1_4:+11408464 | None:intergenic |
| GAGTTATGCTATGGATTAAA+GGG | 0.379012 | 1_4:+11413652 | None:intergenic |
| AAAGCGAACACACGTGATAA+AGG | 0.384174 | 1_4:+11407971 | None:intergenic |
| TTTGAAGGGTGCAGATTGTT+TGG | 0.385906 | 1_4:+11413607 | None:intergenic |
| GATGGAGTCTATGATTTCAT+TGG | 0.393398 | 1_4:-11409472 | Msa0150150:CDS |
| GATTGTTTGGTTGCATTGGA+TGG | 0.395081 | 1_4:+11413620 | None:intergenic |
| CACATACTTCCACTATTCAT+AGG | 0.396512 | 1_4:-11413681 | Msa0150150:CDS |
| CAGGATATCTGGTGAAGATT+AGG | 0.398845 | 1_4:+11408818 | None:intergenic |
| ATTTCAAGCCAATGAAATAC+TGG | 0.405185 | 1_4:-11409449 | Msa0150150:CDS |
| ACGTGATAAAGGTGTGATAA+AGG | 0.406426 | 1_4:+11407982 | None:intergenic |
| TATTGGGAAGGTGTTACAAT+TGG | 0.410864 | 1_4:-11413255 | Msa0150150:CDS |
| TGCAGATTGTTTGGTTGCAT+TGG | 0.412058 | 1_4:+11413616 | None:intergenic |
| TGGGAAGGTGTTACAATTGG+AGG | 0.412609 | 1_4:-11413252 | Msa0150150:CDS |
| AGGGTTCCCTTAGATGCCTC+TGG | 0.413308 | 1_4:-11409496 | Msa0150150:CDS |
| ATGCTATGGATTAAAGGGTT+TGG | 0.417400 | 1_4:+11413657 | None:intergenic |
| ATTGTAACACCTTCCCAATA+AGG | 0.428496 | 1_4:+11413258 | None:intergenic |
| AAGGAATTGGTAAAATTTGA+TGG | 0.430551 | 1_4:-11408265 | Msa0150150:CDS |
| GCCATTGTTCTTCAAACCAT+TGG | 0.432966 | 1_4:+11408840 | None:intergenic |
| CCCTTAGATGCCTCTGGTGA+TGG | 0.436882 | 1_4:-11409490 | Msa0150150:CDS |
| ATGAGTTTGCTGACATAACT+TGG | 0.446108 | 1_4:-11409558 | Msa0150150:CDS |
| ACAAGGAAGCTAAAGTTTGT+AGG | 0.446243 | 1_4:-11408156 | Msa0150150:CDS |
| AATGCTGCACAAGTTTCTCT+TGG | 0.447796 | 1_4:-11413078 | Msa0150150:CDS |
| TGTTGTTCAAAACAACCTTA+AGG | 0.448231 | 1_4:-11413490 | Msa0150150:CDS |
| ATTGGAGGTGTTATTAGTAC+TGG | 0.462333 | 1_4:-11413237 | Msa0150150:CDS |
| TGCACATGGTAGTTCTTGGT+GGG | 0.463800 | 1_4:-11413214 | Msa0150150:CDS |
| TATCCTGTAATTGGCTATCA+AGG | 0.467281 | 1_4:-11408802 | Msa0150150:CDS |
| TTGCATTGGATGGGAGATTG+TGG | 0.467626 | 1_4:+11413630 | None:intergenic |
| GTGCACATGGTAGTTCTTGG+TGG | 0.467984 | 1_4:-11413215 | Msa0150150:CDS |
| GAAGTTGTTCTTCTGTTGTT+GGG | 0.468307 | 1_4:+11413529 | None:intergenic |
| TAAAATCCACCACATCCAAT+AGG | 0.468753 | 1_4:+11413713 | None:intergenic |
| TTGTCATGCAGAGGAATTGC+TGG | 0.470947 | 1_4:-11408932 | Msa0150150:intron |
| AAAATTTGATGGCTGTGCTT+TGG | 0.471057 | 1_4:-11408254 | Msa0150150:CDS |
| TCTCAGTCAGTTAGAGCAGC+AGG | 0.472911 | 1_4:-11409424 | Msa0150150:intron |
| TTCAAGAAATTAACAGCCAA+TGG | 0.477497 | 1_4:-11408856 | Msa0150150:CDS |
| CTGGTGCACATGGTAGTTCT+TGG | 0.479918 | 1_4:-11413218 | Msa0150150:CDS |
| TAATAGATATATGAAACAAA+TGG | 0.482325 | 1_4:+11407939 | None:intergenic |
| TGATTCCAACCTCAAAACTT+TGG | 0.483399 | 1_4:+11413116 | None:intergenic |
| AAAGCCTCAGAAGCATATCT+AGG | 0.484079 | 1_4:-11408559 | Msa0150150:CDS |
| TTAACAGCATCCACTACATT+GGG | 0.484270 | 1_4:-11408880 | Msa0150150:CDS |
| CACACATCTTGGTTTAGTCT+AGG | 0.490104 | 1_4:+11408475 | None:intergenic |
| AGCCACATTGGGCTAAGAAT+AGG | 0.494478 | 1_4:-11408411 | Msa0150150:CDS |
| AAAACACAGGAAACACGAAC+GGG | 0.494628 | 1_4:-11408909 | Msa0150150:CDS |
| AAAGGGTATTATTGTAGTCA+TGG | 0.500442 | 1_4:-11408187 | Msa0150150:CDS |
| TGTTTATAGATACGATTTCA+GGG | 0.502251 | 1_4:-11409515 | Msa0150150:CDS |
| GGGTTTGGTCCTATGAATAG+TGG | 0.508529 | 1_4:+11413672 | None:intergenic |
| GGTAGTTCTTGGTGGGGCAA+AGG | 0.509312 | 1_4:-11413207 | Msa0150150:CDS |
| CTTAACAGCATCCACTACAT+TGG | 0.511042 | 1_4:-11408881 | Msa0150150:CDS |
| AGTTCTTGGTGGGGCAAAGG+TGG | 0.513089 | 1_4:-11413204 | Msa0150150:CDS |
| TTACTACCTATTGGATGTGG+TGG | 0.517825 | 1_4:-11413719 | Msa0150150:CDS |
| GTATGGTGCTAAGCCACATT+GGG | 0.518685 | 1_4:-11408422 | Msa0150150:CDS |
| GAAAGGGTATTGAAATGAAA+GGG | 0.525672 | 1_4:+11413766 | None:intergenic |
| TTCAAAACTCGTACGGCACA+TGG | 0.525730 | 1_4:-11413590 | Msa0150150:CDS |
| TTTCTTGAATCCCAATGTAG+TGG | 0.532470 | 1_4:+11408870 | None:intergenic |
| GTGGCTGCACCTTATTGGGA+AGG | 0.543644 | 1_4:-11413267 | Msa0150150:CDS |
| ATTGTTTGGTTGCATTGGAT+GGG | 0.545187 | 1_4:+11413621 | None:intergenic |
| GATCCACAAGATGTGTTCTC+TGG | 0.545238 | 1_4:-11408316 | Msa0150150:CDS |
| AGTATGGTGCTAAGCCACAT+TGG | 0.547690 | 1_4:-11408423 | Msa0150150:CDS |
| GAATAGACACATCATGTGCA+TGG | 0.549476 | 1_4:-11408741 | Msa0150150:CDS |
| TGGTGATGATTGTGGTGAAA+GGG | 0.549933 | 1_4:+11413750 | None:intergenic |
| AAAATTGTATACCTTGGAGA+TGG | 0.550760 | 1_4:+11413044 | None:intergenic |
| GTTCCTAGTTCTGAATCTGA+AGG | 0.558107 | 1_4:-11413144 | Msa0150150:CDS |
| AAGATGTGTTCTCTGGTGAT+TGG | 0.565409 | 1_4:-11408309 | Msa0150150:CDS |
| TGAAAGGGTATTGAAATGAA+AGG | 0.565709 | 1_4:+11413765 | None:intergenic |
| TACCCTTCAGATTCAGAACT+AGG | 0.567964 | 1_4:+11413141 | None:intergenic |
| ACATAACTTGGTATCCATCA+AGG | 0.572043 | 1_4:-11409546 | Msa0150150:CDS |
| TAGTCATGGACTTGTCTACA+AGG | 0.572831 | 1_4:-11408173 | Msa0150150:CDS |
| GAAAACACAGGAAACACGAA+CGG | 0.576013 | 1_4:-11408910 | Msa0150150:CDS |
| TGCACCCTTCAAAACTCGTA+CGG | 0.576208 | 1_4:-11413597 | Msa0150150:CDS |
| TGAAGTTATCACTTGAGCAT+AGG | 0.581177 | 1_4:-11409657 | Msa0150150:CDS |
| GCACATGGTAGTTCTTGGTG+GGG | 0.581419 | 1_4:-11413213 | Msa0150150:CDS |
| TTGTCCTAGATATGCTTCTG+AGG | 0.582676 | 1_4:+11408555 | None:intergenic |
| TCACCAGAGAACACATCTTG+TGG | 0.585752 | 1_4:+11408313 | None:intergenic |
| TGATAAAGGCAACATTGATA+GGG | 0.586753 | 1_4:+11407996 | None:intergenic |
| GAGATTGTGGAGTTATGCTA+TGG | 0.590139 | 1_4:+11413643 | None:intergenic |
| TTTGATGGCTGTGCTTTGGA+AGG | 0.590529 | 1_4:-11408250 | Msa0150150:CDS |
| TTCCTAGTTCTGAATCTGAA+GGG | 0.594559 | 1_4:-11413143 | Msa0150150:CDS |
| TAGACTAAACCAAGATGTGT+GGG | 0.597289 | 1_4:-11408473 | Msa0150150:CDS |
| AATAGACACATCATGTGCAT+GGG | 0.601730 | 1_4:-11408740 | Msa0150150:CDS |
| GCCAATGGTTTGAAGAACAA+TGG | 0.605151 | 1_4:-11408841 | Msa0150150:CDS |
| GTTATTAGTACTGGTGCACA+TGG | 0.614209 | 1_4:-11413228 | Msa0150150:CDS |
| GTGGTGATGATTGTGGTGAA+AGG | 0.614371 | 1_4:+11413749 | None:intergenic |
| CCATCACCAGAGGCATCTAA+GGG | 0.617174 | 1_4:+11409490 | None:intergenic |
| TTCCTATTCTTAGCCCAATG+TGG | 0.624843 | 1_4:+11408409 | None:intergenic |
| CTAGACTAAACCAAGATGTG+TGG | 0.630678 | 1_4:-11408474 | Msa0150150:CDS |
| AAAGGCAACATTGATAGGGA+CGG | 0.630900 | 1_4:+11408000 | None:intergenic |
| GAGGAATTGCTGGAAAACAC+AGG | 0.634296 | 1_4:-11408922 | Msa0150150:CDS |
| TCTAGGACAATCAGAAGACT+CGG | 0.645708 | 1_4:-11408542 | Msa0150150:CDS |
| AAGCCATGTGGTGATGATTG+TGG | 0.654720 | 1_4:+11413742 | None:intergenic |
| ACTAAACCAAGATGTGTGGG+AGG | 0.655927 | 1_4:-11408470 | Msa0150150:CDS |
| ACTTGTGCAGCATTAAACAA+AGG | 0.660665 | 1_4:+11413087 | None:intergenic |
| TAGATATATGAAACAAATGG+AGG | 0.660802 | 1_4:+11407942 | None:intergenic |
| ATCATAGACTCCATCACCAG+AGG | 0.673916 | 1_4:+11409480 | None:intergenic |
| TCACCACAATCATCACCACA+TGG | 0.687510 | 1_4:-11413745 | Msa0150150:exon |
| AATAGGTAGTAAAAGCCATG+TGG | 0.730343 | 1_4:+11413730 | None:intergenic |
| CATAACATTCAATTTCACTG+AGG | 0.730952 | 1_4:-11409623 | Msa0150150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTACAGTTTTAAA+TGG | + | chr1_4:11408795-11408814 | None:intergenic | 10.0% |
| !! | ATATTAAGAAAAAATAATTG+TGG | + | chr1_4:11408890-11408909 | None:intergenic | 10.0% |
| !! | TTTAAAAAAATTATTCAATG+CGG | + | chr1_4:11409484-11409503 | None:intergenic | 10.0% |
| !!! | ATAAAGTAATTTTTTACATT+TGG | - | chr1_4:11409675-11409694 | Msa0150150:intron | 10.0% |
| !!! | TAAAGTAATTTTTTACATTT+GGG | - | chr1_4:11409676-11409695 | Msa0150150:intron | 10.0% |
| !! | ATAATTCTTGATATCATTAT+AGG | + | chr1_4:11408823-11408842 | None:intergenic | 15.0% |
| !! | TAGAAATATGATATTTGTAT+AGG | + | chr1_4:11409143-11409162 | None:intergenic | 15.0% |
| !! | TTAAAAAAATTATTCAATGC+GGG | + | chr1_4:11409483-11409502 | None:intergenic | 15.0% |
| !!! | ACATTTTATAATATATGTAG+AGG | - | chr1_4:11410283-11410302 | Msa0150150:intron | 15.0% |
| !! | ATGTTCTTGATTTATTTATA+TGG | + | chr1_4:11410538-11410557 | None:intergenic | 15.0% |
| !!! | TAATTTTTAGATTGTTAGAT+TGG | + | chr1_4:11410761-11410780 | None:intergenic | 15.0% |
| !! | ATAACCAATTAAAGATAATA+AGG | - | chr1_4:11412389-11412408 | Msa0150150:intron | 15.0% |
| !! | AAAACCTTATTATCTTTAAT+TGG | + | chr1_4:11412396-11412415 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAAACTTCGAAA+AGG | - | chr1_4:11412474-11412493 | Msa0150150:intron | 15.0% |
| !!! | TTTTTAAAAAACTTCGAAAA+GGG | - | chr1_4:11412475-11412494 | Msa0150150:intron | 15.0% |
| !!! | TTTTTGGTATTTTGAAAAAT+CGG | + | chr1_4:11412697-11412716 | None:intergenic | 15.0% |
| !! | TCAATAAAAAGATTAAAGTT+AGG | + | chr1_4:11413376-11413395 | None:intergenic | 15.0% |
| !!! | AATTTTGAAAGTTCTCTTAA+AGG | + | chr1_4:11408732-11408751 | None:intergenic | 20.0% |
| !! | TAAAAAAATTATTCAATGCG+GGG | + | chr1_4:11409482-11409501 | None:intergenic | 20.0% |
| !! | AATTGAGATATGATATAAGT+AGG | + | chr1_4:11409878-11409897 | None:intergenic | 20.0% |
| !!! | TTTTAAGCAGAAAATATTGA+AGG | - | chr1_4:11410163-11410182 | Msa0150150:intron | 20.0% |
| !!! | CCTTTTTAAGATAAATAAGT+GGG | + | chr1_4:11410330-11410349 | None:intergenic | 20.0% |
| !!! | ACCTTTTTAAGATAAATAAG+TGG | + | chr1_4:11410331-11410350 | None:intergenic | 20.0% |
| !! | GTTGACGATAAAAAAAAATT+AGG | - | chr1_4:11410422-11410441 | Msa0150150:intron | 20.0% |
| !! | CGATAAAAAAAAATTAGGTA+AGG | - | chr1_4:11410427-11410446 | Msa0150150:intron | 20.0% |
| !!! | ATAACGATATTCTTTTTAAC+GGG | + | chr1_4:11410608-11410627 | None:intergenic | 20.0% |
| !!! | CATAACGATATTCTTTTTAA+CGG | + | chr1_4:11410609-11410628 | None:intergenic | 20.0% |
| !!! | TAATTTTTCTAACAACTGTT+TGG | + | chr1_4:11410647-11410666 | None:intergenic | 20.0% |
| !! | ATTGGATATTGTTCAAATAT+CGG | - | chr1_4:11411286-11411305 | Msa0150150:intron | 20.0% |
| !! | AGAAAAATTTGTAAATTGGT+TGG | + | chr1_4:11411639-11411658 | None:intergenic | 20.0% |
| !! | CAACAGAAAAATTTGTAAAT+TGG | + | chr1_4:11411643-11411662 | None:intergenic | 20.0% |
| !! | ATGTAATTACTGTAATTAAG+AGG | + | chr1_4:11411898-11411917 | None:intergenic | 20.0% |
| !! | TATTTGTAAAGTAACTTCTT+CGG | + | chr1_4:11411950-11411969 | None:intergenic | 20.0% |
| !! | ATTATTGTCATGTTATTCTT+AGG | - | chr1_4:11412361-11412380 | Msa0150150:intron | 20.0% |
| !!! | TCGAAGTTTTTTAAAAAAGT+TGG | + | chr1_4:11412472-11412491 | None:intergenic | 20.0% |
| !!! | ATTTGACTTTATAACTTCAA+GGG | + | chr1_4:11412568-11412587 | None:intergenic | 20.0% |
| !!! | AATTTGACTTTATAACTTCA+AGG | + | chr1_4:11412569-11412588 | None:intergenic | 20.0% |
| !! | CAATAAATAAACTAAAGACA+AGG | - | chr1_4:11412620-11412639 | Msa0150150:intron | 20.0% |
| !! | CAACATTGAAGTTATATTAT+AGG | + | chr1_4:11412779-11412798 | None:intergenic | 20.0% |
| !!! | ATAAATCCACAAAATTTTTG+TGG | - | chr1_4:11413109-11413128 | Msa0150150:CDS | 20.0% |
| !! | TATTGAAGCTAAAAAACAAA+TGG | - | chr1_4:11413390-11413409 | Msa0150150:CDS | 20.0% |
| !! | ATTATTCATTGAAGTGAATA+AGG | + | chr1_4:11413619-11413638 | None:intergenic | 20.0% |
| !!! | ATTTCTTTTAAGAAATGATG+AGG | - | chr1_4:11413697-11413716 | Msa0150150:CDS | 20.0% |
| !! | ATGAAAGGGATTATGATTTT+TGG | + | chr1_4:11407951-11407970 | None:intergenic | 25.0% |
| !! | TGAGAATTTTGTGACAATTT+TGG | + | chr1_4:11408264-11408283 | None:intergenic | 25.0% |
| !!! | CATGATTATTGTTTTGTTGT+GGG | + | chr1_4:11408310-11408329 | None:intergenic | 25.0% |
| ! | ATTGATGAAGTTGAGAAAAA+TGG | - | chr1_4:11408428-11408447 | Msa0150150:CDS | 25.0% |
| !! | TGAGAAAAATGGATTTAGTT+TGG | - | chr1_4:11408439-11408458 | Msa0150150:CDS | 25.0% |
| ! | GAATTGAAAATTGTATACCT+TGG | + | chr1_4:11408693-11408712 | None:intergenic | 25.0% |
| !! | CATTAATTTGATTTCTTGTC+TGG | - | chr1_4:11408977-11408996 | Msa0150150:intron | 25.0% |
| ! | GAACTTTGTCTAATATACAT+AGG | - | chr1_4:11409234-11409253 | Msa0150150:intron | 25.0% |
| ! | ACGAGTAAGTATATTAGAAT+CGG | + | chr1_4:11409375-11409394 | None:intergenic | 25.0% |
| !! | TCACTTTAACATTTGTTAGA+CGG | - | chr1_4:11409569-11409588 | Msa0150150:CDS | 25.0% |
| ! | AAACTACCATTGATGTTTAA+AGG | + | chr1_4:11409610-11409629 | None:intergenic | 25.0% |
| !!! | GTAATTTTTTACATTTGGGA+CGG | - | chr1_4:11409680-11409699 | Msa0150150:intron | 25.0% |
| !!! | TAATTTTTTACATTTGGGAC+GGG | - | chr1_4:11409681-11409700 | Msa0150150:intron | 25.0% |
| ! | AACTTAACTCTGACTTTAAA+TGG | + | chr1_4:11409980-11409999 | None:intergenic | 25.0% |
| ! | TATAATATATGTAGAGGTTG+AGG | - | chr1_4:11410289-11410308 | Msa0150150:intron | 25.0% |
| ! | CCCACTTATTTATCTTAAAA+AGG | - | chr1_4:11410327-11410346 | Msa0150150:intron | 25.0% |
| ! | AGAAAGAACCCTTAATAATT+CGG | - | chr1_4:11410386-11410405 | Msa0150150:intron | 25.0% |
| !!! | TTTTTTTTATCGTCAACTCA+TGG | + | chr1_4:11410419-11410438 | None:intergenic | 25.0% |
| ! | TTGTTTAATTCGCTTTGTAA+AGG | + | chr1_4:11410696-11410715 | None:intergenic | 25.0% |
| !! | CCTAAAAAATCAGTTTGTTT+CGG | + | chr1_4:11410945-11410964 | None:intergenic | 25.0% |
| !!! | CGAAACAAACTGATTTTTTA+GGG | - | chr1_4:11410943-11410962 | Msa0150150:intron | 25.0% |
| !!! | GAAACAAACTGATTTTTTAG+GGG | - | chr1_4:11410944-11410963 | Msa0150150:intron | 25.0% |
| ! | GGATTGATAAAGTTTACATA+TGG | + | chr1_4:11411498-11411517 | None:intergenic | 25.0% |
| ! | AAGAGAGTTGTTTATTATTG+AGG | - | chr1_4:11411564-11411583 | Msa0150150:intron | 25.0% |
| ! | AGAGAGTTGTTTATTATTGA+GGG | - | chr1_4:11411565-11411584 | Msa0150150:intron | 25.0% |
| ! | GTAATTACATAGTACTATGT+AGG | - | chr1_4:11411908-11411927 | Msa0150150:intron | 25.0% |
| !! | ACTATAATTTTTCACCTCTT+AGG | - | chr1_4:11411986-11412005 | Msa0150150:intron | 25.0% |
| !! | CTATAATTTTTCACCTCTTA+GGG | - | chr1_4:11411987-11412006 | Msa0150150:intron | 25.0% |
| ! | TATCATTGTTAAATGATGTC+AGG | - | chr1_4:11412048-11412067 | Msa0150150:intron | 25.0% |
| ! | TGTTTATAGATACGATTTCA+GGG | - | chr1_4:11412213-11412232 | Msa0150150:intron | 25.0% |
| !!! | AGATAATAAGGTTTTGTTAC+TGG | - | chr1_4:11412401-11412420 | Msa0150150:intron | 25.0% |
| !! | GATCATTTTACAATTGTCTT+CGG | - | chr1_4:11412525-11412544 | Msa0150150:intron | 25.0% |
| !! | AAGAACAATCCTTTTATTCT+TGG | + | chr1_4:11413016-11413035 | None:intergenic | 25.0% |
| !! | ATTTTACCTGCTTCAAAATT+TGG | - | chr1_4:11413052-11413071 | Msa0150150:intron | 25.0% |
| ! | AAGGAATTGGTAAAATTTGA+TGG | - | chr1_4:11413463-11413482 | Msa0150150:CDS | 25.0% |
| ! | TAGATATATGAAACAAATGG+AGG | + | chr1_4:11413789-11413808 | None:intergenic | 25.0% |
| !! | GAAAGGGTATTGAAATGAAA+GGG | + | chr1_4:11407965-11407984 | None:intergenic | 30.0% |
| !! | TGAAAGGGTATTGAAATGAA+AGG | + | chr1_4:11407966-11407985 | None:intergenic | 30.0% |
| ! | GAGTTATGCTATGGATTAAA+GGG | + | chr1_4:11408079-11408098 | None:intergenic | 30.0% |
| TGTTGGGTATGTTACATTTA+GGG | + | chr1_4:11408186-11408205 | None:intergenic | 30.0% | |
| TTGTTGGGTATGTTACATTT+AGG | + | chr1_4:11408187-11408206 | None:intergenic | 30.0% | |
| !!! | AAGGTTGTTTTGAACAACAT+AGG | + | chr1_4:11408237-11408256 | None:intergenic | 30.0% |
| TGTTGTTCAAAACAACCTTA+AGG | - | chr1_4:11408238-11408257 | Msa0150150:CDS | 30.0% | |
| !! | GCATGATTATTGTTTTGTTG+TGG | + | chr1_4:11408311-11408330 | None:intergenic | 30.0% |
| !! | GAAAAATGGATTTAGTTTGG+TGG | - | chr1_4:11408442-11408461 | Msa0150150:CDS | 30.0% |
| ! | TGCTTTTCATGATCATGTTT+TGG | - | chr1_4:11408547-11408566 | Msa0150150:CDS | 30.0% |
| ! | GCTTTTCATGATCATGTTTT+GGG | - | chr1_4:11408548-11408567 | Msa0150150:CDS | 30.0% |
| AAAATTGTATACCTTGGAGA+TGG | + | chr1_4:11408687-11408706 | None:intergenic | 30.0% | |
| TGAAAGTTCTCTTAAAGGAA+TGG | + | chr1_4:11408727-11408746 | None:intergenic | 30.0% | |
| AGTATATTAGAATCGGGTAT+GGG | + | chr1_4:11409368-11409387 | None:intergenic | 30.0% | |
| AAGTATATTAGAATCGGGTA+TGG | + | chr1_4:11409369-11409388 | None:intergenic | 30.0% | |
| CGAGTAAGTATATTAGAATC+GGG | + | chr1_4:11409374-11409393 | None:intergenic | 30.0% | |
| GTTGATCCTTTAAACATCAA+TGG | - | chr1_4:11409601-11409620 | Msa0150150:CDS | 30.0% | |
| TGATTTCAAAACACGTGTAT+GGG | + | chr1_4:11409752-11409771 | None:intergenic | 30.0% | |
| !!! | ATACACGTGTTTTGAAATCA+GGG | - | chr1_4:11409752-11409771 | Msa0150150:intron | 30.0% |
| AGATATGATATAAGTAGGCA+TGG | + | chr1_4:11409873-11409892 | None:intergenic | 30.0% | |
| !! | TGTATTATGTACAAGTTGGT+TGG | + | chr1_4:11410056-11410075 | None:intergenic | 30.0% |
| GTTGTGTATTATGTACAAGT+TGG | + | chr1_4:11410060-11410079 | None:intergenic | 30.0% | |
| CAGCATTGTATTAAACAAGT+AGG | + | chr1_4:11410087-11410106 | None:intergenic | 30.0% | |
| AAGATAAATAAGTGGGTATC+TGG | + | chr1_4:11410323-11410342 | None:intergenic | 30.0% | |
| ! | TTCTTTTTGTGTTAACCTTC+AGG | - | chr1_4:11410355-11410374 | Msa0150150:intron | 30.0% |
| TATTAAGGGTTCTTTCTCTA+AGG | + | chr1_4:11410383-11410402 | None:intergenic | 30.0% | |
| ACCCTTAATAATTCGGAATT+CGG | - | chr1_4:11410393-11410412 | Msa0150150:intron | 30.0% | |
| AGAACTTTGTCTTCTCAAAT+TGG | + | chr1_4:11410503-11410522 | None:intergenic | 30.0% | |
| ATCAACCATTTCATGAACAT+TGG | - | chr1_4:11410575-11410594 | Msa0150150:intron | 30.0% | |
| !! | TAACAACTGTTTGGTGTATT+TGG | + | chr1_4:11410638-11410657 | None:intergenic | 30.0% |
| !! | TAGATTGGAAAGCATTTGAT+TGG | + | chr1_4:11410746-11410765 | None:intergenic | 30.0% |
| ! | CAGAAAGACTCAAAAAGTAT+GGG | + | chr1_4:11410787-11410806 | None:intergenic | 30.0% |
| ! | TATTGTGTCTTTTGCTTTGA+CGG | + | chr1_4:11410843-11410862 | None:intergenic | 30.0% |
| ! | GCAAAAGACACAATATCTTT+TGG | - | chr1_4:11410848-11410867 | Msa0150150:intron | 30.0% |
| GGTGGTAATTATTTCAGAAT+AGG | + | chr1_4:11410924-11410943 | None:intergenic | 30.0% | |
| ! | AAAAAATCAGTTTGTTTCGG+TGG | + | chr1_4:11410942-11410961 | None:intergenic | 30.0% |
| !!! | CCGAAACAAACTGATTTTTT+AGG | - | chr1_4:11410942-11410961 | Msa0150150:intron | 30.0% |
| !!! | TACAATTTTTTACAGCAGCT+CGG | + | chr1_4:11410990-11411009 | None:intergenic | 30.0% |
| AAAAAATGCTCTGATTGGAA+GGG | + | chr1_4:11411464-11411483 | None:intergenic | 30.0% | |
| ! | TTTTGGATGACAATGCAATT+TGG | + | chr1_4:11411524-11411543 | None:intergenic | 30.0% |
| ACATGCATTTAATGATCTCT+TGG | + | chr1_4:11411596-11411615 | None:intergenic | 30.0% | |
| TCAATCCATTTCCATCAAAA+TGG | + | chr1_4:11411688-11411707 | None:intergenic | 30.0% | |
| ! | ATTAATCGACTTCTTGAAGA+CGG | + | chr1_4:11411852-11411871 | None:intergenic | 30.0% |
| CATAACATTCAATTTCACTG+AGG | - | chr1_4:11412105-11412124 | Msa0150150:intron | 30.0% | |
| CTGTTTATAGATACGATTTC+AGG | - | chr1_4:11412212-11412231 | Msa0150150:intron | 30.0% | |
| ATTTCAAGCCAATGAAATAC+TGG | - | chr1_4:11412279-11412298 | Msa0150150:intron | 30.0% | |
| TTGGTTATTACTTACGAAGA+AGG | + | chr1_4:11412453-11412472 | None:intergenic | 30.0% | |
| ! | ATTTTACAATTGTCTTCGGA+GGG | - | chr1_4:11412529-11412548 | Msa0150150:intron | 30.0% |
| ATTGTTACTCCATAAGATCT+CGG | + | chr1_4:11412604-11412623 | None:intergenic | 30.0% | |
| TTCAAGAAATTAACAGCCAA+TGG | - | chr1_4:11412872-11412891 | Msa0150150:intron | 30.0% | |
| !!! | AAATCTCCAAATTTTGAAGC+AGG | + | chr1_4:11413061-11413080 | None:intergenic | 30.0% |
| ! | TCTATGCCACAAAAATTTTG+TGG | + | chr1_4:11413118-11413137 | None:intergenic | 30.0% |
| !!! | CAGATTGCATTTTTCAAGTA+TGG | - | chr1_4:11413289-11413308 | Msa0150150:CDS | 30.0% |
| ! | CTACAATAATACCCTTTTTG+AGG | + | chr1_4:11413538-11413557 | None:intergenic | 30.0% |
| !! | AAAGGGTATTATTGTAGTCA+TGG | - | chr1_4:11413541-11413560 | Msa0150150:CDS | 30.0% |
| TGATAAAGGCAACATTGATA+GGG | + | chr1_4:11413735-11413754 | None:intergenic | 30.0% | |
| AATAGGTAGTAAAAGCCATG+TGG | + | chr1_4:11408001-11408020 | None:intergenic | 35.0% | |
| ! | ACATGGCTTTTACTACCTAT+TGG | - | chr1_4:11408000-11408019 | Msa0150150:three_prime_UTR | 35.0% |
| ! | CTTTTACTACCTATTGGATG+TGG | - | chr1_4:11408006-11408025 | Msa0150150:three_prime_UTR | 35.0% |
| TAAAATCCACCACATCCAAT+AGG | + | chr1_4:11408018-11408037 | None:intergenic | 35.0% | |
| CACATACTTCCACTATTCAT+AGG | - | chr1_4:11408047-11408066 | Msa0150150:three_prime_UTR | 35.0% | |
| ! | ATGCTATGGATTAAAGGGTT+TGG | + | chr1_4:11408074-11408093 | None:intergenic | 35.0% |
| ! | GGAGTTATGCTATGGATTAA+AGG | + | chr1_4:11408080-11408099 | None:intergenic | 35.0% |
| ATTGTTTGGTTGCATTGGAT+GGG | + | chr1_4:11408110-11408129 | None:intergenic | 35.0% | |
| GAAGTTGTTCTTCTGTTGTT+GGG | + | chr1_4:11408202-11408221 | None:intergenic | 35.0% | |
| !!! | TTGTGACAATTTTGGCCTTA+AGG | + | chr1_4:11408256-11408275 | None:intergenic | 35.0% |
| ! | TTGACTGTAACAGTTGATTC+AGG | - | chr1_4:11408386-11408405 | Msa0150150:CDS | 35.0% |
| ATTGTAACACCTTCCCAATA+AGG | + | chr1_4:11408473-11408492 | None:intergenic | 35.0% | |
| !! | TATTGGGAAGGTGTTACAAT+TGG | - | chr1_4:11408473-11408492 | Msa0150150:CDS | 35.0% |
| !! | ATTGGAGGTGTTATTAGTAC+TGG | - | chr1_4:11408491-11408510 | Msa0150150:CDS | 35.0% |
| !! | TTCCTAGTTCTGAATCTGAA+GGG | - | chr1_4:11408585-11408604 | Msa0150150:CDS | 35.0% |
| TGATTCCAACCTCAAAACTT+TGG | + | chr1_4:11408615-11408634 | None:intergenic | 35.0% | |
| ACTTGTGCAGCATTAAACAA+AGG | + | chr1_4:11408644-11408663 | None:intergenic | 35.0% | |
| ! | ACAAGTTTCTCTTGGAGTTT+TGG | - | chr1_4:11408658-11408677 | Msa0150150:CDS | 35.0% |
| ! | CAAGTTTCTCTTGGAGTTTT+GGG | - | chr1_4:11408659-11408678 | Msa0150150:CDS | 35.0% |
| ! | TTTGATTTCTTGTCTGGCAA+AGG | - | chr1_4:11408983-11409002 | Msa0150150:intron | 35.0% |
| TTCAATTTCTCATCCTCGTT+GGG | + | chr1_4:11409411-11409430 | None:intergenic | 35.0% | |
| ATTCAATTTCTCATCCTCGT+TGG | + | chr1_4:11409412-11409431 | None:intergenic | 35.0% | |
| AAATTATTCAATGCGGGGAT+GGG | + | chr1_4:11409477-11409496 | None:intergenic | 35.0% | |
| AAAATTATTCAATGCGGGGA+TGG | + | chr1_4:11409478-11409497 | None:intergenic | 35.0% | |
| GTATTACAACGTTGCTCTTT+GGG | + | chr1_4:11409532-11409551 | None:intergenic | 35.0% | |
| TGTATTACAACGTTGCTCTT+TGG | + | chr1_4:11409533-11409552 | None:intergenic | 35.0% | |
| TGTTAAAGTGAGCGTATTGT+TGG | + | chr1_4:11409560-11409579 | None:intergenic | 35.0% | |
| CTGATTTCAAAACACGTGTA+TGG | + | chr1_4:11409753-11409772 | None:intergenic | 35.0% | |
| !!! | CATACACGTGTTTTGAAATC+AGG | - | chr1_4:11409751-11409770 | Msa0150150:intron | 35.0% |
| !! | TTTTGATTGGGTTTGGGTAT+GGG | + | chr1_4:11409788-11409807 | None:intergenic | 35.0% |
| !!! | ATTTTGATTGGGTTTGGGTA+TGG | + | chr1_4:11409789-11409808 | None:intergenic | 35.0% |
| ATACCCAAACCCAATCAAAA+TGG | - | chr1_4:11409788-11409807 | Msa0150150:intron | 35.0% | |
| TACCCAAACCCAATCAAAAT+GGG | - | chr1_4:11409789-11409808 | Msa0150150:intron | 35.0% | |
| GAACTAATCGATCATTAGGT+TGG | + | chr1_4:11409922-11409941 | None:intergenic | 35.0% | |
| CTTCGAACTAATCGATCATT+AGG | + | chr1_4:11409926-11409945 | None:intergenic | 35.0% | |
| GAATGAGATATGAACCAACT+TGG | + | chr1_4:11410031-11410050 | None:intergenic | 35.0% | |
| GCCGAATTCCGAATTATTAA+GGG | + | chr1_4:11410397-11410416 | None:intergenic | 35.0% | |
| ACTTTGTCTTCTCAAATTGG+TGG | + | chr1_4:11410500-11410519 | None:intergenic | 35.0% | |
| !! | AACTGTTTGGTGTATTTGGT+TGG | + | chr1_4:11410634-11410653 | None:intergenic | 35.0% |
| TCGCTTTGTAAAGGAAAGAA+TGG | + | chr1_4:11410687-11410706 | None:intergenic | 35.0% | |
| !! | ATTGGAAAGCATTTGATTGG+TGG | + | chr1_4:11410743-11410762 | None:intergenic | 35.0% |
| GCAGAAAGACTCAAAAAGTA+TGG | + | chr1_4:11410788-11410807 | None:intergenic | 35.0% | |
| TTCCAATTCGGGTAGAATTA+TGG | + | chr1_4:11410900-11410919 | None:intergenic | 35.0% | |
| TTCAGAATAGGCTTCCAATT+CGG | + | chr1_4:11410912-11410931 | None:intergenic | 35.0% | |
| GAGACTATACTGTAAAGGAT+TGG | - | chr1_4:11411268-11411287 | Msa0150150:intron | 35.0% | |
| TATGGTTAGACTCAATTTGG+TGG | + | chr1_4:11411425-11411444 | None:intergenic | 35.0% | |
| GGTTATGGTTAGACTCAATT+TGG | + | chr1_4:11411428-11411447 | None:intergenic | 35.0% | |
| GAAAAAATGCTCTGATTGGA+AGG | + | chr1_4:11411465-11411484 | None:intergenic | 35.0% | |
| !!! | TCCAATCAGAGCATTTTTTC+TGG | - | chr1_4:11411465-11411484 | Msa0150150:intron | 35.0% |
| TCCAGAAAAAATGCTCTGAT+TGG | + | chr1_4:11411469-11411488 | None:intergenic | 35.0% | |
| !!! | AGAGCATTTTTTCTGGAACT+GGG | - | chr1_4:11411472-11411491 | Msa0150150:intron | 35.0% |
| ! | CATTGTCAACACCATTTTGA+TGG | - | chr1_4:11411674-11411693 | Msa0150150:intron | 35.0% |
| !! | CAACACCATTTTGATGGAAA+TGG | - | chr1_4:11411680-11411699 | Msa0150150:intron | 35.0% |
| !! | AAATGGATTGACTACCTTTG+TGG | - | chr1_4:11411697-11411716 | Msa0150150:intron | 35.0% |
| ! | AAGTAACTTCTTCGGTGTAA+AGG | + | chr1_4:11411942-11411961 | None:intergenic | 35.0% |
| ! | TAATTTTTCACCTCTTAGGG+AGG | - | chr1_4:11411990-11412009 | Msa0150150:intron | 35.0% |
| ! | AATTTTTCACCTCTTAGGGA+GGG | - | chr1_4:11411991-11412010 | Msa0150150:intron | 35.0% |
| TGAAGTTATCACTTGAGCAT+AGG | - | chr1_4:11412071-11412090 | Msa0150150:intron | 35.0% | |
| !! | ATGAGTTTGCTGACATAACT+TGG | - | chr1_4:11412170-11412189 | Msa0150150:intron | 35.0% |
| ACATAACTTGGTATCCATCA+AGG | - | chr1_4:11412182-11412201 | Msa0150150:intron | 35.0% | |
| GATGGAGTCTATGATTTCAT+TGG | - | chr1_4:11412256-11412275 | Msa0150150:intron | 35.0% | |
| ! | CATTTTACAATTGTCTTCGG+AGG | - | chr1_4:11412528-11412547 | Msa0150150:intron | 35.0% |
| TGACTTTATAACTTCAAGGG+AGG | + | chr1_4:11412565-11412584 | None:intergenic | 35.0% | |
| TAAATTGCAGATGTGCAGTT+AGG | + | chr1_4:11412726-11412745 | None:intergenic | 35.0% | |
| TTAACAGCATCCACTACATT+GGG | - | chr1_4:11412848-11412867 | Msa0150150:intron | 35.0% | |
| TTTCTTGAATCCCAATGTAG+TGG | + | chr1_4:11412861-11412880 | None:intergenic | 35.0% | |
| TTCACCAGATATCCTGTAAT+TGG | - | chr1_4:11412917-11412936 | Msa0150150:intron | 35.0% | |
| CAAGGAAAAATGCAAACTTC+AGG | - | chr1_4:11412944-11412963 | Msa0150150:intron | 35.0% | |
| AATAGACACATCATGTGCAT+GGG | - | chr1_4:11412988-11413007 | Msa0150150:intron | 35.0% | |
| TGTGGCATAGACATCTATAA+TGG | - | chr1_4:11413127-11413146 | Msa0150150:CDS | 35.0% | |
| GGTTTAGTCTAGGAGTAAAT+TGG | + | chr1_4:11413246-11413265 | None:intergenic | 35.0% | |
| TAGACTAAACCAAGATGTGT+GGG | - | chr1_4:11413255-11413274 | Msa0150150:CDS | 35.0% | |
| ! | TGGTCAGATGAGATTTTGTA+TGG | - | chr1_4:11413439-11413458 | Msa0150150:CDS | 35.0% |
| ! | GGTCAGATGAGATTTTGTAT+GGG | - | chr1_4:11413440-11413459 | Msa0150150:CDS | 35.0% |
| ! | AGATGAGATTTTGTATGGGA+AGG | - | chr1_4:11413444-11413463 | Msa0150150:CDS | 35.0% |
| ! | GATTTTGTATGGGAAGGAAT+TGG | - | chr1_4:11413450-11413469 | Msa0150150:CDS | 35.0% |
| ! | AAAATTTGATGGCTGTGCTT+TGG | - | chr1_4:11413474-11413493 | Msa0150150:CDS | 35.0% |
| AGACATTGTAGTCCTCAAAA+AGG | - | chr1_4:11413523-11413542 | Msa0150150:CDS | 35.0% | |
| GACATTGTAGTCCTCAAAAA+GGG | - | chr1_4:11413524-11413543 | Msa0150150:CDS | 35.0% | |
| ACAAGGAAGCTAAAGTTTGT+AGG | - | chr1_4:11413572-11413591 | Msa0150150:CDS | 35.0% | |
| GTGATAAAGGCAACATTGAT+AGG | + | chr1_4:11413736-11413755 | None:intergenic | 35.0% | |
| ! | ACGTGATAAAGGTGTGATAA+AGG | + | chr1_4:11413749-11413768 | None:intergenic | 35.0% |
| ! | TGGTGATGATTGTGGTGAAA+GGG | + | chr1_4:11407981-11408000 | None:intergenic | 40.0% |
| TTACTACCTATTGGATGTGG+TGG | - | chr1_4:11408009-11408028 | Msa0150150:three_prime_UTR | 40.0% | |
| GAGATTGTGGAGTTATGCTA+TGG | + | chr1_4:11408088-11408107 | None:intergenic | 40.0% | |
| GATTGTTTGGTTGCATTGGA+TGG | + | chr1_4:11408111-11408130 | None:intergenic | 40.0% | |
| TGCAGATTGTTTGGTTGCAT+TGG | + | chr1_4:11408115-11408134 | None:intergenic | 40.0% | |
| ! | TTTGAAGGGTGCAGATTGTT+TGG | + | chr1_4:11408124-11408143 | None:intergenic | 40.0% |
| ! | TTAGGGCATAGCAACTTTTG+CGG | + | chr1_4:11408169-11408188 | None:intergenic | 40.0% |
| CGAAGTTGTTCTTCTGTTGT+TGG | + | chr1_4:11408203-11408222 | None:intergenic | 40.0% | |
| ! | GTTGTGGGCATGATAGTTTT+GGG | + | chr1_4:11408295-11408314 | None:intergenic | 40.0% |
| ! | TGTTGTGGGCATGATAGTTT+TGG | + | chr1_4:11408296-11408315 | None:intergenic | 40.0% |
| !! | GTTATTAGTACTGGTGCACA+TGG | - | chr1_4:11408500-11408519 | Msa0150150:CDS | 40.0% |
| !! | GTTCCTAGTTCTGAATCTGA+AGG | - | chr1_4:11408584-11408603 | Msa0150150:CDS | 40.0% |
| TACCCTTCAGATTCAGAACT+AGG | + | chr1_4:11408590-11408609 | None:intergenic | 40.0% | |
| !! | AAGGGTATGCCAAAGTTTTG+AGG | - | chr1_4:11408603-11408622 | Msa0150150:CDS | 40.0% |
| !!! | GTATGCCAAAGTTTTGAGGT+TGG | - | chr1_4:11408607-11408626 | Msa0150150:CDS | 40.0% |
| AATGCTGCACAAGTTTCTCT+TGG | - | chr1_4:11408650-11408669 | Msa0150150:CDS | 40.0% | |
| CAATGACTTATATCTAGCCG+TGG | - | chr1_4:11409303-11409322 | Msa0150150:intron | 40.0% | |
| TTATATCTAGCCGTGGCAAT+GGG | - | chr1_4:11409310-11409329 | Msa0150150:intron | 40.0% | |
| AATTATTCAATGCGGGGATG+GGG | + | chr1_4:11409476-11409495 | None:intergenic | 40.0% | |
| !! | TTTTACATTTGGGACGGGTT+TGG | - | chr1_4:11409686-11409705 | Msa0150150:intron | 40.0% |
| ! | TTTACATTTGGGACGGGTTT+GGG | - | chr1_4:11409687-11409706 | Msa0150150:intron | 40.0% |
| TTCAAAACACGTGTATGGGA+CGG | + | chr1_4:11409748-11409767 | None:intergenic | 40.0% | |
| ACCCAAACCCAATCAAAATG+GGG | - | chr1_4:11409790-11409809 | Msa0150150:intron | 40.0% | |
| !!! | TCCCCATTTTGATTGGGTTT+GGG | + | chr1_4:11409794-11409813 | None:intergenic | 40.0% |
| !!! | TTCCCCATTTTGATTGGGTT+TGG | + | chr1_4:11409795-11409814 | None:intergenic | 40.0% |
| !!! | GGGTTTTCCCCATTTTGATT+GGG | + | chr1_4:11409800-11409819 | None:intergenic | 40.0% |
| AAAACCCGTCAAATTGGGTT+TGG | - | chr1_4:11409813-11409832 | Msa0150150:intron | 40.0% | |
| TACCTTTAGACCATCCAAGT+TGG | - | chr1_4:11410014-11410033 | Msa0150150:intron | 40.0% | |
| AACCAACTTGGATGGTCTAA+AGG | + | chr1_4:11410019-11410038 | None:intergenic | 40.0% | |
| GAGATATGAACCAACTTGGA+TGG | + | chr1_4:11410027-11410046 | None:intergenic | 40.0% | |
| TCAACTGAGCTAAACTTACG+AGG | + | chr1_4:11410258-11410277 | None:intergenic | 40.0% | |
| ! | TCTTTCTCTAAGGAACCTGA+AGG | + | chr1_4:11410373-11410392 | None:intergenic | 40.0% |
| GGCCGAATTCCGAATTATTA+AGG | + | chr1_4:11410398-11410417 | None:intergenic | 40.0% | |
| !! | GCTACAAAAGCATTGCGAAA+CGG | - | chr1_4:11410468-11410487 | Msa0150150:intron | 40.0% |
| TTGTCTTCTCAAATTGGTGG+AGG | + | chr1_4:11410497-11410516 | None:intergenic | 40.0% | |
| AGCTGCCAATGTTCATGAAA+TGG | + | chr1_4:11410583-11410602 | None:intergenic | 40.0% | |
| CAATTCGGGTAGAATTATGG+AGG | + | chr1_4:11410897-11410916 | None:intergenic | 40.0% | |
| CTCCATAATTCTACCCGAAT+TGG | - | chr1_4:11410895-11410914 | Msa0150150:intron | 40.0% | |
| TCAGAATAGGCTTCCAATTC+GGG | + | chr1_4:11410911-11410930 | None:intergenic | 40.0% | |
| ! | ATTTTGTCCAGTTGCAGGAA+GGG | + | chr1_4:11411123-11411142 | None:intergenic | 40.0% |
| ! | AATTTTGTCCAGTTGCAGGA+AGG | + | chr1_4:11411124-11411143 | None:intergenic | 40.0% |
| ! | TCTGAATTTTGTCCAGTTGC+AGG | + | chr1_4:11411128-11411147 | None:intergenic | 40.0% |
| ! | AATTTTGTCCAGTGAGGAAG+AGG | + | chr1_4:11411173-11411192 | None:intergenic | 40.0% |
| ATGCAGAAATTTACTGCAGC+TGG | + | chr1_4:11411229-11411248 | None:intergenic | 40.0% | |
| TACAGTATAGTCTCCGACAA+AGG | + | chr1_4:11411262-11411281 | None:intergenic | 40.0% | |
| TGTCGGAGACTATACTGTAA+AGG | - | chr1_4:11411263-11411282 | Msa0150150:intron | 40.0% | |
| CATTATTCTTGCAAGACCTC+TGG | + | chr1_4:11411324-11411343 | None:intergenic | 40.0% | |
| GAGGTCTTGCAAGAATAATG+TGG | - | chr1_4:11411324-11411343 | Msa0150150:intron | 40.0% | |
| AAAGCAGTCAGAAGAGTAGT+TGG | + | chr1_4:11411356-11411375 | None:intergenic | 40.0% | |
| CGTCGGAGGTAGAATAAAAT+TGG | + | chr1_4:11411385-11411404 | None:intergenic | 40.0% | |
| GGATGAATACGGTAAGGTTA+TGG | + | chr1_4:11411443-11411462 | None:intergenic | 40.0% | |
| CTGATTGGAAGGGATGAATA+CGG | + | chr1_4:11411454-11411473 | None:intergenic | 40.0% | |
| !!! | CAGAGCATTTTTTCTGGAAC+TGG | - | chr1_4:11411471-11411490 | Msa0150150:intron | 40.0% |
| GATGACAATGCAATTTGGTC+AGG | + | chr1_4:11411519-11411538 | None:intergenic | 40.0% | |
| GCATTTAATGATCTCTTGGC+TGG | + | chr1_4:11411592-11411611 | None:intergenic | 40.0% | |
| CCGAAGAATACACTAAACTG+CGG | + | chr1_4:11411734-11411753 | None:intergenic | 40.0% | |
| CCGCAGTTTAGTGTATTCTT+CGG | - | chr1_4:11411731-11411750 | Msa0150150:intron | 40.0% | |
| CTGAGAGACCAGTATTTCAT+TGG | + | chr1_4:11412290-11412309 | None:intergenic | 40.0% | |
| !!! | AAGGTTTTGTTACTGGCTTG+TGG | - | chr1_4:11412408-11412427 | Msa0150150:intron | 40.0% |
| ! | GAAGGTACAATATGACAGTG+AGG | + | chr1_4:11412435-11412454 | None:intergenic | 40.0% |
| ! | TGCAGTTAGGTCGCAATTTT+TGG | + | chr1_4:11412713-11412732 | None:intergenic | 40.0% |
| ACTTCAATGTTGTCATGCAG+AGG | - | chr1_4:11412787-11412806 | Msa0150150:intron | 40.0% | |
| GAAAACACAGGAAACACGAA+CGG | - | chr1_4:11412818-11412837 | Msa0150150:intron | 40.0% | |
| AAAACACAGGAAACACGAAC+GGG | - | chr1_4:11412819-11412838 | Msa0150150:intron | 40.0% | |
| CTTAACAGCATCCACTACAT+TGG | - | chr1_4:11412847-11412866 | Msa0150150:intron | 40.0% | |
| GCCAATGGTTTGAAGAACAA+TGG | - | chr1_4:11412887-11412906 | Msa0150150:intron | 40.0% | |
| GCCATTGTTCTTCAAACCAT+TGG | + | chr1_4:11412891-11412910 | None:intergenic | 40.0% | |
| CAGGATATCTGGTGAAGATT+AGG | + | chr1_4:11412913-11412932 | None:intergenic | 40.0% | |
| GAATAGACACATCATGTGCA+TGG | - | chr1_4:11412987-11413006 | Msa0150150:intron | 40.0% | |
| GCATGGGATCCAAGAATAAA+AGG | - | chr1_4:11413004-11413023 | Msa0150150:intron | 40.0% | |
| ! | AAAGCCTCAGAAGCATATCT+AGG | - | chr1_4:11413169-11413188 | Msa0150150:CDS | 40.0% |
| TTGTCCTAGATATGCTTCTG+AGG | + | chr1_4:11413176-11413195 | None:intergenic | 40.0% | |
| ! | TCTAGGACAATCAGAAGACT+CGG | - | chr1_4:11413186-11413205 | Msa0150150:CDS | 40.0% |
| CACACATCTTGGTTTAGTCT+AGG | + | chr1_4:11413256-11413275 | None:intergenic | 40.0% | |
| CTAGACTAAACCAAGATGTG+TGG | - | chr1_4:11413254-11413273 | Msa0150150:CDS | 40.0% | |
| TTCCTATTCTTAGCCCAATG+TGG | + | chr1_4:11413322-11413341 | None:intergenic | 40.0% | |
| AAGATGTGTTCTCTGGTGAT+TGG | - | chr1_4:11413419-11413438 | Msa0150150:CDS | 40.0% | |
| TAGTCATGGACTTGTCTACA+AGG | - | chr1_4:11413555-11413574 | Msa0150150:CDS | 40.0% | |
| AAAGGCAACATTGATAGGGA+CGG | + | chr1_4:11413731-11413750 | None:intergenic | 40.0% | |
| AAAGCGAACACACGTGATAA+AGG | + | chr1_4:11413760-11413779 | None:intergenic | 40.0% | |
| ! | GTGGTGATGATTGTGGTGAA+AGG | + | chr1_4:11407982-11408001 | None:intergenic | 45.0% |
| TCACCACAATCATCACCACA+TGG | - | chr1_4:11407983-11408002 | Msa0150150:three_prime_UTR | 45.0% | |
| ! | AAGCCATGTGGTGATGATTG+TGG | + | chr1_4:11407989-11408008 | None:intergenic | 45.0% |
| ! | GGGTTTGGTCCTATGAATAG+TGG | + | chr1_4:11408059-11408078 | None:intergenic | 45.0% |
| TTGCATTGGATGGGAGATTG+TGG | + | chr1_4:11408101-11408120 | None:intergenic | 45.0% | |
| TGCACCCTTCAAAACTCGTA+CGG | - | chr1_4:11408131-11408150 | Msa0150150:CDS | 45.0% | |
| !!! | TGTGCCGTACGAGTTTTGAA+GGG | + | chr1_4:11408138-11408157 | None:intergenic | 45.0% |
| !! | ATGTGCCGTACGAGTTTTGA+AGG | + | chr1_4:11408139-11408158 | None:intergenic | 45.0% |
| TTCAAAACTCGTACGGCACA+TGG | - | chr1_4:11408138-11408157 | Msa0150150:CDS | 45.0% | |
| ! | TTTGGTGGCTGCACCTTATT+GGG | - | chr1_4:11408457-11408476 | Msa0150150:CDS | 45.0% |
| !! | TGGGAAGGTGTTACAATTGG+AGG | - | chr1_4:11408476-11408495 | Msa0150150:CDS | 45.0% |
| TGCACATGGTAGTTCTTGGT+GGG | - | chr1_4:11408514-11408533 | Msa0150150:CDS | 45.0% | |
| CTTATATCTAGCCGTGGCAA+TGG | - | chr1_4:11409309-11409328 | Msa0150150:intron | 45.0% | |
| TATATCTAGCCGTGGCAATG+GGG | - | chr1_4:11409311-11409330 | Msa0150150:intron | 45.0% | |
| TAGAATCGGGTATGGGAATG+AGG | + | chr1_4:11409361-11409380 | None:intergenic | 45.0% | |
| TTCTCATCCTCGTTGGGTAT+GGG | + | chr1_4:11409405-11409424 | None:intergenic | 45.0% | |
| TTTCTCATCCTCGTTGGGTA+TGG | + | chr1_4:11409406-11409425 | None:intergenic | 45.0% | |
| TCAAAACACGTGTATGGGAC+GGG | + | chr1_4:11409747-11409766 | None:intergenic | 45.0% | |
| TTGGGTTTGGGTATGGGTAT+GGG | + | chr1_4:11409782-11409801 | None:intergenic | 45.0% | |
| ATTGGGTTTGGGTATGGGTA+TGG | + | chr1_4:11409783-11409802 | None:intergenic | 45.0% | |
| !! | CGGGTTTTCCCCATTTTGAT+TGG | + | chr1_4:11409801-11409820 | None:intergenic | 45.0% |
| ATGGGGAAAACCCGTCAAAT+TGG | - | chr1_4:11409807-11409826 | Msa0150150:intron | 45.0% | |
| TGGGGAAAACCCGTCAAATT+GGG | - | chr1_4:11409808-11409827 | Msa0150150:intron | 45.0% | |
| CGAACCAAACCCAATTTGAC+GGG | + | chr1_4:11409820-11409839 | None:intergenic | 45.0% | |
| CCGAACCAAACCCAATTTGA+CGG | + | chr1_4:11409821-11409840 | None:intergenic | 45.0% | |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | - | chr1_4:11409818-11409837 | Msa0150150:intron | 45.0% |
| !! | CAAATTGGGTTTGGTTCGGA+CGG | - | chr1_4:11409822-11409841 | Msa0150150:intron | 45.0% |
| !! | AAATTGGGTTTGGTTCGGAC+GGG | - | chr1_4:11409823-11409842 | Msa0150150:intron | 45.0% |
| ACGCAAATGAACGGTGGAAT+TGG | + | chr1_4:11409952-11409971 | None:intergenic | 45.0% | |
| AATTCCACCGTTCATTTGCG+TGG | - | chr1_4:11409951-11409970 | Msa0150150:intron | 45.0% | |
| ATGGAGTCCACGCAAATGAA+CGG | + | chr1_4:11409961-11409980 | None:intergenic | 45.0% | |
| TATGGAGGTGAGGAGTTACT+CGG | + | chr1_4:11410882-11410901 | None:intergenic | 45.0% | |
| AGATGTGGTCAAGTAGCTTC+TGG | + | chr1_4:11411095-11411114 | None:intergenic | 45.0% | |
| ! | TTTTGTCCAGTTGCAGGAAG+GGG | + | chr1_4:11411122-11411141 | None:intergenic | 45.0% |
| ! | GTGCAGAATTTTGTCCAGTG+AGG | + | chr1_4:11411179-11411198 | None:intergenic | 45.0% |
| TTCTTGCAAGACCTCTGGTT+TGG | + | chr1_4:11411319-11411338 | None:intergenic | 45.0% | |
| GTCAGAAGAGTAGTTGGAGA+CGG | + | chr1_4:11411350-11411369 | None:intergenic | 45.0% | |
| TGGAAGGGATGAATACGGTA+AGG | + | chr1_4:11411449-11411468 | None:intergenic | 45.0% | |
| TGGATTGACTACCTTTGTGG+CGG | - | chr1_4:11411700-11411719 | Msa0150150:intron | 45.0% | |
| TAAACAGCTGTGTGCCTTGA+TGG | + | chr1_4:11412199-11412218 | None:intergenic | 45.0% | |
| ATCATAGACTCCATCACCAG+AGG | + | chr1_4:11412251-11412270 | None:intergenic | 45.0% | |
| ACTACTGAGCCGAGATCTTA+TGG | - | chr1_4:11412592-11412611 | Msa0150150:intron | 45.0% | |
| TTGTCATGCAGAGGAATTGC+TGG | - | chr1_4:11412796-11412815 | Msa0150150:intron | 45.0% | |
| GAGGAATTGCTGGAAAACAC+AGG | - | chr1_4:11412806-11412825 | Msa0150150:intron | 45.0% | |
| ACTAAACCAAGATGTGTGGG+AGG | - | chr1_4:11413258-11413277 | Msa0150150:CDS | 45.0% | |
| ! | AGTATGGTGCTAAGCCACAT+TGG | - | chr1_4:11413305-11413324 | Msa0150150:CDS | 45.0% |
| ! | GTATGGTGCTAAGCCACATT+GGG | - | chr1_4:11413306-11413325 | Msa0150150:CDS | 45.0% |
| AGCCACATTGGGCTAAGAAT+AGG | - | chr1_4:11413317-11413336 | Msa0150150:CDS | 45.0% | |
| GATCCACAAGATGTGTTCTC+TGG | - | chr1_4:11413412-11413431 | Msa0150150:CDS | 45.0% | |
| TCACCAGAGAACACATCTTG+TGG | + | chr1_4:11413418-11413437 | None:intergenic | 45.0% | |
| ! | TTTGATGGCTGTGCTTTGGA+AGG | - | chr1_4:11413478-11413497 | Msa0150150:CDS | 45.0% |
| !!! | TTTTAAATTTTATAAAGTTT+TGG | + | chr1_4:11411541-11411560 | None:intergenic | 5.0% |
| ! | GTTTGGTGGCTGCACCTTAT+TGG | - | chr1_4:11408456-11408475 | Msa0150150:CDS | 50.0% |
| CTGGTGCACATGGTAGTTCT+TGG | - | chr1_4:11408510-11408529 | Msa0150150:CDS | 50.0% | |
| GTGCACATGGTAGTTCTTGG+TGG | - | chr1_4:11408513-11408532 | Msa0150150:CDS | 50.0% | |
| GCACATGGTAGTTCTTGGTG+GGG | - | chr1_4:11408515-11408534 | Msa0150150:CDS | 50.0% | |
| !!! | AGTTTTGGGTGCCATCTCCA+AGG | - | chr1_4:11408673-11408692 | Msa0150150:CDS | 50.0% |
| ATCGGGTATGGGAATGAGGA+AGG | + | chr1_4:11409357-11409376 | None:intergenic | 50.0% | |
| ATCCTCGTTGGGTATGGGTA+GGG | + | chr1_4:11409400-11409419 | None:intergenic | 50.0% | |
| ! | ATTTGGGACGGGTTTGGGTA+TGG | - | chr1_4:11409692-11409711 | Msa0150150:intron | 50.0% |
| ! | TTTGGGACGGGTTTGGGTAT+GGG | - | chr1_4:11409693-11409712 | Msa0150150:intron | 50.0% |
| TTTGGGTATGGGTTCAGGGT+GGG | - | chr1_4:11409704-11409723 | Msa0150150:intron | 50.0% | |
| GGGACGGGTAACAGGTATAT+AGG | + | chr1_4:11409732-11409751 | None:intergenic | 50.0% | |
| CGGGTAGAATTATGGAGGTG+AGG | + | chr1_4:11410892-11410911 | None:intergenic | 50.0% | |
| GGACGAAGGCAAAGGATTCT+CGG | + | chr1_4:11411074-11411093 | None:intergenic | 50.0% | |
| TAGCTTCTGGACGAAGGCAA+AGG | + | chr1_4:11411082-11411101 | None:intergenic | 50.0% | |
| GTCAAGTAGCTTCTGGACGA+AGG | + | chr1_4:11411088-11411107 | None:intergenic | 50.0% | |
| GATTCACTCCTCTTCCTCAC+TGG | - | chr1_4:11411162-11411181 | Msa0150150:intron | 50.0% | |
| CAGCTGGTACACAGCAGAAA+TGG | + | chr1_4:11411213-11411232 | None:intergenic | 50.0% | |
| CATGAGTGATGCGCCTTTGT+CGG | - | chr1_4:11411246-11411265 | Msa0150150:intron | 50.0% | |
| ! | TCGGTTGCTTTCCAAACCAG+AGG | - | chr1_4:11411305-11411324 | Msa0150150:intron | 50.0% |
| !! | CAATTTGGTGGTGCTCCGAT+TGG | + | chr1_4:11411413-11411432 | None:intergenic | 50.0% |
| GGATTGACTACCTTTGTGGC+GGG | - | chr1_4:11411701-11411720 | Msa0150150:intron | 50.0% | |
| !! | CCATCACCAGAGGCATCTAA+GGG | + | chr1_4:11412241-11412260 | None:intergenic | 50.0% |
| !! | TCCATCACCAGAGGCATCTA+AGG | + | chr1_4:11412242-11412261 | None:intergenic | 50.0% |
| TCTCAGTCAGTTAGAGCAGC+AGG | - | chr1_4:11412304-11412323 | Msa0150150:intron | 50.0% | |
| CCAATTCCTCCCACACATCT+TGG | + | chr1_4:11413267-11413286 | None:intergenic | 50.0% | |
| CCAAGATGTGTGGGAGGAAT+TGG | - | chr1_4:11413264-11413283 | Msa0150150:CDS | 50.0% | |
| GTGGCTGCACCTTATTGGGA+AGG | - | chr1_4:11408461-11408480 | Msa0150150:CDS | 55.0% | |
| GGTAGTTCTTGGTGGGGCAA+AGG | - | chr1_4:11408521-11408540 | Msa0150150:CDS | 55.0% | |
| AGTTCTTGGTGGGGCAAAGG+TGG | - | chr1_4:11408524-11408543 | Msa0150150:CDS | 55.0% | |
| TACCCTACCCATACCCAACG+AGG | - | chr1_4:11409395-11409414 | Msa0150150:intron | 55.0% | |
| CATCCTCGTTGGGTATGGGT+AGG | + | chr1_4:11409401-11409420 | None:intergenic | 55.0% | |
| AATCTCATCCCCGTCCCTGA+CGG | - | chr1_4:11409429-11409448 | Msa0150150:CDS | 55.0% | |
| TTCAATGCGGGGATGGGGAT+GGG | + | chr1_4:11409471-11409490 | None:intergenic | 55.0% | |
| ATTCAATGCGGGGATGGGGA+TGG | + | chr1_4:11409472-11409491 | None:intergenic | 55.0% | |
| ACGGGTTTGGGTATGGGTTC+AGG | - | chr1_4:11409699-11409718 | Msa0150150:intron | 55.0% | |
| CGGGTTTGGGTATGGGTTCA+GGG | - | chr1_4:11409700-11409719 | Msa0150150:intron | 55.0% | |
| GTTTGGGTATGGGTTCAGGG+TGG | - | chr1_4:11409703-11409722 | Msa0150150:intron | 55.0% | |
| ACGTGTATGGGACGGGTAAC+AGG | + | chr1_4:11409740-11409759 | None:intergenic | 55.0% | |
| ! | TGGTTCGGACGGGTAACTGT+CGG | - | chr1_4:11409833-11409852 | Msa0150150:intron | 55.0% |
| GAGTCCACGCAAATGAACGG+TGG | + | chr1_4:11409958-11409977 | None:intergenic | 55.0% | |
| TACAGCAGCTCGGCGTTTGT+GGG | + | chr1_4:11410980-11410999 | None:intergenic | 55.0% | |
| TTACAGCAGCTCGGCGTTTG+TGG | + | chr1_4:11410981-11411000 | None:intergenic | 55.0% | |
| !! | AGCAGAAATGGCGCTGGTTC+TGG | + | chr1_4:11411201-11411220 | None:intergenic | 55.0% |
| GTACACAGCAGAAATGGCGC+TGG | + | chr1_4:11411207-11411226 | None:intergenic | 55.0% | |
| ! | TGGTGGTGCTCCGATTGGAA+GGG | + | chr1_4:11411408-11411427 | None:intergenic | 55.0% |
| !! | TTGGTGGTGCTCCGATTGGA+AGG | + | chr1_4:11411409-11411428 | None:intergenic | 55.0% |
| TGCTAGCATCCCTCCCTAAG+AGG | + | chr1_4:11412003-11412022 | None:intergenic | 55.0% | |
| AGGGTTCCCTTAGATGCCTC+TGG | - | chr1_4:11412232-11412251 | Msa0150150:intron | 55.0% | |
| CCCTTAGATGCCTCTGGTGA+TGG | - | chr1_4:11412238-11412257 | Msa0150150:intron | 55.0% | |
| ATCTAGCCGTGGCAATGGGG+CGG | - | chr1_4:11409314-11409333 | Msa0150150:intron | 60.0% | |
| ATCTCATCCCCGTCCCTGAC+GGG | - | chr1_4:11409430-11409449 | Msa0150150:CDS | 60.0% | |
| ATACCCGAACCCGTCAGGGA+CGG | + | chr1_4:11409442-11409461 | None:intergenic | 60.0% | |
| TCAATGCGGGGATGGGGATG+GGG | + | chr1_4:11409470-11409489 | None:intergenic | 60.0% | |
| CGGACGGGTAACTGTCGGTA+TGG | - | chr1_4:11409838-11409857 | Msa0150150:intron | 60.0% | |
| GCAGGAAGGGGTGACAGATG+TGG | + | chr1_4:11411110-11411129 | None:intergenic | 60.0% | |
| CTGTCACCCCTTCCTGCAAC+TGG | - | chr1_4:11411113-11411132 | Msa0150150:intron | 60.0% | |
| ACCTCCGACGCCCTTCCAAT+CGG | - | chr1_4:11411395-11411414 | Msa0150150:intron | 60.0% | |
| ! | TGCTCCGATTGGAAGGGCGT+CGG | + | chr1_4:11411402-11411421 | None:intergenic | 60.0% |
| CGGTGACTTTCCCGCCACAA+AGG | + | chr1_4:11411714-11411733 | None:intergenic | 60.0% | |
| TCTAGCCGTGGCAATGGGGC+GGG | - | chr1_4:11409315-11409334 | Msa0150150:intron | 65.0% | |
| !! | ATCCCCGTCCCTGACGGGTT+CGG | - | chr1_4:11409435-11409454 | Msa0150150:CDS | 65.0% |
| TACCCGAACCCGTCAGGGAC+GGG | + | chr1_4:11409441-11409460 | None:intergenic | 65.0% | |
| GGGGATACCCGAACCCGTCA+GGG | + | chr1_4:11409446-11409465 | None:intergenic | 65.0% | |
| !! | TCCGATTGGAAGGGCGTCGG+AGG | + | chr1_4:11411399-11411418 | None:intergenic | 65.0% |
| CTAGCCGTGGCAATGGGGCG+GGG | - | chr1_4:11409316-11409335 | Msa0150150:intron | 70.0% | |
| !! | TCCCCGTCCCTGACGGGTTC+GGG | - | chr1_4:11409436-11409455 | Msa0150150:CDS | 70.0% |
| ACCCGAACCCGTCAGGGACG+GGG | + | chr1_4:11409440-11409459 | None:intergenic | 70.0% | |
| CGGGGATACCCGAACCCGTC+AGG | + | chr1_4:11409447-11409466 | None:intergenic | 70.0% | |
| ATGCGGGGATGGGGATGGGG+CGG | + | chr1_4:11409467-11409486 | None:intergenic | 70.0% | |
| CCCACCCCGCCCCATTGCCA+CGG | + | chr1_4:11409323-11409342 | None:intergenic | 75.0% | |
| CCGTGGCAATGGGGCGGGGT+GGG | - | chr1_4:11409320-11409339 | Msa0150150:intron | 75.0% | |
| CGTGGCAATGGGGCGGGGTG+GGG | - | chr1_4:11409321-11409340 | Msa0150150:intron | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | - | chr1_4:11409325-11409344 | Msa0150150:intron | 75.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | - | chr1_4:11409326-11409345 | Msa0150150:intron | 75.0% | |
| TGCGGGGATGGGGATGGGGC+GGG | + | chr1_4:11409466-11409485 | None:intergenic | 75.0% | |
| ! | GCCGTGGCAATGGGGCGGGG+TGG | - | chr1_4:11409319-11409338 | Msa0150150:intron | 80.0% |
| ! | GCGGGGATGGGGATGGGGCG+GGG | + | chr1_4:11409465-11409484 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 11407942 | 11413808 | 11407942 | ID=Msa0150150;Name=Msa0150150 |
| chr1_4 | mRNA | 11407942 | 11413808 | 11407942 | ID=Msa0150150-mRNA-1;Parent=Msa0150150;Name=Msa0150150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=60|1|1|1|1|1|3|175|591 |
| chr1_4 | exon | 11407942 | 11408943 | 11407942 | ID=Msa0150150-mRNA-1:exon:4725;Parent=Msa0150150-mRNA-1 |
| chr1_4 | exon | 11409425 | 11409680 | 11409425 | ID=Msa0150150-mRNA-1:exon:4724;Parent=Msa0150150-mRNA-1 |
| chr1_4 | exon | 11413056 | 11413808 | 11413056 | ID=Msa0150150-mRNA-1:exon:4723;Parent=Msa0150150-mRNA-1 |
| chr1_4 | five_prime_UTR | 11413749 | 11413808 | 11413749 | ID=Msa0150150-mRNA-1:five_prime_utr;Parent=Msa0150150-mRNA-1 |
| chr1_4 | CDS | 11413056 | 11413748 | 11413056 | ID=Msa0150150-mRNA-1:cds;Parent=Msa0150150-mRNA-1 |
| chr1_4 | CDS | 11409425 | 11409680 | 11409425 | ID=Msa0150150-mRNA-1:cds;Parent=Msa0150150-mRNA-1 |
| chr1_4 | CDS | 11408117 | 11408943 | 11408117 | ID=Msa0150150-mRNA-1:cds;Parent=Msa0150150-mRNA-1 |
| chr1_4 | three_prime_UTR | 11407942 | 11408116 | 11407942 | ID=Msa0150150-mRNA-1:three_prime_utr;Parent=Msa0150150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
