AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1451520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1451520 MtrunA17_Chr2g0282211 96.104 924 28 1 56 971 1 924 0.0 1843
Msa1451520 MtrunA17_Chr4g0047301 69.171 905 251 9 80 971 25 914 0.0 1248
Msa1451520 MtrunA17_Chr4g0009054 86.646 322 21 2 404 717 2 309 0.0 543
Msa1451520 MtrunA17_Chr1g0211131 40.541 666 354 15 334 966 409 1065 1.16e-149 471
Msa1451520 MtrunA17_Chr1g0211131 46.667 210 110 2 97 305 92 300 4.01e-48 186
Msa1451520 MtrunA17_Chr1g0198021 53.986 276 119 3 697 966 108 381 9.17e-97 310
Msa1451520 MtrunA17_Chr2g0317631 53.791 277 120 3 697 967 277 551 1.04e-93 310
Msa1451520 MtrunA17_Chr8g0376201 50.177 283 125 4 696 966 160 438 5.55e-90 295
Msa1451520 MtrunA17_Chr8g0360171 51.986 277 125 3 697 967 472 746 1.54e-83 286
Msa1451520 MtrunA17_Chr8g0376111 55.605 223 97 2 700 921 13 234 1.71e-79 262
Msa1451520 MtrunA17_Chr7g0233611 48.263 259 129 3 699 956 7 261 6.52e-76 252
Msa1451520 MtrunA17_Chr7g0233631 48.062 258 129 3 700 956 8 261 3.65e-74 247
Msa1451520 MtrunA17_Chr4g0045101 51.570 223 106 2 700 921 7 228 9.26e-73 243
Msa1451520 MtrunA17_Chr7g0222941 60.571 175 67 1 697 871 61 233 2.11e-70 234
Msa1451520 MtrunA17_Chr2g0317641 61.850 173 64 1 755 925 1 173 7.53e-70 230
Msa1451520 MtrunA17_Chr2g0285321 45.794 214 106 5 755 960 1 212 5.52e-49 172
Msa1451520 MtrunA17_Chr2g0317611 62.832 113 40 1 697 809 64 174 6.58e-46 162
Msa1451520 MtrunA17_Chr2g0317621 42.857 154 80 4 821 966 14 167 1.37e-31 122
Msa1451520 MtrunA17_Chr4g0001491 37.662 154 86 1 741 894 153 296 1.68e-27 114
Msa1451520 MtrunA17_Chr5g0432831 28.947 152 95 4 728 876 3 144 1.65e-13 68.9
Msa1451520 MtrunA17_Chr3g0108261 28.289 152 96 4 728 876 3 144 5.96e-13 67.4
Msa1451520 MtrunA17_Chr7g0275361 28.289 152 96 4 728 876 3 144 9.66e-13 66.6
Msa1451520 MtrunA17_Chr4g0037011 27.815 151 96 4 728 875 3 143 1.41e-12 66.2
Msa1451520 MtrunA17_Chr1g0154011 27.632 152 97 4 728 876 3 144 4.22e-12 65.1
Msa1451520 MtrunA17_Chr8g0378601 32.000 125 73 4 728 851 24 137 1.32e-11 63.9
Msa1451520 MtrunA17_Chr8g0369311 30.081 123 76 3 728 850 59 171 5.53e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1451520 AT2G33770.1 51.002 898 416 8 76 965 20 901 0.0 890
Msa1451520 AT2G16920.1 39.521 668 352 15 346 971 444 1101 4.98e-142 452
Msa1451520 AT2G16920.1 38.585 311 184 5 83 391 116 421 1.15e-56 213
Msa1451520 AT2G16920.2 39.521 668 352 15 346 971 444 1101 4.98e-142 452
Msa1451520 AT2G16920.2 38.585 311 184 5 83 391 116 421 1.15e-56 213
Msa1451520 AT1G53025.1 53.704 270 118 2 697 961 244 511 1.09e-90 300
Msa1451520 AT1G53025.2 53.704 270 118 2 697 961 244 511 1.90e-90 299
Msa1451520 AT3G15355.1 55.870 247 103 2 697 939 305 549 3.85e-88 295
Msa1451520 AT1G53023.1 49.818 275 117 5 697 960 21 285 6.49e-83 271
Msa1451520 AT1G64230.2 29.605 152 94 4 728 876 3 144 1.12e-13 70.1
Msa1451520 AT1G64230.1 29.605 152 94 4 728 876 3 144 1.12e-13 70.1
Msa1451520 AT5G41700.3 27.848 158 99 3 728 885 3 145 3.40e-13 68.6
Msa1451520 AT4G27960.1 32.520 123 73 3 728 850 3 115 1.11e-12 67.0
Msa1451520 AT5G41700.5 28.289 152 96 4 728 876 3 144 1.36e-12 66.6
Msa1451520 AT5G41700.2 28.289 152 96 4 728 876 3 144 1.36e-12 66.6
Msa1451520 AT5G41700.1 28.289 152 96 4 728 876 3 144 1.36e-12 66.6
Msa1451520 AT5G53300.2 32.520 123 73 3 728 850 3 115 1.92e-12 66.2
Msa1451520 AT5G53300.4 32.520 123 73 3 728 850 3 115 1.92e-12 66.2
Msa1451520 AT5G53300.1 32.520 123 73 3 728 850 3 115 1.92e-12 66.2
Msa1451520 AT5G41700.4 28.758 153 95 5 728 876 3 145 1.99e-12 66.2
Msa1451520 AT3G08690.2 28.289 152 96 4 728 876 3 144 4.24e-12 65.5
Msa1451520 AT3G08690.1 28.289 152 96 4 728 876 3 144 4.24e-12 65.5
Msa1451520 AT1G64230.3 28.571 161 93 5 728 876 3 153 5.18e-12 65.5
Msa1451520 AT4G27960.2 32.520 123 73 3 728 850 33 145 5.28e-12 65.9
Msa1451520 AT5G56150.1 26.974 152 98 4 728 876 3 144 5.00e-11 62.4
Msa1451520 AT1G64230.5 31.496 127 74 4 753 876 70 186 5.17e-11 63.5
Msa1451520 AT1G64230.4 31.496 127 74 4 753 876 70 186 5.17e-11 63.5

Find 234 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGATGAATTGTTTATAAT+TGG 0.121149 tig0033439:-25307 Msa1451520:CDS
CAGATGGTGCACTACATTTC+TGG 0.179738 tig0033439:-23316 Msa1451520:CDS
GAGTTCACCATCAAGGTTTC+TGG 0.189989 tig0033439:-22227 Msa1451520:three_prime_UTR
TCCTGTATTGGCAATGTTAC+TGG 0.190119 tig0033439:-24803 Msa1451520:CDS
TCATAAATACTCATGAATTT+TGG 0.201699 tig0033439:-25198 Msa1451520:CDS
CTAGCCATACTATGCTTATT+AGG 0.215596 tig0033439:+25361 None:intergenic
GAAGGTGATTGCGTAATTAA+TGG 0.245833 tig0033439:-25856 Msa1451520:CDS
CGGTACCACTCCACGTATTT+AGG 0.255696 tig0033439:+23239 None:intergenic
TTTCCCTTACCTTTCCCTTC+TGG 0.262263 tig0033439:+24498 None:intergenic
TGCGAATCTTCAAGAAAATT+AGG 0.265210 tig0033439:+25721 None:intergenic
GTTGATATCATATGGCAAAA+TGG 0.277272 tig0033439:-25268 Msa1451520:CDS
TGGCTTGCCTCGGTTCCTTT+AGG 0.278669 tig0033439:-25556 Msa1451520:CDS
ACAAATTAATATTACACATT+AGG 0.283107 tig0033439:+22198 None:intergenic
TGTTGACGTATTAGTGGATT+TGG 0.290027 tig0033439:-25947 Msa1451520:CDS
CAGGTTTGGTGTATGTTAAT+TGG 0.295995 tig0033439:-25576 Msa1451520:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.296748 tig0033439:+25694 None:intergenic
CATCAGTTTGTGATGGAAAA+AGG 0.296978 tig0033439:-25172 Msa1451520:CDS
ACGAATCTTCAGAAGTTTCT+TGG 0.302328 tig0033439:+25888 None:intergenic
TAAGAAAGATTGGGCGAAAA+AGG 0.304249 tig0033439:-23854 Msa1451520:CDS
TCTGTTCAACTTGTTCCTTT+TGG 0.304307 tig0033439:+25413 None:intergenic
ACATAGCCATCTAGCTGATT+TGG 0.305121 tig0033439:+25648 None:intergenic
CACATCCAAGCCAGATGATT+TGG 0.307229 tig0033439:-25050 Msa1451520:CDS
TTCCCCGACTCATACAAATT+AGG 0.307302 tig0033439:+23277 None:intergenic
TCCATATTGTGAAGTTATTC+CGG 0.328272 tig0033439:-24073 Msa1451520:CDS
GAGCATATTATCAAGTTTAG+AGG 0.332505 tig0033439:-26079 Msa1451520:CDS
TATCCAGCTTCATTGAAATA+AGG 0.334312 tig0033439:+23136 None:intergenic
TTGATATCATATGGCAAAAT+GGG 0.335907 tig0033439:-25267 Msa1451520:CDS
TTGCGCCCTATGAAATATTT+CGG 0.336021 tig0033439:-24622 Msa1451520:CDS
GCAGCCATCGTTGGTGCGTC+AGG 0.343392 tig0033439:-23508 Msa1451520:CDS
TAGACCCAACATGGATTTGC+AGG 0.349124 tig0033439:+23042 None:intergenic
AGTTATTCGGATAACTGATT+TGG 0.358225 tig0033439:+24846 None:intergenic
CAGTTACCTACAGAGTTATT+CGG 0.361797 tig0033439:+24833 None:intergenic
CCCGACAGGACAGGGATAAC+TGG 0.366013 tig0033439:+26578 None:intergenic
CGTGGCTTGGTCAGGTTCAA+AGG 0.367253 tig0033439:-25831 Msa1451520:CDS
TCTTTCTTGTCGAGAAAATC+AGG 0.369067 tig0033439:+24165 None:intergenic
ACCAATCCGAAATATTTCAT+AGG 0.370935 tig0033439:+24616 None:intergenic
TACGCAATCACCTTCGGAAA+TGG 0.371493 tig0033439:+25864 None:intergenic
CTTTGTAGGTTAAGAAAGAT+TGG 0.373014 tig0033439:-23864 Msa1451520:intron
ACCGGAATAACTTCACAATA+TGG 0.380054 tig0033439:+24072 None:intergenic
ACATATACTTGTTGCATGTA+AGG 0.380265 tig0033439:-22432 Msa1451520:CDS
GCAGGATGTGAATCGGTCTC+AGG 0.380716 tig0033439:+24126 None:intergenic
ATCCTGTCGAAGTTCCCTTT+TGG 0.382551 tig0033439:+22360 None:intergenic
GCAAAATGGGGAACATACTT+TGG 0.388474 tig0033439:-25254 Msa1451520:CDS
TGGATGAATTGTTTATAATT+GGG 0.395490 tig0033439:-25306 Msa1451520:CDS
TCAAGTCCTTCTCTCTCTGC+AGG 0.397929 tig0033439:-23179 Msa1451520:CDS
TATGACAGGCATAGAGTTGA+TGG 0.403682 tig0033439:-26199 Msa1451520:intron
CACAATATCGCCAAAACAAC+AGG 0.405370 tig0033439:+24967 None:intergenic
AATCCTAATTTGTATGAGTC+GGG 0.406101 tig0033439:-23280 Msa1451520:CDS
GAAAATGCCTCAGCAAGCTT+AGG 0.411552 tig0033439:+22311 None:intergenic
CTAGATGGCTATGTGACAAT+TGG 0.415868 tig0033439:-25639 Msa1451520:CDS
AAAGCTTACAGGTGGTTCAT+TGG 0.416999 tig0033439:+23429 None:intergenic
TGAAACAAATATTGAGGAGT+TGG 0.417478 tig0033439:-24558 Msa1451520:CDS
CTCACCTGCAAATCCATGTT+GGG 0.417765 tig0033439:-23046 Msa1451520:CDS
TGAAGAACTGTGGAAGATCC+AGG 0.417931 tig0033439:+23199 None:intergenic
TATCTTGAAGGAGCTCCTAT+TGG 0.419954 tig0033439:-22407 Msa1451520:CDS
ATATTTGTTTCATAAGAAAC+AGG 0.423199 tig0033439:+24569 None:intergenic
TAATGGGCCGTGGCTTGGTC+AGG 0.425779 tig0033439:-25839 Msa1451520:CDS
CCTGTCGGGCAAATCTCCTT+TGG 0.428432 tig0033439:-26564 Msa1451520:CDS
TCTTCCTAATAAGCATAGTA+TGG 0.429927 tig0033439:-25365 Msa1451520:CDS
GAAAATGCCGGCTTTAATGC+TGG 0.431753 tig0033439:+24257 None:intergenic
AAGCTTACAGGTGGTTCATT+GGG 0.434273 tig0033439:+23430 None:intergenic
TTGTTCTGTGGAAGCAGGTT+TGG 0.434981 tig0033439:-25590 Msa1451520:CDS
GGTTCTCCAGCCAAATCATC+TGG 0.436135 tig0033439:+25040 None:intergenic
ATGGTCATGTGGAGGTGAAA+TGG 0.437018 tig0033439:-24772 Msa1451520:CDS
CAAACTGGGCAAATCTCCTT+TGG 0.438040 tig0033439:-26623 None:intergenic
AAGCCTTATTTCAATGAAGC+TGG 0.440632 tig0033439:-23139 Msa1451520:CDS
AATGTTACTGGTTTCAAAGA+TGG 0.442138 tig0033439:-24791 Msa1451520:CDS
CGTAAGTGTTGACGTATTAG+TGG 0.444648 tig0033439:-25953 Msa1451520:CDS
AACTGTCACCTGTCCTGTAT+TGG 0.444670 tig0033439:-24815 Msa1451520:CDS
ATTAATTACGCAATCACCTT+CGG 0.445189 tig0033439:+25858 None:intergenic
GCATTTCCCTCTTCAAATGT+AGG 0.445438 tig0033439:+24189 None:intergenic
AAGGTGATTGCGTAATTAAT+GGG 0.445702 tig0033439:-25855 Msa1451520:CDS
ATTAATATTACACATTAGGT+TGG 0.445834 tig0033439:+22202 None:intergenic
AGACCAAGGTTGATATCATA+TGG 0.446000 tig0033439:-25276 Msa1451520:CDS
TGAGTATTTATGACATTCAC+AGG 0.447750 tig0033439:+25208 None:intergenic
GTTCAATGGCAGCTTGAGGC+AGG 0.448278 tig0033439:+24286 None:intergenic
TAACTTCACAATATGGAGTT+GGG 0.448536 tig0033439:+24079 None:intergenic
ACCAGTAACATTGCCAATAC+AGG 0.454925 tig0033439:+24802 None:intergenic
CAAAATGGGGAACATACTTT+GGG 0.460122 tig0033439:-25253 Msa1451520:CDS
GTAATTAATGGGCCGTGGCT+TGG 0.460290 tig0033439:-25844 Msa1451520:CDS
TTTGTAGGTTAAGAAAGATT+GGG 0.461128 tig0033439:-23863 Msa1451520:intron
CTCAGATGACTGATTCAGAC+TGG 0.461326 tig0033439:-26173 Msa1451520:CDS
AGGTGGTTCATTGGGATACT+CGG 0.464479 tig0033439:+23438 None:intergenic
CAAATCATCTGGCTTGGATG+TGG 0.466764 tig0033439:+25051 None:intergenic
TCCAGTTATCCCTGTCCTGT+CGG 0.467183 tig0033439:-26579 Msa1451520:CDS
CCAGTTATCCCTGTCCTGTC+GGG 0.467525 tig0033439:-26578 Msa1451520:CDS
CTGCTTCCAAATCAGCTAGA+TGG 0.468274 tig0033439:-25654 Msa1451520:CDS
ACCTTTCCCTTCTGGTCAGA+AGG 0.469296 tig0033439:+24506 None:intergenic
CCTCACCTGCAAATCCATGT+TGG 0.470353 tig0033439:-23047 Msa1451520:CDS
CCAATCCGAAATATTTCATA+GGG 0.471195 tig0033439:+24617 None:intergenic
TCCAGCCAAATCATCTGGCT+TGG 0.472208 tig0033439:+25045 None:intergenic
ACAGGATTTAAAATTATGCT+TGG 0.472526 tig0033439:-22344 Msa1451520:CDS
ACTGTTTGTTCTGTGGAAGC+AGG 0.472556 tig0033439:-25595 Msa1451520:CDS
AAGTGAGCATGAAAACCAAA+AGG 0.473074 tig0033439:-22375 Msa1451520:CDS
CGAAGTTGAGTTCACCATCA+AGG 0.473832 tig0033439:-22234 Msa1451520:three_prime_UTR
GTTGGAACCAGAAACCTTGA+TGG 0.474030 tig0033439:+22220 None:intergenic
GTGGATTTGGAAAACAATCA+AGG 0.476648 tig0033439:-25934 Msa1451520:CDS
TCGCATGCAAACTGGCAACT+TGG 0.478429 tig0033439:-25463 Msa1451520:CDS
AAACCTTGTGGTGTGTCATA+TGG 0.479650 tig0033439:-22114 Msa1451520:three_prime_UTR
CCAAAGGAGATTTGCCCGAC+AGG 0.481494 tig0033439:+26564 None:intergenic
TCGCAGTATCCATACTATCC+AGG 0.482056 tig0033439:-25703 Msa1451520:CDS
GTCACTACCGCTGCTCTCAC+TGG 0.484987 tig0033439:+26143 None:intergenic
TAAGTGTATTGTTTGATGAC+GGG 0.485334 tig0033439:-25795 Msa1451520:CDS
TCGGATAACTGATTTGGTAC+AGG 0.485464 tig0033439:+24852 None:intergenic
CCATTGCTGTCTAAAGAAAC+CGG 0.485769 tig0033439:+24054 None:intergenic
AAAAGGGTTGCCGATATCTC+AGG 0.486594 tig0033439:-23965 Msa1451520:intron
ACAAAGCTAGTTTCTTGAAA+CGG 0.487062 tig0033439:+26505 None:intergenic
CTGTCCAGATGGGTCTGATA+AGG 0.487275 tig0033439:+25987 None:intergenic
GCACTCACAGTTTCTGTCGT+TGG 0.488345 tig0033439:+25019 None:intergenic
AATGCTGGAGAAAAGTTCAA+TGG 0.490090 tig0033439:+24272 None:intergenic
GGAGATTTGCCCGACAGGAC+AGG 0.490299 tig0033439:+26569 None:intergenic
ATAACTTCACAATATGGAGT+TGG 0.491759 tig0033439:+24078 None:intergenic
TGCTCCTTATCAGACCCATC+TGG 0.492187 tig0033439:-25991 Msa1451520:CDS
TTCGAGAGAACATTTGCTTA+CGG 0.492444 tig0033439:-26024 Msa1451520:CDS
GTGGCTTGGTCAGGTTCAAA+GGG 0.493198 tig0033439:-25830 Msa1451520:CDS
ACCCTCCCCATCTGTCCAGA+TGG 0.500046 tig0033439:+25976 None:intergenic
AACCAAAAGGGAACTTCGAC+AGG 0.501479 tig0033439:-22362 Msa1451520:CDS
ATAAGTCTAGCAATCAAAGA+TGG 0.502655 tig0033439:-25135 Msa1451520:CDS
GCTTCCAGTTGCAGACCAAA+AGG 0.507212 tig0033439:-25428 Msa1451520:CDS
ATCAGACCCATCTGGACAGA+TGG 0.507301 tig0033439:-25983 Msa1451520:CDS
ACATTTGAATTAGAACCTAA+AGG 0.507612 tig0033439:+25541 None:intergenic
TTCTTATGAAACAAATATTG+AGG 0.508341 tig0033439:-24564 Msa1451520:CDS
TTGCCATATGATATCAACCT+TGG 0.509257 tig0033439:+25273 None:intergenic
CATTTCCCTCTTCAAATGTA+GGG 0.509483 tig0033439:+24190 None:intergenic
AAATCCTAATTTGTATGAGT+CGG 0.511272 tig0033439:-23281 Msa1451520:CDS
CCCTATGAAATATTTCGGAT+TGG 0.516222 tig0033439:-24617 Msa1451520:CDS
TTAAGTGTATTGTTTGATGA+CGG 0.518697 tig0033439:-25796 Msa1451520:CDS
TTGATAATATGCTCTGAGCT+TGG 0.522688 tig0033439:+26088 None:intergenic
TGGTCATGTGGAGGTGAAAT+GGG 0.524305 tig0033439:-24771 Msa1451520:CDS
CCCTCCCCATCTGTCCAGAT+GGG 0.526969 tig0033439:+25977 None:intergenic
AAAATGCCTCAGCAAGCTTA+GGG 0.527113 tig0033439:+22312 None:intergenic
GCTGGATATGACCAACAGAT+TGG 0.528690 tig0033439:-23121 Msa1451520:CDS
CTTGAAGGAGCTCCTATTGG+AGG 0.529520 tig0033439:-22404 Msa1451520:CDS
CAAACTGGCAACTTGGTGAC+TGG 0.530987 tig0033439:-25456 Msa1451520:CDS
TCCAAGCCAGATGATTTGGC+TGG 0.531372 tig0033439:-25046 Msa1451520:CDS
CTCATGCGAGCAGCCATCGT+TGG 0.532120 tig0033439:-23517 Msa1451520:CDS
CCATTCTTTCTTCGAAAACA+CGG 0.534870 tig0033439:+23542 None:intergenic
ATAGTATGGCTAGAGAATGT+AGG 0.535300 tig0033439:-25351 Msa1451520:CDS
GAGATTTGCCCGACAGGACA+GGG 0.535811 tig0033439:+26570 None:intergenic
TGGAGAGACAATCATGATGA+AGG 0.535953 tig0033439:-25619 Msa1451520:CDS
GCATGTAAGGCATATCTTGA+AGG 0.536205 tig0033439:-22419 Msa1451520:CDS
TTAACCTTCACTCTCTGCCC+TGG 0.537335 tig0033439:+25685 None:intergenic
GTGGAGGTGAAATGGGCTAC+TGG 0.537468 tig0033439:-24764 Msa1451520:CDS
ATTGCGTAATTAATGGGCCG+TGG 0.539539 tig0033439:-25849 Msa1451520:CDS
ATGTGAACACTCCTCCATGC+TGG 0.539836 tig0033439:-25522 Msa1451520:CDS
TAAGTCTAGCAATCAAAGAT+GGG 0.540967 tig0033439:-25134 Msa1451520:CDS
GTATGTTAATTGGCTTGCCT+CGG 0.541575 tig0033439:-25566 Msa1451520:CDS
CCGGTTTCTTTAGACAGCAA+TGG 0.542172 tig0033439:-24054 Msa1451520:CDS
ACAGCAAGAATGGAGCATCC+TGG 0.543842 tig0033439:-23830 Msa1451520:CDS
TTGGCCTCATCAGTTTGTGA+TGG 0.547724 tig0033439:-25179 Msa1451520:CDS
CACAGTCCCTACATTTGAAG+AGG 0.550892 tig0033439:-24196 Msa1451520:CDS
TCAGACCCATCTGGACAGAT+GGG 0.551064 tig0033439:-25982 Msa1451520:CDS
CTTCAGCTCTACCAATCTGT+TGG 0.553311 tig0033439:+23110 None:intergenic
AGCTGATTTGGAAGCAGTCG+AGG 0.556217 tig0033439:+25660 None:intergenic
TTTGTATCTGTGACAAGCAT+AGG 0.556365 tig0033439:-26487 Msa1451520:intron
CGCAGTATCCATACTATCCA+GGG 0.557107 tig0033439:-25702 Msa1451520:CDS
GTAGACTGCAACGTGCTCGC+AGG 0.559026 tig0033439:+24108 None:intergenic
ATTCATCCATGCTAGAGTTG+AGG 0.560651 tig0033439:+25320 None:intergenic
CAACAGATTGGTAGAGCTGA+AGG 0.563152 tig0033439:-23109 Msa1451520:CDS
AAGAAAGATTTGGAAACTTG+TGG 0.567107 tig0033439:-24150 Msa1451520:CDS
ATTTCTTAGTAGACCCAACA+TGG 0.568180 tig0033439:+23033 None:intergenic
CGTGCTCGCAGGATGTGAAT+CGG 0.569550 tig0033439:+24119 None:intergenic
AAGATTCGTTCCATTTCCGA+AGG 0.570776 tig0033439:-25874 Msa1451520:CDS
AAATCATCTGGCTTGGATGT+GGG 0.571782 tig0033439:+25052 None:intergenic
CAAATGTTCTCTCGAATGAG+AGG 0.571997 tig0033439:+26031 None:intergenic
AAGTCTGCCTTCTGACCAGA+AGG 0.572093 tig0033439:-24513 Msa1451520:CDS
TAAGTACGAGATCACTACCT+TGG 0.572957 tig0033439:-25770 Msa1451520:CDS
TGGTCAGGTTCAAAGGGTGG+TGG 0.573707 tig0033439:-25824 Msa1451520:CDS
CAGCGGTAGTGACGATCAAG+AGG 0.576935 tig0033439:-26133 Msa1451520:CDS
GAGAAGGACTTGAAGAACTG+TGG 0.579103 tig0033439:+23189 None:intergenic
ACCCATCTGGACAGATGGGG+AGG 0.579182 tig0033439:-25978 Msa1451520:CDS
CAGGATGTGAATCGGTCTCA+GGG 0.581404 tig0033439:+24127 None:intergenic
AAGAAACCTCAACTCTAGCA+TGG 0.582415 tig0033439:-25326 Msa1451520:CDS
GGTCGATGCAAAAGAGCATA+CGG 0.583136 tig0033439:-25098 Msa1451520:CDS
CAAGAGCCTGCAGAGAGAGA+AGG 0.585465 tig0033439:+23173 None:intergenic
AGTGAGCATGAAAACCAAAA+GGG 0.588026 tig0033439:-22374 Msa1451520:CDS
AGCATACGGTAAACGTACAA+TGG 0.588340 tig0033439:-25084 Msa1451520:CDS
GGTGGTTCATTGGGATACTC+GGG 0.589885 tig0033439:+23439 None:intergenic
GCGACTGAAGTGTGGAACCC+TGG 0.591048 tig0033439:-23217 Msa1451520:CDS
GGGTCTACTAAGAAATCCGC+CGG 0.593303 tig0033439:-23026 Msa1451520:CDS
CTTTGAACCTGACCAAGCCA+CGG 0.595882 tig0033439:+25832 None:intergenic
AACTGAAAATTAAATGCCAA+AGG 0.596147 tig0033439:+26548 None:intergenic
CTCTTCAAATGTAGGGACTG+TGG 0.596428 tig0033439:+24197 None:intergenic
TTCAATGGCAGCTTGAGGCA+GGG 0.599370 tig0033439:+24287 None:intergenic
AGTTATCCGAATAACTCTGT+AGG 0.599419 tig0033439:-24839 Msa1451520:CDS
ACATGGATTTGCAGGTGAGG+AGG 0.599540 tig0033439:+23050 None:intergenic
CAGCCATCGTTGGTGCGTCA+GGG 0.600281 tig0033439:-23507 Msa1451520:CDS
GATAAATGTGAAAAGCATCA+AGG 0.600926 tig0033439:-24327 Msa1451520:CDS
TTCAATGAGTGACTTGAATG+TGG 0.607243 tig0033439:-24891 Msa1451520:CDS
TAACATTGCCAATACAGGAC+AGG 0.607869 tig0033439:+24807 None:intergenic
AAGATGGGGTGTCATTCTAT+CGG 0.608470 tig0033439:-25119 Msa1451520:CDS
ATCCTAATTTGTATGAGTCG+GGG 0.609165 tig0033439:-23279 Msa1451520:CDS
GCCTTCTGACCAGAAGGGAA+AGG 0.614161 tig0033439:-24507 Msa1451520:intron
ACAGTCCCTACATTTGAAGA+GGG 0.616720 tig0033439:-24195 Msa1451520:CDS
GGCTACTGGTTTAATGACCA+AGG 0.618934 tig0033439:-24750 Msa1451520:intron
CCAACATGGATTTGCAGGTG+AGG 0.621597 tig0033439:+23047 None:intergenic
TGTCCCTGACGCACCAACGA+TGG 0.623841 tig0033439:+23504 None:intergenic
TCAGATGACTGATTCAGACT+GGG 0.625007 tig0033439:-26172 Msa1451520:CDS
ATGGTTCAGATCAGTTGAAG+CGG 0.625128 tig0033439:-24035 Msa1451520:CDS
TGAAGGAACTGTTTGTTCTG+TGG 0.628237 tig0033439:-25602 Msa1451520:CDS
GAAGAACTGTGGAAGATCCA+GGG 0.632547 tig0033439:+23200 None:intergenic
TTCACAGGAACTAAATTCTG+CGG 0.636282 tig0033439:+25223 None:intergenic
GCTTGGTCAGGTTCAAAGGG+TGG 0.637694 tig0033439:-25827 Msa1451520:CDS
TTACGACTCTGAATTGCCAA+AGG 0.638582 tig0033439:+26607 None:intergenic
TCAAGTTTAGAGGAAAGCAT+CGG 0.640460 tig0033439:-26069 Msa1451520:CDS
TGGTTTCAAAGATGGTCATG+TGG 0.641331 tig0033439:-24783 Msa1451520:CDS
AAAAGTTCAATGGCAGCTTG+AGG 0.642640 tig0033439:+24282 None:intergenic
GTTTAGAGGAAAGCATCGGT+AGG 0.644331 tig0033439:-26065 Msa1451520:CDS
TGGGTGCTCAACAAGTTCGT+AGG 0.644662 tig0033439:+24997 None:intergenic
CTATCCAGGGCAGAGAGTGA+AGG 0.645378 tig0033439:-25689 Msa1451520:CDS
CCCATCTGGACAGATGGGGA+GGG 0.645750 tig0033439:-25977 Msa1451520:CDS
AATTGGGAAGATAAAGACCA+AGG 0.649352 tig0033439:-25290 Msa1451520:CDS
AGTCTCCTAAATACGTGGAG+TGG 0.650953 tig0033439:-23244 Msa1451520:CDS
ATGGTGCACTACATTTCTGG+CGG 0.653771 tig0033439:-23313 Msa1451520:CDS
AAGTCTAGCAATCAAAGATG+GGG 0.654907 tig0033439:-25133 Msa1451520:CDS
GTGTGAAGTACGCACCAGGA+AGG 0.655095 tig0033439:+23800 None:intergenic
GTGGTACCGCGACTGAAGTG+TGG 0.655672 tig0033439:-23225 Msa1451520:CDS
TGATATCATATGGCAAAATG+GGG 0.655752 tig0033439:-25266 Msa1451520:CDS
GAGTCTTCCAGTGAGAGCAG+CGG 0.657537 tig0033439:-26150 Msa1451520:CDS
GGTTCATTGGGATACTCGGG+AGG 0.657691 tig0033439:+23442 None:intergenic
TCAGGGACACCTTATCATGA+CGG 0.665159 tig0033439:-23490 Msa1451520:CDS
ACTCCTCCCTAAGCTTGCTG+AGG 0.670365 tig0033439:-22318 Msa1451520:CDS
ATGCCTCAGCAAGCTTAGGG+AGG 0.672343 tig0033439:+22315 None:intergenic
TGGCGATATTGTGTTCAAGG+CGG 0.673517 tig0033439:-24957 Msa1451520:CDS
ATTAGAACCTAAAGGAACCG+AGG 0.675588 tig0033439:+25549 None:intergenic
CAGACCCATCTGGACAGATG+GGG 0.678401 tig0033439:-25981 Msa1451520:CDS
AAGCCATATGACACACCACA+AGG 0.681463 tig0033439:+22111 None:intergenic
GTTTGAGTCTCCTAAATACG+TGG 0.681686 tig0033439:-23249 Msa1451520:CDS
AGGGTTCCACACTTCAGTCG+CGG 0.684110 tig0033439:+23219 None:intergenic
TTGGAATCTTGCCAGCATGG+AGG 0.693099 tig0033439:+25511 None:intergenic
TCTACTAAGAAATCCGCCGG+AGG 0.713451 tig0033439:-23023 Msa1451520:intron
GTTCATTGGGATACTCGGGA+GGG 0.726068 tig0033439:+23443 None:intergenic
AGTCTGCCTTCTGACCAGAA+GGG 0.732957 tig0033439:-24512 Msa1451520:CDS
TTTCAAAGATGGTCATGTGG+AGG 0.745253 tig0033439:-24780 Msa1451520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCAGATTAAATATTAA+TGG + tig0033439:24975-24994 None:intergenic 10.0%
!!! TTCATTTTATTAAACTAAAA+AGG - tig0033439:26001-26020 Msa1451520:CDS 10.0%
!! AGAAATATTGACAATAAATA+AGG + tig0033439:22355-22374 None:intergenic 15.0%
!! TTATTGTCAATATTTCTTTA+CGG - tig0033439:22358-22377 Msa1451520:CDS 15.0%
!!! TAATTATATTGAAAGCATTT+TGG - tig0033439:24765-24784 Msa1451520:CDS 15.0%
!! ACAAATTAATATTACACATT+AGG + tig0033439:26483-26502 None:intergenic 15.0%
!!! TAAAATCTTATCATTTTCCA+AGG + tig0033439:22928-22947 None:intergenic 20.0%
!! ATGGATGAATTGTTTATAAT+TGG - tig0033439:23371-23390 Msa1451520:intron 20.0%
!! TGGATGAATTGTTTATAATT+GGG - tig0033439:23372-23391 Msa1451520:intron 20.0%
!!! TCATAAATACTCATGAATTT+TGG - tig0033439:23480-23499 Msa1451520:CDS 20.0%
!! ATATATTCACAAAAAGTTGA+GGG + tig0033439:23958-23977 None:intergenic 20.0%
!! AATATATTCACAAAAAGTTG+AGG + tig0033439:23959-23978 None:intergenic 20.0%
!! ATATTTGTTTCATAAGAAAC+AGG + tig0033439:24112-24131 None:intergenic 20.0%
!! TTCTTATGAAACAAATATTG+AGG - tig0033439:24114-24133 Msa1451520:CDS 20.0%
!!! AATTTTATAACCTGAGATAT+CGG + tig0033439:24726-24745 None:intergenic 20.0%
!! TTCTTGTAAGTAAATTAACT+TGG + tig0033439:25024-25043 None:intergenic 20.0%
!! AGTTAATTTACTTACAAGAA+AGG - tig0033439:25024-25043 Msa1451520:CDS 20.0%
!! GTTAATTTACTTACAAGAAA+GGG - tig0033439:25025-25044 Msa1451520:CDS 20.0%
!! AATATCTCATTCTATCATTA+TGG - tig0033439:25323-25342 Msa1451520:CDS 20.0%
!! GAGGAAAATTATTAGTATTA+TGG - tig0033439:25792-25811 Msa1451520:CDS 20.0%
!! AAATTATTAGTATTATGGAG+AGG - tig0033439:25797-25816 Msa1451520:CDS 20.0%
!! TTCAAGAAACTAATGTTAAT+TGG + tig0033439:25856-25875 None:intergenic 20.0%
!! ATTAATATTACACATTAGGT+TGG + tig0033439:26479-26498 None:intergenic 20.0%
!! TAACAAAAATAAAAACCTTG+TGG - tig0033439:26552-26571 Msa1451520:CDS 20.0%
! AACTGAAAATTAAATGCCAA+AGG + tig0033439:22133-22152 None:intergenic 25.0%
!!! CATTTAATTTTCAGTTTCAG+TGG - tig0033439:22137-22156 Msa1451520:three_prime_UTR 25.0%
!! ATTGTTGATTGCAATACATA+CGG - tig0033439:22276-22295 Msa1451520:CDS 25.0%
!! ATGTTTCTATTAGCTTGAAA+AGG - tig0033439:22312-22331 Msa1451520:CDS 25.0%
!! GAGGAAATAATGGTATTTTT+AGG + tig0033439:22403-22422 None:intergenic 25.0%
! ACAATAAAAGGAGGAAATAA+TGG + tig0033439:22413-22432 None:intergenic 25.0%
! TTAAGTGTATTGTTTGATGA+CGG - tig0033439:22882-22901 Msa1451520:intron 25.0%
!! TCAAGAAAATTAGGATTTTG+TGG + tig0033439:22951-22970 None:intergenic 25.0%
! ACATTTGAATTAGAACCTAA+AGG + tig0033439:23140-23159 None:intergenic 25.0%
! TTGATATCATATGGCAAAAT+GGG - tig0033439:23411-23430 Msa1451520:intron 25.0%
!!! TTGCATTATATTTTTCAGCT+AGG + tig0033439:23766-23785 None:intergenic 25.0%
!!! ACTTTTTCAATGAGAGAAAA+GGG - tig0033439:24697-24716 Msa1451520:intron 25.0%
!! TAATTATGTTACTTGAGTGA+TGG + tig0033439:24751-24770 None:intergenic 25.0%
! TTTGTAGGTTAAGAAAGATT+GGG - tig0033439:24815-24834 Msa1451520:CDS 25.0%
! TGGACATTTATTTACTCAAT+AGG + tig0033439:25004-25023 None:intergenic 25.0%
!!! AAGCTTTCGAATGTATTTTT+TGG - tig0033439:25265-25284 Msa1451520:CDS 25.0%
!!! AGCTTTCGAATGTATTTTTT+GGG - tig0033439:25266-25285 Msa1451520:CDS 25.0%
!! AAATCCTAATTTGTATGAGT+CGG - tig0033439:25397-25416 Msa1451520:CDS 25.0%
! GTCTTAGACTTATTTAATAG+AGG - tig0033439:25773-25792 Msa1451520:CDS 25.0%
! TAATGTTAATTGGAAACCAA+GGG + tig0033439:25846-25865 None:intergenic 25.0%
! TGATGATCATTATTGTGTAA+TGG + tig0033439:25952-25971 None:intergenic 25.0%
! ATATTACTCTTATTCCACTT+GGG + tig0033439:26077-26096 None:intergenic 25.0%
! TATATTACTCTTATTCCACT+TGG + tig0033439:26078-26097 None:intergenic 25.0%
! TTTATATTTACTTGTCCTTG+AGG - tig0033439:26108-26127 Msa1451520:CDS 25.0%
! AGAATCATTAAATATCCTCA+AGG + tig0033439:26126-26145 None:intergenic 25.0%
!! ACAGGATTTAAAATTATGCT+TGG - tig0033439:26334-26353 Msa1451520:intron 25.0%
! ACAAAGCTAGTTTCTTGAAA+CGG + tig0033439:22176-22195 None:intergenic 30.0%
GTATGTATTGCAATCAACAA+TGG + tig0033439:22277-22296 None:intergenic 30.0%
! TCTATTAGCTTGAAAAGGTA+AGG - tig0033439:22317-22336 Msa1451520:CDS 30.0%
TAGCTTCAAGACACAATAAA+AGG + tig0033439:22425-22444 None:intergenic 30.0%
TAACTGTGACAAATTATGAC+AGG - tig0033439:22465-22484 Msa1451520:CDS 30.0%
!!! GAGGATATTGATTTTCTCTA+TGG - tig0033439:22564-22583 Msa1451520:intron 30.0%
!!! GATATTGATTTTCTCTATGG+TGG - tig0033439:22567-22586 Msa1451520:intron 30.0%
GAGCATATTATCAAGTTTAG+AGG - tig0033439:22599-22618 Msa1451520:intron 30.0%
ATTAATTACGCAATCACCTT+CGG + tig0033439:22823-22842 None:intergenic 30.0%
AAGGTGATTGCGTAATTAAT+GGG - tig0033439:22823-22842 Msa1451520:intron 30.0%
! TAAGTGTATTGTTTGATGAC+GGG - tig0033439:22883-22902 Msa1451520:intron 30.0%
TGCGAATCTTCAAGAAAATT+AGG + tig0033439:22960-22979 None:intergenic 30.0%
TCTTCCTAATAAGCATAGTA+TGG - tig0033439:23313-23332 Msa1451520:CDS 30.0%
GTTGATATCATATGGCAAAA+TGG - tig0033439:23410-23429 Msa1451520:intron 30.0%
TGATATCATATGGCAAAATG+GGG - tig0033439:23412-23431 Msa1451520:intron 30.0%
TGAGTATTTATGACATTCAC+AGG + tig0033439:23473-23492 None:intergenic 30.0%
ATAAGTCTAGCAATCAAAGA+TGG - tig0033439:23543-23562 Msa1451520:CDS 30.0%
TAAGTCTAGCAATCAAAGAT+GGG - tig0033439:23544-23563 Msa1451520:CDS 30.0%
CAAAACAACAGGAAAAATCT+GGG + tig0033439:23703-23722 None:intergenic 30.0%
!! ATATTTTTCAGCTAGGTAAC+CGG + tig0033439:23759-23778 None:intergenic 30.0%
AGTTATTCGGATAACTGATT+TGG + tig0033439:23835-23854 None:intergenic 30.0%
!! AATGTTACTGGTTTCAAAGA+TGG - tig0033439:23887-23906 Msa1451520:intron 30.0%
CCAATCCGAAATATTTCATA+GGG + tig0033439:24064-24083 None:intergenic 30.0%
ACCAATCCGAAATATTTCAT+AGG + tig0033439:24065-24084 None:intergenic 30.0%
TGAAACAAATATTGAGGAGT+TGG - tig0033439:24120-24139 Msa1451520:CDS 30.0%
TAGTTGTCGAGATTAACATA+AGG - tig0033439:24262-24281 Msa1451520:CDS 30.0%
!! GATAAATGTGAAAAGCATCA+AGG - tig0033439:24351-24370 Msa1451520:CDS 30.0%
! TTTTCTCGACAAGAAAGATT+TGG - tig0033439:24518-24537 Msa1451520:CDS 30.0%
AAGAAAGATTTGGAAACTTG+TGG - tig0033439:24528-24547 Msa1451520:CDS 30.0%
TAACTTCACAATATGGAGTT+GGG + tig0033439:24602-24621 None:intergenic 30.0%
ATAACTTCACAATATGGAGT+TGG + tig0033439:24603-24622 None:intergenic 30.0%
TCCATATTGTGAAGTTATTC+CGG - tig0033439:24605-24624 Msa1451520:CDS 30.0%
! CTTTTCTCTCATTGAAAAAG+TGG + tig0033439:24698-24717 None:intergenic 30.0%
!!! CACTTTTTCAATGAGAGAAA+AGG - tig0033439:24696-24715 Msa1451520:intron 30.0%
CAATCTTTCTTAACCTACAA+AGG + tig0033439:24816-24835 None:intergenic 30.0%
CTTTGTAGGTTAAGAAAGAT+TGG - tig0033439:24814-24833 Msa1451520:CDS 30.0%
AAAAACAATCCGTCATGATA+AGG + tig0033439:25200-25219 None:intergenic 30.0%
AAATACATTCGAAAGCTTAC+AGG + tig0033439:25263-25282 None:intergenic 30.0%
! AATCCTAATTTGTATGAGTC+GGG - tig0033439:25398-25417 Msa1451520:CDS 30.0%
! TGAAATAAGGCTTTTCGTTA+AGG + tig0033439:25532-25551 None:intergenic 30.0%
TATCCAGCTTCATTGAAATA+AGG + tig0033439:25545-25564 None:intergenic 30.0%
!! AGGTATAGTTATTTTACCTC+CGG + tig0033439:25674-25693 None:intergenic 30.0%
AGTTATTGTCAATGCTTTCT+AGG + tig0033439:25745-25764 None:intergenic 30.0%
CTAATGTTAATTGGAAACCA+AGG + tig0033439:25847-25866 None:intergenic 30.0%
TTGTGTAGTTGATTACACTA+AGG - tig0033439:25900-25919 Msa1451520:CDS 30.0%
! CGACTTTATCCTTATCTTTT+CGG - tig0033439:26045-26064 Msa1451520:CDS 30.0%
TATTACTCTTATTCCACTTG+GGG + tig0033439:26076-26095 None:intergenic 30.0%
! ACATATACTTGTTGCATGTA+AGG - tig0033439:26246-26265 Msa1451520:intron 30.0%
! TTTTTGGATGTCAACAAACT+GGG + tig0033439:26413-26432 None:intergenic 30.0%
!! ATTTTTGGATGTCAACAAAC+TGG + tig0033439:26414-26433 None:intergenic 30.0%
! ATTTTCAGTTTCAGTGGTGA+AGG - tig0033439:22143-22162 Msa1451520:three_prime_UTR 35.0%
TTTGTATCTGTGACAAGCAT+AGG - tig0033439:22191-22210 Msa1451520:three_prime_UTR 35.0%
CTTCAAGACACAATAAAAGG+AGG + tig0033439:22422-22441 None:intergenic 35.0%
! TTGATAATATGCTCTGAGCT+TGG + tig0033439:22593-22612 None:intergenic 35.0%
! TCAAGTTTAGAGGAAAGCAT+CGG - tig0033439:22609-22628 Msa1451520:intron 35.0%
TTCGAGAGAACATTTGCTTA+CGG - tig0033439:22654-22673 Msa1451520:intron 35.0%
!! TGTTGACGTATTAGTGGATT+TGG - tig0033439:22731-22750 Msa1451520:intron 35.0%
GTGGATTTGGAAAACAATCA+AGG - tig0033439:22744-22763 Msa1451520:intron 35.0%
ACGAATCTTCAGAAGTTTCT+TGG + tig0033439:22793-22812 None:intergenic 35.0%
GAAGGTGATTGCGTAATTAA+TGG - tig0033439:22822-22841 Msa1451520:intron 35.0%
!! CAGGTTTGGTGTATGTTAAT+TGG - tig0033439:23102-23121 Msa1451520:CDS 35.0%
! TGACAGTAAGGTCAAGTTTT+TGG + tig0033439:23189-23208 None:intergenic 35.0%
ATGCGAAAAACATGACAGTA+AGG + tig0033439:23201-23220 None:intergenic 35.0%
!! TCTGTTCAACTTGTTCCTTT+TGG + tig0033439:23268-23287 None:intergenic 35.0%
CTAGCCATACTATGCTTATT+AGG + tig0033439:23320-23339 None:intergenic 35.0%
ATAGTATGGCTAGAGAATGT+AGG - tig0033439:23327-23346 Msa1451520:intron 35.0%
AATTGGGAAGATAAAGACCA+AGG - tig0033439:23388-23407 Msa1451520:intron 35.0%
!! AGACCAAGGTTGATATCATA+TGG - tig0033439:23402-23421 Msa1451520:intron 35.0%
TTGCCATATGATATCAACCT+TGG + tig0033439:23408-23427 None:intergenic 35.0%
CAAAATGGGGAACATACTTT+GGG - tig0033439:23425-23444 Msa1451520:intron 35.0%
TTCACAGGAACTAAATTCTG+CGG + tig0033439:23458-23477 None:intergenic 35.0%
! TTTTCCATCACAAACTGATG+AGG + tig0033439:23506-23525 None:intergenic 35.0%
! CATCAGTTTGTGATGGAAAA+AGG - tig0033439:23506-23525 Msa1451520:CDS 35.0%
AAGTCTAGCAATCAAAGATG+GGG - tig0033439:23545-23564 Msa1451520:CDS 35.0%
CCAAAACAACAGGAAAAATC+TGG + tig0033439:23704-23723 None:intergenic 35.0%
!! CCAGATTTTTCCTGTTGTTT+TGG - tig0033439:23701-23720 Msa1451520:intron 35.0%
! TTTTGGCGATATTGTGTTCA+AGG - tig0033439:23718-23737 Msa1451520:intron 35.0%
!! TATTTTTCAGCTAGGTAACC+GGG + tig0033439:23758-23777 None:intergenic 35.0%
TTCAATGAGTGACTTGAATG+TGG - tig0033439:23787-23806 Msa1451520:intron 35.0%
!! ATTTGGTACAGGTTTTTCAG+AGG + tig0033439:23818-23837 None:intergenic 35.0%
AGTTATCCGAATAACTCTGT+AGG - tig0033439:23839-23858 Msa1451520:CDS 35.0%
CAGTTACCTACAGAGTTATT+CGG + tig0033439:23848-23867 None:intergenic 35.0%
GATGTTACTCGTGAAGTTTA+TGG - tig0033439:24012-24031 Msa1451520:CDS 35.0%
TTGCGCCCTATGAAATATTT+CGG - tig0033439:24056-24075 Msa1451520:CDS 35.0%
CCCTATGAAATATTTCGGAT+TGG - tig0033439:24061-24080 Msa1451520:CDS 35.0%
! TGAATCTCACTTTGATGATC+AGG - tig0033439:24302-24321 Msa1451520:CDS 35.0%
! GAATCTCACTTTGATGATCA+GGG - tig0033439:24303-24322 Msa1451520:CDS 35.0%
AATGCTGGAGAAAAGTTCAA+TGG + tig0033439:24409-24428 None:intergenic 35.0%
! ATGATGTCATGCCAAGTTTT+TGG + tig0033439:24446-24465 None:intergenic 35.0%
! CTTGGCATGACATCATTTTA+TGG - tig0033439:24450-24469 Msa1451520:intron 35.0%
CATTTCCCTCTTCAAATGTA+GGG + tig0033439:24491-24510 None:intergenic 35.0%
TCTTTCTTGTCGAGAAAATC+AGG + tig0033439:24516-24535 None:intergenic 35.0%
ACCGGAATAACTTCACAATA+TGG + tig0033439:24609-24628 None:intergenic 35.0%
TAAGAAAGATTGGGCGAAAA+AGG - tig0033439:24824-24843 Msa1451520:CDS 35.0%
!! GATAGCTGGTTGGTTTAATT+AGG + tig0033439:24927-24946 None:intergenic 35.0%
TATTTAGTGAGATAGCTGGT+TGG + tig0033439:24937-24956 None:intergenic 35.0%
TGCTTATTTAGTGAGATAGC+TGG + tig0033439:24941-24960 None:intergenic 35.0%
CCATTCTTTCTTCGAAAACA+CGG + tig0033439:25139-25158 None:intergenic 35.0%
! ATCCTAATTTGTATGAGTCG+GGG - tig0033439:25399-25418 Msa1451520:CDS 35.0%
!! AAGCCTTATTTCAATGAAGC+TGG - tig0033439:25539-25558 Msa1451520:CDS 35.0%
ATTTCTTAGTAGACCCAACA+TGG + tig0033439:25648-25667 None:intergenic 35.0%
!! TATAGTTATTTTACCTCCGG+CGG + tig0033439:25671-25690 None:intergenic 35.0%
CAGGAAGAATCAAAGTAAAG+AGG + tig0033439:25694-25713 None:intergenic 35.0%
TCTAGGAAATCATGTAGTCT+GGG + tig0033439:25728-25747 None:intergenic 35.0%
! TTCTAGGAAATCATGTAGTC+TGG + tig0033439:25729-25748 None:intergenic 35.0%
! ATTGTGATAGCAGCATTTTG+AGG - tig0033439:26189-26208 Msa1451520:CDS 35.0%
!!! TCACTTTTTTCACCTCCAAT+AGG + tig0033439:26289-26308 None:intergenic 35.0%
AAGTGAGCATGAAAACCAAA+AGG - tig0033439:26303-26322 Msa1451520:intron 35.0%
AGTGAGCATGAAAACCAAAA+GGG - tig0033439:26304-26323 Msa1451520:intron 35.0%
! CTTCGTCGAGTTTTCATTTT+TGG + tig0033439:26429-26448 None:intergenic 35.0%
TTACGACTCTGAATTGCCAA+AGG + tig0033439:22074-22093 None:intergenic 40.0%
ATTGCAATACATACGGACTC+TGG - tig0033439:22283-22302 Msa1451520:CDS 40.0%
TATGACAGGCATAGAGTTGA+TGG - tig0033439:22479-22498 Msa1451520:CDS 40.0%
! TCAGATGACTGATTCAGACT+GGG - tig0033439:22506-22525 Msa1451520:intron 40.0%
CAAATGTTCTCTCGAATGAG+AGG + tig0033439:22650-22669 None:intergenic 40.0%
!! CGTAAGTGTTGACGTATTAG+TGG - tig0033439:22725-22744 Msa1451520:intron 40.0%
AAGATTCGTTCCATTTCCGA+AGG - tig0033439:22804-22823 Msa1451520:intron 40.0%
TAAGTACGAGATCACTACCT+TGG - tig0033439:22908-22927 Msa1451520:intron 40.0%
ACATAGCCATCTAGCTGATT+TGG + tig0033439:23033-23052 None:intergenic 40.0%
CTAGATGGCTATGTGACAAT+TGG - tig0033439:23039-23058 Msa1451520:CDS 40.0%
TGGAGAGACAATCATGATGA+AGG - tig0033439:23059-23078 Msa1451520:CDS 40.0%
TGAAGGAACTGTTTGTTCTG+TGG - tig0033439:23076-23095 Msa1451520:CDS 40.0%
!! GTATGTTAATTGGCTTGCCT+CGG - tig0033439:23112-23131 Msa1451520:CDS 40.0%
ATTAGAACCTAAAGGAACCG+AGG + tig0033439:23132-23151 None:intergenic 40.0%
!!! TTTTTGGAATCTTGCCAGCA+TGG + tig0033439:23173-23192 None:intergenic 40.0%
! CATGTTTTTCGCATGCAAAC+TGG - tig0033439:23207-23226 Msa1451520:CDS 40.0%
AAGAAACCTCAACTCTAGCA+TGG - tig0033439:23352-23371 Msa1451520:intron 40.0%
ATTCATCCATGCTAGAGTTG+AGG + tig0033439:23361-23380 None:intergenic 40.0%
GCAAAATGGGGAACATACTT+TGG - tig0033439:23424-23443 Msa1451520:intron 40.0%
!! AAGATGGGGTGTCATTCTAT+CGG - tig0033439:23559-23578 Msa1451520:intron 40.0%
AGCATACGGTAAACGTACAA+TGG - tig0033439:23594-23613 Msa1451520:intron 40.0%
!! AAATCATCTGGCTTGGATGT+GGG + tig0033439:23629-23648 None:intergenic 40.0%
CACAATATCGCCAAAACAAC+AGG + tig0033439:23714-23733 None:intergenic 40.0%
!! TCGGATAACTGATTTGGTAC+AGG + tig0033439:23829-23848 None:intergenic 40.0%
TAACATTGCCAATACAGGAC+AGG + tig0033439:23874-23893 None:intergenic 40.0%
! TCCTGTATTGGCAATGTTAC+TGG - tig0033439:23875-23894 Msa1451520:intron 40.0%
ACCAGTAACATTGCCAATAC+AGG + tig0033439:23879-23898 None:intergenic 40.0%
TGGTTTCAAAGATGGTCATG+TGG - tig0033439:23895-23914 Msa1451520:intron 40.0%
TTTCAAAGATGGTCATGTGG+AGG - tig0033439:23898-23917 Msa1451520:intron 40.0%
! AAAAAGTTGAGGGCATACCT+TGG + tig0033439:23948-23967 None:intergenic 40.0%
!!! GGCGCTACATTATTTTGAAC+AGG - tig0033439:24033-24052 Msa1451520:CDS 40.0%
AAAAGTTCAATGGCAGCTTG+AGG + tig0033439:24399-24418 None:intergenic 40.0%
! CTTTTCTCCAGCATTAAAGC+CGG - tig0033439:24414-24433 Msa1451520:intron 40.0%
!! GCCAAGTTTTTGGAAAATGC+CGG + tig0033439:24436-24455 None:intergenic 40.0%
ACAGTCCCTACATTTGAAGA+GGG - tig0033439:24483-24502 Msa1451520:intron 40.0%
GCATTTCCCTCTTCAAATGT+AGG + tig0033439:24492-24511 None:intergenic 40.0%
CCATTGCTGTCTAAAGAAAC+CGG + tig0033439:24627-24646 None:intergenic 40.0%
ATGGTTCAGATCAGTTGAAG+CGG - tig0033439:24643-24662 Msa1451520:intron 40.0%
CTTAACCTACAAAGGAGCAA+TGG + tig0033439:24808-24827 None:intergenic 40.0%
! CGAAAAAGGTACAGCAAGAA+TGG - tig0033439:24838-24857 Msa1451520:CDS 40.0%
TCAATTAGCAGAAACTGCGA+TGG + tig0033439:25077-25096 None:intergenic 40.0%
! CCGTGTTTTCGAAGAAAGAA+TGG - tig0033439:25136-25155 Msa1451520:CDS 40.0%
AAGCTTACAGGTGGTTCATT+GGG + tig0033439:25251-25270 None:intergenic 40.0%
AAAGCTTACAGGTGGTTCAT+TGG + tig0033439:25252-25271 None:intergenic 40.0%
TACATTCGAAAGCTTACAGG+TGG + tig0033439:25260-25279 None:intergenic 40.0%
CCATCTGCAAGAGATTTCAA+AGG + tig0033439:25349-25368 None:intergenic 40.0%
!! CCTTTGAAATCTCTTGCAGA+TGG - tig0033439:25346-25365 Msa1451520:CDS 40.0%
TTCCCCGACTCATACAAATT+AGG + tig0033439:25404-25423 None:intergenic 40.0%
GTTTGAGTCTCCTAAATACG+TGG - tig0033439:25429-25448 Msa1451520:CDS 40.0%
CTAGGAAATCATGTAGTCTG+GGG + tig0033439:25727-25746 None:intergenic 40.0%
!!! ATAGCAGCATTTTGAGGCAT+TGG - tig0033439:26195-26214 Msa1451520:intron 40.0%
GCATGTAAGGCATATCTTGA+AGG - tig0033439:26259-26278 Msa1451520:intron 40.0%
TATCTTGAAGGAGCTCCTAT+TGG - tig0033439:26271-26290 Msa1451520:intron 40.0%
AAAATGCCTCAGCAAGCTTA+GGG + tig0033439:26369-26388 None:intergenic 40.0%
!! TGCTGAGGCATTTTCTGATA+AGG - tig0033439:26375-26394 Msa1451520:intron 40.0%
!! GCTGAGGCATTTTCTGATAA+GGG - tig0033439:26376-26395 Msa1451520:intron 40.0%
AAACCTTGTGGTGTGTCATA+TGG - tig0033439:26564-26583 Msa1451520:CDS 40.0%
! CTCAGATGACTGATTCAGAC+TGG - tig0033439:22505-22524 Msa1451520:intron 45.0%
!! GTTTAGAGGAAAGCATCGGT+AGG - tig0033439:22613-22632 Msa1451520:intron 45.0%
TACGCAATCACCTTCGGAAA+TGG + tig0033439:22817-22836 None:intergenic 45.0%
! ATTGCGTAATTAATGGGCCG+TGG - tig0033439:22829-22848 Msa1451520:intron 45.0%
TCGCAGTATCCATACTATCC+AGG - tig0033439:22975-22994 Msa1451520:intron 45.0%
CGCAGTATCCATACTATCCA+GGG - tig0033439:22976-22995 Msa1451520:intron 45.0%
CTGCTTCCAAATCAGCTAGA+TGG - tig0033439:23024-23043 Msa1451520:CDS 45.0%
ACTGTTTGTTCTGTGGAAGC+AGG - tig0033439:23083-23102 Msa1451520:CDS 45.0%
TTGTTCTGTGGAAGCAGGTT+TGG - tig0033439:23088-23107 Msa1451520:CDS 45.0%
! TGTTCCTTTTGGTCTGCAAC+TGG + tig0033439:23257-23276 None:intergenic 45.0%
TTGGCCTCATCAGTTTGTGA+TGG - tig0033439:23499-23518 Msa1451520:CDS 45.0%
! GGTCGATGCAAAAGAGCATA+CGG - tig0033439:23580-23599 Msa1451520:intron 45.0%
!! CAAATCATCTGGCTTGGATG+TGG + tig0033439:23630-23649 None:intergenic 45.0%
CACATCCAAGCCAGATGATT+TGG - tig0033439:23628-23647 Msa1451520:intron 45.0%
TGGCGATATTGTGTTCAAGG+CGG - tig0033439:23721-23740 Msa1451520:intron 45.0%
AACTGTCACCTGTCCTGTAT+TGG - tig0033439:23863-23882 Msa1451520:intron 45.0%
ATGGTCATGTGGAGGTGAAA+TGG - tig0033439:23906-23925 Msa1451520:intron 45.0%
TGGTCATGTGGAGGTGAAAT+GGG - tig0033439:23907-23926 Msa1451520:intron 45.0%
!! GGCTACTGGTTTAATGACCA+AGG - tig0033439:23928-23947 Msa1451520:intron 45.0%
TGACCAGAAGGGAAAGGTAA+GGG - tig0033439:24177-24196 Msa1451520:CDS 45.0%
TTTCCCTTACCTTTCCCTTC+TGG + tig0033439:24183-24202 None:intergenic 45.0%
!! GAAAATGCCGGCTTTAATGC+TGG + tig0033439:24424-24443 None:intergenic 45.0%
! GCCGGCATTTTCCAAAAACT+TGG - tig0033439:24432-24451 Msa1451520:intron 45.0%
CTCTTCAAATGTAGGGACTG+TGG + tig0033439:24484-24503 None:intergenic 45.0%
CACAGTCCCTACATTTGAAG+AGG - tig0033439:24482-24501 Msa1451520:intron 45.0%
CCGGTTTCTTTAGACAGCAA+TGG - tig0033439:24624-24643 Msa1451520:CDS 45.0%
AAAAGGGTTGCCGATATCTC+AGG - tig0033439:24713-24732 Msa1451520:intron 45.0%
CTACAAAGGAGCAATGGAGA+GGG + tig0033439:24802-24821 None:intergenic 45.0%
ATCCTGGAGAAAAACCTTCC+TGG - tig0033439:24864-24883 Msa1451520:CDS 45.0%
TAAAGTGTGAAGTACGCACC+AGG + tig0033439:24885-24904 None:intergenic 45.0%
TCAGGGACACCTTATCATGA+CGG - tig0033439:25188-25207 Msa1451520:CDS 45.0%
AGGTGGTTCATTGGGATACT+CGG + tig0033439:25243-25262 None:intergenic 45.0%
CAGATGGTGCACTACATTTC+TGG - tig0033439:25362-25381 Msa1451520:CDS 45.0%
! ATGGTGCACTACATTTCTGG+CGG - tig0033439:25365-25384 Msa1451520:CDS 45.0%
AGTCTCCTAAATACGTGGAG+TGG - tig0033439:25434-25453 Msa1451520:CDS 45.0%
GAAGAACTGTGGAAGATCCA+GGG + tig0033439:25481-25500 None:intergenic 45.0%
TGAAGAACTGTGGAAGATCC+AGG + tig0033439:25482-25501 None:intergenic 45.0%
GAGAAGGACTTGAAGAACTG+TGG + tig0033439:25492-25511 None:intergenic 45.0%
GCTGGATATGACCAACAGAT+TGG - tig0033439:25557-25576 Msa1451520:CDS 45.0%
CTTCAGCTCTACCAATCTGT+TGG + tig0033439:25571-25590 None:intergenic 45.0%
CAACAGATTGGTAGAGCTGA+AGG - tig0033439:25569-25588 Msa1451520:CDS 45.0%
CTCACCTGCAAATCCATGTT+GGG - tig0033439:25632-25651 Msa1451520:CDS 45.0%
TAGACCCAACATGGATTTGC+AGG + tig0033439:25639-25658 None:intergenic 45.0%
! AGTCTGGGGTGTTATAGTAC+AGG + tig0033439:25713-25732 None:intergenic 45.0%
TACTCTTATTCCACTTGGGG+AGG + tig0033439:26073-26092 None:intergenic 45.0%
AACCAAAAGGGAACTTCGAC+AGG - tig0033439:26316-26335 Msa1451520:intron 45.0%
! ATCCTGTCGAAGTTCCCTTT+TGG + tig0033439:26321-26340 None:intergenic 45.0%
GAAAATGCCTCAGCAAGCTT+AGG + tig0033439:26370-26389 None:intergenic 45.0%
CGAAGTTGAGTTCACCATCA+AGG - tig0033439:26444-26463 Msa1451520:intron 45.0%
GAGTTCACCATCAAGGTTTC+TGG - tig0033439:26451-26470 Msa1451520:intron 45.0%
GTTGGAACCAGAAACCTTGA+TGG + tig0033439:26461-26480 None:intergenic 45.0%
AAGCCATATGACACACCACA+AGG + tig0033439:26570-26589 None:intergenic 45.0%
TCCAGTTATCCCTGTCCTGT+CGG - tig0033439:22099-22118 Msa1451520:three_prime_UTR 50.0%
TGCTCCTTATCAGACCCATC+TGG - tig0033439:22687-22706 Msa1451520:intron 50.0%
CTGTCCAGATGGGTCTGATA+AGG + tig0033439:22694-22713 None:intergenic 50.0%
ATCAGACCCATCTGGACAGA+TGG - tig0033439:22695-22714 Msa1451520:intron 50.0%
TCAGACCCATCTGGACAGAT+GGG - tig0033439:22696-22715 Msa1451520:intron 50.0%
! GTAATTAATGGGCCGTGGCT+TGG - tig0033439:22834-22853 Msa1451520:intron 50.0%
CTTTGAACCTGACCAAGCCA+CGG + tig0033439:22849-22868 None:intergenic 50.0%
!! GTGGCTTGGTCAGGTTCAAA+GGG - tig0033439:22848-22867 Msa1451520:intron 50.0%
ACTCTCTGCCCTGGATAGTA+TGG + tig0033439:22987-23006 None:intergenic 50.0%
TTAACCTTCACTCTCTGCCC+TGG + tig0033439:22996-23015 None:intergenic 50.0%
!! AGCTGATTTGGAAGCAGTCG+AGG + tig0033439:23021-23040 None:intergenic 50.0%
ATGTGAACACTCCTCCATGC+TGG - tig0033439:23156-23175 Msa1451520:CDS 50.0%
TTGGAATCTTGCCAGCATGG+AGG + tig0033439:23170-23189 None:intergenic 50.0%
TCGCATGCAAACTGGCAACT+TGG - tig0033439:23215-23234 Msa1451520:CDS 50.0%
! CAAACTGGCAACTTGGTGAC+TGG - tig0033439:23222-23241 Msa1451520:CDS 50.0%
GCTTCCAGTTGCAGACCAAA+AGG - tig0033439:23250-23269 Msa1451520:CDS 50.0%
! TCCAAGCCAGATGATTTGGC+TGG - tig0033439:23632-23651 Msa1451520:intron 50.0%
TCCAGCCAAATCATCTGGCT+TGG + tig0033439:23636-23655 None:intergenic 50.0%
GGTTCTCCAGCCAAATCATC+TGG + tig0033439:23641-23660 None:intergenic 50.0%
GCACTCACAGTTTCTGTCGT+TGG + tig0033439:23662-23681 None:intergenic 50.0%
TGGGTGCTCAACAAGTTCGT+AGG + tig0033439:23684-23703 None:intergenic 50.0%
AAGTCTGCCTTCTGACCAGA+AGG - tig0033439:24165-24184 Msa1451520:CDS 50.0%
AGTCTGCCTTCTGACCAGAA+GGG - tig0033439:24166-24185 Msa1451520:CDS 50.0%
ACCTTTCCCTTCTGGTCAGA+AGG + tig0033439:24175-24194 None:intergenic 50.0%
CTGACCAGAAGGGAAAGGTA+AGG - tig0033439:24176-24195 Msa1451520:CDS 50.0%
TTCAATGGCAGCTTGAGGCA+GGG + tig0033439:24394-24413 None:intergenic 50.0%
CAGGATGTGAATCGGTCTCA+GGG + tig0033439:24554-24573 None:intergenic 50.0%
CCTACAAAGGAGCAATGGAG+AGG + tig0033439:24803-24822 None:intergenic 50.0%
CCTCTCCATTGCTCCTTTGT+AGG - tig0033439:24800-24819 Msa1451520:CDS 50.0%
! ACAGCAAGAATGGAGCATCC+TGG - tig0033439:24848-24867 Msa1451520:CDS 50.0%
! CACCAGGAAGGTTTTTCTCC+AGG + tig0033439:24869-24888 None:intergenic 50.0%
GTTCATTGGGATACTCGGGA+GGG + tig0033439:25238-25257 None:intergenic 50.0%
GGTGGTTCATTGGGATACTC+GGG + tig0033439:25242-25261 None:intergenic 50.0%
CGGTACCACTCCACGTATTT+AGG + tig0033439:25442-25461 None:intergenic 50.0%
TCAAGTCCTTCTCTCTCTGC+AGG - tig0033439:25499-25518 Msa1451520:CDS 50.0%
ACATGGATTTGCAGGTGAGG+AGG + tig0033439:25631-25650 None:intergenic 50.0%
CCAACATGGATTTGCAGGTG+AGG + tig0033439:25634-25653 None:intergenic 50.0%
CCTCACCTGCAAATCCATGT+TGG - tig0033439:25631-25650 Msa1451520:CDS 50.0%
GGGTCTACTAAGAAATCCGC+CGG - tig0033439:25652-25671 Msa1451520:CDS 50.0%
TCTACTAAGAAATCCGCCGG+AGG - tig0033439:25655-25674 Msa1451520:CDS 50.0%
TGAGATGTGTGCATGACCCT+TGG - tig0033439:25827-25846 Msa1451520:CDS 50.0%
GGGGAGGATCCGAAAAGATA+AGG + tig0033439:26057-26076 None:intergenic 50.0%
!!! GCAGCATTTTGAGGCATTGG+TGG - tig0033439:26198-26217 Msa1451520:intron 50.0%
CTTGAAGGAGCTCCTATTGG+AGG - tig0033439:26274-26293 Msa1451520:intron 50.0%
CCAGTTATCCCTGTCCTGTC+GGG - tig0033439:22100-22119 Msa1451520:three_prime_UTR 55.0%
GAGATTTGCCCGACAGGACA+GGG + tig0033439:22111-22130 None:intergenic 55.0%
CCAAAGGAGATTTGCCCGAC+AGG + tig0033439:22117-22136 None:intergenic 55.0%
CCTGTCGGGCAAATCTCCTT+TGG - tig0033439:22114-22133 Msa1451520:three_prime_UTR 55.0%
GAGTCTTCCAGTGAGAGCAG+CGG - tig0033439:22528-22547 Msa1451520:intron 55.0%
CAGCGGTAGTGACGATCAAG+AGG - tig0033439:22545-22564 Msa1451520:intron 55.0%
CAGACCCATCTGGACAGATG+GGG - tig0033439:22697-22716 Msa1451520:intron 55.0%
!! CGTGGCTTGGTCAGGTTCAA+AGG - tig0033439:22847-22866 Msa1451520:intron 55.0%
GCTTGGTCAGGTTCAAAGGG+TGG - tig0033439:22851-22870 Msa1451520:intron 55.0%
TGGTCAGGTTCAAAGGGTGG+TGG - tig0033439:22854-22873 Msa1451520:intron 55.0%
CTATCCAGGGCAGAGAGTGA+AGG - tig0033439:22989-23008 Msa1451520:intron 55.0%
! TGGCTTGCCTCGGTTCCTTT+AGG - tig0033439:23122-23141 Msa1451520:CDS 55.0%
AAGGCGGCTCAAAAACAGCC+CGG - tig0033439:23737-23756 Msa1451520:intron 55.0%
!! GTGGAGGTGAAATGGGCTAC+TGG - tig0033439:23914-23933 Msa1451520:intron 55.0%
GCCTTCTGACCAGAAGGGAA+AGG - tig0033439:24171-24190 Msa1451520:CDS 55.0%
GTTCAATGGCAGCTTGAGGC+AGG + tig0033439:24395-24414 None:intergenic 55.0%
GCAGGATGTGAATCGGTCTC+AGG + tig0033439:24555-24574 None:intergenic 55.0%
CGTGCTCGCAGGATGTGAAT+CGG + tig0033439:24562-24581 None:intergenic 55.0%
GTGTGAAGTACGCACCAGGA+AGG + tig0033439:24881-24900 None:intergenic 55.0%
GGTTCATTGGGATACTCGGG+AGG + tig0033439:25239-25258 None:intergenic 55.0%
AGGGTTCCACACTTCAGTCG+CGG + tig0033439:25462-25481 None:intergenic 55.0%
CAAGAGCCTGCAGAGAGAGA+AGG + tig0033439:25508-25527 None:intergenic 55.0%
! CTTTTCGGATCCTCCCCAAG+TGG - tig0033439:26060-26079 Msa1451520:CDS 55.0%
!! ACTCCTCCCTAAGCTTGCTG+AGG - tig0033439:26360-26379 Msa1451520:intron 55.0%
ATGCCTCAGCAAGCTTAGGG+AGG + tig0033439:26366-26385 None:intergenic 55.0%
CCCGACAGGACAGGGATAAC+TGG + tig0033439:22103-22122 None:intergenic 60.0%
GGAGATTTGCCCGACAGGAC+AGG + tig0033439:22112-22131 None:intergenic 60.0%
GTCACTACCGCTGCTCTCAC+TGG + tig0033439:22538-22557 None:intergenic 60.0%
ACCCATCTGGACAGATGGGG+AGG - tig0033439:22700-22719 Msa1451520:intron 60.0%
CCCTCCCCATCTGTCCAGAT+GGG + tig0033439:22704-22723 None:intergenic 60.0%
CCCATCTGGACAGATGGGGA+GGG - tig0033439:22701-22720 Msa1451520:intron 60.0%
ACCCTCCCCATCTGTCCAGA+TGG + tig0033439:22705-22724 None:intergenic 60.0%
!! TAATGGGCCGTGGCTTGGTC+AGG - tig0033439:22839-22858 Msa1451520:intron 60.0%
GTAGACTGCAACGTGCTCGC+AGG + tig0033439:24573-24592 None:intergenic 60.0%
CTCATGCGAGCAGCCATCGT+TGG - tig0033439:25161-25180 Msa1451520:CDS 60.0%
CAGCCATCGTTGGTGCGTCA+GGG - tig0033439:25171-25190 Msa1451520:CDS 60.0%
TGTCCCTGACGCACCAACGA+TGG + tig0033439:25177-25196 None:intergenic 60.0%
GTGGTACCGCGACTGAAGTG+TGG - tig0033439:25453-25472 Msa1451520:CDS 60.0%
GCGACTGAAGTGTGGAACCC+TGG - tig0033439:25461-25480 Msa1451520:CDS 60.0%
GCAGCCATCGTTGGTGCGTC+AGG - tig0033439:25170-25189 Msa1451520:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0033439 gene 22059 26641 22059 ID=Msa1451520;Name=Msa1451520
tig0033439 mRNA 22059 26641 22059 ID=Msa1451520-mRNA-1;Parent=Msa1451520;Name=Msa1451520-mRNA-1;_AED=0.17;_eAED=0.21;_QI=0|0.85|0.87|1|1|1|8|206|971
tig0033439 exon 22059 22498 22059 ID=Msa1451520-mRNA-1:exon:18082;Parent=Msa1451520-mRNA-1
tig0033439 exon 23024 23335 23024 ID=Msa1451520-mRNA-1:exon:18081;Parent=Msa1451520-mRNA-1
tig0033439 exon 23438 23577 23438 ID=Msa1451520-mRNA-1:exon:18080;Parent=Msa1451520-mRNA-1
tig0033439 exon 23815 23878 23815 ID=Msa1451520-mRNA-1:exon:18079;Parent=Msa1451520-mRNA-1
tig0033439 exon 23966 24376 23966 ID=Msa1451520-mRNA-1:exon:18078;Parent=Msa1451520-mRNA-1
tig0033439 exon 24508 24645 24508 ID=Msa1451520-mRNA-1:exon:18077;Parent=Msa1451520-mRNA-1
tig0033439 exon 24751 26213 24751 ID=Msa1451520-mRNA-1:exon:18076;Parent=Msa1451520-mRNA-1
tig0033439 exon 26488 26641 26488 ID=Msa1451520-mRNA-1:exon:18075;Parent=Msa1451520-mRNA-1
tig0033439 CDS 26488 26641 26488 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 24751 26213 24751 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 24508 24645 24508 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 23966 24376 23966 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 23815 23878 23815 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 23438 23577 23438 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 23024 23335 23024 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 CDS 22265 22498 22265 ID=Msa1451520-mRNA-1:cds;Parent=Msa1451520-mRNA-1
tig0033439 three_prime_UTR 22059 22264 22059 ID=Msa1451520-mRNA-1:three_prime_utr;Parent=Msa1451520-mRNA-1
Gene Sequence

>Msa1451520

CTGGGCAAATCTCCTTTGGCAATTCAGAGTCGTAATAGACTCCAGTTATCCCTGTCCTGTCGGGCAAATCTCCTTTGGCATTTAATTTTCAGTTTCAGTGGTGAAGGTATTCTTCCGTTTCAAGAAACTAGCTTTGTATCTGTGACAAGCATAGGCATAGAGTTGATGGAAGCTCAGATGACTGATTCAGACTGGGAGTCTTCCAGTGAGAGCAGCGGTAGTGACGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAGACGATTTCCTCTCATTCGAGAGAACATTTGCTTACGGCGATGTTGTGTGCTCCTTATCAGACCCATCTGGACAGATGGGGAGGGTCGTAAGTGTTGACGTATTAGTGGATTTGGAAAACAATCAAGGAAATGTGTTAAAAAATGTGAACTCCAAGAAACTTCTGAAGATTCGTTCCATTTCCGAAGGTGATTGCGTAATTAATGGGCCGTGGCTTGGTCAGGTTCAAAGGGTGGTGGACAGATTAAGTGTATTGTTTGATGACGGGACTAAGTACGAGATCACTACCTTGGAAAATGATAAGATTTTACCACAAAATCCTAATTTTCTTGAAGATTCGCAGTATCCATACTATCCAGGGCAGAGAGTGAAGGTTAAGTCCTCGACTGCTTCCAAATCAGCTAGATGGCTATGTGACAATTGGAGAGACAATCATGATGAAGGAACTGTTTGTTCTGTGGAAGCAGGTTTGGTGTATGTTAATTGGCTTGCCTCGGTTCCTTTAGGTTCTAATTCAAATGTGAACACTCCTCCATGCTGGCAAGATTCCAAAAACTTGACCTTACTGTCATGTTTTTCGCATGCAAACTGGCAACTTGGTGACTGGTGTATGCTTCCAGTTGCAGACCAAAAGGAACAAGTTGAACAGATGATTCGAGATTCATCAGATAGTTATCTTCCTAATAAGCATAGTATGGCTAGAGAATGTAGGAGAAGAAACCTCAACTCTAGCATGGATGAATTGTTTATAATTGGGAAGATAAAGACCAAGGTTGATATCATATGGCAAAATGGGGAACATACTTTGGGCTCAGATCCGCAGAATTTAGTTCCTGTGAATGTCATAAATACTCATGAATTTTGGCCTCATCAGTTTGTGATGGAAAAAGGTACTTCTGATGATGATAAGTCTAGCAATCAAAGATGGGGTGTCATTCTATCGGTCGATGCAAAAGAGCATACGGTAAACGTACAATGGAGAACAGCTCCCACATCCAAGCCAGATGATTTGGCTGGAGAACCAACGACAGAAACTGTGAGTGCCTACGAACTTGTTGAGCACCCAGATTTTTCCTGTTGTTTTGGCGATATTGTGTTCAAGGCGGCTCAAAAACAGCCCGGTTACCTAGCTGAAAAATATAATGCAAATTCAATGAGTGACTTGAATGTGGAAGCTCCTCTGAAAAACCTGTACCAAATCAGTTATCCGAATAACTCTGTAGGTAACTGTCACCTGTCCTGTATTGGCAATGTTACTGGTTTCAAAGATGGTCATGTGGAGGTGAAATGGGCTACTGGTTTAATGACCAAGGTTGCGCCCTATGAAATATTTCGGATTGGTAAACATGAAGCTTCGACTGTAACTCCTGTTTCTTATGAAACAAATATTGAGGAGTTGGTTGAAGAGATTACTGAACATGTAAGTCTGCCTTCTGACCAGAAGGGAAAGGGCTTGTCAGATTGTAACAGTGATAGAGATAAATGTGAAAAGCATCAAGGAGAGAGTAGTTCGTTTTCCCTGCCTCAAGCTGCCATTGAACTTTTCTCCAGCATTAAAGCCGGCATTTTCCAAAAACTTGGCATGACATCATTTTATGGAGCTGTTTCCACAGTCCCTACATTTGAAGAGGGAAATGCACCTGATTTTCTCGACAAGAAAGATTTGGAAACTTGTGGCCCTGAGACCGATTCACATCCTGCGAGCACGTTGCAGTCTACTGAAAACCCAACTCCATATTGTGAAGTTATTCCGGTTTCTTTAGACAGCAATGGTTCAGATCAGTTGAAGCGGTTTGATGTAATTGATACTTGTTCAGATCACCACTTTTTCAATGAGAGAAAAGGGTTGCCGATATCTCAGGTTAAGAAAGATTGGGCGAAAAAGGTACAGCAAGAATGGAGCATCCTGGAGAAAAACCTTCCTGAAACTATTTATGTCCGTGTTTTCGAAGAAAGAATGGATCTCATGCGAGCAGCCATCGTTGGTGCGTCAGGGACACCTTATCATGACGGATTGTTTTTCTTCGATATATGTTTCCCTCCCGAGTATCCCAATGAACCACCTATGGTGCACTACATTTCTGGCGGATTAAGAATAAATCCTAATTTGTATGAGTCGGGGAAAGTGTGTTTGAGTCTCCTAAATACGTGGAGTGGTACCGCGACTGAAGTGTGGAACCCTGGATCTTCCACAGTTCTTCAAGTCCTTCTCTCTCTGCAGGCTCTTGTCCTTAACGAAAAGCCTTATTTCAATGAAGCTGGATATGACCAACAGATTGGTAGAGCTGAAGGAGAGAAAAATTCTGTGAGTTACAATGAGAATGCTTTCCTCCTCACCTGCAAATCCATGTTGGGTCTACTAAGAAATCCGCCGGAGCATTTTGAGGCATTGGTGGAAGAACACTTTCGACAACGCTCAAAACATATACTTGTTGCATGTAAGGCATATCTTGAAGGAGCTCCTATTGGAGGTGAAAAAAGTGAGCATGAAAACCAAAAGGGAACTTCGACAGGATTTAAAATTATGCTTGGTAAACTCCTCCCTAAGCTTGCTGAGGCATTTTCTGATAAGGGAATTGATTGCTCCCAGTTTGTTGACATCCAAAAATGA
Protein sequence

>Msa1451520

LGKSPLAIQSRNRLQLSLSCRANLLWHLIFSFSGEGILPFQETSFVSVTSIGIELMEAQMTDSDWESSSESSGSDDQEDIDFLYGGQAQSILSSLEESIGRIDDFLSFERTFAYGDVVCSLSDPSGQMGRVVSVDVLVDLENNQGNVLKNVNSKKLLKIRSISEGDCVINGPWLGQVQRVVDRLSVLFDDGTKYEITTLENDKILPQNPNFLEDSQYPYYPGQRVKVKSSTASKSARWLCDNWRDNHDEGTVCSVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFSHANWQLGDWCMLPVADQKEQVEQMIRDSSDSYLPNKHSMARECRRRNLNSSMDELFIIGKIKTKVDIIWQNGEHTLGSDPQNLVPVNVINTHEFWPHQFVMEKGTSDDDKSSNQRWGVILSVDAKEHTVNVQWRTAPTSKPDDLAGEPTTETVSAYELVEHPDFSCCFGDIVFKAAQKQPGYLAEKYNANSMSDLNVEAPLKNLYQISYPNNSVGNCHLSCIGNVTGFKDGHVEVKWATGLMTKVAPYEIFRIGKHEASTVTPVSYETNIEELVEEITEHVSLPSDQKGKGLSDCNSDRDKCEKHQGESSSFSLPQAAIELFSSIKAGIFQKLGMTSFYGAVSTVPTFEEGNAPDFLDKKDLETCGPETDSHPASTLQSTENPTPYCEVIPVSLDSNGSDQLKRFDVIDTCSDHHFFNERKGLPISQVKKDWAKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDICFPPEYPNEPPMVHYISGGLRINPNLYESGKVCLSLLNTWSGTATEVWNPGSSTVLQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLLTCKSMLGLLRNPPEHFEALVEEHFRQRSKHILVACKAYLEGAPIGGEKSEHENQKGTSTGFKIMLGKLLPKLAEAFSDKGIDCSQFVDIQK*