AlfalfaGEDB | Msa0165410

M. sativa cultivar zhongmu-4 / Msa0165410

KEGG: -
GO: GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009987 GO:0010073 GO:0010074 GO:0010199 GO:0010467 GO:0010492 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019827 GO:0022414 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048441 GO:0048465 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048832 GO:0048833 GO:0048834 GO:0048856 GO:0048859 GO:0050789 GO:0050793 GO:0050896 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0090691 GO:0090698 GO:0097659 GO:0098727 GO:0099402 GO:1901360 GO:1901362 GO:1901576
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0165410	XP_013468475.1	97.778	225	2	1	1	225	1	222	2.05e-160	452

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0165410	sp\|O82268\|LSH3_ARATH	75.000	188	39	3	1	183	1	185	1.85e-85	255

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0165410	A0A072VL17	97.778	225	2	1	1	225	1	222	9.78e-161	452

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0024550	Msa0165410	0.813454	2.539135e-51	-8.615850e-47
Msa0092080	Msa0165410	0.985889	5.440473e-165	-8.615850e-47
Msa0120400	Msa0165410	0.812129	4.952899e-51	-8.615850e-47
Msa0123190	Msa0165410	0.969842	1.015058e-130	-8.615850e-47
Msa0165410	Msa0167740	0.981957	7.171700e-154	-8.615850e-47
Msa0165410	Msa0167770	0.985427	1.560637e-163	-8.615850e-47
Msa0165410	Msa0239030	0.813807	2.122691e-51	-8.615850e-47
Msa0165410	Msa0276740	0.803096	4.104041e-49	-8.615850e-47
Msa0165410	Msa0316680	0.803955	2.722560e-49	-8.615850e-47
Msa0165410	Msa0660480	0.982542	2.321302e-155	-8.615850e-47
Msa0165410	Msa0967380	0.804444	2.154039e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0165410	MtrunA17_Chr1g0183761	97.706	218	2	1	8	225	1	215	2.82e-158	436
Msa0165410	MtrunA17_Chr7g0261381	76.289	194	34	2	1	182	1	194	1.03e-90	265
Msa0165410	MtrunA17_Chr1g0167411	95.200	125	6	0	52	176	65	189	1.98e-89	262
Msa0165410	MtrunA17_Chr1g0187671	80.925	173	28	2	13	182	13	183	4.29e-87	256
Msa0165410	MtrunA17_Chr4g0051251	83.212	137	23	0	51	187	45	181	6.06e-85	251
Msa0165410	MtrunA17_Chr5g0431211	78.322	143	29	1	41	183	28	168	4.67e-83	246
Msa0165410	MtrunA17_Chr3g0105921	81.818	132	24	0	52	183	42	173	1.07e-72	220
Msa0165410	MtrunA17_Chr2g0325831	75.182	137	32	1	39	175	12	146	1.73e-72	218
Msa0165410	MtrunA17_Chr4g0041141	67.105	152	50	0	24	175	1	152	2.44e-72	218
Msa0165410	MtrunA17_Chr7g0274631	66.879	157	48	3	28	183	5	158	1.98e-71	215
Msa0165410	MtrunA17_Chr2g0283861	72.143	140	39	0	43	182	26	165	6.67e-71	214
Msa0165410	MtrunA17_Chr2g0315791	75.000	132	33	0	51	182	32	163	1.10e-69	211
Msa0165410	MtrunA17_Chr1g0190231	83.200	125	21	0	52	176	40	164	1.05e-68	208
Msa0165410	MtrunA17_Chr8g0379061	72.800	125	34	0	51	175	84	208	8.03e-55	175
Msa0165410	MtrunA17_Chr1g0211641	91.111	45	4	0	46	90	65	109	3.86e-24	92.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0165410	AT2G31160.1	75.000	188	39	3	1	183	1	185	1.88e-86	255
Msa0165410	AT1G07090.1	70.625	160	47	0	39	198	18	177	1.61e-83	247
Msa0165410	AT3G23290.2	93.651	126	8	0	51	176	47	172	1.73e-78	234
Msa0165410	AT5G58500.1	79.104	134	27	1	51	183	18	151	4.59e-78	233
Msa0165410	AT2G42610.1	75.524	143	35	0	41	183	14	156	3.43e-73	220
Msa0165410	AT2G42610.2	75.524	143	35	0	41	183	14	156	3.43e-73	220
Msa0165410	AT5G28490.1	83.459	133	22	0	49	181	22	154	5.10e-71	215
Msa0165410	AT3G04510.1	77.778	135	30	0	52	186	33	167	6.98e-69	210
Msa0165410	AT1G78815.1	67.200	125	41	0	51	175	39	163	1.05e-61	191
Msa0165410	AT4G18610.1	69.048	126	38	1	51	175	36	161	5.86e-61	189
Msa0165410	AT1G16910.1	62.121	132	50	0	49	180	20	151	1.32e-57	180

Find 85 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTTTGATGTACTAATAATT+TGG	0.131133	1_4:+45953049	None:intergenic
GCACCAAATGGATTTGTTTC+TGG	0.131233	1_4:+45951979	None:intergenic
TGTTCCAGTCACGGCGTTTC+TGG	0.158859	1_4:+45952711	None:intergenic
ATGCACTGATAGGTCGTTTA+AGG	0.159661	1_4:-45952029	Msa0165410:CDS
TAATGACAACATTTAATTAA+TGG	0.175719	1_4:-45951503	Msa0165410:three_prime_UTR
CTACCCCAAGCTTGTCTTAA+TGG	0.193812	1_4:+45952057	None:intergenic
CGCCGTGACTGGAACACTTT+TGG	0.268565	1_4:-45952704	Msa0165410:CDS
GTTTGATGTACTAATAATTT+GGG	0.281139	1_4:+45953050	None:intergenic
ACACCGATTTGTCCATTCTA+TGG	0.288093	1_4:-45952111	Msa0165410:CDS
CTAGAAAAGGATTCAATCTA+TGG	0.293528	1_4:-45952894	Msa0165410:exon
GTTGGTAGCTCTTCACCTTC+TGG	0.302723	1_4:-45952764	Msa0165410:CDS
TAGTAGTAGCTAGTAGGTTT+AGG	0.306816	1_4:-45951650	Msa0165410:three_prime_UTR
TGTAGGTACTTGGACCAATT+TGG	0.320730	1_4:-45952150	Msa0165410:intron
CCAGGTGCAACTCAATAAAA+TGG	0.335707	1_4:-45951754	Msa0165410:exon
AAAGGAAACAAACTCTGATT+TGG	0.342923	1_4:+45953168	None:intergenic
TCACTCTGGTCACTGTCTTT+AGG	0.344089	1_4:-45952972	Msa0165410:five_prime_UTR
ATAACTAATACCTCTTGCTT+TGG	0.355096	1_4:+45951912	None:intergenic
GGACATGGTGCTGGAGGGTT+TGG	0.355681	1_4:+45952084	None:intergenic
GAGTGAGGGAGTGAGAATAT+AGG	0.363658	1_4:+45952993	None:intergenic
TTGAAGAGATAGATGGTATA+TGG	0.385717	1_4:+45953238	None:intergenic
ATGTCCATTAAGACAAGCTT+GGG	0.387177	1_4:-45952061	Msa0165410:CDS
GTTGCTGCTGTGGGTAGTTA+TGG	0.388764	1_4:+45952808	None:intergenic
AAGTACTAGTAGTAGCTAGT+AGG	0.399769	1_4:-45951656	Msa0165410:three_prime_UTR
CTCATGTTCTTGAATTTCTC+CGG	0.420657	1_4:-45952628	Msa0165410:intron
TGCACTGATAGGTCGTTTAA+GGG	0.427076	1_4:-45952028	Msa0165410:CDS
AGGTGAAGAGCTACCAACTA+TGG	0.428010	1_4:+45952769	None:intergenic
AGAGAAATTGAAGAGATAGA+TGG	0.429616	1_4:+45953231	None:intergenic
TTAGTTATGAGAAGAAGAAA+AGG	0.431228	1_4:-45951897	Msa0165410:CDS
AAAACCAGAAACGCCGTGAC+TGG	0.451024	1_4:-45952715	Msa0165410:CDS
GACGGTGATTCTTGAGGTAC+TGG	0.454610	1_4:+45952681	None:intergenic
CTAACAGCTCTAGCACCAAA+TGG	0.473078	1_4:+45951967	None:intergenic
TGCTGAAGCTGAAGCTGTTG+TGG	0.480517	1_4:+45951853	None:intergenic
GAGGGAGTGAGAATATAGGA+TGG	0.481699	1_4:+45952997	None:intergenic
AAGCCAGAAACAAATCCATT+TGG	0.482999	1_4:-45951982	Msa0165410:CDS
AGCTGTTGTGGTTGTTGTTG+TGG	0.487063	1_4:+45951865	None:intergenic
TGATGGTGTTGTTGCTGCTG+TGG	0.491697	1_4:+45952798	None:intergenic
TCTGAAAATTAAGCTAGAAA+AGG	0.492970	1_4:-45952907	Msa0165410:five_prime_UTR
GAGATAGATGGTATATGGTA+TGG	0.493261	1_4:+45953243	None:intergenic
TACCTTGAAAGAAAATGAAA+AGG	0.507170	1_4:+45953150	None:intergenic
TATTGAGTTGCACCTGGAGG+TGG	0.510921	1_4:+45951760	None:intergenic
GACAGTGACCAGAGTGAGTG+AGG	0.514785	1_4:+45952978	None:intergenic
CAACATCAGCTTCCACCTCC+AGG	0.518219	1_4:-45951772	Msa0165410:CDS
GGGTTTGGATGTCCATAGAA+TGG	0.522857	1_4:+45952099	None:intergenic
AATGGACATGGACATGGTGC+TGG	0.525882	1_4:+45952075	None:intergenic
CATGTCCATTAAGACAAGCT+TGG	0.527150	1_4:-45952062	Msa0165410:CDS
TCTTGCTTCACCACTTGAAG+AGG	0.527445	1_4:-45953267	Msa0165410:five_prime_UTR
GTGGGTAGTTATGGTGCTGT+TGG	0.531338	1_4:+45952817	None:intergenic
TGTCCATAGAATGGACAAAT+CGG	0.533345	1_4:+45952108	None:intergenic
AATATTGTGATGTAGGTACT+TGG	0.534027	1_4:-45952160	Msa0165410:intron
ATGGCTATTCTCATATTCCA+TGG	0.536637	1_4:-45951735	Msa0165410:three_prime_UTR
GATGGTGTTGTTGCTGCTGT+GGG	0.540954	1_4:+45952799	None:intergenic
GAGGTGGAAGCTGATGTTGA+TGG	0.546837	1_4:+45951776	None:intergenic
CTGCATCTAGAGAGGGAAAG+AGG	0.549386	1_4:+45952656	None:intergenic
GGTAGTCTTGATGCACTGAT+AGG	0.557304	1_4:-45952039	Msa0165410:CDS
GGCCAAAAGTGTTCCAGTCA+CGG	0.557625	1_4:+45952702	None:intergenic
CAAGCTTGTCTTAATGGACA+TGG	0.568355	1_4:+45952063	None:intergenic
ACCATCAGCAACGCCATAGT+TGG	0.569463	1_4:-45952782	Msa0165410:CDS
TTCATAGCGGCTGCTTGTGG+TGG	0.573016	1_4:+45952736	None:intergenic
AGAGGCAATTGCAATTGCAT+TGG	0.573224	1_4:+45951814	None:intergenic
ACCAACTATGGCGTTGCTGA+TGG	0.573256	1_4:+45952781	None:intergenic
TCTCACTCCCTCACTCACTC+TGG	0.573433	1_4:-45952986	Msa0165410:five_prime_UTR
TGTTAGACTTTACCTTCGTG+AGG	0.586964	1_4:-45951950	Msa0165410:CDS
CTAATTGATGTACATGGAGA+AGG	0.590912	1_4:-45951419	Msa0165410:three_prime_UTR
GAGCACCGCTGCATCTAGAG+AGG	0.594373	1_4:+45952648	None:intergenic
GGACATGGACATGGTGCTGG+AGG	0.596653	1_4:+45952078	None:intergenic
AGTTAACTAATTGATGTACA+TGG	0.599715	1_4:-45951425	Msa0165410:three_prime_UTR
GATCTTCAATCCAAAGCAAG+AGG	0.603866	1_4:-45951922	Msa0165410:CDS
TAGTTATGGTGCTGTTGGTG+AGG	0.606112	1_4:+45952822	None:intergenic
GAGGAGGACGGTGATTCTTG+AGG	0.610671	1_4:+45952675	None:intergenic
TTGAAGTAGCAGAAAAGTGG+TGG	0.618514	1_4:-45951460	Msa0165410:three_prime_UTR
TAGTTGAAGTAGCAGAAAAG+TGG	0.618989	1_4:-45951463	Msa0165410:three_prime_UTR
ACAGTGACCAGAGTGAGTGA+GGG	0.621654	1_4:+45952979	None:intergenic
CTTTCCCTCTCTAGATGCAG+CGG	0.626380	1_4:-45952653	Msa0165410:CDS
TGTCTTAATGGACATGGACA+TGG	0.626839	1_4:+45952069	None:intergenic
TGTTGTGGTTGTTGTTGTGG+TGG	0.627258	1_4:+45951868	None:intergenic
TGGTGATGATGAAGATGAAG+AGG	0.634389	1_4:+45951796	None:intergenic
AAGTAGCAGAAAAGTGGTGG+TGG	0.637663	1_4:-45951457	Msa0165410:three_prime_UTR
AGCACCGCTGCATCTAGAGA+GGG	0.651203	1_4:+45952649	None:intergenic
GACATGGACATGGTGCTGGA+GGG	0.653330	1_4:+45952079	None:intergenic
TAGAGAGGGAAAGAGGAGGA+CGG	0.658514	1_4:+45952663	None:intergenic
ATGGTATGGACCTCTTCAAG+TGG	0.664910	1_4:+45953257	None:intergenic
CTTGTGGTGGTAGAGCCAGA+AGG	0.676492	1_4:+45952749	None:intergenic
CATCTAGAGAGGGAAAGAGG+AGG	0.683732	1_4:+45952659	None:intergenic
GAAGATCACGAACCTCACGA+AGG	0.739048	1_4:+45951938	None:intergenic
TGTCCATTAAGACAAGCTTG+GGG	0.750306	1_4:-45952060	Msa0165410:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTTATAAACAAGTTT+TGG	-	chr1_4:45952149-45952168	Msa0165410:intron	10.0%
!!	AAAAAATATATCGAAAAAAT+TGG	+	chr1_4:45952355-45952374	None:intergenic	10.0%
!!!	ATTTTTTTATAAACAAGTTT+TGG	-	chr1_4:45952149-45952168	Msa0165410:intron	10.0%
!!	AAAAAATATATCGAAAAAAT+TGG	+	chr1_4:45952355-45952374	None:intergenic	10.0%
!!!	AAGATTTTTTATGTTAAATG+AGG	+	chr1_4:45951420-45951439	None:intergenic	15.0%
!!	TAATGACAACATTTAATTAA+TGG	-	chr1_4:45953203-45953222	Msa0165410:five_prime_UTR	15.0%
!!!	AAGATTTTTTATGTTAAATG+AGG	+	chr1_4:45951420-45951439	None:intergenic	15.0%
!!	TAATGACAACATTTAATTAA+TGG	-	chr1_4:45953203-45953222	Msa0165410:five_prime_UTR	15.0%
!!	GTTTGATGTACTAATAATTT+GGG	+	chr1_4:45951659-45951678	None:intergenic	20.0%
!!	AGTTTGATGTACTAATAATT+TGG	+	chr1_4:45951660-45951679	None:intergenic	20.0%
!!!	AAGAGAAAAAATTTGTTCTA+GGG	+	chr1_4:45951762-45951781	None:intergenic	20.0%
!!!	AAAGAGAAAAAATTTGTTCT+AGG	+	chr1_4:45951763-45951782	None:intergenic	20.0%
!!!	TTTTTCCCTAACTAATTATT+AGG	-	chr1_4:45952279-45952298	Msa0165410:intron	20.0%
!!!	TTTTCCCTAACTAATTATTA+GGG	-	chr1_4:45952280-45952299	Msa0165410:intron	20.0%
!!!	ATGTACTTGTTAGAAATTAA+AGG	+	chr1_4:45952394-45952413	None:intergenic	20.0%
!!	TACATATTCATTCAACAAAT+GGG	-	chr1_4:45952409-45952428	Msa0165410:intron	20.0%
!!!	TCATTATTTTCTCTTGAATA+TGG	+	chr1_4:45952483-45952502	None:intergenic	20.0%
!!	AATTGTTAATATTGTGATGT+AGG	-	chr1_4:45952539-45952558	Msa0165410:intron	20.0%
!!!	AATAAAGATAGTTTTTTCCA+TGG	+	chr1_4:45952991-45953010	None:intergenic	20.0%
!!!	TAAATTTTGTGAAAGATTTC+TGG	-	chr1_4:45953097-45953116	Msa0165410:five_prime_UTR	20.0%
!!	GTTTGATGTACTAATAATTT+GGG	+	chr1_4:45951659-45951678	None:intergenic	20.0%
!!	AGTTTGATGTACTAATAATT+TGG	+	chr1_4:45951660-45951679	None:intergenic	20.0%
!!!	AAGAGAAAAAATTTGTTCTA+GGG	+	chr1_4:45951762-45951781	None:intergenic	20.0%
!!!	AAAGAGAAAAAATTTGTTCT+AGG	+	chr1_4:45951763-45951782	None:intergenic	20.0%
!!!	TTTTTCCCTAACTAATTATT+AGG	-	chr1_4:45952279-45952298	Msa0165410:intron	20.0%
!!!	TTTTCCCTAACTAATTATTA+GGG	-	chr1_4:45952280-45952299	Msa0165410:intron	20.0%
!!!	ATGTACTTGTTAGAAATTAA+AGG	+	chr1_4:45952394-45952413	None:intergenic	20.0%
!!	TACATATTCATTCAACAAAT+GGG	-	chr1_4:45952409-45952428	Msa0165410:intron	20.0%
!!!	TCATTATTTTCTCTTGAATA+TGG	+	chr1_4:45952483-45952502	None:intergenic	20.0%
!!	AATTGTTAATATTGTGATGT+AGG	-	chr1_4:45952539-45952558	Msa0165410:intron	20.0%
!!!	AATAAAGATAGTTTTTTCCA+TGG	+	chr1_4:45952991-45953010	None:intergenic	20.0%
!!!	TAAATTTTGTGAAAGATTTC+TGG	-	chr1_4:45953097-45953116	Msa0165410:five_prime_UTR	20.0%
!!	TTCCTTTTCATTTTCTTTCA+AGG	-	chr1_4:45951554-45951573	Msa0165410:three_prime_UTR	25.0%
!	TACCTTGAAAGAAAATGAAA+AGG	+	chr1_4:45951559-45951578	None:intergenic	25.0%
!	TCTGAAAATTAAGCTAGAAA+AGG	-	chr1_4:45951799-45951818	Msa0165410:CDS	25.0%
!!	GGATTCAATTCAAGATTTTA+TGG	-	chr1_4:45951833-45951852	Msa0165410:CDS	25.0%
!!!	CTCATTTCATGTTTTTTTGT+TGG	+	chr1_4:45952110-45952129	None:intergenic	25.0%
!!!	GTTTTGGTGAATCAATATTT+TGG	-	chr1_4:45952165-45952184	Msa0165410:intron	25.0%
!	CATACCCTAATAATTAGTTA+GGG	+	chr1_4:45952287-45952306	None:intergenic	25.0%
!	TCATACCCTAATAATTAGTT+AGG	+	chr1_4:45952288-45952307	None:intergenic	25.0%
!	GTACATATTCATTCAACAAA+TGG	-	chr1_4:45952408-45952427	Msa0165410:intron	25.0%
!	CAAAAAAATGTTGCAAGATT+AGG	+	chr1_4:45952515-45952534	None:intergenic	25.0%
!!!	CTAATCTTGCAACATTTTTT+TGG	-	chr1_4:45952513-45952532	Msa0165410:intron	25.0%
!	TTAGTTATGAGAAGAAGAAA+AGG	-	chr1_4:45952809-45952828	Msa0165410:CDS	25.0%
!	AGTTAACTAATTGATGTACA+TGG	-	chr1_4:45953281-45953300	Msa0165410:five_prime_UTR	25.0%
!!	TTCCTTTTCATTTTCTTTCA+AGG	-	chr1_4:45951554-45951573	Msa0165410:three_prime_UTR	25.0%
!	TACCTTGAAAGAAAATGAAA+AGG	+	chr1_4:45951559-45951578	None:intergenic	25.0%
!	TCTGAAAATTAAGCTAGAAA+AGG	-	chr1_4:45951799-45951818	Msa0165410:CDS	25.0%
!!	GGATTCAATTCAAGATTTTA+TGG	-	chr1_4:45951833-45951852	Msa0165410:CDS	25.0%
!!!	CTCATTTCATGTTTTTTTGT+TGG	+	chr1_4:45952110-45952129	None:intergenic	25.0%
!!!	GTTTTGGTGAATCAATATTT+TGG	-	chr1_4:45952165-45952184	Msa0165410:intron	25.0%
!	CATACCCTAATAATTAGTTA+GGG	+	chr1_4:45952287-45952306	None:intergenic	25.0%
!	TCATACCCTAATAATTAGTT+AGG	+	chr1_4:45952288-45952307	None:intergenic	25.0%
!	GTACATATTCATTCAACAAA+TGG	-	chr1_4:45952408-45952427	Msa0165410:intron	25.0%
!	CAAAAAAATGTTGCAAGATT+AGG	+	chr1_4:45952515-45952534	None:intergenic	25.0%
!!!	CTAATCTTGCAACATTTTTT+TGG	-	chr1_4:45952513-45952532	Msa0165410:intron	25.0%
!	TTAGTTATGAGAAGAAGAAA+AGG	-	chr1_4:45952809-45952828	Msa0165410:CDS	25.0%
!	AGTTAACTAATTGATGTACA+TGG	-	chr1_4:45953281-45953300	Msa0165410:five_prime_UTR	25.0%
	TTGAAGAGATAGATGGTATA+TGG	+	chr1_4:45951471-45951490	None:intergenic	30.0%
	AGAGAAATTGAAGAGATAGA+TGG	+	chr1_4:45951478-45951497	None:intergenic	30.0%
	AAAGGAAACAAACTCTGATT+TGG	+	chr1_4:45951541-45951560	None:intergenic	30.0%
!	TTCTCTTTTCAAAACAACAC+TGG	-	chr1_4:45951775-45951794	Msa0165410:CDS	30.0%
	CTAGAAAAGGATTCAATCTA+TGG	-	chr1_4:45951812-45951831	Msa0165410:CDS	30.0%
!!!	GTTTTTTTGTTGGTATGTAC+CGG	+	chr1_4:45952100-45952119	None:intergenic	30.0%
!!	TTGGTGAATCAATATTTTGG+TGG	-	chr1_4:45952168-45952187	Msa0165410:intron	30.0%
	ACATACAAAAGATCGATCTA+GGG	-	chr1_4:45952432-45952451	Msa0165410:intron	30.0%
	AATATTGTGATGTAGGTACT+TGG	-	chr1_4:45952546-45952565	Msa0165410:intron	30.0%
	ATAACTAATACCTCTTGCTT+TGG	+	chr1_4:45952797-45952816	None:intergenic	30.0%
	TTAAATGAGGATATGTGATG+GGG	+	chr1_4:45951407-45951426	None:intergenic	30.0%
	GTTAAATGAGGATATGTGAT+GGG	+	chr1_4:45951408-45951427	None:intergenic	30.0%
	TGTTAAATGAGGATATGTGA+TGG	+	chr1_4:45951409-45951428	None:intergenic	30.0%
	TTGAAGAGATAGATGGTATA+TGG	+	chr1_4:45951471-45951490	None:intergenic	30.0%
	AGAGAAATTGAAGAGATAGA+TGG	+	chr1_4:45951478-45951497	None:intergenic	30.0%
	AAAGGAAACAAACTCTGATT+TGG	+	chr1_4:45951541-45951560	None:intergenic	30.0%
!	TTCTCTTTTCAAAACAACAC+TGG	-	chr1_4:45951775-45951794	Msa0165410:CDS	30.0%
	CTAGAAAAGGATTCAATCTA+TGG	-	chr1_4:45951812-45951831	Msa0165410:CDS	30.0%
!!!	GTTTTTTTGTTGGTATGTAC+CGG	+	chr1_4:45952100-45952119	None:intergenic	30.0%
!!	TTGGTGAATCAATATTTTGG+TGG	-	chr1_4:45952168-45952187	Msa0165410:intron	30.0%
	ACATACAAAAGATCGATCTA+GGG	-	chr1_4:45952432-45952451	Msa0165410:intron	30.0%
	AATATTGTGATGTAGGTACT+TGG	-	chr1_4:45952546-45952565	Msa0165410:intron	30.0%
	ATAACTAATACCTCTTGCTT+TGG	+	chr1_4:45952797-45952816	None:intergenic	30.0%
	GAGATAGATGGTATATGGTA+TGG	+	chr1_4:45951466-45951485	None:intergenic	35.0%
!!	GGTTGATTGATTTTACAGAC+TGG	+	chr1_4:45951520-45951539	None:intergenic	35.0%
	CTCATGTTCTTGAATTTCTC+CGG	-	chr1_4:45952078-45952097	Msa0165410:CDS	35.0%
	AAAGAACAAGAGATGTTTCC+AGG	+	chr1_4:45952231-45952250	None:intergenic	35.0%
	GACATACAAAAGATCGATCT+AGG	-	chr1_4:45952431-45952450	Msa0165410:intron	35.0%
!	GAACTTTTGTCTTGCCAAAT+TGG	+	chr1_4:45952573-45952592	None:intergenic	35.0%
	TGTCCATAGAATGGACAAAT+CGG	+	chr1_4:45952601-45952620	None:intergenic	35.0%
	ATGTCCATTAAGACAAGCTT+GGG	-	chr1_4:45952645-45952664	Msa0165410:CDS	35.0%
	AAGCCAGAAACAAATCCATT+TGG	-	chr1_4:45952724-45952743	Msa0165410:CDS	35.0%
	ATGGCTATTCTCATATTCCA+TGG	-	chr1_4:45952971-45952990	Msa0165410:five_prime_UTR	35.0%
	AAGTACTAGTAGTAGCTAGT+AGG	-	chr1_4:45953050-45953069	Msa0165410:five_prime_UTR	35.0%
	TAGTAGTAGCTAGTAGGTTT+AGG	-	chr1_4:45953056-45953075	Msa0165410:five_prime_UTR	35.0%
	TAGTTGAAGTAGCAGAAAAG+TGG	-	chr1_4:45953243-45953262	Msa0165410:five_prime_UTR	35.0%
	CTAATTGATGTACATGGAGA+AGG	-	chr1_4:45953287-45953306	Msa0165410:five_prime_UTR	35.0%
	GAGATAGATGGTATATGGTA+TGG	+	chr1_4:45951466-45951485	None:intergenic	35.0%
!!	GGTTGATTGATTTTACAGAC+TGG	+	chr1_4:45951520-45951539	None:intergenic	35.0%
	CTCATGTTCTTGAATTTCTC+CGG	-	chr1_4:45952078-45952097	Msa0165410:CDS	35.0%
	AAAGAACAAGAGATGTTTCC+AGG	+	chr1_4:45952231-45952250	None:intergenic	35.0%
	GACATACAAAAGATCGATCT+AGG	-	chr1_4:45952431-45952450	Msa0165410:intron	35.0%
!	GAACTTTTGTCTTGCCAAAT+TGG	+	chr1_4:45952573-45952592	None:intergenic	35.0%
	TGTCCATAGAATGGACAAAT+CGG	+	chr1_4:45952601-45952620	None:intergenic	35.0%
	ATGTCCATTAAGACAAGCTT+GGG	-	chr1_4:45952645-45952664	Msa0165410:CDS	35.0%
	AAGCCAGAAACAAATCCATT+TGG	-	chr1_4:45952724-45952743	Msa0165410:CDS	35.0%
	ATGGCTATTCTCATATTCCA+TGG	-	chr1_4:45952971-45952990	Msa0165410:five_prime_UTR	35.0%
	AAGTACTAGTAGTAGCTAGT+AGG	-	chr1_4:45953050-45953069	Msa0165410:five_prime_UTR	35.0%
	TAGTAGTAGCTAGTAGGTTT+AGG	-	chr1_4:45953056-45953075	Msa0165410:five_prime_UTR	35.0%
	TAGTTGAAGTAGCAGAAAAG+TGG	-	chr1_4:45953243-45953262	Msa0165410:five_prime_UTR	35.0%
	CTAATTGATGTACATGGAGA+AGG	-	chr1_4:45953287-45953306	Msa0165410:five_prime_UTR	35.0%
	AGAGATTGAATCCTGAAACC+TGG	-	chr1_4:45952210-45952229	Msa0165410:intron	40.0%
	AAGAGATGTTTCCAGGTTTC+AGG	+	chr1_4:45952224-45952243	None:intergenic	40.0%
	TGTAGGTACTTGGACCAATT+TGG	-	chr1_4:45952556-45952575	Msa0165410:intron	40.0%
!!	ACACCGATTTGTCCATTCTA+TGG	-	chr1_4:45952595-45952614	Msa0165410:intron	40.0%
!	TGTCTTAATGGACATGGACA+TGG	+	chr1_4:45952640-45952659	None:intergenic	40.0%
!	CAAGCTTGTCTTAATGGACA+TGG	+	chr1_4:45952646-45952665	None:intergenic	40.0%
	CATGTCCATTAAGACAAGCT+TGG	-	chr1_4:45952644-45952663	Msa0165410:CDS	40.0%
	TGTCCATTAAGACAAGCTTG+GGG	-	chr1_4:45952646-45952665	Msa0165410:CDS	40.0%
!	ATGCACTGATAGGTCGTTTA+AGG	-	chr1_4:45952677-45952696	Msa0165410:CDS	40.0%
!	TGCACTGATAGGTCGTTTAA+GGG	-	chr1_4:45952678-45952697	Msa0165410:CDS	40.0%
!!	CAGCTTTTGAGGAAAATGGA+GGG	-	chr1_4:45952701-45952720	Msa0165410:CDS	40.0%
!	GCACCAAATGGATTTGTTTC+TGG	+	chr1_4:45952730-45952749	None:intergenic	40.0%
	TGTTAGACTTTACCTTCGTG+AGG	-	chr1_4:45952756-45952775	Msa0165410:CDS	40.0%
	GATCTTCAATCCAAAGCAAG+AGG	-	chr1_4:45952784-45952803	Msa0165410:CDS	40.0%
	AGAGGCAATTGCAATTGCAT+TGG	+	chr1_4:45952895-45952914	None:intergenic	40.0%
!	TGGTGATGATGAAGATGAAG+AGG	+	chr1_4:45952913-45952932	None:intergenic	40.0%
!!	TTTTATTGAGTTGCACCTGG+AGG	+	chr1_4:45952952-45952971	None:intergenic	40.0%
!!	CCATTTTATTGAGTTGCACC+TGG	+	chr1_4:45952955-45952974	None:intergenic	40.0%
	CCAGGTGCAACTCAATAAAA+TGG	-	chr1_4:45952952-45952971	Msa0165410:five_prime_UTR	40.0%
	TTGAAGTAGCAGAAAAGTGG+TGG	-	chr1_4:45953246-45953265	Msa0165410:five_prime_UTR	40.0%
	AGAGATTGAATCCTGAAACC+TGG	-	chr1_4:45952210-45952229	Msa0165410:intron	40.0%
	AAGAGATGTTTCCAGGTTTC+AGG	+	chr1_4:45952224-45952243	None:intergenic	40.0%
	TGTAGGTACTTGGACCAATT+TGG	-	chr1_4:45952556-45952575	Msa0165410:intron	40.0%
!!	ACACCGATTTGTCCATTCTA+TGG	-	chr1_4:45952595-45952614	Msa0165410:intron	40.0%
!	TGTCTTAATGGACATGGACA+TGG	+	chr1_4:45952640-45952659	None:intergenic	40.0%
!	CAAGCTTGTCTTAATGGACA+TGG	+	chr1_4:45952646-45952665	None:intergenic	40.0%
	CATGTCCATTAAGACAAGCT+TGG	-	chr1_4:45952644-45952663	Msa0165410:CDS	40.0%
	TGTCCATTAAGACAAGCTTG+GGG	-	chr1_4:45952646-45952665	Msa0165410:CDS	40.0%
!	ATGCACTGATAGGTCGTTTA+AGG	-	chr1_4:45952677-45952696	Msa0165410:CDS	40.0%
!	TGCACTGATAGGTCGTTTAA+GGG	-	chr1_4:45952678-45952697	Msa0165410:CDS	40.0%
!!	CAGCTTTTGAGGAAAATGGA+GGG	-	chr1_4:45952701-45952720	Msa0165410:CDS	40.0%
!	GCACCAAATGGATTTGTTTC+TGG	+	chr1_4:45952730-45952749	None:intergenic	40.0%
	TGTTAGACTTTACCTTCGTG+AGG	-	chr1_4:45952756-45952775	Msa0165410:CDS	40.0%
	GATCTTCAATCCAAAGCAAG+AGG	-	chr1_4:45952784-45952803	Msa0165410:CDS	40.0%
	AGAGGCAATTGCAATTGCAT+TGG	+	chr1_4:45952895-45952914	None:intergenic	40.0%
!	TGGTGATGATGAAGATGAAG+AGG	+	chr1_4:45952913-45952932	None:intergenic	40.0%
!!	TTTTATTGAGTTGCACCTGG+AGG	+	chr1_4:45952952-45952971	None:intergenic	40.0%
!!	CCATTTTATTGAGTTGCACC+TGG	+	chr1_4:45952955-45952974	None:intergenic	40.0%
	CCAGGTGCAACTCAATAAAA+TGG	-	chr1_4:45952952-45952971	Msa0165410:five_prime_UTR	40.0%
	TTGAAGTAGCAGAAAAGTGG+TGG	-	chr1_4:45953246-45953265	Msa0165410:five_prime_UTR	40.0%
	TCTTGCTTCACCACTTGAAG+AGG	-	chr1_4:45951439-45951458	Msa0165410:three_prime_UTR	45.0%
	ATGGTATGGACCTCTTCAAG+TGG	+	chr1_4:45951452-45951471	None:intergenic	45.0%
	GAGGGAGTGAGAATATAGGA+TGG	+	chr1_4:45951712-45951731	None:intergenic	45.0%
	GAGTGAGGGAGTGAGAATAT+AGG	+	chr1_4:45951716-45951735	None:intergenic	45.0%
	TCACTCTGGTCACTGTCTTT+AGG	-	chr1_4:45951734-45951753	Msa0165410:three_prime_UTR	45.0%
!!	TAGTTATGGTGCTGTTGGTG+AGG	+	chr1_4:45951887-45951906	None:intergenic	45.0%
	AGGTGAAGAGCTACCAACTA+TGG	+	chr1_4:45951940-45951959	None:intergenic	45.0%
!!!	GGCGTTTCTGGTTTTCATAG+CGG	+	chr1_4:45951986-45952005	None:intergenic	45.0%
	GGGTTTGGATGTCCATAGAA+TGG	+	chr1_4:45952610-45952629	None:intergenic	45.0%
	CTACCCCAAGCTTGTCTTAA+TGG	+	chr1_4:45952652-45952671	None:intergenic	45.0%
!	GGTAGTCTTGATGCACTGAT+AGG	-	chr1_4:45952667-45952686	Msa0165410:CDS	45.0%
!	TCGTTTAAGGGCAGCTTTTG+AGG	-	chr1_4:45952690-45952709	Msa0165410:CDS	45.0%
!!	AGGGCAGCTTTTGAGGAAAA+TGG	-	chr1_4:45952697-45952716	Msa0165410:CDS	45.0%
!!	GCAGCTTTTGAGGAAAATGG+AGG	-	chr1_4:45952700-45952719	Msa0165410:CDS	45.0%
!	CTAACAGCTCTAGCACCAAA+TGG	+	chr1_4:45952742-45952761	None:intergenic	45.0%
!	TGTTGTGGTTGTTGTTGTGG+TGG	+	chr1_4:45952841-45952860	None:intergenic	45.0%
!	AGCTGTTGTGGTTGTTGTTG+TGG	+	chr1_4:45952844-45952863	None:intergenic	45.0%
	AAGTAGCAGAAAAGTGGTGG+TGG	-	chr1_4:45953249-45953268	Msa0165410:five_prime_UTR	45.0%
	TCTTGCTTCACCACTTGAAG+AGG	-	chr1_4:45951439-45951458	Msa0165410:three_prime_UTR	45.0%
	ATGGTATGGACCTCTTCAAG+TGG	+	chr1_4:45951452-45951471	None:intergenic	45.0%
	GAGGGAGTGAGAATATAGGA+TGG	+	chr1_4:45951712-45951731	None:intergenic	45.0%
	GAGTGAGGGAGTGAGAATAT+AGG	+	chr1_4:45951716-45951735	None:intergenic	45.0%
	TCACTCTGGTCACTGTCTTT+AGG	-	chr1_4:45951734-45951753	Msa0165410:three_prime_UTR	45.0%
!!	TAGTTATGGTGCTGTTGGTG+AGG	+	chr1_4:45951887-45951906	None:intergenic	45.0%
	AGGTGAAGAGCTACCAACTA+TGG	+	chr1_4:45951940-45951959	None:intergenic	45.0%
!!!	GGCGTTTCTGGTTTTCATAG+CGG	+	chr1_4:45951986-45952005	None:intergenic	45.0%
	GGGTTTGGATGTCCATAGAA+TGG	+	chr1_4:45952610-45952629	None:intergenic	45.0%
	CTACCCCAAGCTTGTCTTAA+TGG	+	chr1_4:45952652-45952671	None:intergenic	45.0%
!	GGTAGTCTTGATGCACTGAT+AGG	-	chr1_4:45952667-45952686	Msa0165410:CDS	45.0%
!	TCGTTTAAGGGCAGCTTTTG+AGG	-	chr1_4:45952690-45952709	Msa0165410:CDS	45.0%
!!	AGGGCAGCTTTTGAGGAAAA+TGG	-	chr1_4:45952697-45952716	Msa0165410:CDS	45.0%
!!	GCAGCTTTTGAGGAAAATGG+AGG	-	chr1_4:45952700-45952719	Msa0165410:CDS	45.0%
!	CTAACAGCTCTAGCACCAAA+TGG	+	chr1_4:45952742-45952761	None:intergenic	45.0%
!	TGTTGTGGTTGTTGTTGTGG+TGG	+	chr1_4:45952841-45952860	None:intergenic	45.0%
!	AGCTGTTGTGGTTGTTGTTG+TGG	+	chr1_4:45952844-45952863	None:intergenic	45.0%
	AAGTAGCAGAAAAGTGGTGG+TGG	-	chr1_4:45953249-45953268	Msa0165410:five_prime_UTR	45.0%
	ACAGTGACCAGAGTGAGTGA+GGG	+	chr1_4:45951730-45951749	None:intergenic	50.0%
!!	GTGGGTAGTTATGGTGCTGT+TGG	+	chr1_4:45951892-45951911	None:intergenic	50.0%
	GTTGCTGCTGTGGGTAGTTA+TGG	+	chr1_4:45951901-45951920	None:intergenic	50.0%
!!	GATGGTGTTGTTGCTGCTGT+GGG	+	chr1_4:45951910-45951929	None:intergenic	50.0%
!!	TGATGGTGTTGTTGCTGCTG+TGG	+	chr1_4:45951911-45951930	None:intergenic	50.0%
	ACCATCAGCAACGCCATAGT+TGG	-	chr1_4:45951924-45951943	Msa0165410:CDS	50.0%
	ACCAACTATGGCGTTGCTGA+TGG	+	chr1_4:45951928-45951947	None:intergenic	50.0%
!!	GTTGGTAGCTCTTCACCTTC+TGG	-	chr1_4:45951942-45951961	Msa0165410:CDS	50.0%
!	GTTTTCATAGCGGCTGCTTG+TGG	+	chr1_4:45951976-45951995	None:intergenic	50.0%
	AAAACCAGAAACGCCGTGAC+TGG	-	chr1_4:45951991-45952010	Msa0165410:CDS	50.0%
!!	GGCCAAAAGTGTTCCAGTCA+CGG	+	chr1_4:45952007-45952026	None:intergenic	50.0%
	GACGGTGATTCTTGAGGTAC+TGG	+	chr1_4:45952028-45952047	None:intergenic	50.0%
	TAGAGAGGGAAAGAGGAGGA+CGG	+	chr1_4:45952046-45952065	None:intergenic	50.0%
	CATCTAGAGAGGGAAAGAGG+AGG	+	chr1_4:45952050-45952069	None:intergenic	50.0%
	CTGCATCTAGAGAGGGAAAG+AGG	+	chr1_4:45952053-45952072	None:intergenic	50.0%
	CTTTCCCTCTCTAGATGCAG+CGG	-	chr1_4:45952053-45952072	Msa0165410:CDS	50.0%
	AATGGACATGGACATGGTGC+TGG	+	chr1_4:45952634-45952653	None:intergenic	50.0%
	GAAGATCACGAACCTCACGA+AGG	+	chr1_4:45952771-45952790	None:intergenic	50.0%
	TGCTGAAGCTGAAGCTGTTG+TGG	+	chr1_4:45952856-45952875	None:intergenic	50.0%
	GAGGTGGAAGCTGATGTTGA+TGG	+	chr1_4:45952933-45952952	None:intergenic	50.0%
!	TATTGAGTTGCACCTGGAGG+TGG	+	chr1_4:45952949-45952968	None:intergenic	50.0%
	ACAGTGACCAGAGTGAGTGA+GGG	+	chr1_4:45951730-45951749	None:intergenic	50.0%
!!	GTGGGTAGTTATGGTGCTGT+TGG	+	chr1_4:45951892-45951911	None:intergenic	50.0%
	GTTGCTGCTGTGGGTAGTTA+TGG	+	chr1_4:45951901-45951920	None:intergenic	50.0%
!!	GATGGTGTTGTTGCTGCTGT+GGG	+	chr1_4:45951910-45951929	None:intergenic	50.0%
!!	TGATGGTGTTGTTGCTGCTG+TGG	+	chr1_4:45951911-45951930	None:intergenic	50.0%
	ACCATCAGCAACGCCATAGT+TGG	-	chr1_4:45951924-45951943	Msa0165410:CDS	50.0%
	ACCAACTATGGCGTTGCTGA+TGG	+	chr1_4:45951928-45951947	None:intergenic	50.0%
!!	GTTGGTAGCTCTTCACCTTC+TGG	-	chr1_4:45951942-45951961	Msa0165410:CDS	50.0%
!	GTTTTCATAGCGGCTGCTTG+TGG	+	chr1_4:45951976-45951995	None:intergenic	50.0%
	AAAACCAGAAACGCCGTGAC+TGG	-	chr1_4:45951991-45952010	Msa0165410:CDS	50.0%
!!	GGCCAAAAGTGTTCCAGTCA+CGG	+	chr1_4:45952007-45952026	None:intergenic	50.0%
	GACGGTGATTCTTGAGGTAC+TGG	+	chr1_4:45952028-45952047	None:intergenic	50.0%
	TAGAGAGGGAAAGAGGAGGA+CGG	+	chr1_4:45952046-45952065	None:intergenic	50.0%
	CATCTAGAGAGGGAAAGAGG+AGG	+	chr1_4:45952050-45952069	None:intergenic	50.0%
	CTGCATCTAGAGAGGGAAAG+AGG	+	chr1_4:45952053-45952072	None:intergenic	50.0%
	CTTTCCCTCTCTAGATGCAG+CGG	-	chr1_4:45952053-45952072	Msa0165410:CDS	50.0%
	AATGGACATGGACATGGTGC+TGG	+	chr1_4:45952634-45952653	None:intergenic	50.0%
	GAAGATCACGAACCTCACGA+AGG	+	chr1_4:45952771-45952790	None:intergenic	50.0%
	TGCTGAAGCTGAAGCTGTTG+TGG	+	chr1_4:45952856-45952875	None:intergenic	50.0%
	GAGGTGGAAGCTGATGTTGA+TGG	+	chr1_4:45952933-45952952	None:intergenic	50.0%
!	TATTGAGTTGCACCTGGAGG+TGG	+	chr1_4:45952949-45952968	None:intergenic	50.0%
	TCTCACTCCCTCACTCACTC+TGG	-	chr1_4:45951720-45951739	Msa0165410:three_prime_UTR	55.0%
	GACAGTGACCAGAGTGAGTG+AGG	+	chr1_4:45951731-45951750	None:intergenic	55.0%
	CTTGTGGTGGTAGAGCCAGA+AGG	+	chr1_4:45951960-45951979	None:intergenic	55.0%
	TTCATAGCGGCTGCTTGTGG+TGG	+	chr1_4:45951973-45951992	None:intergenic	55.0%
	TGTTCCAGTCACGGCGTTTC+TGG	+	chr1_4:45951998-45952017	None:intergenic	55.0%
!	CGCCGTGACTGGAACACTTT+TGG	-	chr1_4:45952002-45952021	Msa0165410:CDS	55.0%
	GAGGAGGACGGTGATTCTTG+AGG	+	chr1_4:45952034-45952053	None:intergenic	55.0%
	AGCACCGCTGCATCTAGAGA+GGG	+	chr1_4:45952060-45952079	None:intergenic	55.0%
!	GACATGGACATGGTGCTGGA+GGG	+	chr1_4:45952630-45952649	None:intergenic	55.0%
	CAACATCAGCTTCCACCTCC+AGG	-	chr1_4:45952934-45952953	Msa0165410:five_prime_UTR	55.0%
	TCTCACTCCCTCACTCACTC+TGG	-	chr1_4:45951720-45951739	Msa0165410:three_prime_UTR	55.0%
	GACAGTGACCAGAGTGAGTG+AGG	+	chr1_4:45951731-45951750	None:intergenic	55.0%
	CTTGTGGTGGTAGAGCCAGA+AGG	+	chr1_4:45951960-45951979	None:intergenic	55.0%
	TTCATAGCGGCTGCTTGTGG+TGG	+	chr1_4:45951973-45951992	None:intergenic	55.0%
	TGTTCCAGTCACGGCGTTTC+TGG	+	chr1_4:45951998-45952017	None:intergenic	55.0%
!	CGCCGTGACTGGAACACTTT+TGG	-	chr1_4:45952002-45952021	Msa0165410:CDS	55.0%
	GAGGAGGACGGTGATTCTTG+AGG	+	chr1_4:45952034-45952053	None:intergenic	55.0%
	AGCACCGCTGCATCTAGAGA+GGG	+	chr1_4:45952060-45952079	None:intergenic	55.0%
!	GACATGGACATGGTGCTGGA+GGG	+	chr1_4:45952630-45952649	None:intergenic	55.0%
	CAACATCAGCTTCCACCTCC+AGG	-	chr1_4:45952934-45952953	Msa0165410:five_prime_UTR	55.0%
!	GAGCACCGCTGCATCTAGAG+AGG	+	chr1_4:45952061-45952080	None:intergenic	60.0%
!	GGACATGGTGCTGGAGGGTT+TGG	+	chr1_4:45952625-45952644	None:intergenic	60.0%
!	GGACATGGACATGGTGCTGG+AGG	+	chr1_4:45952631-45952650	None:intergenic	60.0%
!	GAGCACCGCTGCATCTAGAG+AGG	+	chr1_4:45952061-45952080	None:intergenic	60.0%
!	GGACATGGTGCTGGAGGGTT+TGG	+	chr1_4:45952625-45952644	None:intergenic	60.0%
!	GGACATGGACATGGTGCTGG+AGG	+	chr1_4:45952631-45952650	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	45951407	45953321	45951407	ID=Msa0165410;Name=Msa0165410
chr1_4	mRNA	45951407	45953321	45951407	ID=Msa0165410-mRNA-1;Parent=Msa0165410;Name=Msa0165410-mRNA-1;_AED=0.03;_eAED=0.03;_QI=424\|1\|1\|1\|1\|1\|2\|352\|225
chr1_4	exon	45951407	45952167	45951407	ID=Msa0165410-mRNA-1:exon:13186;Parent=Msa0165410-mRNA-1
chr1_4	exon	45952629	45953321	45952629	ID=Msa0165410-mRNA-1:exon:13185;Parent=Msa0165410-mRNA-1
chr1_4	five_prime_UTR	45952898	45953321	45952898	ID=Msa0165410-mRNA-1:five_prime_utr;Parent=Msa0165410-mRNA-1
chr1_4	CDS	45952629	45952897	45952629	ID=Msa0165410-mRNA-1:cds;Parent=Msa0165410-mRNA-1
chr1_4	CDS	45951759	45952167	45951759	ID=Msa0165410-mRNA-1:cds;Parent=Msa0165410-mRNA-1
chr1_4	three_prime_UTR	45951407	45951758	45951407	ID=Msa0165410-mRNA-1:three_prime_utr;Parent=Msa0165410-mRNA-1

Gene Sequence

>Msa0165410

ATGGATTCAATTCAAGATTTTATGGATTCATGTAACTCTGACAACAGTTGCAGCCTCACCAACAGCACCATAACTACCCACAGCAGCAACAACACCATCAGCAACGCCATAGTTGGTAGCTCTTCACCTTCTGGCTCTACCACCACAAGCAGCCGCTATGAAAACCAGAAACGCCGTGACTGGAACACTTTTGGCCAGTACCTCAAGAATCACCGTCCTCCTCTTTCCCTCTCTAGATGCAGCGGTGCTCATGTTCTTGAATTTCTCCGGTACTTGGACCAATTTGGCAAGACAAAAGTTCACACACCGATTTGTCCATTCTATGGACATCCAAACCCTCCAGCACCATGTCCATGTCCATTAAGACAAGCTTGGGGTAGTCTTGATGCACTGATAGGTCGTTTAAGGGCAGCTTTTGAGGAAAATGGAGGGAAGCCAGAAACAAATCCATTTGGTGCTAGAGCTGTTAGACTTTACCTTCGTGAGGTTCGTGATCTTCAATCCAAAGCAAGAGGTATTAGTTATGAGAAGAAGAAAAGGAAGCGTCCACCACAACAACAACCACAACAGCTTCAGCTTCAGCAGCAACAACAGCAACAACCAATGCAATTGCAATTGCCTCTTCATCTTCATCATCACCATCAACATCAGCTTCCACCTCCAGGTGCAACTCAATAA

Protein sequence

>Msa0165410

MDSIQDFMDSCNSDNSCSLTNSTITTHSSNNTISNAIVGSSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQPQQLQLQQQQQQQPMQLQLPLHLHHHHQHQLPPPGATQ*