Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181540 | sp|Q8W586|QQT2_ARATH | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181540 | G7IEN9 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076120 | Msa0181540 | 0.975342 | 8.880230e-140 | -8.615850e-47 |
| Msa0133410 | Msa0181540 | 0.978758 | 1.683834e-146 | -8.615850e-47 |
| Msa0181540 | Msa0184820 | 0.977235 | 2.232630e-143 | -8.615850e-47 |
| Msa0181540 | Msa0184880 | 0.983271 | 2.741735e-157 | -8.615850e-47 |
| Msa0181540 | Msa0791150 | 0.986029 | 1.924172e-165 | -8.615850e-47 |
| Msa0181540 | Msa1208380 | 0.803880 | 2.822491e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181540 | MtrunA17_Chr1g0202821 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 803 |
| Msa0181540 | MtrunA17_Chr3g0119231 | 29.255 | 188 | 128 | 3 | 61 | 245 | 6 | 191 | 4.38e-19 | 86.3 |
| Msa0181540 | MtrunA17_Chr8g0364001 | 30.688 | 189 | 122 | 3 | 61 | 244 | 6 | 190 | 9.52e-19 | 85.9 |
| Msa0181540 | MtrunA17_Chr5g0442031 | 39.506 | 81 | 49 | 0 | 61 | 141 | 6 | 86 | 1.44e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181540 | AT4G21800.2 | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Msa0181540 | AT4G21800.1 | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Msa0181540 | AT4G12790.4 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT4G12790.2 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT4G12790.6 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT4G12790.5 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT4G12790.1 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT4G12790.3 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0181540 | AT5G22370.2 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
| Msa0181540 | AT5G22370.3 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
| Msa0181540 | AT5G22370.1 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
Find 112 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTGAAGGTTCCTCTTC+TGG | 0.208586 | 1_4:+69783592 | Msa0181540:CDS |
| CAAAACAGATACTAGATATA+TGG | 0.237911 | 1_4:-69786458 | None:intergenic |
| TGTTGCGGAGGGTGTTGATT+AGG | 0.252127 | 1_4:-69783230 | None:intergenic |
| GCTGGAGTTTCTGCAGTTAC+TGG | 0.283127 | 1_4:+69785716 | Msa0181540:CDS |
| GATGATGATGATGTTGATTT+CGG | 0.300467 | 1_4:+69786105 | Msa0181540:CDS |
| GTTGCGGAGGGTGTTGATTA+GGG | 0.319457 | 1_4:-69783229 | None:intergenic |
| CCTGTTATCATCATTGTTGT+TGG | 0.328714 | 1_4:+69783637 | Msa0181540:CDS |
| GATAGAATGTATGAAATAAC+AGG | 0.330341 | 1_4:-69786312 | None:intergenic |
| ATGATGATGATGTTGATTTC+GGG | 0.336647 | 1_4:+69786106 | Msa0181540:CDS |
| CCAACAACAATGATGATAAC+AGG | 0.357092 | 1_4:-69783637 | None:intergenic |
| GTTTATCCATGTTCTCCTTC+CGG | 0.357858 | 1_4:-69785984 | None:intergenic |
| TATAGGACCTTGACTTCATT+TGG | 0.361838 | 1_4:+69786241 | Msa0181540:three_prime_UTR |
| ATATTCACATGGTCTGCTTC+TGG | 0.363085 | 1_4:+69784545 | Msa0181540:CDS |
| GAGTGAGTCTATGAAGAAAT+TGG | 0.370198 | 1_4:+69783570 | Msa0181540:CDS |
| GAAGTCAAAATTCCACCATT+GGG | 0.397466 | 1_4:-69784000 | None:intergenic |
| TACAGTAATTTAAGATCAGC+TGG | 0.416370 | 1_4:+69785698 | Msa0181540:CDS |
| ATCATTGTTGTTGGAATGGC+AGG | 0.426570 | 1_4:+69783646 | Msa0181540:CDS |
| GTTTCTGCAGTTACTGGTGC+TGG | 0.428710 | 1_4:+69785722 | Msa0181540:CDS |
| TTCCATGTATTCCTCTGCAC+TGG | 0.431616 | 1_4:-69785774 | None:intergenic |
| GAAATAACAGGGCAATAAAT+CGG | 0.435791 | 1_4:-69786300 | None:intergenic |
| GGATGAAGAGGATGAGGAAA+TGG | 0.438782 | 1_4:+69786083 | Msa0181540:CDS |
| ATACTCATCTGTCAAACATC+AGG | 0.441997 | 1_4:+69783866 | Msa0181540:CDS |
| TTTAACTCAGAGCCTTTCTC+TGG | 0.457020 | 1_4:+69785661 | Msa0181540:CDS |
| AAACTTAACCTCATCGAACT+TGG | 0.460043 | 1_4:-69784040 | None:intergenic |
| CTCATTTGTGTTAAGGGAGT+GGG | 0.461516 | 1_4:+69783812 | Msa0181540:intron |
| ATGAAGAAATTGGACATTGA+AGG | 0.465533 | 1_4:+69783580 | Msa0181540:CDS |
| AAAACAGATACTAGATATAT+GGG | 0.466514 | 1_4:-69786457 | None:intergenic |
| GGACGAGGATGAAGAGGATG+AGG | 0.467374 | 1_4:+69786077 | Msa0181540:CDS |
| CACACACACGCGAGCTCTCT+CGG | 0.468404 | 1_4:+69783136 | Msa0181540:five_prime_UTR |
| ACAACATGAGTTTGCCTTGG+AGG | 0.468476 | 1_4:+69784742 | Msa0181540:CDS |
| AAATTCCACCATTGGGGCCA+AGG | 0.471975 | 1_4:-69783993 | None:intergenic |
| TAGGGCTTACGGTGGTGATA+AGG | 0.472410 | 1_4:-69783211 | None:intergenic |
| AGGAGGGAGATGGAGAAATC+TGG | 0.473893 | 1_4:+69786009 | Msa0181540:CDS |
| GATCTGAACTTGCAGCTGCT+TGG | 0.481512 | 1_4:-69785622 | None:intergenic |
| GTCACCGGCTTCCATTTCCA+TGG | 0.485145 | 1_4:-69783298 | None:intergenic |
| TCACCGGCTTCCATTTCCAT+GGG | 0.489818 | 1_4:-69783297 | None:intergenic |
| ATATCAATGTTAGAAGCATA+TGG | 0.489870 | 1_4:-69783928 | None:intergenic |
| CAATTCAACCTTGGCCCCAA+TGG | 0.493147 | 1_4:+69783985 | Msa0181540:CDS |
| AGAAGTCAAAATTCCACCAT+TGG | 0.493187 | 1_4:-69784001 | None:intergenic |
| TCAGAGCCTTTCTCTGGCAC+TGG | 0.495072 | 1_4:+69785667 | Msa0181540:CDS |
| CTATCAGCATTATTCTCTCT+AGG | 0.500275 | 1_4:+69786330 | Msa0181540:three_prime_UTR |
| AGCACAACATGAGTTTGCCT+TGG | 0.507905 | 1_4:+69784739 | Msa0181540:CDS |
| AAGCATGTTGCTCATAAAAG+TGG | 0.519169 | 1_4:-69784651 | None:intergenic |
| AGGAGAACATGGATAAACTT+AGG | 0.522057 | 1_4:+69785989 | Msa0181540:CDS |
| TATGGAAGTGTCATGACAGC+CGG | 0.522098 | 1_4:-69783910 | None:intergenic |
| TCAACTTGACTATGTTCTTG+TGG | 0.522799 | 1_4:+69784502 | Msa0181540:CDS |
| ATTCATCCAGTGCCAGAGAA+AGG | 0.526358 | 1_4:-69785673 | None:intergenic |
| CGTTATCTGCGTCCATGTTG+CGG | 0.534923 | 1_4:-69783245 | None:intergenic |
| TTCAACCTTGGCCCCAATGG+TGG | 0.539374 | 1_4:+69783988 | Msa0181540:CDS |
| AGCCAGTGCAGAGGAATACA+TGG | 0.540021 | 1_4:+69785772 | Msa0181540:CDS |
| TATGTTCTTGTGGATACTCC+TGG | 0.544128 | 1_4:+69784512 | Msa0181540:CDS |
| GAAGTTAGGTGAACCAGAAG+AGG | 0.546699 | 1_4:-69783605 | None:intergenic |
| ATCGGAACTAGCGCTTGTAT+AGG | 0.552743 | 1_4:+69786224 | Msa0181540:three_prime_UTR |
| TATCATCATTGTTGTTGGAA+TGG | 0.555919 | 1_4:+69783642 | Msa0181540:CDS |
| AGAGGAGGACGAGGATGAAG+AGG | 0.556313 | 1_4:+69786071 | Msa0181540:CDS |
| TATGAACGTTTGGATTGCAT+CGG | 0.557691 | 1_4:+69786206 | Msa0181540:three_prime_UTR |
| GGATAAACTTAGGAGGGAGA+TGG | 0.557760 | 1_4:+69785999 | Msa0181540:CDS |
| GTCGTTCTCTTCTACACCAC+CGG | 0.560461 | 1_4:+69783174 | Msa0181540:five_prime_UTR |
| AGAAAGTACTTGAGAGTCAC+CGG | 0.565078 | 1_4:-69783313 | None:intergenic |
| ATCTGCGTCCATGTTGCGGA+GGG | 0.565997 | 1_4:-69783241 | None:intergenic |
| GACTACACTCATGCATAGGT+TGG | 0.567808 | 1_4:+69783837 | Msa0181540:CDS |
| GTTACTGGTGCTGGAATCGA+AGG | 0.568425 | 1_4:+69785731 | Msa0181540:CDS |
| GAAACTGTAGTGTTGAGCAC+TGG | 0.570041 | 1_4:+69786036 | Msa0181540:CDS |
| AGCTGTTGGAAGAAAATCGC+CGG | 0.572545 | 1_4:+69785965 | Msa0181540:CDS |
| AAATCGCCGGAAGGAGAACA+TGG | 0.572726 | 1_4:+69785978 | Msa0181540:CDS |
| TACTCATCTGTCAAACATCA+GGG | 0.573701 | 1_4:+69783867 | Msa0181540:CDS |
| ATGGAAGTGTCATGACAGCC+GGG | 0.578869 | 1_4:-69783909 | None:intergenic |
| GGCAACTACAGTGGGAAATG+TGG | 0.579709 | 1_4:-69784594 | None:intergenic |
| ATTTCTTCATAGACTCACTC+AGG | 0.587164 | 1_4:-69783567 | None:intergenic |
| GTGAATATCTCAATCTGACC+AGG | 0.587935 | 1_4:-69784530 | None:intergenic |
| AGAACATGGATAAACTTAGG+AGG | 0.588077 | 1_4:+69785992 | Msa0181540:CDS |
| GTTCATAAAATCACATCAGA+AGG | 0.589818 | 1_4:-69786190 | None:intergenic |
| TAAGGCGGCGCGAACAACTC+CGG | 0.589916 | 1_4:-69783193 | None:intergenic |
| GCATGTACCAAATGAAGTCA+AGG | 0.590004 | 1_4:-69786248 | None:intergenic |
| AATCAACACCCTCCGCAACA+TGG | 0.591565 | 1_4:+69783233 | Msa0181540:exon |
| AGATGAGGACGAAGATGAAG+AGG | 0.599265 | 1_4:+69786155 | Msa0181540:CDS |
| GTCATGAAGCAATTCAACCT+TGG | 0.600059 | 1_4:+69783976 | Msa0181540:CDS |
| AGGGAGATGGAGAAATCTGG+AGG | 0.604309 | 1_4:+69786012 | Msa0181540:CDS |
| AGGGTGTTGATTAGGGCTTA+CGG | 0.604717 | 1_4:-69783222 | None:intergenic |
| ACTACATAGGCAACTACAGT+GGG | 0.605400 | 1_4:-69784602 | None:intergenic |
| ACGAGGTGTATCAACTACAT+AGG | 0.606135 | 1_4:-69784615 | None:intergenic |
| ACGTGAAGAGAAACAGCTGT+TGG | 0.606507 | 1_4:+69785951 | Msa0181540:CDS |
| GAACATGGATAAACTTAGGA+GGG | 0.606999 | 1_4:+69785993 | Msa0181540:CDS |
| TTATGTGATGAATCTCGACC+CGG | 0.607451 | 1_4:+69783891 | Msa0181540:CDS |
| GAGGTAACCTTGTCTTATAG+AGG | 0.608238 | 1_4:-69784688 | None:intergenic |
| CAAAATCAACAATACCTCCA+AGG | 0.609268 | 1_4:-69784756 | None:intergenic |
| GGCTTACGGTGGTGATAAGG+CGG | 0.619827 | 1_4:-69783208 | None:intergenic |
| TTGTTGAATGCTAAGATGAG+AGG | 0.620285 | 1_4:-69784707 | None:intergenic |
| AACTACAGTGGGAAATGTGG+AGG | 0.621918 | 1_4:-69784591 | None:intergenic |
| ATGTTGCTCATAAAAGTGGT+AGG | 0.622477 | 1_4:-69784647 | None:intergenic |
| AGCTGTTGAAGCCAGTGCAG+AGG | 0.624332 | 1_4:+69785763 | Msa0181540:CDS |
| CGGGACATACACTGAAGATG+AGG | 0.626150 | 1_4:+69786125 | Msa0181540:CDS |
| CACCGGCTTCCATTTCCATG+GGG | 0.630823 | 1_4:-69783296 | None:intergenic |
| TATCTGCGTCCATGTTGCGG+AGG | 0.634849 | 1_4:-69783242 | None:intergenic |
| GGAAGACTACACTCATGCAT+AGG | 0.648368 | 1_4:+69783833 | Msa0181540:CDS |
| AGATGAGGATGCTATAGATG+AGG | 0.654047 | 1_4:+69786140 | Msa0181540:CDS |
| ACCGGCTTCCATTTCCATGG+GGG | 0.657686 | 1_4:-69783295 | None:intergenic |
| GTTTGCAACCAAGTTCGATG+AGG | 0.658878 | 1_4:+69784032 | Msa0181540:CDS |
| ACTAGTAGGAGTAATTGCAA+AGG | 0.660440 | 1_4:+69786376 | Msa0181540:three_prime_UTR |
| GTTGGAAGAAAATCGCCGGA+AGG | 0.664727 | 1_4:+69785969 | Msa0181540:CDS |
| AAGTCAAAATTCCACCATTG+GGG | 0.670613 | 1_4:-69783999 | None:intergenic |
| GGTGTAGAAGAGAACGACGC+CGG | 0.671853 | 1_4:-69783169 | None:intergenic |
| CAGAGTCATTCGTACTACGA+AGG | 0.677196 | 1_4:-69786277 | None:intergenic |
| AACTACATAGGCAACTACAG+TGG | 0.686317 | 1_4:-69784603 | None:intergenic |
| GTAGTATCCTCTATAAGACA+AGG | 0.691493 | 1_4:+69784681 | Msa0181540:CDS |
| GGCGGCGCGAACAACTCCGG+TGG | 0.695334 | 1_4:-69783190 | None:intergenic |
| TCTCATCTTAGCATTCAACA+AGG | 0.708282 | 1_4:+69784709 | Msa0181540:CDS |
| ATAGAATGTATGAAATAACA+GGG | 0.711420 | 1_4:-69786311 | None:intergenic |
| ACTCATCTGTCAAACATCAG+GGG | 0.713135 | 1_4:+69783868 | Msa0181540:CDS |
| GTGTTGATTAGGGCTTACGG+TGG | 0.717038 | 1_4:-69783219 | None:intergenic |
| GTCAGATTGAGATATTCACA+TGG | 0.740453 | 1_4:+69784534 | Msa0181540:CDS |
| CTCTCTCGGAGACAACACGC+CGG | 0.774524 | 1_4:+69783150 | Msa0181540:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCAAACAAAATTTATTT+AGG | + | chr1_4:69783369-69783388 | Msa0181540:intron | 10.0% |
| !! | AATATATATATATATATTGC+TGG | + | chr1_4:69784094-69784113 | Msa0181540:intron | 10.0% |
| !!! | TGTTTAAGTTATTATTTTAT+AGG | + | chr1_4:69785356-69785375 | Msa0181540:intron | 10.0% |
| !!! | TACAAAAAAAAACGTTTTTA+GGG | - | chr1_4:69783462-69783481 | None:intergenic | 15.0% |
| !!! | ATACAAAAAAAAACGTTTTT+AGG | - | chr1_4:69783463-69783482 | None:intergenic | 15.0% |
| !! | ATAAATAAATCATGACATTT+GGG | + | chr1_4:69784996-69785015 | Msa0181540:intron | 15.0% |
| !!! | ATTTTAACATTTCATTCAAT+TGG | + | chr1_4:69785230-69785249 | Msa0181540:intron | 15.0% |
| !! | ATAATAACTTAAACATGAAA+GGG | - | chr1_4:69785351-69785370 | None:intergenic | 15.0% |
| !! | AATAATAACTTAAACATGAA+AGG | - | chr1_4:69785352-69785371 | None:intergenic | 15.0% |
| !!! | TAATTTGAAATTGTGAATCA+TGG | + | chr1_4:69783502-69783521 | Msa0181540:intron | 20.0% |
| !! | AATATAACTCATTTGTGTTA+AGG | + | chr1_4:69783805-69783824 | Msa0181540:intron | 20.0% |
| !! | ATATAACTCATTTGTGTTAA+GGG | + | chr1_4:69783806-69783825 | Msa0181540:intron | 20.0% |
| !!! | TATATATATATTGCTGGTTA+TGG | + | chr1_4:69784100-69784119 | Msa0181540:intron | 20.0% |
| !!! | GTTTTACTTATATATGCATT+CGG | + | chr1_4:69784144-69784163 | Msa0181540:intron | 20.0% |
| !! | CATGAAAACAAATAAATTGT+TGG | - | chr1_4:69784377-69784396 | None:intergenic | 20.0% |
| !!! | TATCATTTTTATAGCTTTCA+AGG | - | chr1_4:69784832-69784851 | None:intergenic | 20.0% |
| !!! | TCTAATTGATAGTTTTATCT+CGG | + | chr1_4:69784911-69784930 | Msa0181540:intron | 20.0% |
| !! | GTTCAAATTAAGTACTTAAA+AGG | - | chr1_4:69784965-69784984 | None:intergenic | 20.0% |
| !! | GATAAATAAATCATGACATT+TGG | + | chr1_4:69784995-69785014 | Msa0181540:intron | 20.0% |
| !!! | AACTTTTAAGTTTAACAGAT+TGG | + | chr1_4:69785285-69785304 | Msa0181540:intron | 20.0% |
| !!! | ACTTTTAAGTTTAACAGATT+GGG | + | chr1_4:69785286-69785305 | Msa0181540:intron | 20.0% |
| !!! | AATTTGTTTTGTTTATCTAG+TGG | + | chr1_4:69785579-69785598 | Msa0181540:intron | 20.0% |
| !! | CAAAATCAAAAGTGAAATAA+TGG | - | chr1_4:69785848-69785867 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTGCATTTAGTT+AGG | + | chr1_4:69785857-69785876 | Msa0181540:intron | 20.0% |
| !! | ATAGAATGTATGAAATAACA+GGG | - | chr1_4:69786314-69786333 | None:intergenic | 20.0% |
| !! | TACTAGTATAAAAAACATCT+AGG | - | chr1_4:69786363-69786382 | None:intergenic | 20.0% |
| !!! | TAGATGTTTTTTATACTAGT+AGG | + | chr1_4:69786362-69786381 | Msa0181540:three_prime_UTR | 20.0% |
| !! | AAAACAGATACTAGATATAT+GGG | - | chr1_4:69786460-69786479 | None:intergenic | 20.0% |
| ! | GGAAAAAAACAAACAAAAAG+AGG | + | chr1_4:69783543-69783562 | Msa0181540:intron | 25.0% |
| !! | ATATCAATGTTAGAAGCATA+TGG | - | chr1_4:69783931-69783950 | None:intergenic | 25.0% |
| ! | ATTATACTGTACATGAGTTT+AGG | - | chr1_4:69784077-69784096 | None:intergenic | 25.0% |
| ! | GGCATAAAAAAAATTAAGCA+GGG | - | chr1_4:69784215-69784234 | None:intergenic | 25.0% |
| !!! | CTGCTTAATTTTTTTTATGC+CGG | + | chr1_4:69784214-69784233 | Msa0181540:intron | 25.0% |
| !!! | TGCTTAATTTTTTTTATGCC+GGG | + | chr1_4:69784215-69784234 | Msa0181540:intron | 25.0% |
| ! | TATACCAATAGCTTAATTAG+AGG | - | chr1_4:69784283-69784302 | None:intergenic | 25.0% |
| !!! | AAGGTGTTTGATTAATCTTT+TGG | - | chr1_4:69785051-69785070 | None:intergenic | 25.0% |
| ! | AAGTCTAACTCTTAATTCAT+AGG | - | chr1_4:69785108-69785127 | None:intergenic | 25.0% |
| !!! | CTTTTAAGTTTAACAGATTG+GGG | + | chr1_4:69785287-69785306 | Msa0181540:intron | 25.0% |
| ! | AACAAAACAAATTCGACAAA+AGG | - | chr1_4:69785572-69785591 | None:intergenic | 25.0% |
| ! | GATAGAATGTATGAAATAAC+AGG | - | chr1_4:69786315-69786334 | None:intergenic | 25.0% |
| ! | CAAAACAGATACTAGATATA+TGG | - | chr1_4:69786461-69786480 | None:intergenic | 25.0% |
| !!! | ATCTAGTATCTGTTTTGTTT+AGG | + | chr1_4:69786464-69786483 | Msa0181540:three_prime_UTR | 25.0% |
| !!! | TCTAGTATCTGTTTTGTTTA+GGG | + | chr1_4:69786465-69786484 | Msa0181540:three_prime_UTR | 25.0% |
| GTAAAGTGAAAGTGAATAAG+CGG | - | chr1_4:69783348-69783367 | None:intergenic | 30.0% | |
| TGAAATTGTGAATCATGGAA+TGG | + | chr1_4:69783507-69783526 | Msa0181540:intron | 30.0% | |
| !!! | TGGAATGGTTTTTGTTTTCA+AGG | + | chr1_4:69783522-69783541 | Msa0181540:intron | 30.0% |
| ATGAAGAAATTGGACATTGA+AGG | + | chr1_4:69783580-69783599 | Msa0181540:CDS | 30.0% | |
| !!! | ACAGGTTTTCTTTTGAAGTT+AGG | - | chr1_4:69783622-69783641 | None:intergenic | 30.0% |
| ! | TATCATCATTGTTGTTGGAA+TGG | + | chr1_4:69783642-69783661 | Msa0181540:CDS | 30.0% |
| CAATGAGTTACACAAAATCA+CGG | + | chr1_4:69783716-69783735 | Msa0181540:intron | 30.0% | |
| GAAACTATATTGTGCATGTT+TGG | - | chr1_4:69783753-69783772 | None:intergenic | 30.0% | |
| TTACTTATATATGCATTCGG+TGG | + | chr1_4:69784147-69784166 | Msa0181540:intron | 30.0% | |
| CTAGTATCAATGATATCAAG+AGG | - | chr1_4:69784182-69784201 | None:intergenic | 30.0% | |
| CGGCATAAAAAAAATTAAGC+AGG | - | chr1_4:69784216-69784235 | None:intergenic | 30.0% | |
| CATAAGATCAAACAAACTCA+AGG | - | chr1_4:69784248-69784267 | None:intergenic | 30.0% | |
| TTGTCCTCTAATTAAGCTAT+TGG | + | chr1_4:69784276-69784295 | Msa0181540:intron | 30.0% | |
| GGAACAAAAGTAAAACACAT+CGG | - | chr1_4:69784400-69784419 | None:intergenic | 30.0% | |
| TGCATATAAGTTCTGTAGAT+GGG | - | chr1_4:69784421-69784440 | None:intergenic | 30.0% | |
| TTGCATATAAGTTCTGTAGA+TGG | - | chr1_4:69784422-69784441 | None:intergenic | 30.0% | |
| ACAGAAATTACCTGAAATTG+AGG | - | chr1_4:69784464-69784483 | None:intergenic | 30.0% | |
| AACTATCAATTAGATCTCAC+AGG | - | chr1_4:69784905-69784924 | None:intergenic | 30.0% | |
| !!! | TTGATTAATCTTTTGGTGTC+AGG | - | chr1_4:69785044-69785063 | None:intergenic | 30.0% |
| TTATATGTGCAATTAGAGAG+AGG | - | chr1_4:69785180-69785199 | None:intergenic | 30.0% | |
| TTAAAAGATCTTATGCTTCG+TGG | + | chr1_4:69785207-69785226 | Msa0181540:intron | 30.0% | |
| GATTCAGCTCAAATATACAA+AGG | - | chr1_4:69785425-69785444 | None:intergenic | 30.0% | |
| AAACAAATTCGACAAAAGGA+AGG | - | chr1_4:69785568-69785587 | None:intergenic | 30.0% | |
| ! | TACAGTAATTTAAGATCAGC+TGG | + | chr1_4:69785698-69785717 | Msa0181540:CDS | 30.0% |
| !! | GATGATGATGATGTTGATTT+CGG | + | chr1_4:69786105-69786124 | Msa0181540:CDS | 30.0% |
| !! | ATGATGATGATGTTGATTTC+GGG | + | chr1_4:69786106-69786125 | Msa0181540:CDS | 30.0% |
| GTTCATAAAATCACATCAGA+AGG | - | chr1_4:69786193-69786212 | None:intergenic | 30.0% | |
| ! | GATGTGATTTTATGAACGTT+TGG | + | chr1_4:69786196-69786215 | Msa0181540:exon | 30.0% |
| GAAATAACAGGGCAATAAAT+CGG | - | chr1_4:69786303-69786322 | None:intergenic | 30.0% | |
| ! | ATTGTGAGATTTTCAAACTG+CGG | - | chr1_4:69786541-69786560 | None:intergenic | 30.0% |
| ATTTCTTCATAGACTCACTC+AGG | - | chr1_4:69783570-69783589 | None:intergenic | 35.0% | |
| GAGTGAGTCTATGAAGAAAT+TGG | + | chr1_4:69783570-69783589 | Msa0181540:CDS | 35.0% | |
| CCAACAACAATGATGATAAC+AGG | - | chr1_4:69783640-69783659 | None:intergenic | 35.0% | |
| CCTGTTATCATCATTGTTGT+TGG | + | chr1_4:69783637-69783656 | Msa0181540:CDS | 35.0% | |
| !! | ACGTAGTAGTTTTGCTGATT+TGG | + | chr1_4:69783782-69783801 | Msa0181540:intron | 35.0% |
| ATACTCATCTGTCAAACATC+AGG | + | chr1_4:69783866-69783885 | Msa0181540:CDS | 35.0% | |
| TACTCATCTGTCAAACATCA+GGG | + | chr1_4:69783867-69783886 | Msa0181540:CDS | 35.0% | |
| AAGTCAAAATTCCACCATTG+GGG | - | chr1_4:69784002-69784021 | None:intergenic | 35.0% | |
| GAAGTCAAAATTCCACCATT+GGG | - | chr1_4:69784003-69784022 | None:intergenic | 35.0% | |
| AGAAGTCAAAATTCCACCAT+TGG | - | chr1_4:69784004-69784023 | None:intergenic | 35.0% | |
| AAACTTAACCTCATCGAACT+TGG | - | chr1_4:69784043-69784062 | None:intergenic | 35.0% | |
| GTTTACATTGTCATTGTCAG+TGG | + | chr1_4:69784320-69784339 | Msa0181540:intron | 35.0% | |
| TGTTTATGCTCCTCAATTTC+AGG | + | chr1_4:69784451-69784470 | Msa0181540:intron | 35.0% | |
| TCAACTTGACTATGTTCTTG+TGG | + | chr1_4:69784502-69784521 | Msa0181540:CDS | 35.0% | |
| GTCAGATTGAGATATTCACA+TGG | + | chr1_4:69784534-69784553 | Msa0181540:CDS | 35.0% | |
| ATGTTGCTCATAAAAGTGGT+AGG | - | chr1_4:69784650-69784669 | None:intergenic | 35.0% | |
| AAGCATGTTGCTCATAAAAG+TGG | - | chr1_4:69784654-69784673 | None:intergenic | 35.0% | |
| GTAGTATCCTCTATAAGACA+AGG | + | chr1_4:69784681-69784700 | Msa0181540:CDS | 35.0% | |
| TTGTTGAATGCTAAGATGAG+AGG | - | chr1_4:69784710-69784729 | None:intergenic | 35.0% | |
| TCTCATCTTAGCATTCAACA+AGG | + | chr1_4:69784709-69784728 | Msa0181540:CDS | 35.0% | |
| CAAAATCAACAATACCTCCA+AGG | - | chr1_4:69784759-69784778 | None:intergenic | 35.0% | |
| !! | GTCTTTTAACTCACTACAAC+AGG | + | chr1_4:69784870-69784889 | Msa0181540:intron | 35.0% |
| !! | GAACTTGATAGCTGTTTTCA+AGG | - | chr1_4:69785070-69785089 | None:intergenic | 35.0% |
| GAAAACAGCTATCAAGTTCA+TGG | + | chr1_4:69785071-69785090 | Msa0181540:intron | 35.0% | |
| TTTAACAGATTGGGGTGAAA+TGG | + | chr1_4:69785295-69785314 | Msa0181540:intron | 35.0% | |
| TTAACAGATTGGGGTGAAAT+GGG | + | chr1_4:69785296-69785315 | Msa0181540:intron | 35.0% | |
| ! | AACCATTTTCCTGTAGTTTC+AGG | + | chr1_4:69785384-69785403 | Msa0181540:intron | 35.0% |
| ! | ACCATTTTCCTGTAGTTTCA+GGG | + | chr1_4:69785385-69785404 | Msa0181540:intron | 35.0% |
| GCTCAAATATACAAAGGAAG+AGG | - | chr1_4:69785419-69785438 | None:intergenic | 35.0% | |
| TCTGTTCAACAGAATTGACT+GGG | - | chr1_4:69785500-69785519 | None:intergenic | 35.0% | |
| TTCTGTTCAACAGAATTGAC+TGG | - | chr1_4:69785501-69785520 | None:intergenic | 35.0% | |
| !! | CTAGTGGATGAAAGATTTTG+AGG | + | chr1_4:69785595-69785614 | Msa0181540:intron | 35.0% |
| CAAGAGCAGTTAATACTTGT+AGG | - | chr1_4:69785801-69785820 | None:intergenic | 35.0% | |
| ! | GTTAGGTTGTATGTCTTTGA+TGG | + | chr1_4:69785874-69785893 | Msa0181540:intron | 35.0% |
| AGGAGAACATGGATAAACTT+AGG | + | chr1_4:69785989-69786008 | Msa0181540:CDS | 35.0% | |
| AGAACATGGATAAACTTAGG+AGG | + | chr1_4:69785992-69786011 | Msa0181540:CDS | 35.0% | |
| GAACATGGATAAACTTAGGA+GGG | + | chr1_4:69785993-69786012 | Msa0181540:CDS | 35.0% | |
| !! | CACTGGTTTGAAAAACAAAG+AGG | + | chr1_4:69786053-69786072 | Msa0181540:CDS | 35.0% |
| TGGTTTGAAAAACAAAGAGG+AGG | + | chr1_4:69786056-69786075 | Msa0181540:CDS | 35.0% | |
| TATGAACGTTTGGATTGCAT+CGG | + | chr1_4:69786206-69786225 | Msa0181540:three_prime_UTR | 35.0% | |
| TATAGGACCTTGACTTCATT+TGG | + | chr1_4:69786241-69786260 | Msa0181540:three_prime_UTR | 35.0% | |
| CTATCAGCATTATTCTCTCT+AGG | + | chr1_4:69786330-69786349 | Msa0181540:three_prime_UTR | 35.0% | |
| ACTAGTAGGAGTAATTGCAA+AGG | + | chr1_4:69786376-69786395 | Msa0181540:three_prime_UTR | 35.0% | |
| ATTTGCACAAAAATCGAGCA+TGG | - | chr1_4:69786405-69786424 | None:intergenic | 35.0% | |
| ! | CTCGATTTTTGTGCAAATTG+AGG | + | chr1_4:69786407-69786426 | Msa0181540:three_prime_UTR | 35.0% |
| !! | AGAAAGTACTTGAGAGTCAC+CGG | - | chr1_4:69783316-69783335 | None:intergenic | 40.0% |
| ! | ATCATTGTTGTTGGAATGGC+AGG | + | chr1_4:69783646-69783665 | Msa0181540:CDS | 40.0% |
| ACTCATTTGTGTTAAGGGAG+TGG | + | chr1_4:69783811-69783830 | Msa0181540:intron | 40.0% | |
| CTCATTTGTGTTAAGGGAGT+GGG | + | chr1_4:69783812-69783831 | Msa0181540:intron | 40.0% | |
| ACTCATCTGTCAAACATCAG+GGG | + | chr1_4:69783868-69783887 | Msa0181540:CDS | 40.0% | |
| TTATGTGATGAATCTCGACC+CGG | + | chr1_4:69783891-69783910 | Msa0181540:CDS | 40.0% | |
| GTCATGAAGCAATTCAACCT+TGG | + | chr1_4:69783976-69783995 | Msa0181540:CDS | 40.0% | |
| TATGTTCTTGTGGATACTCC+TGG | + | chr1_4:69784512-69784531 | Msa0181540:CDS | 40.0% | |
| GTGAATATCTCAATCTGACC+AGG | - | chr1_4:69784533-69784552 | None:intergenic | 40.0% | |
| ATATTCACATGGTCTGCTTC+TGG | + | chr1_4:69784545-69784564 | Msa0181540:CDS | 40.0% | |
| ACTACATAGGCAACTACAGT+GGG | - | chr1_4:69784605-69784624 | None:intergenic | 40.0% | |
| AACTACATAGGCAACTACAG+TGG | - | chr1_4:69784606-69784625 | None:intergenic | 40.0% | |
| ACGAGGTGTATCAACTACAT+AGG | - | chr1_4:69784618-69784637 | None:intergenic | 40.0% | |
| GAGGTAACCTTGTCTTATAG+AGG | - | chr1_4:69784691-69784710 | None:intergenic | 40.0% | |
| GGTGAAATGGGAAGCAATAT+TGG | + | chr1_4:69785308-69785327 | Msa0181540:intron | 40.0% | |
| ACCCTGAAACTACAGGAAAA+TGG | - | chr1_4:69785389-69785408 | None:intergenic | 40.0% | |
| TCCTGTAGTTTCAGGGTTTA+TGG | + | chr1_4:69785392-69785411 | Msa0181540:intron | 40.0% | |
| CCTGTAGTTTCAGGGTTTAT+GGG | + | chr1_4:69785393-69785412 | Msa0181540:intron | 40.0% | |
| CAACAGAATTGACTGGGTAT+TGG | - | chr1_4:69785494-69785513 | None:intergenic | 40.0% | |
| TTTAACTCAGAGCCTTTCTC+TGG | + | chr1_4:69785661-69785680 | Msa0181540:CDS | 40.0% | |
| GTTTATCCATGTTCTCCTTC+CGG | - | chr1_4:69785987-69786006 | None:intergenic | 40.0% | |
| AGATGAGGATGCTATAGATG+AGG | + | chr1_4:69786140-69786159 | Msa0181540:CDS | 40.0% | |
| GCATGTACCAAATGAAGTCA+AGG | - | chr1_4:69786251-69786270 | None:intergenic | 40.0% | |
| ! | AGATTTTCAAACTGCGGATG+TGG | - | chr1_4:69786535-69786554 | None:intergenic | 40.0% |
| !! | AGGGTGTTGATTAGGGCTTA+CGG | - | chr1_4:69783225-69783244 | None:intergenic | 45.0% |
| AAGTGAATAAGCGGCGAGTT+TGG | - | chr1_4:69783339-69783358 | None:intergenic | 45.0% | |
| GACATTGAAGGTTCCTCTTC+TGG | + | chr1_4:69783592-69783611 | Msa0181540:CDS | 45.0% | |
| GAAGTTAGGTGAACCAGAAG+AGG | - | chr1_4:69783608-69783627 | None:intergenic | 45.0% | |
| GGAAGACTACACTCATGCAT+AGG | + | chr1_4:69783833-69783852 | Msa0181540:CDS | 45.0% | |
| GACTACACTCATGCATAGGT+TGG | + | chr1_4:69783837-69783856 | Msa0181540:CDS | 45.0% | |
| !! | TATGGAAGTGTCATGACAGC+CGG | - | chr1_4:69783913-69783932 | None:intergenic | 45.0% |
| GTTTGCAACCAAGTTCGATG+AGG | + | chr1_4:69784032-69784051 | Msa0181540:CDS | 45.0% | |
| CAAACTCAAGGAAAGCTACC+CGG | - | chr1_4:69784236-69784255 | None:intergenic | 45.0% | |
| ! | CATTGTCAGTGGCTCGTTTT+AGG | + | chr1_4:69784331-69784350 | Msa0181540:intron | 45.0% |
| AACTACAGTGGGAAATGTGG+AGG | - | chr1_4:69784594-69784613 | None:intergenic | 45.0% | |
| AGCACAACATGAGTTTGCCT+TGG | + | chr1_4:69784739-69784758 | Msa0181540:CDS | 45.0% | |
| ACAACATGAGTTTGCCTTGG+AGG | + | chr1_4:69784742-69784761 | Msa0181540:CDS | 45.0% | |
| CCCATAAACCCTGAAACTAC+AGG | - | chr1_4:69785396-69785415 | None:intergenic | 45.0% | |
| ATTCATCCAGTGCCAGAGAA+AGG | - | chr1_4:69785676-69785695 | None:intergenic | 45.0% | |
| TTCCATGTATTCCTCTGCAC+TGG | - | chr1_4:69785777-69785796 | None:intergenic | 45.0% | |
| ACGTGAAGAGAAACAGCTGT+TGG | + | chr1_4:69785951-69785970 | Msa0181540:CDS | 45.0% | |
| AGCTGTTGGAAGAAAATCGC+CGG | + | chr1_4:69785965-69785984 | Msa0181540:CDS | 45.0% | |
| GGATAAACTTAGGAGGGAGA+TGG | + | chr1_4:69785999-69786018 | Msa0181540:CDS | 45.0% | |
| ! | GAAACTGTAGTGTTGAGCAC+TGG | + | chr1_4:69786036-69786055 | Msa0181540:CDS | 45.0% |
| GAAAAACAAAGAGGAGGACG+AGG | + | chr1_4:69786062-69786081 | Msa0181540:CDS | 45.0% | |
| GGATGAAGAGGATGAGGAAA+TGG | + | chr1_4:69786083-69786102 | Msa0181540:CDS | 45.0% | |
| AGATGAGGACGAAGATGAAG+AGG | + | chr1_4:69786155-69786174 | Msa0181540:CDS | 45.0% | |
| ATCGGAACTAGCGCTTGTAT+AGG | + | chr1_4:69786224-69786243 | Msa0181540:three_prime_UTR | 45.0% | |
| CAGAGTCATTCGTACTACGA+AGG | - | chr1_4:69786280-69786299 | None:intergenic | 45.0% | |
| GTCGTTCTCTTCTACACCAC+CGG | + | chr1_4:69783174-69783193 | Msa0181540:five_prime_UTR | 50.0% | |
| TAGGGCTTACGGTGGTGATA+AGG | - | chr1_4:69783214-69783233 | None:intergenic | 50.0% | |
| !! | GTGTTGATTAGGGCTTACGG+TGG | - | chr1_4:69783222-69783241 | None:intergenic | 50.0% |
| !! | GTTGCGGAGGGTGTTGATTA+GGG | - | chr1_4:69783232-69783251 | None:intergenic | 50.0% |
| !! | TGTTGCGGAGGGTGTTGATT+AGG | - | chr1_4:69783233-69783252 | None:intergenic | 50.0% |
| AATCAACACCCTCCGCAACA+TGG | + | chr1_4:69783233-69783252 | Msa0181540:exon | 50.0% | |
| CGTTATCTGCGTCCATGTTG+CGG | - | chr1_4:69783248-69783267 | None:intergenic | 50.0% | |
| !! | ATTTCCATGGGGGTGTCTTC+GGG | - | chr1_4:69783288-69783307 | None:intergenic | 50.0% |
| !! | CATTTCCATGGGGGTGTCTT+CGG | - | chr1_4:69783289-69783308 | None:intergenic | 50.0% |
| !! | TCACCGGCTTCCATTTCCAT+GGG | - | chr1_4:69783300-69783319 | None:intergenic | 50.0% |
| GAGTAACGCTGTGTCTATCG+TGG | - | chr1_4:69783426-69783445 | None:intergenic | 50.0% | |
| !! | ATGGAAGTGTCATGACAGCC+GGG | - | chr1_4:69783912-69783931 | None:intergenic | 50.0% |
| CAATTCAACCTTGGCCCCAA+TGG | + | chr1_4:69783985-69784004 | Msa0181540:CDS | 50.0% | |
| AAATTCCACCATTGGGGCCA+AGG | - | chr1_4:69783996-69784015 | None:intergenic | 50.0% | |
| GGCAACTACAGTGGGAAATG+TGG | - | chr1_4:69784597-69784616 | None:intergenic | 50.0% | |
| ! | GTGGTAGGATTTTCTGCACG+AGG | - | chr1_4:69784635-69784654 | None:intergenic | 50.0% |
| TTTGGGCTGTGTCTGTGATG+AGG | + | chr1_4:69785013-69785032 | Msa0181540:intron | 50.0% | |
| GCTGTGTCTGTGATGAGGTT+TGG | + | chr1_4:69785018-69785037 | Msa0181540:intron | 50.0% | |
| GATCTGAACTTGCAGCTGCT+TGG | - | chr1_4:69785625-69785644 | None:intergenic | 50.0% | |
| GCTGGAGTTTCTGCAGTTAC+TGG | + | chr1_4:69785716-69785735 | Msa0181540:CDS | 50.0% | |
| GTTTCTGCAGTTACTGGTGC+TGG | + | chr1_4:69785722-69785741 | Msa0181540:CDS | 50.0% | |
| ! | GTTACTGGTGCTGGAATCGA+AGG | + | chr1_4:69785731-69785750 | Msa0181540:CDS | 50.0% |
| AGCCAGTGCAGAGGAATACA+TGG | + | chr1_4:69785772-69785791 | Msa0181540:CDS | 50.0% | |
| GTTGGAAGAAAATCGCCGGA+AGG | + | chr1_4:69785969-69785988 | Msa0181540:CDS | 50.0% | |
| AAATCGCCGGAAGGAGAACA+TGG | + | chr1_4:69785978-69785997 | Msa0181540:CDS | 50.0% | |
| AGGAGGGAGATGGAGAAATC+TGG | + | chr1_4:69786009-69786028 | Msa0181540:CDS | 50.0% | |
| AGGGAGATGGAGAAATCTGG+AGG | + | chr1_4:69786012-69786031 | Msa0181540:CDS | 50.0% | |
| CGGGACATACACTGAAGATG+AGG | + | chr1_4:69786125-69786144 | Msa0181540:CDS | 50.0% | |
| GGTGTAGAAGAGAACGACGC+CGG | - | chr1_4:69783172-69783191 | None:intergenic | 55.0% | |
| GGCTTACGGTGGTGATAAGG+CGG | - | chr1_4:69783211-69783230 | None:intergenic | 55.0% | |
| ATCTGCGTCCATGTTGCGGA+GGG | - | chr1_4:69783244-69783263 | None:intergenic | 55.0% | |
| TATCTGCGTCCATGTTGCGG+AGG | - | chr1_4:69783245-69783264 | None:intergenic | 55.0% | |
| !! | TTTCCATGGGGGTGTCTTCG+GGG | - | chr1_4:69783287-69783306 | None:intergenic | 55.0% |
| CGAAGACACCCCCATGGAAA+TGG | + | chr1_4:69783287-69783306 | Msa0181540:CDS | 55.0% | |
| ACCCCCATGGAAATGGAAGC+CGG | + | chr1_4:69783294-69783313 | Msa0181540:CDS | 55.0% | |
| ! | ACCGGCTTCCATTTCCATGG+GGG | - | chr1_4:69783298-69783317 | None:intergenic | 55.0% |
| !! | CACCGGCTTCCATTTCCATG+GGG | - | chr1_4:69783299-69783318 | None:intergenic | 55.0% |
| !! | GTCACCGGCTTCCATTTCCA+TGG | - | chr1_4:69783301-69783320 | None:intergenic | 55.0% |
| GTTGGAATGGCAGGTCAGTC+AGG | + | chr1_4:69783655-69783674 | Msa0181540:intron | 55.0% | |
| TTCAACCTTGGCCCCAATGG+TGG | + | chr1_4:69783988-69784007 | Msa0181540:CDS | 55.0% | |
| TCAGAGCCTTTCTCTGGCAC+TGG | + | chr1_4:69785667-69785686 | Msa0181540:CDS | 55.0% | |
| AGCTGTTGAAGCCAGTGCAG+AGG | + | chr1_4:69785763-69785782 | Msa0181540:CDS | 55.0% | |
| AGAGGAGGACGAGGATGAAG+AGG | + | chr1_4:69786071-69786090 | Msa0181540:CDS | 55.0% | |
| GGACGAGGATGAAGAGGATG+AGG | + | chr1_4:69786077-69786096 | Msa0181540:CDS | 55.0% | |
| CACACACACGCGAGCTCTCT+CGG | + | chr1_4:69783136-69783155 | Msa0181540:five_prime_UTR | 60.0% | |
| CTCTCTCGGAGACAACACGC+CGG | + | chr1_4:69783150-69783169 | Msa0181540:five_prime_UTR | 60.0% | |
| TAAGGCGGCGCGAACAACTC+CGG | - | chr1_4:69783196-69783215 | None:intergenic | 60.0% | |
| TAACCCCGAAGACACCCCCA+TGG | + | chr1_4:69783281-69783300 | Msa0181540:CDS | 60.0% | |
| GGCGGCGCGAACAACTCCGG+TGG | - | chr1_4:69783193-69783212 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 69783110 | 69786579 | 69783110 | ID=Msa0181540;Name=Msa0181540 |
| chr1_4 | mRNA | 69783110 | 69786579 | 69783110 | ID=Msa0181540-mRNA-1;Parent=Msa0181540;Name=Msa0181540-mRNA-1;_AED=0.10;_eAED=0.10;_QI=142|1|1|1|1|1|6|382|395 |
| chr1_4 | exon | 69783110 | 69783326 | 69783110 | ID=Msa0181540-mRNA-1:exon:23206;Parent=Msa0181540-mRNA-1 |
| chr1_4 | exon | 69783544 | 69783667 | 69783544 | ID=Msa0181540-mRNA-1:exon:23207;Parent=Msa0181540-mRNA-1 |
| chr1_4 | exon | 69783827 | 69784053 | 69783827 | ID=Msa0181540-mRNA-1:exon:23208;Parent=Msa0181540-mRNA-1 |
| chr1_4 | exon | 69784473 | 69784763 | 69784473 | ID=Msa0181540-mRNA-1:exon:23209;Parent=Msa0181540-mRNA-1 |
| chr1_4 | exon | 69785599 | 69785804 | 69785599 | ID=Msa0181540-mRNA-1:exon:23210;Parent=Msa0181540-mRNA-1 |
| chr1_4 | exon | 69785933 | 69786579 | 69785933 | ID=Msa0181540-mRNA-1:exon:23211;Parent=Msa0181540-mRNA-1 |
| chr1_4 | five_prime_UTR | 69783110 | 69783251 | 69783110 | ID=Msa0181540-mRNA-1:five_prime_utr;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69783252 | 69783326 | 69783252 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69783544 | 69783667 | 69783544 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69783827 | 69784053 | 69783827 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69784473 | 69784763 | 69784473 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69785599 | 69785804 | 69785599 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | CDS | 69785933 | 69786197 | 69785933 | ID=Msa0181540-mRNA-1:cds;Parent=Msa0181540-mRNA-1 |
| chr1_4 | three_prime_UTR | 69786198 | 69786579 | 69786198 | ID=Msa0181540-mRNA-1:three_prime_utr;Parent=Msa0181540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
