Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076120 | XP_003592221.1 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076120 | sp|Q8W586|QQT2_ARATH | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076120 | G7IEN9 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049750 | Msa0076120 | 0.802136 | 6.474994e-49 | -8.615850e-47 |
| Msa0076120 | Msa0133410 | 0.992754 | 3.120653e-195 | -8.615850e-47 |
| Msa0076120 | Msa0181540 | 0.975342 | 8.880230e-140 | -8.615850e-47 |
| Msa0076120 | Msa0184820 | 0.997544 | 1.846602e-244 | -8.615850e-47 |
| Msa0076120 | Msa0184880 | 0.979165 | 2.257994e-147 | -8.615850e-47 |
| Msa0076120 | Msa0502090 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0076120 | Msa0791150 | 0.984810 | 1.179985e-161 | -8.615850e-47 |
| Msa0076120 | Msa1208380 | 0.811434 | 7.014564e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076120 | MtrunA17_Chr1g0202821 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 803 |
| Msa0076120 | MtrunA17_Chr3g0119231 | 29.255 | 188 | 128 | 3 | 61 | 245 | 6 | 191 | 4.38e-19 | 86.3 |
| Msa0076120 | MtrunA17_Chr8g0364001 | 30.688 | 189 | 122 | 3 | 61 | 244 | 6 | 190 | 9.52e-19 | 85.9 |
| Msa0076120 | MtrunA17_Chr5g0442031 | 39.506 | 81 | 49 | 0 | 61 | 141 | 6 | 86 | 1.44e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076120 | AT4G21800.2 | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Msa0076120 | AT4G21800.1 | 72.571 | 350 | 95 | 1 | 19 | 368 | 4 | 352 | 0.0 | 531 |
| Msa0076120 | AT4G12790.4 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT4G12790.2 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT4G12790.6 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT4G12790.5 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT4G12790.1 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT4G12790.3 | 30.857 | 175 | 118 | 3 | 61 | 233 | 6 | 179 | 5.86e-19 | 86.7 |
| Msa0076120 | AT5G22370.2 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
| Msa0076120 | AT5G22370.3 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
| Msa0076120 | AT5G22370.1 | 27.957 | 186 | 131 | 3 | 61 | 244 | 6 | 190 | 1.60e-15 | 77.0 |
Find 112 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTGAAGGTTCCTCTTC+TGG | 0.208586 | 1_2:-51936799 | Msa0076120:CDS |
| CAAAACAGATACTAGATATA+TGG | 0.237911 | 1_2:+51933934 | None:intergenic |
| TGTTGCGGAGGGTGTTGATT+AGG | 0.252127 | 1_2:+51937161 | None:intergenic |
| GCTGGAGTTTCTGCAGTTAC+TGG | 0.283127 | 1_2:-51934676 | Msa0076120:CDS |
| GATGATGATGATGTTGATTT+CGG | 0.300467 | 1_2:-51934287 | Msa0076120:CDS |
| GTTGCGGAGGGTGTTGATTA+GGG | 0.319457 | 1_2:+51937162 | None:intergenic |
| CCTGTTATCATCATTGTTGT+TGG | 0.328714 | 1_2:-51936754 | Msa0076120:CDS |
| GATAGAATGTATGAAATAAC+AGG | 0.330341 | 1_2:+51934080 | None:intergenic |
| ATGATGATGATGTTGATTTC+GGG | 0.336647 | 1_2:-51934286 | Msa0076120:CDS |
| CCAACAACAATGATGATAAC+AGG | 0.357092 | 1_2:+51936754 | None:intergenic |
| GTTTATCCATGTTCTCCTTC+CGG | 0.357858 | 1_2:+51934408 | None:intergenic |
| TATAGGACCTTGACTTCATT+TGG | 0.361838 | 1_2:-51934151 | Msa0076120:three_prime_UTR |
| ATATTCACATGGTCTGCTTC+TGG | 0.363085 | 1_2:-51935847 | Msa0076120:CDS |
| GAGTGAGTCTATGAAGAAAT+TGG | 0.370198 | 1_2:-51936821 | Msa0076120:CDS |
| GAAGTCAAAATTCCACCATT+GGG | 0.397466 | 1_2:+51936391 | None:intergenic |
| TACAGTAATTTAAGATCAGC+TGG | 0.416370 | 1_2:-51934694 | Msa0076120:CDS |
| ATCATTGTTGTTGGAATGGC+AGG | 0.426570 | 1_2:-51936745 | Msa0076120:intron |
| GTTTCTGCAGTTACTGGTGC+TGG | 0.428710 | 1_2:-51934670 | Msa0076120:CDS |
| TTCCATGTATTCCTCTGCAC+TGG | 0.431616 | 1_2:+51934618 | None:intergenic |
| GAAATAACAGGGCAATAAAT+CGG | 0.435791 | 1_2:+51934092 | None:intergenic |
| GGATGAAGAGGATGAGGAAA+TGG | 0.438782 | 1_2:-51934309 | Msa0076120:CDS |
| ATACTCATCTGTCAAACATC+AGG | 0.441997 | 1_2:-51936525 | Msa0076120:CDS |
| TTTAACTCAGAGCCTTTCTC+TGG | 0.457020 | 1_2:-51934731 | Msa0076120:CDS |
| AAACTTAACCTCATCGAACT+TGG | 0.460043 | 1_2:+51936351 | None:intergenic |
| CTCATTTGTGTTAAGGGAGT+GGG | 0.461516 | 1_2:-51936579 | Msa0076120:intron |
| ATGAAGAAATTGGACATTGA+AGG | 0.465533 | 1_2:-51936811 | Msa0076120:CDS |
| AAAACAGATACTAGATATAT+GGG | 0.466514 | 1_2:+51933935 | None:intergenic |
| GGACGAGGATGAAGAGGATG+AGG | 0.467374 | 1_2:-51934315 | Msa0076120:CDS |
| CACACACACGCGAGCTCTCT+CGG | 0.468404 | 1_2:-51937255 | Msa0076120:five_prime_UTR |
| ACAACATGAGTTTGCCTTGG+AGG | 0.468476 | 1_2:-51935650 | Msa0076120:intron |
| AAATTCCACCATTGGGGCCA+AGG | 0.471975 | 1_2:+51936398 | None:intergenic |
| TAGGGCTTACGGTGGTGATA+AGG | 0.472410 | 1_2:+51937180 | None:intergenic |
| AGGAGGGAGATGGAGAAATC+TGG | 0.473893 | 1_2:-51934383 | Msa0076120:CDS |
| GATCTGAACTTGCAGCTGCT+TGG | 0.481512 | 1_2:+51934770 | None:intergenic |
| GTCACCGGCTTCCATTTCCA+TGG | 0.485145 | 1_2:+51937093 | None:intergenic |
| TCACCGGCTTCCATTTCCAT+GGG | 0.489818 | 1_2:+51937094 | None:intergenic |
| ATATCAATGTTAGAAGCATA+TGG | 0.489870 | 1_2:+51936463 | None:intergenic |
| CAATTCAACCTTGGCCCCAA+TGG | 0.493147 | 1_2:-51936406 | Msa0076120:CDS |
| AGAAGTCAAAATTCCACCAT+TGG | 0.493187 | 1_2:+51936390 | None:intergenic |
| TCAGAGCCTTTCTCTGGCAC+TGG | 0.495072 | 1_2:-51934725 | Msa0076120:CDS |
| CTATCAGCATTATTCTCTCT+AGG | 0.500275 | 1_2:-51934062 | Msa0076120:three_prime_UTR |
| AGCACAACATGAGTTTGCCT+TGG | 0.507905 | 1_2:-51935653 | Msa0076120:CDS |
| AAGCATGTTGCTCATAAAAG+TGG | 0.519169 | 1_2:+51935741 | None:intergenic |
| AGGAGAACATGGATAAACTT+AGG | 0.522057 | 1_2:-51934403 | Msa0076120:CDS |
| TATGGAAGTGTCATGACAGC+CGG | 0.522098 | 1_2:+51936481 | None:intergenic |
| TCAACTTGACTATGTTCTTG+TGG | 0.522799 | 1_2:-51935890 | Msa0076120:CDS |
| ATTCATCCAGTGCCAGAGAA+AGG | 0.526358 | 1_2:+51934719 | None:intergenic |
| CGTTATCTGCGTCCATGTTG+CGG | 0.534923 | 1_2:+51937146 | None:intergenic |
| TTCAACCTTGGCCCCAATGG+TGG | 0.539374 | 1_2:-51936403 | Msa0076120:CDS |
| AGCCAGTGCAGAGGAATACA+TGG | 0.540021 | 1_2:-51934620 | Msa0076120:CDS |
| TATGTTCTTGTGGATACTCC+TGG | 0.544128 | 1_2:-51935880 | Msa0076120:CDS |
| GAAGTTAGGTGAACCAGAAG+AGG | 0.546699 | 1_2:+51936786 | None:intergenic |
| ATCGGAACTAGCGCTTGTAT+AGG | 0.552743 | 1_2:-51934168 | Msa0076120:three_prime_UTR |
| TATCATCATTGTTGTTGGAA+TGG | 0.555919 | 1_2:-51936749 | Msa0076120:CDS |
| AGAGGAGGACGAGGATGAAG+AGG | 0.556313 | 1_2:-51934321 | Msa0076120:CDS |
| TATGAACGTTTGGATTGCAT+CGG | 0.557691 | 1_2:-51934186 | Msa0076120:three_prime_UTR |
| GGATAAACTTAGGAGGGAGA+TGG | 0.557760 | 1_2:-51934393 | Msa0076120:CDS |
| GTCGTTCTCTTCTACACCAC+CGG | 0.560461 | 1_2:-51937217 | Msa0076120:five_prime_UTR |
| AGAAAGTACTTGAGAGTCAC+CGG | 0.565078 | 1_2:+51937078 | None:intergenic |
| ATCTGCGTCCATGTTGCGGA+GGG | 0.565997 | 1_2:+51937150 | None:intergenic |
| GACTACACTCATGCATAGGT+TGG | 0.567808 | 1_2:-51936554 | Msa0076120:CDS |
| GTTACTGGTGCTGGAATCGA+AGG | 0.568425 | 1_2:-51934661 | Msa0076120:CDS |
| GAAACTGTAGTGTTGAGCAC+TGG | 0.570041 | 1_2:-51934356 | Msa0076120:CDS |
| AGCTGTTGGAAGAAAATCGC+CGG | 0.572545 | 1_2:-51934427 | Msa0076120:CDS |
| AAATCGCCGGAAGGAGAACA+TGG | 0.572726 | 1_2:-51934414 | Msa0076120:CDS |
| TACTCATCTGTCAAACATCA+GGG | 0.573701 | 1_2:-51936524 | Msa0076120:CDS |
| ATGGAAGTGTCATGACAGCC+GGG | 0.578869 | 1_2:+51936482 | None:intergenic |
| GGCAACTACAGTGGGAAATG+TGG | 0.579709 | 1_2:+51935798 | None:intergenic |
| ATTTCTTCATAGACTCACTC+AGG | 0.587164 | 1_2:+51936824 | None:intergenic |
| GTGAATATCTCAATCTGACC+AGG | 0.587935 | 1_2:+51935862 | None:intergenic |
| AGAACATGGATAAACTTAGG+AGG | 0.588077 | 1_2:-51934400 | Msa0076120:CDS |
| GTTCATAAAATCACATCAGA+AGG | 0.589818 | 1_2:+51934202 | None:intergenic |
| TAAGGCGGCGCGAACAACTC+CGG | 0.589916 | 1_2:+51937198 | None:intergenic |
| GCATGTACCAAATGAAGTCA+AGG | 0.590004 | 1_2:+51934144 | None:intergenic |
| AATCAACACCCTCCGCAACA+TGG | 0.591565 | 1_2:-51937158 | Msa0076120:exon |
| AGATGAGGACGAAGATGAAG+AGG | 0.599265 | 1_2:-51934237 | Msa0076120:CDS |
| GTCATGAAGCAATTCAACCT+TGG | 0.600059 | 1_2:-51936415 | Msa0076120:CDS |
| AGGGAGATGGAGAAATCTGG+AGG | 0.604309 | 1_2:-51934380 | Msa0076120:CDS |
| AGGGTGTTGATTAGGGCTTA+CGG | 0.604717 | 1_2:+51937169 | None:intergenic |
| ACTACATAGGCAACTACAGT+GGG | 0.605400 | 1_2:+51935790 | None:intergenic |
| ACGAGGTGTATCAACTACAT+AGG | 0.606135 | 1_2:+51935777 | None:intergenic |
| ACGTGAAGAGAAACAGCTGT+TGG | 0.606507 | 1_2:-51934441 | Msa0076120:CDS |
| GAACATGGATAAACTTAGGA+GGG | 0.606999 | 1_2:-51934399 | Msa0076120:CDS |
| TTATGTGATGAATCTCGACC+CGG | 0.607451 | 1_2:-51936500 | Msa0076120:CDS |
| GAGGTAACCTTGTCTTATAG+AGG | 0.608238 | 1_2:+51935704 | None:intergenic |
| CAAAATCAACAATACCTCCA+AGG | 0.609268 | 1_2:+51935636 | None:intergenic |
| GGCTTACGGTGGTGATAAGG+CGG | 0.619827 | 1_2:+51937183 | None:intergenic |
| TTGTTGAATGCTAAGATGAG+AGG | 0.620285 | 1_2:+51935685 | None:intergenic |
| AACTACAGTGGGAAATGTGG+AGG | 0.621918 | 1_2:+51935801 | None:intergenic |
| ATGTTGCTCATAAAAGTGGT+AGG | 0.622477 | 1_2:+51935745 | None:intergenic |
| AGCTGTTGAAGCCAGTGCAG+AGG | 0.624332 | 1_2:-51934629 | Msa0076120:CDS |
| CGGGACATACACTGAAGATG+AGG | 0.626150 | 1_2:-51934267 | Msa0076120:CDS |
| CACCGGCTTCCATTTCCATG+GGG | 0.630823 | 1_2:+51937095 | None:intergenic |
| TATCTGCGTCCATGTTGCGG+AGG | 0.634849 | 1_2:+51937149 | None:intergenic |
| GGAAGACTACACTCATGCAT+AGG | 0.648368 | 1_2:-51936558 | Msa0076120:CDS |
| AGATGAGGATGCTATAGATG+AGG | 0.654047 | 1_2:-51934252 | Msa0076120:CDS |
| ACCGGCTTCCATTTCCATGG+GGG | 0.657686 | 1_2:+51937096 | None:intergenic |
| GTTTGCAACCAAGTTCGATG+AGG | 0.658878 | 1_2:-51936359 | Msa0076120:intron |
| ACTAGTAGGAGTAATTGCAA+AGG | 0.660440 | 1_2:-51934016 | Msa0076120:three_prime_UTR |
| GTTGGAAGAAAATCGCCGGA+AGG | 0.664727 | 1_2:-51934423 | Msa0076120:CDS |
| AAGTCAAAATTCCACCATTG+GGG | 0.670613 | 1_2:+51936392 | None:intergenic |
| GGTGTAGAAGAGAACGACGC+CGG | 0.671853 | 1_2:+51937222 | None:intergenic |
| CAGAGTCATTCGTACTACGA+AGG | 0.677196 | 1_2:+51934115 | None:intergenic |
| AACTACATAGGCAACTACAG+TGG | 0.686317 | 1_2:+51935789 | None:intergenic |
| GTAGTATCCTCTATAAGACA+AGG | 0.691493 | 1_2:-51935711 | Msa0076120:CDS |
| GGCGGCGCGAACAACTCCGG+TGG | 0.695334 | 1_2:+51937201 | None:intergenic |
| TCTCATCTTAGCATTCAACA+AGG | 0.708282 | 1_2:-51935683 | Msa0076120:CDS |
| ATAGAATGTATGAAATAACA+GGG | 0.711420 | 1_2:+51934081 | None:intergenic |
| ACTCATCTGTCAAACATCAG+GGG | 0.713135 | 1_2:-51936523 | Msa0076120:CDS |
| GTGTTGATTAGGGCTTACGG+TGG | 0.717038 | 1_2:+51937172 | None:intergenic |
| GTCAGATTGAGATATTCACA+TGG | 0.740453 | 1_2:-51935858 | Msa0076120:CDS |
| CTCTCTCGGAGACAACACGC+CGG | 0.774524 | 1_2:-51937241 | Msa0076120:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCAAACAAAATTTATTT+AGG | - | chr1_2:51934094-51934113 | Msa0076120:three_prime_UTR | 10.0% |
| !! | ATAATATATATATATATTGC+TGG | - | chr1_2:51934817-51934836 | Msa0076120:intron | 10.0% |
| !!! | TGTTTAAGTTATTATTTTAT+AGG | - | chr1_2:51936080-51936099 | Msa0076120:intron | 10.0% |
| !!! | TACAAAAAAAAACGTTTTTA+GGG | + | chr1_2:51934187-51934206 | None:intergenic | 15.0% |
| !!! | ATACAAAAAAAAACGTTTTT+AGG | + | chr1_2:51934188-51934207 | None:intergenic | 15.0% |
| !! | ATAAATAAATCATGACATTT+GGG | - | chr1_2:51935720-51935739 | Msa0076120:CDS | 15.0% |
| !!! | ATTTTAACATTTCATTCAAT+TGG | - | chr1_2:51935954-51935973 | Msa0076120:intron | 15.0% |
| !! | ATAATAACTTAAACATGAAA+GGG | + | chr1_2:51936075-51936094 | None:intergenic | 15.0% |
| !! | AATAATAACTTAAACATGAA+AGG | + | chr1_2:51936076-51936095 | None:intergenic | 15.0% |
| !!! | TAATTTGAAATTGTGAATCA+TGG | - | chr1_2:51934227-51934246 | Msa0076120:CDS | 20.0% |
| !! | AATATAACTCATTTGTGTTA+AGG | - | chr1_2:51934530-51934549 | Msa0076120:intron | 20.0% |
| !! | ATATAACTCATTTGTGTTAA+GGG | - | chr1_2:51934531-51934550 | Msa0076120:intron | 20.0% |
| !!! | TATATATATATTGCTGGTTA+TGG | - | chr1_2:51934823-51934842 | Msa0076120:intron | 20.0% |
| !!! | GTTTTACTTATATATGCATT+CGG | - | chr1_2:51934867-51934886 | Msa0076120:intron | 20.0% |
| !! | GCATAAAAAAAAATTAAGCA+GGG | + | chr1_2:51934938-51934957 | None:intergenic | 20.0% |
| !!! | TGCTTAATTTTTTTTTATGC+CGG | - | chr1_2:51934938-51934957 | Msa0076120:intron | 20.0% |
| !! | CATGAAAACAAATAAATTGT+TGG | + | chr1_2:51935101-51935120 | None:intergenic | 20.0% |
| !!! | TATCATTTTTATAGCTTTCA+AGG | + | chr1_2:51935556-51935575 | None:intergenic | 20.0% |
| !!! | TCTAATTGATAGTTTTATCT+CGG | - | chr1_2:51935635-51935654 | Msa0076120:intron | 20.0% |
| !! | GTTCAAATTAAGTACTTAAA+AGG | + | chr1_2:51935689-51935708 | None:intergenic | 20.0% |
| !! | GATAAATAAATCATGACATT+TGG | - | chr1_2:51935719-51935738 | Msa0076120:CDS | 20.0% |
| !!! | AACTTTTAAGTTTAACAGAT+TGG | - | chr1_2:51936009-51936028 | Msa0076120:intron | 20.0% |
| !!! | ACTTTTAAGTTTAACAGATT+GGG | - | chr1_2:51936010-51936029 | Msa0076120:intron | 20.0% |
| !!! | AATTTGTTTTGTTTATCTAG+TGG | - | chr1_2:51936303-51936322 | Msa0076120:intron | 20.0% |
| !! | CAAAATCAAAAGTGAAATAA+TGG | + | chr1_2:51936572-51936591 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTGCATTTAGTT+AGG | - | chr1_2:51936581-51936600 | Msa0076120:intron | 20.0% |
| !! | ATAGAATGTATGAAATAACA+GGG | + | chr1_2:51937038-51937057 | None:intergenic | 20.0% |
| !! | TACTAGTATAAAAAACATCT+AGG | + | chr1_2:51937087-51937106 | None:intergenic | 20.0% |
| !!! | TAGATGTTTTTTATACTAGT+AGG | - | chr1_2:51937086-51937105 | Msa0076120:intron | 20.0% |
| !! | AAAACAGATACTAGATATAT+GGG | + | chr1_2:51937184-51937203 | None:intergenic | 20.0% |
| ! | GGAAAAAAACAAACAAAAAG+AGG | - | chr1_2:51934268-51934287 | Msa0076120:CDS | 25.0% |
| !! | ATATCAATGTTAGAAGCATA+TGG | + | chr1_2:51934656-51934675 | None:intergenic | 25.0% |
| ! | ATTATACTGTACATGAGTTT+AGG | + | chr1_2:51934802-51934821 | None:intergenic | 25.0% |
| ! | GGCATAAAAAAAAATTAAGC+AGG | + | chr1_2:51934939-51934958 | None:intergenic | 25.0% |
| !!! | GCTTAATTTTTTTTTATGCC+GGG | - | chr1_2:51934939-51934958 | Msa0076120:intron | 25.0% |
| ! | TATACCAATAGCTTAATTAG+AGG | + | chr1_2:51935007-51935026 | None:intergenic | 25.0% |
| !!! | AAGGTGTTTGATTAATCTTT+TGG | + | chr1_2:51935775-51935794 | None:intergenic | 25.0% |
| ! | AAGTCTAACTCTTAATTCAT+AGG | + | chr1_2:51935832-51935851 | None:intergenic | 25.0% |
| !!! | CTTTTAAGTTTAACAGATTG+GGG | - | chr1_2:51936011-51936030 | Msa0076120:intron | 25.0% |
| ! | AACAAAACAAATTCGACAAA+AGG | + | chr1_2:51936296-51936315 | None:intergenic | 25.0% |
| ! | GATAGAATGTATGAAATAAC+AGG | + | chr1_2:51937039-51937058 | None:intergenic | 25.0% |
| ! | CAAAACAGATACTAGATATA+TGG | + | chr1_2:51937185-51937204 | None:intergenic | 25.0% |
| !!! | ATCTAGTATCTGTTTTGTTT+AGG | - | chr1_2:51937188-51937207 | Msa0076120:five_prime_UTR | 25.0% |
| !!! | TCTAGTATCTGTTTTGTTTA+GGG | - | chr1_2:51937189-51937208 | Msa0076120:five_prime_UTR | 25.0% |
| GTAAAGTGAAAGTGAATAAG+CGG | + | chr1_2:51934073-51934092 | None:intergenic | 30.0% | |
| TGAAATTGTGAATCATGGAA+TGG | - | chr1_2:51934232-51934251 | Msa0076120:CDS | 30.0% | |
| !!! | TGGAATGGTTTTTGTTTTCA+AGG | - | chr1_2:51934247-51934266 | Msa0076120:CDS | 30.0% |
| ATGAAGAAATTGGACATTGA+AGG | - | chr1_2:51934305-51934324 | Msa0076120:CDS | 30.0% | |
| !!! | ACAGGTTTTCTTTTGAAGTT+AGG | + | chr1_2:51934347-51934366 | None:intergenic | 30.0% |
| ! | TATCATCATTGTTGTTGGAA+TGG | - | chr1_2:51934367-51934386 | Msa0076120:CDS | 30.0% |
| CAATGAGTTACACAAAATCA+CGG | - | chr1_2:51934441-51934460 | Msa0076120:CDS | 30.0% | |
| GAAACTATATTGTGCATGTT+TGG | + | chr1_2:51934478-51934497 | None:intergenic | 30.0% | |
| TTACTTATATATGCATTCGG+TGG | - | chr1_2:51934870-51934889 | Msa0076120:intron | 30.0% | |
| CTAGTATCAATGATATCAAG+AGG | + | chr1_2:51934905-51934924 | None:intergenic | 30.0% | |
| CATAAGATCAAACAAACTCA+AGG | + | chr1_2:51934972-51934991 | None:intergenic | 30.0% | |
| TTGTCCTCTAATTAAGCTAT+TGG | - | chr1_2:51935000-51935019 | Msa0076120:intron | 30.0% | |
| GGAACAAAAGTAAAACACAT+CGG | + | chr1_2:51935124-51935143 | None:intergenic | 30.0% | |
| TGCATATAAGTTCTGTAGAT+GGG | + | chr1_2:51935145-51935164 | None:intergenic | 30.0% | |
| TTGCATATAAGTTCTGTAGA+TGG | + | chr1_2:51935146-51935165 | None:intergenic | 30.0% | |
| ACAGAAATTACCTGAAATTG+AGG | + | chr1_2:51935188-51935207 | None:intergenic | 30.0% | |
| AACTATCAATTAGATCTCAC+AGG | + | chr1_2:51935629-51935648 | None:intergenic | 30.0% | |
| !!! | TTGATTAATCTTTTGGTGTC+AGG | + | chr1_2:51935768-51935787 | None:intergenic | 30.0% |
| TTATATGTGCAATTAGAGAG+AGG | + | chr1_2:51935904-51935923 | None:intergenic | 30.0% | |
| TTAAAAGATCTTATGCTTCG+TGG | - | chr1_2:51935931-51935950 | Msa0076120:intron | 30.0% | |
| GATTCAGCTCAAATATACAA+AGG | + | chr1_2:51936149-51936168 | None:intergenic | 30.0% | |
| AAACAAATTCGACAAAAGGA+AGG | + | chr1_2:51936292-51936311 | None:intergenic | 30.0% | |
| ! | TACAGTAATTTAAGATCAGC+TGG | - | chr1_2:51936422-51936441 | Msa0076120:CDS | 30.0% |
| !! | GATGATGATGATGTTGATTT+CGG | - | chr1_2:51936829-51936848 | Msa0076120:CDS | 30.0% |
| !! | ATGATGATGATGTTGATTTC+GGG | - | chr1_2:51936830-51936849 | Msa0076120:CDS | 30.0% |
| GTTCATAAAATCACATCAGA+AGG | + | chr1_2:51936917-51936936 | None:intergenic | 30.0% | |
| ! | GATGTGATTTTATGAACGTT+TGG | - | chr1_2:51936920-51936939 | Msa0076120:intron | 30.0% |
| GAAATAACAGGGCAATAAAT+CGG | + | chr1_2:51937027-51937046 | None:intergenic | 30.0% | |
| ! | ATTGTGAGATTTTCAAACTG+CGG | + | chr1_2:51937265-51937284 | None:intergenic | 30.0% |
| ATTTCTTCATAGACTCACTC+AGG | + | chr1_2:51934295-51934314 | None:intergenic | 35.0% | |
| GAGTGAGTCTATGAAGAAAT+TGG | - | chr1_2:51934295-51934314 | Msa0076120:CDS | 35.0% | |
| CCAACAACAATGATGATAAC+AGG | + | chr1_2:51934365-51934384 | None:intergenic | 35.0% | |
| CCTGTTATCATCATTGTTGT+TGG | - | chr1_2:51934362-51934381 | Msa0076120:CDS | 35.0% | |
| !! | ACGTAGTAGTTTTGCTGATT+TGG | - | chr1_2:51934507-51934526 | Msa0076120:intron | 35.0% |
| ATACTCATCTGTCAAACATC+AGG | - | chr1_2:51934591-51934610 | Msa0076120:intron | 35.0% | |
| TACTCATCTGTCAAACATCA+GGG | - | chr1_2:51934592-51934611 | Msa0076120:intron | 35.0% | |
| AAGTCAAAATTCCACCATTG+GGG | + | chr1_2:51934727-51934746 | None:intergenic | 35.0% | |
| GAAGTCAAAATTCCACCATT+GGG | + | chr1_2:51934728-51934747 | None:intergenic | 35.0% | |
| AGAAGTCAAAATTCCACCAT+TGG | + | chr1_2:51934729-51934748 | None:intergenic | 35.0% | |
| AAACTTAACCTCATCGAACT+TGG | + | chr1_2:51934768-51934787 | None:intergenic | 35.0% | |
| GTTTACATTGTCATTGTCAG+TGG | - | chr1_2:51935044-51935063 | Msa0076120:intron | 35.0% | |
| TGTTTATGCTCCTCAATTTC+AGG | - | chr1_2:51935175-51935194 | Msa0076120:intron | 35.0% | |
| TCAACTTGACTATGTTCTTG+TGG | - | chr1_2:51935226-51935245 | Msa0076120:intron | 35.0% | |
| GTCAGATTGAGATATTCACA+TGG | - | chr1_2:51935258-51935277 | Msa0076120:intron | 35.0% | |
| ATGTTGCTCATAAAAGTGGT+AGG | + | chr1_2:51935374-51935393 | None:intergenic | 35.0% | |
| AAGCATGTTGCTCATAAAAG+TGG | + | chr1_2:51935378-51935397 | None:intergenic | 35.0% | |
| GTAGTATCCTCTATAAGACA+AGG | - | chr1_2:51935405-51935424 | Msa0076120:intron | 35.0% | |
| TTGTTGAATGCTAAGATGAG+AGG | + | chr1_2:51935434-51935453 | None:intergenic | 35.0% | |
| TCTCATCTTAGCATTCAACA+AGG | - | chr1_2:51935433-51935452 | Msa0076120:intron | 35.0% | |
| CAAAATCAACAATACCTCCA+AGG | + | chr1_2:51935483-51935502 | None:intergenic | 35.0% | |
| !! | GTCTTTTAACTCACTACAAC+AGG | - | chr1_2:51935594-51935613 | Msa0076120:intron | 35.0% |
| !! | GAACTTGATAGCTGTTTTCA+AGG | + | chr1_2:51935794-51935813 | None:intergenic | 35.0% |
| GAAAACAGCTATCAAGTTCA+TGG | - | chr1_2:51935795-51935814 | Msa0076120:CDS | 35.0% | |
| TTTAACAGATTGGGGTGAAA+TGG | - | chr1_2:51936019-51936038 | Msa0076120:intron | 35.0% | |
| TTAACAGATTGGGGTGAAAT+GGG | - | chr1_2:51936020-51936039 | Msa0076120:intron | 35.0% | |
| ! | AACCATTTTCCTGTAGTTTC+AGG | - | chr1_2:51936108-51936127 | Msa0076120:intron | 35.0% |
| ! | ACCATTTTCCTGTAGTTTCA+GGG | - | chr1_2:51936109-51936128 | Msa0076120:intron | 35.0% |
| GCTCAAATATACAAAGGAAG+AGG | + | chr1_2:51936143-51936162 | None:intergenic | 35.0% | |
| TCTGTTCAACAGAATTGACT+GGG | + | chr1_2:51936224-51936243 | None:intergenic | 35.0% | |
| TTCTGTTCAACAGAATTGAC+TGG | + | chr1_2:51936225-51936244 | None:intergenic | 35.0% | |
| !! | CTAGTGGATGAAAGATTTTG+AGG | - | chr1_2:51936319-51936338 | Msa0076120:intron | 35.0% |
| CAAGAGCAGTTAATACTTGT+AGG | + | chr1_2:51936525-51936544 | None:intergenic | 35.0% | |
| ! | GTTAGGTTGTATGTCTTTGA+TGG | - | chr1_2:51936598-51936617 | Msa0076120:intron | 35.0% |
| AGGAGAACATGGATAAACTT+AGG | - | chr1_2:51936713-51936732 | Msa0076120:intron | 35.0% | |
| AGAACATGGATAAACTTAGG+AGG | - | chr1_2:51936716-51936735 | Msa0076120:intron | 35.0% | |
| GAACATGGATAAACTTAGGA+GGG | - | chr1_2:51936717-51936736 | Msa0076120:intron | 35.0% | |
| !! | CACTGGTTTGAAAAACAAAG+AGG | - | chr1_2:51936777-51936796 | Msa0076120:CDS | 35.0% |
| TGGTTTGAAAAACAAAGAGG+AGG | - | chr1_2:51936780-51936799 | Msa0076120:CDS | 35.0% | |
| TATGAACGTTTGGATTGCAT+CGG | - | chr1_2:51936930-51936949 | Msa0076120:intron | 35.0% | |
| TATAGGACCTTGACTTCATT+TGG | - | chr1_2:51936965-51936984 | Msa0076120:intron | 35.0% | |
| CTATCAGCATTATTCTCTCT+AGG | - | chr1_2:51937054-51937073 | Msa0076120:intron | 35.0% | |
| ACTAGTAGGAGTAATTGCAA+AGG | - | chr1_2:51937100-51937119 | Msa0076120:CDS | 35.0% | |
| ATTTGCACAAAAATCGAGCA+TGG | + | chr1_2:51937129-51937148 | None:intergenic | 35.0% | |
| ! | CTCGATTTTTGTGCAAATTG+AGG | - | chr1_2:51937131-51937150 | Msa0076120:CDS | 35.0% |
| !! | AGAAAGTACTTGAGAGTCAC+CGG | + | chr1_2:51934041-51934060 | None:intergenic | 40.0% |
| ! | ATCATTGTTGTTGGAATGGC+AGG | - | chr1_2:51934371-51934390 | Msa0076120:CDS | 40.0% |
| ACTCATTTGTGTTAAGGGAG+TGG | - | chr1_2:51934536-51934555 | Msa0076120:intron | 40.0% | |
| CTCATTTGTGTTAAGGGAGT+GGG | - | chr1_2:51934537-51934556 | Msa0076120:intron | 40.0% | |
| ACTCATCTGTCAAACATCAG+GGG | - | chr1_2:51934593-51934612 | Msa0076120:intron | 40.0% | |
| TTATGTGATGAATCTCGACC+CGG | - | chr1_2:51934616-51934635 | Msa0076120:CDS | 40.0% | |
| GTCATGAAGCAATTCAACCT+TGG | - | chr1_2:51934701-51934720 | Msa0076120:CDS | 40.0% | |
| TATGTTCTTGTGGATACTCC+TGG | - | chr1_2:51935236-51935255 | Msa0076120:intron | 40.0% | |
| GTGAATATCTCAATCTGACC+AGG | + | chr1_2:51935257-51935276 | None:intergenic | 40.0% | |
| ATATTCACATGGTCTGCTTC+TGG | - | chr1_2:51935269-51935288 | Msa0076120:intron | 40.0% | |
| ACTACATAGGCAACTACAGT+GGG | + | chr1_2:51935329-51935348 | None:intergenic | 40.0% | |
| AACTACATAGGCAACTACAG+TGG | + | chr1_2:51935330-51935349 | None:intergenic | 40.0% | |
| ACGAGGTGTATCAACTACAT+AGG | + | chr1_2:51935342-51935361 | None:intergenic | 40.0% | |
| GAGGTAACCTTGTCTTATAG+AGG | + | chr1_2:51935415-51935434 | None:intergenic | 40.0% | |
| GGTGAAATGGGAAGCAATAT+TGG | - | chr1_2:51936032-51936051 | Msa0076120:intron | 40.0% | |
| ACCCTGAAACTACAGGAAAA+TGG | + | chr1_2:51936113-51936132 | None:intergenic | 40.0% | |
| TCCTGTAGTTTCAGGGTTTA+TGG | - | chr1_2:51936116-51936135 | Msa0076120:intron | 40.0% | |
| CCTGTAGTTTCAGGGTTTAT+GGG | - | chr1_2:51936117-51936136 | Msa0076120:intron | 40.0% | |
| CAACAGAATTGACTGGGTAT+TGG | + | chr1_2:51936218-51936237 | None:intergenic | 40.0% | |
| TTTAACTCAGAGCCTTTCTC+TGG | - | chr1_2:51936385-51936404 | Msa0076120:CDS | 40.0% | |
| GTTTATCCATGTTCTCCTTC+CGG | + | chr1_2:51936711-51936730 | None:intergenic | 40.0% | |
| AGATGAGGATGCTATAGATG+AGG | - | chr1_2:51936864-51936883 | Msa0076120:intron | 40.0% | |
| GCATGTACCAAATGAAGTCA+AGG | + | chr1_2:51936975-51936994 | None:intergenic | 40.0% | |
| ! | AGATTTTCAAACTGCGGATG+TGG | + | chr1_2:51937259-51937278 | None:intergenic | 40.0% |
| !! | AGGGTGTTGATTAGGGCTTA+CGG | + | chr1_2:51933950-51933969 | None:intergenic | 45.0% |
| AAGTGAATAAGCGGCGAGTT+TGG | + | chr1_2:51934064-51934083 | None:intergenic | 45.0% | |
| GACATTGAAGGTTCCTCTTC+TGG | - | chr1_2:51934317-51934336 | Msa0076120:CDS | 45.0% | |
| GAAGTTAGGTGAACCAGAAG+AGG | + | chr1_2:51934333-51934352 | None:intergenic | 45.0% | |
| GGAAGACTACACTCATGCAT+AGG | - | chr1_2:51934558-51934577 | Msa0076120:intron | 45.0% | |
| GACTACACTCATGCATAGGT+TGG | - | chr1_2:51934562-51934581 | Msa0076120:intron | 45.0% | |
| !! | TATGGAAGTGTCATGACAGC+CGG | + | chr1_2:51934638-51934657 | None:intergenic | 45.0% |
| GTTTGCAACCAAGTTCGATG+AGG | - | chr1_2:51934757-51934776 | Msa0076120:CDS | 45.0% | |
| CAAACTCAAGGAAAGCTACC+CGG | + | chr1_2:51934960-51934979 | None:intergenic | 45.0% | |
| ! | CATTGTCAGTGGCTCGTTTT+AGG | - | chr1_2:51935055-51935074 | Msa0076120:intron | 45.0% |
| AACTACAGTGGGAAATGTGG+AGG | + | chr1_2:51935318-51935337 | None:intergenic | 45.0% | |
| AGCACAACATGAGTTTGCCT+TGG | - | chr1_2:51935463-51935482 | Msa0076120:intron | 45.0% | |
| ACAACATGAGTTTGCCTTGG+AGG | - | chr1_2:51935466-51935485 | Msa0076120:intron | 45.0% | |
| CCCATAAACCCTGAAACTAC+AGG | + | chr1_2:51936120-51936139 | None:intergenic | 45.0% | |
| ATTCATCCAGTGCCAGAGAA+AGG | + | chr1_2:51936400-51936419 | None:intergenic | 45.0% | |
| TTCCATGTATTCCTCTGCAC+TGG | + | chr1_2:51936501-51936520 | None:intergenic | 45.0% | |
| ACGTGAAGAGAAACAGCTGT+TGG | - | chr1_2:51936675-51936694 | Msa0076120:intron | 45.0% | |
| AGCTGTTGGAAGAAAATCGC+CGG | - | chr1_2:51936689-51936708 | Msa0076120:intron | 45.0% | |
| GGATAAACTTAGGAGGGAGA+TGG | - | chr1_2:51936723-51936742 | Msa0076120:intron | 45.0% | |
| ! | GAAACTGTAGTGTTGAGCAC+TGG | - | chr1_2:51936760-51936779 | Msa0076120:CDS | 45.0% |
| GAAAAACAAAGAGGAGGACG+AGG | - | chr1_2:51936786-51936805 | Msa0076120:CDS | 45.0% | |
| GGATGAAGAGGATGAGGAAA+TGG | - | chr1_2:51936807-51936826 | Msa0076120:CDS | 45.0% | |
| AGATGAGGACGAAGATGAAG+AGG | - | chr1_2:51936879-51936898 | Msa0076120:intron | 45.0% | |
| ATCGGAACTAGCGCTTGTAT+AGG | - | chr1_2:51936948-51936967 | Msa0076120:intron | 45.0% | |
| CAGAGTCATTCGTACTACGA+AGG | + | chr1_2:51937004-51937023 | None:intergenic | 45.0% | |
| GTCGTTCTCTTCTACACCAC+CGG | - | chr1_2:51933899-51933918 | Msa0076120:three_prime_UTR | 50.0% | |
| TAGGGCTTACGGTGGTGATA+AGG | + | chr1_2:51933939-51933958 | None:intergenic | 50.0% | |
| !! | GTGTTGATTAGGGCTTACGG+TGG | + | chr1_2:51933947-51933966 | None:intergenic | 50.0% |
| !! | GTTGCGGAGGGTGTTGATTA+GGG | + | chr1_2:51933957-51933976 | None:intergenic | 50.0% |
| !! | TGTTGCGGAGGGTGTTGATT+AGG | + | chr1_2:51933958-51933977 | None:intergenic | 50.0% |
| AATCAACACCCTCCGCAACA+TGG | - | chr1_2:51933958-51933977 | Msa0076120:three_prime_UTR | 50.0% | |
| CGTTATCTGCGTCCATGTTG+CGG | + | chr1_2:51933973-51933992 | None:intergenic | 50.0% | |
| !! | ATTTCCATGGGGGTGTCTTC+GGG | + | chr1_2:51934013-51934032 | None:intergenic | 50.0% |
| !! | CATTTCCATGGGGGTGTCTT+CGG | + | chr1_2:51934014-51934033 | None:intergenic | 50.0% |
| !! | TCACCGGCTTCCATTTCCAT+GGG | + | chr1_2:51934025-51934044 | None:intergenic | 50.0% |
| GAGTAACGCTGTGTCTATCG+TGG | + | chr1_2:51934151-51934170 | None:intergenic | 50.0% | |
| !! | ATGGAAGTGTCATGACAGCC+GGG | + | chr1_2:51934637-51934656 | None:intergenic | 50.0% |
| CAATTCAACCTTGGCCCCAA+TGG | - | chr1_2:51934710-51934729 | Msa0076120:CDS | 50.0% | |
| AAATTCCACCATTGGGGCCA+AGG | + | chr1_2:51934721-51934740 | None:intergenic | 50.0% | |
| GGCAACTACAGTGGGAAATG+TGG | + | chr1_2:51935321-51935340 | None:intergenic | 50.0% | |
| ! | GTGGTAGGATTTTCTGCACG+AGG | + | chr1_2:51935359-51935378 | None:intergenic | 50.0% |
| TTTGGGCTGTGTCTGTGATG+AGG | - | chr1_2:51935737-51935756 | Msa0076120:CDS | 50.0% | |
| GCTGTGTCTGTGATGAGGTT+TGG | - | chr1_2:51935742-51935761 | Msa0076120:CDS | 50.0% | |
| GATCTGAACTTGCAGCTGCT+TGG | + | chr1_2:51936349-51936368 | None:intergenic | 50.0% | |
| GCTGGAGTTTCTGCAGTTAC+TGG | - | chr1_2:51936440-51936459 | Msa0076120:CDS | 50.0% | |
| GTTTCTGCAGTTACTGGTGC+TGG | - | chr1_2:51936446-51936465 | Msa0076120:CDS | 50.0% | |
| ! | GTTACTGGTGCTGGAATCGA+AGG | - | chr1_2:51936455-51936474 | Msa0076120:CDS | 50.0% |
| AGCCAGTGCAGAGGAATACA+TGG | - | chr1_2:51936496-51936515 | Msa0076120:CDS | 50.0% | |
| GTTGGAAGAAAATCGCCGGA+AGG | - | chr1_2:51936693-51936712 | Msa0076120:intron | 50.0% | |
| AAATCGCCGGAAGGAGAACA+TGG | - | chr1_2:51936702-51936721 | Msa0076120:intron | 50.0% | |
| AGGAGGGAGATGGAGAAATC+TGG | - | chr1_2:51936733-51936752 | Msa0076120:intron | 50.0% | |
| AGGGAGATGGAGAAATCTGG+AGG | - | chr1_2:51936736-51936755 | Msa0076120:intron | 50.0% | |
| CGGGACATACACTGAAGATG+AGG | - | chr1_2:51936849-51936868 | Msa0076120:CDS | 50.0% | |
| GGTGTAGAAGAGAACGACGC+CGG | + | chr1_2:51933897-51933916 | None:intergenic | 55.0% | |
| GGCTTACGGTGGTGATAAGG+CGG | + | chr1_2:51933936-51933955 | None:intergenic | 55.0% | |
| ATCTGCGTCCATGTTGCGGA+GGG | + | chr1_2:51933969-51933988 | None:intergenic | 55.0% | |
| TATCTGCGTCCATGTTGCGG+AGG | + | chr1_2:51933970-51933989 | None:intergenic | 55.0% | |
| !! | TTTCCATGGGGGTGTCTTCG+GGG | + | chr1_2:51934012-51934031 | None:intergenic | 55.0% |
| CGAAGACACCCCCATGGAAA+TGG | - | chr1_2:51934012-51934031 | Msa0076120:three_prime_UTR | 55.0% | |
| ACCCCCATGGAAATGGAAGC+CGG | - | chr1_2:51934019-51934038 | Msa0076120:three_prime_UTR | 55.0% | |
| ! | ACCGGCTTCCATTTCCATGG+GGG | + | chr1_2:51934023-51934042 | None:intergenic | 55.0% |
| !! | CACCGGCTTCCATTTCCATG+GGG | + | chr1_2:51934024-51934043 | None:intergenic | 55.0% |
| !! | GTCACCGGCTTCCATTTCCA+TGG | + | chr1_2:51934026-51934045 | None:intergenic | 55.0% |
| GTTGGAATGGCAGGTCAGTC+AGG | - | chr1_2:51934380-51934399 | Msa0076120:CDS | 55.0% | |
| TTCAACCTTGGCCCCAATGG+TGG | - | chr1_2:51934713-51934732 | Msa0076120:CDS | 55.0% | |
| TCAGAGCCTTTCTCTGGCAC+TGG | - | chr1_2:51936391-51936410 | Msa0076120:CDS | 55.0% | |
| AGCTGTTGAAGCCAGTGCAG+AGG | - | chr1_2:51936487-51936506 | Msa0076120:CDS | 55.0% | |
| AGAGGAGGACGAGGATGAAG+AGG | - | chr1_2:51936795-51936814 | Msa0076120:CDS | 55.0% | |
| GGACGAGGATGAAGAGGATG+AGG | - | chr1_2:51936801-51936820 | Msa0076120:CDS | 55.0% | |
| CACACACACGCGAGCTCTCT+CGG | - | chr1_2:51933861-51933880 | Msa0076120:three_prime_UTR | 60.0% | |
| CTCTCTCGGAGACAACACGC+CGG | - | chr1_2:51933875-51933894 | Msa0076120:three_prime_UTR | 60.0% | |
| TAAGGCGGCGCGAACAACTC+CGG | + | chr1_2:51933921-51933940 | None:intergenic | 60.0% | |
| TAACCCCGAAGACACCCCCA+TGG | - | chr1_2:51934006-51934025 | Msa0076120:three_prime_UTR | 60.0% | |
| GGCGGCGCGAACAACTCCGG+TGG | + | chr1_2:51933918-51933937 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 51933835 | 51937303 | 51933835 | ID=Msa0076120;Name=Msa0076120 |
| chr1_2 | mRNA | 51933835 | 51937303 | 51933835 | ID=Msa0076120-mRNA-1;Parent=Msa0076120;Name=Msa0076120-mRNA-1;_AED=0.09;_eAED=0.09;_QI=142|1|1|1|1|1|6|382|395 |
| chr1_2 | exon | 51933835 | 51934481 | 51933835 | ID=Msa0076120-mRNA-1:exon:16019;Parent=Msa0076120-mRNA-1 |
| chr1_2 | exon | 51934610 | 51934815 | 51934610 | ID=Msa0076120-mRNA-1:exon:16018;Parent=Msa0076120-mRNA-1 |
| chr1_2 | exon | 51935651 | 51935941 | 51935651 | ID=Msa0076120-mRNA-1:exon:16017;Parent=Msa0076120-mRNA-1 |
| chr1_2 | exon | 51936360 | 51936586 | 51936360 | ID=Msa0076120-mRNA-1:exon:16016;Parent=Msa0076120-mRNA-1 |
| chr1_2 | exon | 51936746 | 51936869 | 51936746 | ID=Msa0076120-mRNA-1:exon:16015;Parent=Msa0076120-mRNA-1 |
| chr1_2 | exon | 51937087 | 51937303 | 51937087 | ID=Msa0076120-mRNA-1:exon:16014;Parent=Msa0076120-mRNA-1 |
| chr1_2 | five_prime_UTR | 51937162 | 51937303 | 51937162 | ID=Msa0076120-mRNA-1:five_prime_utr;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51937087 | 51937161 | 51937087 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51936746 | 51936869 | 51936746 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51936360 | 51936586 | 51936360 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51935651 | 51935941 | 51935651 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51934610 | 51934815 | 51934610 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | CDS | 51934217 | 51934481 | 51934217 | ID=Msa0076120-mRNA-1:cds;Parent=Msa0076120-mRNA-1 |
| chr1_2 | three_prime_UTR | 51933835 | 51934216 | 51933835 | ID=Msa0076120-mRNA-1:three_prime_utr;Parent=Msa0076120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
