Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219860 | XP_003597053.1 | 91.711 | 567 | 47 | 0 | 3 | 569 | 1 | 567 | 0.0 | 1092 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219860 | sp|B9RHP7|TPS11_RICCO | 59.420 | 552 | 209 | 7 | 21 | 568 | 22 | 562 | 0.0 | 660 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219860 | A0RZI3 | 91.711 | 567 | 47 | 0 | 3 | 569 | 1 | 567 | 0.0 | 1092 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0092220 | Msa0219860 | 0.804447 | 2.150579e-49 | -8.615850e-47 |
Msa0219860 | Msa0242720 | 0.802386 | 5.749832e-49 | -8.615850e-47 |
Msa0219860 | Msa0261130 | 0.903728 | 2.570244e-79 | -8.615850e-47 |
Msa0219860 | Msa0299340 | 0.912596 | 1.625851e-83 | -8.615850e-47 |
Msa0219860 | Msa0336680 | 0.919668 | 3.376945e-87 | -8.615850e-47 |
Msa0219860 | Msa0386890 | 0.805199 | 1.497681e-49 | -8.615850e-47 |
Msa0219860 | Msa0715040 | 0.808349 | 3.235747e-50 | -8.615850e-47 |
Msa0219860 | Msa1361040 | 0.804937 | 1.699430e-49 | -8.615850e-47 |
Msa0219860 | Msa1368400 | 0.804241 | 2.374649e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219860 | MtrunA17_Chr2g0323131 | 91.711 | 567 | 47 | 0 | 3 | 569 | 1 | 567 | 0.0 | 1092 |
Msa0219860 | MtrunA17_Chr2g0323151 | 84.232 | 482 | 75 | 1 | 87 | 568 | 1 | 481 | 0.0 | 870 |
Msa0219860 | MtrunA17_Chr4g0023911 | 40.592 | 473 | 268 | 6 | 84 | 546 | 89 | 558 | 1.76e-115 | 355 |
Msa0219860 | MtrunA17_Chr2g0310331 | 35.765 | 562 | 349 | 6 | 15 | 566 | 26 | 585 | 3.16e-107 | 333 |
Msa0219860 | MtrunA17_Chr4g0042111 | 36.382 | 503 | 303 | 7 | 57 | 546 | 41 | 539 | 1.06e-106 | 331 |
Msa0219860 | MtrunA17_Chr4g0048911 | 33.571 | 560 | 342 | 12 | 21 | 561 | 6 | 554 | 1.06e-103 | 324 |
Msa0219860 | MtrunA17_Chr4g0048921 | 36.140 | 487 | 300 | 6 | 85 | 562 | 82 | 566 | 5.70e-102 | 319 |
Msa0219860 | MtrunA17_Chr6g0451711 | 35.200 | 500 | 302 | 8 | 83 | 567 | 65 | 557 | 6.04e-98 | 308 |
Msa0219860 | MtrunA17_Chr2g0280581 | 33.597 | 506 | 323 | 4 | 69 | 561 | 12 | 517 | 3.44e-97 | 305 |
Msa0219860 | MtrunA17_Chr8g0357411 | 34.962 | 532 | 327 | 8 | 50 | 567 | 63 | 589 | 8.25e-97 | 306 |
Msa0219860 | MtrunA17_Chr2g0310401 | 39.443 | 431 | 251 | 5 | 142 | 566 | 5 | 431 | 2.54e-96 | 300 |
Msa0219860 | MtrunA17_Chr6g0465441 | 33.468 | 496 | 316 | 7 | 83 | 567 | 61 | 553 | 3.39e-96 | 304 |
Msa0219860 | MtrunA17_Chr3g0099031 | 33.733 | 501 | 318 | 6 | 74 | 561 | 13 | 512 | 5.75e-96 | 302 |
Msa0219860 | MtrunA17_Chr4g0024691 | 34.211 | 532 | 323 | 11 | 50 | 567 | 43 | 561 | 1.87e-95 | 302 |
Msa0219860 | MtrunA17_Chr3g0109001 | 33.992 | 506 | 315 | 5 | 72 | 561 | 11 | 513 | 3.24e-95 | 300 |
Msa0219860 | MtrunA17_Chr3g0108941 | 34.442 | 511 | 314 | 7 | 72 | 565 | 11 | 517 | 1.44e-94 | 298 |
Msa0219860 | MtrunA17_Chr6g0477111 | 35.597 | 486 | 293 | 7 | 92 | 561 | 6 | 487 | 2.61e-94 | 297 |
Msa0219860 | MtrunA17_Chr7g0236961 | 34.599 | 474 | 292 | 6 | 86 | 547 | 9 | 476 | 4.16e-94 | 296 |
Msa0219860 | MtrunA17_Chr7g0237011 | 34.599 | 474 | 292 | 6 | 86 | 547 | 9 | 476 | 6.73e-94 | 296 |
Msa0219860 | MtrunA17_Chr7g0236991 | 34.599 | 474 | 292 | 6 | 86 | 547 | 64 | 531 | 1.81e-93 | 296 |
Msa0219860 | MtrunA17_Chr7g0237001 | 34.599 | 474 | 292 | 6 | 86 | 547 | 64 | 531 | 2.80e-93 | 296 |
Msa0219860 | MtrunA17_Chr7g0237041 | 34.599 | 474 | 292 | 6 | 86 | 547 | 64 | 531 | 2.80e-93 | 296 |
Msa0219860 | MtrunA17_Chr7g0237081 | 34.599 | 474 | 292 | 6 | 86 | 547 | 64 | 531 | 2.80e-93 | 296 |
Msa0219860 | MtrunA17_Chr7g0237051 | 34.599 | 474 | 292 | 6 | 86 | 547 | 64 | 531 | 2.80e-93 | 296 |
Msa0219860 | MtrunA17_Chr5g0425371 | 34.766 | 512 | 311 | 9 | 72 | 567 | 49 | 553 | 9.12e-93 | 295 |
Msa0219860 | MtrunA17_Chr3g0108991 | 33.333 | 507 | 324 | 6 | 72 | 565 | 11 | 516 | 4.48e-92 | 292 |
Msa0219860 | MtrunA17_Chr3g0108951 | 33.333 | 507 | 324 | 6 | 72 | 565 | 11 | 516 | 4.48e-92 | 292 |
Msa0219860 | MtrunA17_Chr3g0105071 | 35.208 | 480 | 288 | 7 | 83 | 547 | 64 | 535 | 2.03e-91 | 291 |
Msa0219860 | MtrunA17_Chr3g0108981 | 33.605 | 491 | 307 | 5 | 87 | 561 | 1 | 488 | 5.40e-91 | 288 |
Msa0219860 | MtrunA17_Chr3g0108961 | 33.605 | 491 | 307 | 5 | 87 | 561 | 1 | 488 | 5.40e-91 | 288 |
Msa0219860 | MtrunA17_Chr3g0109031 | 31.621 | 506 | 334 | 4 | 72 | 565 | 11 | 516 | 8.28e-91 | 289 |
Msa0219860 | MtrunA17_Chr3g0108971 | 33.943 | 492 | 311 | 6 | 87 | 565 | 1 | 491 | 8.48e-91 | 288 |
Msa0219860 | MtrunA17_Chr3g0109021 | 32.406 | 503 | 326 | 6 | 72 | 561 | 11 | 512 | 2.61e-90 | 287 |
Msa0219860 | MtrunA17_Chr3g0082691 | 33.400 | 503 | 310 | 8 | 82 | 567 | 59 | 553 | 4.06e-90 | 288 |
Msa0219860 | MtrunA17_Chr2g0319051 | 33.922 | 510 | 318 | 9 | 73 | 567 | 9 | 514 | 5.95e-90 | 286 |
Msa0219860 | MtrunA17_Chr6g0465851 | 33.133 | 498 | 315 | 6 | 83 | 567 | 26 | 518 | 2.55e-89 | 285 |
Msa0219860 | MtrunA17_Chr2g0319041 | 32.765 | 528 | 331 | 11 | 59 | 567 | 35 | 557 | 2.65e-89 | 286 |
Msa0219860 | MtrunA17_Chr3g0105691 | 33.399 | 506 | 323 | 7 | 72 | 564 | 44 | 548 | 3.95e-89 | 285 |
Msa0219860 | MtrunA17_Chr3g0109011 | 33.265 | 490 | 309 | 5 | 87 | 561 | 1 | 487 | 5.28e-89 | 283 |
Msa0219860 | MtrunA17_Chr6g0466051 | 33.133 | 498 | 315 | 6 | 83 | 567 | 61 | 553 | 8.44e-89 | 285 |
Msa0219860 | MtrunA17_Chr6g0465911 | 33.133 | 498 | 315 | 6 | 83 | 567 | 61 | 553 | 8.90e-89 | 284 |
Msa0219860 | MtrunA17_Chr5g0431651 | 33.399 | 506 | 306 | 9 | 82 | 567 | 58 | 552 | 1.75e-86 | 278 |
Msa0219860 | MtrunA17_Chr6g0477121 | 36.386 | 415 | 252 | 6 | 143 | 549 | 8 | 418 | 2.51e-83 | 266 |
Msa0219860 | MtrunA17_Chr8g0336181 | 32.941 | 510 | 310 | 11 | 62 | 550 | 39 | 537 | 4.74e-83 | 270 |
Msa0219860 | MtrunA17_Chr5g0431571 | 35.124 | 484 | 285 | 11 | 82 | 547 | 55 | 527 | 5.37e-83 | 269 |
Msa0219860 | MtrunA17_Chr7g0236951 | 39.871 | 311 | 174 | 2 | 86 | 386 | 9 | 316 | 2.33e-74 | 239 |
Msa0219860 | MtrunA17_Chr7g0237031 | 39.871 | 311 | 174 | 2 | 86 | 386 | 9 | 316 | 4.32e-74 | 239 |
Msa0219860 | MtrunA17_Chr7g0236971 | 33.333 | 384 | 251 | 4 | 168 | 549 | 1 | 381 | 3.77e-72 | 236 |
Msa0219860 | MtrunA17_Chr6g0466111 | 40.190 | 316 | 176 | 2 | 82 | 387 | 25 | 337 | 1.13e-71 | 233 |
Msa0219860 | MtrunA17_Chr6g0465981 | 40.317 | 315 | 175 | 2 | 83 | 387 | 61 | 372 | 2.05e-71 | 233 |
Msa0219860 | MtrunA17_Chr6g0465871 | 40.317 | 315 | 175 | 2 | 83 | 387 | 61 | 372 | 2.05e-71 | 233 |
Msa0219860 | MtrunA17_Chr6g0466081 | 40.317 | 315 | 175 | 2 | 83 | 387 | 61 | 372 | 2.05e-71 | 233 |
Msa0219860 | MtrunA17_Chr6g0465931 | 39.873 | 316 | 177 | 2 | 82 | 387 | 25 | 337 | 2.66e-70 | 229 |
Msa0219860 | MtrunA17_Chr4g0008621 | 35.393 | 356 | 218 | 4 | 84 | 428 | 70 | 424 | 6.20e-65 | 218 |
Msa0219860 | MtrunA17_Chr7g0217361 | 39.427 | 279 | 165 | 4 | 270 | 546 | 11 | 287 | 5.64e-61 | 204 |
Msa0219860 | MtrunA17_Chr5g0445511 | 39.916 | 238 | 143 | 0 | 164 | 401 | 2 | 239 | 2.24e-51 | 176 |
Msa0219860 | MtrunA17_Chr8g0357231 | 32.692 | 260 | 170 | 4 | 310 | 566 | 1 | 258 | 2.20e-47 | 166 |
Msa0219860 | MtrunA17_Chr2g0319071 | 28.252 | 492 | 291 | 12 | 90 | 568 | 46 | 488 | 8.28e-47 | 171 |
Msa0219860 | MtrunA17_Chr2g0310121 | 27.126 | 494 | 324 | 13 | 85 | 546 | 271 | 760 | 1.01e-39 | 154 |
Msa0219860 | MtrunA17_Chr2g0319081 | 30.921 | 304 | 188 | 9 | 270 | 567 | 140 | 427 | 7.12e-37 | 142 |
Msa0219860 | MtrunA17_Chr3g0101681 | 25.591 | 508 | 339 | 13 | 85 | 560 | 272 | 772 | 7.45e-36 | 143 |
Msa0219860 | MtrunA17_Chr7g0237071 | 37.624 | 202 | 110 | 3 | 86 | 274 | 9 | 207 | 3.16e-34 | 129 |
Msa0219860 | MtrunA17_Chr6g0466031 | 26.437 | 261 | 187 | 4 | 310 | 567 | 2 | 260 | 1.20e-29 | 117 |
Msa0219860 | MtrunA17_Chr7g0237061 | 28.216 | 241 | 147 | 6 | 310 | 549 | 2 | 217 | 6.41e-28 | 112 |
Msa0219860 | MtrunA17_Chr8g0357221 | 32.836 | 268 | 160 | 6 | 13 | 264 | 22 | 285 | 2.73e-27 | 111 |
Msa0219860 | MtrunA17_Chr2g0281651 | 26.415 | 318 | 220 | 7 | 245 | 555 | 43 | 353 | 4.30e-27 | 114 |
Msa0219860 | MtrunA17_Chr6g0466021 | 39.860 | 143 | 73 | 2 | 83 | 215 | 61 | 200 | 1.59e-22 | 95.9 |
Msa0219860 | MtrunA17_Chr7g0233861 | 39.024 | 123 | 66 | 1 | 220 | 342 | 45 | 158 | 1.69e-20 | 89.4 |
Msa0219860 | MtrunA17_Chr7g0217351 | 30.769 | 221 | 140 | 5 | 60 | 270 | 56 | 273 | 6.84e-19 | 87.4 |
Msa0219860 | MtrunA17_Chr7g0259881 | 28.814 | 295 | 166 | 11 | 85 | 340 | 225 | 514 | 3.34e-18 | 88.6 |
Msa0219860 | MtrunA17_Chr2g0281721 | 35.000 | 100 | 63 | 2 | 245 | 343 | 29 | 127 | 1.32e-12 | 65.5 |
Msa0219860 | MtrunA17_Chr5g0445501 | 27.072 | 181 | 113 | 7 | 397 | 567 | 1 | 172 | 5.00e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0219860 | AT4G16730.1 | 39.922 | 511 | 284 | 7 | 77 | 567 | 32 | 539 | 1.32e-127 | 385 |
Msa0219860 | AT4G16730.2 | 40.323 | 496 | 273 | 7 | 92 | 567 | 1 | 493 | 7.13e-127 | 381 |
Msa0219860 | AT4G16740.1 | 36.502 | 526 | 303 | 8 | 63 | 568 | 51 | 565 | 8.58e-109 | 337 |
Msa0219860 | AT2G24210.1 | 35.685 | 496 | 297 | 9 | 90 | 567 | 99 | 590 | 3.85e-104 | 326 |
Msa0219860 | AT3G25820.1 | 34.733 | 524 | 308 | 11 | 65 | 567 | 84 | 594 | 1.25e-100 | 317 |
Msa0219860 | AT3G25830.1 | 34.733 | 524 | 308 | 11 | 65 | 567 | 84 | 594 | 1.25e-100 | 317 |
Msa0219860 | AT1G61680.1 | 35.318 | 487 | 305 | 5 | 82 | 561 | 86 | 569 | 4.81e-100 | 315 |
Msa0219860 | AT3G25810.1 | 34.462 | 502 | 300 | 9 | 90 | 567 | 101 | 597 | 4.69e-98 | 310 |
Msa0219860 | AT1G61680.2 | 34.702 | 487 | 301 | 6 | 82 | 561 | 86 | 562 | 6.82e-95 | 301 |
Msa0219860 | AT5G23960.2 | 30.134 | 521 | 351 | 7 | 58 | 567 | 27 | 545 | 9.39e-83 | 269 |
Msa0219860 | AT5G23960.1 | 30.210 | 523 | 350 | 8 | 58 | 567 | 27 | 547 | 8.79e-82 | 266 |
Msa0219860 | AT1G70080.1 | 31.463 | 499 | 316 | 10 | 82 | 560 | 112 | 604 | 2.29e-75 | 251 |
Msa0219860 | AT4G16740.2 | 37.609 | 343 | 191 | 5 | 63 | 388 | 51 | 387 | 5.70e-70 | 231 |
Msa0219860 | AT3G25820.2 | 35.775 | 355 | 204 | 7 | 65 | 406 | 84 | 427 | 4.10e-67 | 224 |
Msa0219860 | AT3G14490.1 | 29.796 | 490 | 325 | 9 | 90 | 567 | 114 | 596 | 6.05e-65 | 223 |
Msa0219860 | AT3G29410.2 | 30.043 | 466 | 314 | 6 | 90 | 546 | 13 | 475 | 2.64e-64 | 219 |
Msa0219860 | AT1G33750.1 | 28.571 | 525 | 356 | 9 | 54 | 567 | 87 | 603 | 7.45e-64 | 220 |
Msa0219860 | AT3G29410.1 | 30.043 | 466 | 314 | 6 | 90 | 546 | 118 | 580 | 1.94e-63 | 219 |
Msa0219860 | AT3G14540.1 | 29.435 | 496 | 327 | 9 | 90 | 568 | 113 | 602 | 3.02e-62 | 216 |
Msa0219860 | AT1G31950.3 | 27.768 | 569 | 377 | 11 | 13 | 568 | 61 | 608 | 9.81e-62 | 214 |
Msa0219860 | AT1G31950.1 | 28.652 | 534 | 359 | 11 | 50 | 568 | 81 | 607 | 1.45e-61 | 214 |
Msa0219860 | AT3G14520.1 | 27.789 | 493 | 339 | 8 | 90 | 568 | 116 | 605 | 1.82e-58 | 206 |
Msa0219860 | AT4G15870.1 | 29.132 | 484 | 315 | 11 | 78 | 547 | 107 | 576 | 2.16e-58 | 205 |
Msa0219860 | AT5G44630.1 | 30.181 | 497 | 316 | 13 | 72 | 546 | 47 | 534 | 3.02e-54 | 193 |
Msa0219860 | AT3G29110.1 | 29.150 | 494 | 313 | 11 | 77 | 546 | 94 | 574 | 1.54e-53 | 192 |
Msa0219860 | AT4G13300.1 | 28.838 | 482 | 329 | 8 | 92 | 561 | 69 | 548 | 3.73e-53 | 190 |
Msa0219860 | AT3G32030.1 | 25.889 | 506 | 356 | 7 | 77 | 567 | 103 | 604 | 4.23e-53 | 191 |
Msa0219860 | AT4G16740.4 | 35.535 | 318 | 182 | 5 | 63 | 363 | 51 | 362 | 1.79e-52 | 184 |
Msa0219860 | AT4G16740.3 | 35.535 | 318 | 182 | 5 | 63 | 363 | 51 | 362 | 1.79e-52 | 184 |
Msa0219860 | AT1G31950.2 | 28.846 | 468 | 302 | 9 | 13 | 470 | 61 | 507 | 1.95e-51 | 185 |
Msa0219860 | AT4G20230.1 | 27.766 | 461 | 321 | 7 | 92 | 542 | 119 | 577 | 2.51e-51 | 186 |
Msa0219860 | AT4G20230.2 | 27.766 | 461 | 321 | 7 | 92 | 542 | 131 | 589 | 2.61e-51 | 186 |
Msa0219860 | AT3G14540.2 | 30.633 | 395 | 254 | 7 | 90 | 470 | 113 | 501 | 3.67e-51 | 184 |
Msa0219860 | AT2G23230.2 | 29.602 | 527 | 324 | 15 | 66 | 561 | 84 | 594 | 4.14e-51 | 186 |
Msa0219860 | AT2G23230.1 | 29.693 | 522 | 325 | 15 | 66 | 561 | 84 | 589 | 8.48e-51 | 184 |
Msa0219860 | AT4G13280.2 | 28.475 | 446 | 310 | 6 | 123 | 561 | 105 | 548 | 1.45e-50 | 183 |
Msa0219860 | AT4G20210.1 | 27.619 | 525 | 345 | 12 | 67 | 567 | 87 | 600 | 1.81e-50 | 184 |
Msa0219860 | AT3G29190.1 | 29.227 | 414 | 283 | 6 | 92 | 496 | 116 | 528 | 1.19e-49 | 181 |
Msa0219860 | AT4G20200.1 | 28.846 | 468 | 307 | 8 | 92 | 542 | 119 | 577 | 1.26e-49 | 181 |
Msa0219860 | AT1G66020.1 | 29.032 | 465 | 310 | 9 | 92 | 542 | 113 | 571 | 2.86e-49 | 180 |
Msa0219860 | AT5G48110.1 | 29.063 | 320 | 222 | 4 | 228 | 546 | 2 | 317 | 3.62e-49 | 174 |
Msa0219860 | AT3G25820.4 | 35.739 | 291 | 163 | 7 | 65 | 342 | 84 | 363 | 9.14e-49 | 174 |
Msa0219860 | AT3G25820.3 | 35.739 | 291 | 163 | 7 | 65 | 342 | 84 | 363 | 9.14e-49 | 174 |
Msa0219860 | AT1G48800.1 | 29.436 | 479 | 312 | 13 | 90 | 552 | 118 | 586 | 3.35e-48 | 177 |
Msa0219860 | AT1G66020.2 | 35.714 | 280 | 163 | 6 | 92 | 358 | 113 | 388 | 7.37e-43 | 159 |
Msa0219860 | AT4G13280.1 | 27.130 | 446 | 286 | 8 | 123 | 561 | 105 | 518 | 3.78e-41 | 156 |
Msa0219860 | AT1G48820.1 | 26.380 | 489 | 314 | 12 | 67 | 547 | 92 | 542 | 3.94e-41 | 157 |
Msa0219860 | AT1G79460.1 | 25.769 | 520 | 339 | 16 | 85 | 568 | 270 | 778 | 2.40e-33 | 135 |
Msa0219860 | AT1G61120.1 | 25.532 | 423 | 277 | 7 | 84 | 478 | 280 | 692 | 7.99e-28 | 119 |
Msa0219860 | AT4G02780.1 | 28.679 | 265 | 144 | 9 | 92 | 317 | 334 | 592 | 5.70e-17 | 85.1 |
Find 121 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTTAGTCCATGTTCTTTC+TGG | 0.088351 | 2_1:-67773427 | None:intergenic |
TCCAAATATGTCTTAAAATT+TGG | 0.090930 | 2_1:-67773627 | None:intergenic |
ACACTTGCTCGTTGTAATTT+TGG | 0.108263 | 2_1:+67768577 | Msa0219860:CDS |
TTATATGAGGCATCATATTT+AGG | 0.175329 | 2_1:+67772220 | Msa0219860:CDS |
ATTCCAAAAGAGTTGGTATT+TGG | 0.197928 | 2_1:-67772429 | None:intergenic |
TAACCAAATACCAACTCTTT+TGG | 0.217213 | 2_1:+67772426 | Msa0219860:CDS |
CCGGGGAAATTCTTCGACTA+TGG | 0.229539 | 2_1:+67773775 | Msa0219860:CDS |
GATGATATCTTTGACACTTA+TGG | 0.245899 | 2_1:+67773174 | Msa0219860:CDS |
TTTAAGACATATTTGGATAA+TGG | 0.251513 | 2_1:+67773633 | Msa0219860:CDS |
ATATTTCTGCTAATTCTCTT+TGG | 0.276229 | 2_1:-67772489 | None:intergenic |
TATATGAGGCATCATATTTA+GGG | 0.283045 | 2_1:+67772221 | Msa0219860:CDS |
TGAAGATAAGACCAAAAGTT+TGG | 0.285905 | 2_1:+67771003 | Msa0219860:CDS |
GCCATTGTCATTGTATTTGC+AGG | 0.288475 | 2_1:-67768520 | None:intergenic |
TCTGACTTGACCCAAACTTT+TGG | 0.295418 | 2_1:-67771014 | None:intergenic |
CATTTCTTGAAGAAGCTAAA+TGG | 0.310663 | 2_1:+67773586 | Msa0219860:CDS |
TCTTCAACTCAATTGCTAAT+AGG | 0.323468 | 2_1:-67774232 | None:intergenic |
CAATTTGAATGACATGGTTC+TGG | 0.331181 | 2_1:-67773108 | None:intergenic |
ATCACTTACCAAAGACGTTT+GGG | 0.334548 | 2_1:+67772186 | Msa0219860:CDS |
TTGCCACATCCCTTCAATTT+CGG | 0.335451 | 2_1:+67771194 | Msa0219860:CDS |
ATACATGAAAATATGTTATA+TGG | 0.345162 | 2_1:+67773367 | Msa0219860:CDS |
CTTGCCATTCTTAAGTGCTT+TGG | 0.347742 | 2_1:-67772361 | None:intergenic |
AATGGCTGGCCCACATGTTC+TGG | 0.348047 | 2_1:+67771229 | Msa0219860:CDS |
ATGAAGGAAGAATACAAATA+AGG | 0.356949 | 2_1:+67774026 | Msa0219860:CDS |
CAACATACCCCAAACGTCTT+TGG | 0.360118 | 2_1:-67772194 | None:intergenic |
GACCAACAGAGTGCTTCTTA+TGG | 0.370215 | 2_1:+67773070 | Msa0219860:CDS |
CCCAGGCTCTTCACTTGCTC+CGG | 0.372004 | 2_1:+67773756 | Msa0219860:CDS |
GCTGGGGATTGGTCACCATT+TGG | 0.377069 | 2_1:+67771111 | Msa0219860:CDS |
TCTCTACAAAATTCAAAATC+AGG | 0.385153 | 2_1:+67768628 | Msa0219860:CDS |
GAAGCTAAATGGTTCAATAA+TGG | 0.388219 | 2_1:+67773597 | Msa0219860:CDS |
TTTAGGTGGTGGAAAGAGTT+GGG | 0.392717 | 2_1:+67773015 | Msa0219860:intron |
TTGAATTTAGCAATGCTTCT+CGG | 0.408026 | 2_1:-67771045 | None:intergenic |
AATCACTTACCAAAGACGTT+TGG | 0.411862 | 2_1:+67772185 | Msa0219860:CDS |
TTTCGGTTACTGAGGCATAA+TGG | 0.414627 | 2_1:+67771211 | Msa0219860:CDS |
AACTTGGGAGGATATGTGAT+TGG | 0.414855 | 2_1:+67771152 | Msa0219860:CDS |
ATTCTCTTTGGTGTAATGAC+TGG | 0.418010 | 2_1:-67772477 | None:intergenic |
ATACAAATAAGGATGCTACT+AGG | 0.418565 | 2_1:+67774037 | Msa0219860:CDS |
TCTATATGCAATTTCATTTG+TGG | 0.420807 | 2_1:-67773402 | None:intergenic |
GGGTATGTTGAGTTTATATG+AGG | 0.434234 | 2_1:+67772207 | Msa0219860:CDS |
ATCATCTTCAATGTTGCAAT+AGG | 0.441194 | 2_1:-67771073 | None:intergenic |
GGATGCTACTAGGGAATTTG+TGG | 0.444878 | 2_1:+67774047 | Msa0219860:CDS |
GAAGATAAGACCAAAAGTTT+GGG | 0.446624 | 2_1:+67771004 | Msa0219860:CDS |
ATGCATGCCACCTTCCTCAT+TGG | 0.449603 | 2_1:+67773687 | Msa0219860:CDS |
TCAATCCAAGGGCTGGGGAT+TGG | 0.453647 | 2_1:+67771100 | Msa0219860:CDS |
CCAACGTGCCTACCTACTTC+AGG | 0.456001 | 2_1:-67772322 | None:intergenic |
CATAACTAGCAAAATACATA+TGG | 0.467636 | 2_1:-67773151 | None:intergenic |
CCAGGCTCTTCACTTGCTCC+GGG | 0.468250 | 2_1:+67773757 | Msa0219860:CDS |
GATAATGGAGTGATTTCTGC+AGG | 0.473286 | 2_1:+67773648 | Msa0219860:CDS |
ATTGACTCAATCCAAGGGCT+GGG | 0.473312 | 2_1:+67771094 | Msa0219860:CDS |
TTGGGACTTGTTGACAAACT+TGG | 0.473750 | 2_1:+67773033 | Msa0219860:CDS |
GATTGACTCAATCCAAGGGC+TGG | 0.474173 | 2_1:+67771093 | Msa0219860:CDS |
TGCATGGTAAATTATCGATC+AGG | 0.475222 | 2_1:+67768656 | Msa0219860:CDS |
TAAGTGCTTTGGAAGTGTTA+AGG | 0.482402 | 2_1:-67772350 | None:intergenic |
GTTTAGGTGGTGGAAAGAGT+TGG | 0.483866 | 2_1:+67773014 | Msa0219860:intron |
TACAAATAAGGATGCTACTA+GGG | 0.488175 | 2_1:+67774038 | Msa0219860:CDS |
CTTCGACTATGGGATGACTT+AGG | 0.488396 | 2_1:+67773786 | Msa0219860:CDS |
CGGGGAAATTCTTCGACTAT+GGG | 0.489879 | 2_1:+67773776 | Msa0219860:CDS |
CATTGATCTCATCTTCCAAA+TGG | 0.495809 | 2_1:-67771126 | None:intergenic |
GAGAATTAGCAGAAATATGC+AGG | 0.496451 | 2_1:+67772494 | Msa0219860:CDS |
ACTTGGGAGGATATGTGATT+GGG | 0.499523 | 2_1:+67771153 | Msa0219860:CDS |
GGTGACCAATCCCCAGCCCT+TGG | 0.500245 | 2_1:-67771105 | None:intergenic |
GCCACCTTCCTCATTGGTGA+TGG | 0.504456 | 2_1:+67773693 | Msa0219860:CDS |
TTTGCCAATTCCAAAAGAGT+TGG | 0.511202 | 2_1:-67772436 | None:intergenic |
GCCTCAGTAACCGAAATTGA+AGG | 0.515765 | 2_1:-67771204 | None:intergenic |
AATATTTCAGATGAAAATGA+AGG | 0.518222 | 2_1:+67774010 | Msa0219860:CDS |
GAGTGCTTCTTATGGACAGT+AGG | 0.518875 | 2_1:+67773078 | Msa0219860:CDS |
GATTTCTGCAGGATCATGTA+TGG | 0.522815 | 2_1:+67773659 | Msa0219860:CDS |
GGGATATGACTTCATCATCA+TGG | 0.527240 | 2_1:-67773736 | None:intergenic |
GGTTACTGAGGCATAATGGC+TGG | 0.530808 | 2_1:+67771215 | Msa0219860:CDS |
GTCTTATCTTCAGTTTGCAA+AGG | 0.541077 | 2_1:-67770992 | None:intergenic |
GCCTACCTACTTCAGGACTA+AGG | 0.541282 | 2_1:-67772315 | None:intergenic |
ACCAGCCTTTGAAAATTCCA+TGG | 0.542279 | 2_1:-67772272 | None:intergenic |
CAGATGGGACCTTGATGCAA+TGG | 0.543941 | 2_1:+67773331 | Msa0219860:intron |
GAAGTTGTTCCATTGCATCA+AGG | 0.549004 | 2_1:-67773340 | None:intergenic |
CCCTTCAATTTCGGTTACTG+AGG | 0.554070 | 2_1:+67771203 | Msa0219860:CDS |
AGGTAATGATGTGAAGATCA+AGG | 0.555689 | 2_1:-67774212 | None:intergenic |
ACTTCCAAAGCACTTAAGAA+TGG | 0.557485 | 2_1:+67772357 | Msa0219860:CDS |
CCCGGAGCAAGTGAAGAGCC+TGG | 0.558035 | 2_1:-67773757 | None:intergenic |
TAACCGAAATTGAAGGGATG+TGG | 0.558085 | 2_1:-67771197 | None:intergenic |
ATGCAATATACCAGAACATG+TGG | 0.563320 | 2_1:-67771239 | None:intergenic |
CAAAGCACTTAAGAATGGCA+AGG | 0.571524 | 2_1:+67772362 | Msa0219860:CDS |
AGAAATATTAAAGAAAGCCA+TGG | 0.572182 | 2_1:+67772255 | Msa0219860:CDS |
GATGAGATCAATGTTCAACT+TGG | 0.572324 | 2_1:+67771136 | Msa0219860:CDS |
GTTCAGGAGGAACAAGAAAG+AGG | 0.573578 | 2_1:+67773947 | Msa0219860:intron |
ATGCGGCAATTTGAATGACA+TGG | 0.577201 | 2_1:-67773114 | None:intergenic |
AGTGCTTCTTATGGACAGTA+GGG | 0.578604 | 2_1:+67773079 | Msa0219860:CDS |
AAGATGATTGACTCAATCCA+AGG | 0.578634 | 2_1:+67771088 | Msa0219860:CDS |
CCTCAGTAACCGAAATTGAA+GGG | 0.583119 | 2_1:-67771203 | None:intergenic |
CCGGAGCAAGTGAAGAGCCT+GGG | 0.583946 | 2_1:-67773756 | None:intergenic |
TGATGATGAAGTCATATCCC+AGG | 0.589646 | 2_1:+67773739 | Msa0219860:CDS |
GTTAGAAGCTAGAAACTACA+TGG | 0.592281 | 2_1:+67772384 | Msa0219860:CDS |
CATTGGTGATGGTCTCTCAA+AGG | 0.594573 | 2_1:+67773704 | Msa0219860:CDS |
ATGAGATCAATGTTCAACTT+GGG | 0.595916 | 2_1:+67771137 | Msa0219860:CDS |
GTCCATTGCTCTCAATGAGA+AGG | 0.597178 | 2_1:+67768678 | Msa0219860:CDS |
GTCCATAAGAAGCACTCTGT+TGG | 0.598676 | 2_1:-67773072 | None:intergenic |
TATCAAAGCTTCTCTTAACA+TGG | 0.598838 | 2_1:+67774117 | Msa0219860:CDS |
CCACACCTTAGTCCTGAAGT+AGG | 0.600902 | 2_1:+67772310 | Msa0219860:CDS |
TATAGAATCCAGAAAGAACA+TGG | 0.603675 | 2_1:+67773419 | Msa0219860:CDS |
CCATAGTCGAAGAATTTCCC+CGG | 0.608178 | 2_1:-67773775 | None:intergenic |
TACCTTCTCATTGAGAGCAA+TGG | 0.609668 | 2_1:-67768680 | None:intergenic |
TTGACTCAATCCAAGGGCTG+GGG | 0.610758 | 2_1:+67771095 | Msa0219860:CDS |
AGATCAATGTTCAACTTGGG+AGG | 0.619212 | 2_1:+67771140 | Msa0219860:CDS |
GTGGCAAAGAGGTCTTGAGA+AGG | 0.619717 | 2_1:-67771178 | None:intergenic |
CTACTTCAGGACTAAGGTGT+GGG | 0.619824 | 2_1:-67772309 | None:intergenic |
GCTCAAGTTATTTATCAACA+TGG | 0.621098 | 2_1:+67774148 | Msa0219860:CDS |
TCAAAATCAGGAATCATGCA+TGG | 0.621268 | 2_1:+67768640 | Msa0219860:CDS |
GAGACCATCACCAATGAGGA+AGG | 0.621909 | 2_1:-67773697 | None:intergenic |
TGGCAAAGAGGTCTTGAGAA+GGG | 0.625651 | 2_1:-67771177 | None:intergenic |
GCCTGCAAATACAATGACAA+TGG | 0.627016 | 2_1:+67768519 | Msa0219860:exon |
GGATGACTTAGGAACTTCAA+CGG | 0.635407 | 2_1:+67773797 | Msa0219860:CDS |
ACCTTAGTCCTGAAGTAGGT+AGG | 0.650473 | 2_1:+67772314 | Msa0219860:CDS |
CCTACTTCAGGACTAAGGTG+TGG | 0.650736 | 2_1:-67772310 | None:intergenic |
TTGAGAGACCATCACCAATG+AGG | 0.655213 | 2_1:-67773701 | None:intergenic |
AGATGATTGACTCAATCCAA+GGG | 0.655644 | 2_1:+67771089 | Msa0219860:CDS |
ATTGAAGGGATGTGGCAAAG+AGG | 0.660331 | 2_1:-67771189 | None:intergenic |
ACCATCACCAATGAGGAAGG+TGG | 0.672270 | 2_1:-67773694 | None:intergenic |
TGCAATATACCAGAACATGT+GGG | 0.673880 | 2_1:-67771238 | None:intergenic |
CAGGCTCTTCACTTGCTCCG+GGG | 0.678340 | 2_1:+67773758 | Msa0219860:CDS |
TCACTTACCAAAGACGTTTG+GGG | 0.681547 | 2_1:+67772187 | Msa0219860:CDS |
AATTTGTGGAGAGAACTCAA+TGG | 0.695889 | 2_1:+67774061 | Msa0219860:CDS |
CCTGAAGTAGGTAGGCACGT+TGG | 0.714223 | 2_1:+67772322 | Msa0219860:CDS |
GAAGCTTTGATAACAGACGA+AGG | 0.721487 | 2_1:-67774106 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTAGACTATATAA+AGG | + | chr2_1:67769192-67769211 | Msa0219860:intron | 10.0% |
!!! | ATTATATATAACTAATTTTG+CGG | + | chr2_1:67769638-67769657 | Msa0219860:intron | 10.0% |
!! | ATATAAAAATGAAAAAGTAA+AGG | + | chr2_1:67770279-67770298 | Msa0219860:intron | 10.0% |
!!! | TCATTTTTTTTAAATTAATG+TGG | + | chr2_1:67770585-67770604 | Msa0219860:intron | 10.0% |
!!! | CATTTTAAAACAAATTTTTT+TGG | + | chr2_1:67770868-67770887 | Msa0219860:intron | 10.0% |
!! | ACAACAAAATATTTAATTAA+AGG | + | chr2_1:67772541-67772560 | Msa0219860:intron | 10.0% |
!!! | TAATTTATAATTAGTTTCTA+TGG | - | chr2_1:67773283-67773302 | None:intergenic | 10.0% |
!!! | TTTTTCAAATAAAATACTAT+AGG | - | chr2_1:67774273-67774292 | None:intergenic | 10.0% |
!!! | TAGTATTTTATTTGAAAAAT+AGG | + | chr2_1:67774274-67774293 | Msa0219860:three_prime_UTR | 10.0% |
!!! | AGTATTTTATTTGAAAAATA+GGG | + | chr2_1:67774275-67774294 | Msa0219860:three_prime_UTR | 10.0% |
!!! | CATATTTTTTTTTTTTTTGA+AGG | + | chr2_1:67774375-67774394 | Msa0219860:three_prime_UTR | 10.0% |
!! | TAAATTTAAATTCATTGTTG+TGG | + | chr2_1:67769008-67769027 | Msa0219860:intron | 15.0% |
!! | TTCAAATTCAATCAATTATA+TGG | + | chr2_1:67769128-67769147 | Msa0219860:intron | 15.0% |
!!! | TCTTTTGTTATTCATTTTTT+AGG | - | chr2_1:67769268-67769287 | None:intergenic | 15.0% |
!! | AGTTATATATAATTTAGGAA+AGG | - | chr2_1:67769631-67769650 | None:intergenic | 15.0% |
!! | TACTCCAAATTAAAATTATA+AGG | + | chr2_1:67770145-67770164 | Msa0219860:intron | 15.0% |
!! | ACTCCAAATTAAAATTATAA+GGG | + | chr2_1:67770146-67770165 | Msa0219860:intron | 15.0% |
!!! | TATTTTATTTTTCATTGTCA+GGG | - | chr2_1:67770217-67770236 | None:intergenic | 15.0% |
!! | ATTCTAATAAAATGACAAAT+TGG | - | chr2_1:67770335-67770354 | None:intergenic | 15.0% |
!!! | GAAGAAAAAAATTAAAGTTT+TGG | + | chr2_1:67770828-67770847 | Msa0219860:intron | 15.0% |
!!! | TATTTTAATTTGCAATACAT+TGG | - | chr2_1:67771600-67771619 | None:intergenic | 15.0% |
!! | TAACATTTCTCTATTTAATA+AGG | - | chr2_1:67771703-67771722 | None:intergenic | 15.0% |
!! | ACAAAATATTTAATTAAAGG+TGG | + | chr2_1:67772544-67772563 | Msa0219860:intron | 15.0% |
!! | ATACATGAAAATATGTTATA+TGG | + | chr2_1:67773367-67773386 | Msa0219860:CDS | 15.0% |
!!! | TTTATTACAATTTGTTTTAC+AGG | - | chr2_1:67773882-67773901 | None:intergenic | 15.0% |
!!! | ACTTGTCAAAAACAATTTTA+AGG | - | chr2_1:67768860-67768879 | None:intergenic | 20.0% |
!!! | AATTTGAAGTGATTTATGTT+TGG | - | chr2_1:67769116-67769135 | None:intergenic | 20.0% |
!! | AATTCAATCAATTATATGGT+TGG | + | chr2_1:67769132-67769151 | Msa0219860:intron | 20.0% |
!! | ATACAAAAGTGATTTATGTT+TGG | - | chr2_1:67769169-67769188 | None:intergenic | 20.0% |
!! | ATAACAAAAGATAACATATG+TGG | + | chr2_1:67769277-67769296 | Msa0219860:intron | 20.0% |
!! | TTGTCTATAAAAAATCGTAT+AGG | + | chr2_1:67769451-67769470 | Msa0219860:intron | 20.0% |
!!! | TGTTTGTTTTTAGATGTTAT+TGG | + | chr2_1:67769848-67769867 | Msa0219860:intron | 20.0% |
!!! | GTTTGTTTTTAGATGTTATT+GGG | + | chr2_1:67769849-67769868 | Msa0219860:intron | 20.0% |
!!! | AGATGATTATTTTAGTTGTT+TGG | + | chr2_1:67770030-67770049 | Msa0219860:intron | 20.0% |
!!! | CATTTTAATTTTCTAATCCA+GGG | - | chr2_1:67770122-67770141 | None:intergenic | 20.0% |
!! | CTCCAAATTAAAATTATAAG+GGG | + | chr2_1:67770147-67770166 | Msa0219860:intron | 20.0% |
!!! | CTATTTTATTTTTCATTGTC+AGG | - | chr2_1:67770218-67770237 | None:intergenic | 20.0% |
!! | AAATGGAATGAAATAATCAT+TGG | + | chr2_1:67770695-67770714 | Msa0219860:intron | 20.0% |
!!! | GGTATATTGCATTATTATTT+TGG | + | chr2_1:67771250-67771269 | Msa0219860:intron | 20.0% |
!! | TAATAAGACAAAATACTTGA+AGG | + | chr2_1:67771358-67771377 | Msa0219860:intron | 20.0% |
!! | TGCTAAAAGAAATAAACTTA+AGG | + | chr2_1:67772085-67772104 | Msa0219860:intron | 20.0% |
!!! | ATTCAAAATTGATTTAGTTC+TGG | - | chr2_1:67772767-67772786 | None:intergenic | 20.0% |
!! | CCAAAAAATTAAATTAGCAA+CGG | + | chr2_1:67772801-67772820 | Msa0219860:intron | 20.0% |
!! | TGGAATACATAATTTGAATT+TGG | - | chr2_1:67772891-67772910 | None:intergenic | 20.0% |
!!! | CTAGTTTATTTGATTTGTTT+AGG | + | chr2_1:67772998-67773017 | Msa0219860:intron | 20.0% |
!!! | TTTTTACAAAGGCAATTAAA+AGG | + | chr2_1:67773217-67773236 | Msa0219860:CDS | 20.0% |
!!! | TAAACTTTATGTTTTACAGA+TGG | + | chr2_1:67773315-67773334 | Msa0219860:intron | 20.0% |
!!! | AAACTTTATGTTTTACAGAT+GGG | + | chr2_1:67773316-67773335 | Msa0219860:intron | 20.0% |
!!! | TAACATATTTTCATGTATTC+AGG | - | chr2_1:67773365-67773384 | None:intergenic | 20.0% |
!! | TCCAAATATGTCTTAAAATT+TGG | - | chr2_1:67773630-67773649 | None:intergenic | 20.0% |
!!! | TTTAAGACATATTTGGATAA+TGG | + | chr2_1:67773633-67773652 | Msa0219860:CDS | 20.0% |
!! | AATATATATGTAAATTTGGC+CGG | - | chr2_1:67773834-67773853 | None:intergenic | 20.0% |
!!! | TCTTATTAATTTTGATGTTC+AGG | + | chr2_1:67773931-67773950 | Msa0219860:intron | 20.0% |
!! | AATATTTCAGATGAAAATGA+AGG | + | chr2_1:67774010-67774029 | Msa0219860:CDS | 20.0% |
!!! | TAAATGACATATTTTTGTCA+TGG | + | chr2_1:67774350-67774369 | Msa0219860:three_prime_UTR | 20.0% |
! | TCTCTACAAAATTCAAAATC+AGG | + | chr2_1:67768628-67768647 | Msa0219860:CDS | 25.0% |
!!! | GTCAAAAACAATTTTAAGGT+TGG | - | chr2_1:67768856-67768875 | None:intergenic | 25.0% |
!!! | AATTGTTTTTGACAAGTTTG+TGG | + | chr2_1:67768863-67768882 | Msa0219860:intron | 25.0% |
!!! | ATTGTTTTTGACAAGTTTGT+GGG | + | chr2_1:67768864-67768883 | Msa0219860:intron | 25.0% |
!!! | GTTTGGAATATTTTTTTGTC+AGG | - | chr2_1:67769099-67769118 | None:intergenic | 25.0% |
! | ATACTAATAAAACACAACCA+AGG | - | chr2_1:67769759-67769778 | None:intergenic | 25.0% |
! | AAGAAAGTAAGAGGAAATAT+TGG | + | chr2_1:67769969-67769988 | Msa0219860:intron | 25.0% |
!!! | GCATTTTAATTTTCTAATCC+AGG | - | chr2_1:67770123-67770142 | None:intergenic | 25.0% |
!!! | TGCCCCTTATAATTTTAATT+TGG | - | chr2_1:67770152-67770171 | None:intergenic | 25.0% |
!!! | ATAAAGATGATGGAAAGAAA+GGG | - | chr2_1:67770500-67770519 | None:intergenic | 25.0% |
!!! | AATAAAGATGATGGAAAGAA+AGG | - | chr2_1:67770501-67770520 | None:intergenic | 25.0% |
! | TTCTTTCCATCATCTTTATT+TGG | + | chr2_1:67770501-67770520 | Msa0219860:intron | 25.0% |
!! | ACGGAGAGAATATTTTATAA+GGG | - | chr2_1:67770633-67770652 | None:intergenic | 25.0% |
!! | AACGGAGAGAATATTTTATA+AGG | - | chr2_1:67770634-67770653 | None:intergenic | 25.0% |
! | GTCTTTCTCTTATAAAGTAA+GGG | - | chr2_1:67770743-67770762 | None:intergenic | 25.0% |
! | TGTCTTTCTCTTATAAAGTA+AGG | - | chr2_1:67770744-67770763 | None:intergenic | 25.0% |
!! | AAAAGTTGGAGTATTTATTG+AGG | + | chr2_1:67770796-67770815 | Msa0219860:intron | 25.0% |
!! | AAAGTTGGAGTATTTATTGA+GGG | + | chr2_1:67770797-67770816 | Msa0219860:intron | 25.0% |
!!! | TTAATGCTTTGAATTTTCCT+AGG | + | chr2_1:67771285-67771304 | Msa0219860:intron | 25.0% |
!! | ATTTTCATAAACACTACTTG+TGG | - | chr2_1:67771569-67771588 | None:intergenic | 25.0% |
! | TTTCTCTATTTAATAAGGTC+AGG | - | chr2_1:67771698-67771717 | None:intergenic | 25.0% |
! | CCAATAATACATGTCAATAA+AGG | - | chr2_1:67771985-67772004 | None:intergenic | 25.0% |
! | CCTTTATTGACATGTATTAT+TGG | + | chr2_1:67771982-67772001 | Msa0219860:intron | 25.0% |
!! | TTATATGAGGCATCATATTT+AGG | + | chr2_1:67772220-67772239 | Msa0219860:CDS | 25.0% |
!! | TATATGAGGCATCATATTTA+GGG | + | chr2_1:67772221-67772240 | Msa0219860:CDS | 25.0% |
! | AGAAATATTAAAGAAAGCCA+TGG | + | chr2_1:67772255-67772274 | Msa0219860:CDS | 25.0% |
!! | ATATTTCTGCTAATTCTCTT+TGG | - | chr2_1:67772492-67772511 | None:intergenic | 25.0% |
!!! | AAATTGATTTGGATTTGTTG+CGG | + | chr2_1:67772570-67772589 | Msa0219860:intron | 25.0% |
!!! | CCGTTGCTAATTTAATTTTT+TGG | - | chr2_1:67772804-67772823 | None:intergenic | 25.0% |
!!! | GTTTATTTGATTTGTTTAGG+TGG | + | chr2_1:67773001-67773020 | Msa0219860:intron | 25.0% |
! | CATAACTAGCAAAATACATA+TGG | - | chr2_1:67773154-67773173 | None:intergenic | 25.0% |
!! | CATATGTATTTTGCTAGTTA+TGG | + | chr2_1:67773152-67773171 | Msa0219860:CDS | 25.0% |
!!! | TGAACTTGTTCTTTTTACAA+AGG | + | chr2_1:67773206-67773225 | Msa0219860:CDS | 25.0% |
!! | ACATAAAGTTTAGTTTAGCA+TGG | - | chr2_1:67773307-67773326 | None:intergenic | 25.0% |
! | TCTATATGCAATTTCATTTG+TGG | - | chr2_1:67773405-67773424 | None:intergenic | 25.0% |
! | ATTATTAACATGTCACTCTT+TGG | - | chr2_1:67773520-67773539 | None:intergenic | 25.0% |
! | CATGTTAATAATTGTAGACT+TGG | + | chr2_1:67773528-67773547 | Msa0219860:intron | 25.0% |
!!! | GCCAAATTTTAAGACATATT+TGG | + | chr2_1:67773626-67773645 | Msa0219860:CDS | 25.0% |
!!! | TATTAATTTTGATGTTCAGG+AGG | + | chr2_1:67773934-67773953 | Msa0219860:intron | 25.0% |
! | ATGAAGGAAGAATACAAATA+AGG | + | chr2_1:67774026-67774045 | Msa0219860:CDS | 25.0% |
!!! | TTTTTTTTGAAGGAATGTCA+TGG | + | chr2_1:67774385-67774404 | Msa0219860:three_prime_UTR | 25.0% |
!! | TTGGAGATTTGTTACTATGA+GGG | - | chr2_1:67768741-67768760 | None:intergenic | 30.0% |
!! | ATTGGAGATTTGTTACTATG+AGG | - | chr2_1:67768742-67768761 | None:intergenic | 30.0% |
AAATCTCCAATATGAAGTCT+TGG | + | chr2_1:67768751-67768770 | Msa0219860:intron | 30.0% | |
AATCTCCAATATGAAGTCTT+GGG | + | chr2_1:67768752-67768771 | Msa0219860:intron | 30.0% | |
!!! | AGTGTGTTTGTTTTTACTAC+AGG | + | chr2_1:67768814-67768833 | Msa0219860:intron | 30.0% |
!!! | GTGTGTTTGTTTTTACTACA+GGG | + | chr2_1:67768815-67768834 | Msa0219860:intron | 30.0% |
!!! | ATTTTTTTGTCAGGTAAGAG+AGG | - | chr2_1:67769090-67769109 | None:intergenic | 30.0% |
CATATGTGGCTTAGAAAATA+TGG | + | chr2_1:67769291-67769310 | Msa0219860:intron | 30.0% | |
!! | TTGATTTGTAAAGCTGTTTG+AGG | + | chr2_1:67769353-67769372 | Msa0219860:intron | 30.0% |
! | TGATTTGTAAAGCTGTTTGA+GGG | + | chr2_1:67769354-67769373 | Msa0219860:intron | 30.0% |
ATAGACAAACACTTGTATGT+GGG | - | chr2_1:67769439-67769458 | None:intergenic | 30.0% | |
TATAGACAAACACTTGTATG+TGG | - | chr2_1:67769440-67769459 | None:intergenic | 30.0% | |
CTCATACAAACACGAATTAA+AGG | + | chr2_1:67769592-67769611 | Msa0219860:intron | 30.0% | |
! | CTATGAGTGCTACATTTTAT+TGG | + | chr2_1:67769666-67769685 | Msa0219860:intron | 30.0% |
! | TTTTCAACTCAACTCTTACA+CGG | - | chr2_1:67769693-67769712 | None:intergenic | 30.0% |
TAATAAAACACAACCAAGGT+AGG | - | chr2_1:67769755-67769774 | None:intergenic | 30.0% | |
AAAGTTTAACCCTCTTTGTT+TGG | + | chr2_1:67769924-67769943 | Msa0219860:intron | 30.0% | |
! | TTTTCTCATCCAAACAAAGA+GGG | - | chr2_1:67769936-67769955 | None:intergenic | 30.0% |
! | GGATGAGAAAAGAAAGTATA+AGG | + | chr2_1:67769945-67769964 | Msa0219860:intron | 30.0% |
GTATAAGGAAAGAAAGTAAG+AGG | + | chr2_1:67769960-67769979 | Msa0219860:intron | 30.0% | |
! | GTAAGAGGAAATATTGGTTA+AGG | + | chr2_1:67769975-67769994 | Msa0219860:intron | 30.0% |
GAAAGTGAGAAGAAAATGAA+AGG | + | chr2_1:67770060-67770079 | Msa0219860:intron | 30.0% | |
CAGCATATTCGTAAATAAAG+TGG | + | chr2_1:67770170-67770189 | Msa0219860:intron | 30.0% | |
CAAATTATAAAGTGGAAGCA+AGG | + | chr2_1:67770308-67770327 | Msa0219860:intron | 30.0% | |
!!! | AAAGAAAGTCTGGTTTTAGT+GGG | - | chr2_1:67770416-67770435 | None:intergenic | 30.0% |
AAAAATGTGATTCCACAGTT+TGG | - | chr2_1:67770456-67770475 | None:intergenic | 30.0% | |
TTGGATCCAAATAAAGATGA+TGG | - | chr2_1:67770510-67770529 | None:intergenic | 30.0% | |
TTGACACACAGATTAAGAAA+TGG | + | chr2_1:67770678-67770697 | Msa0219860:intron | 30.0% | |
AAATTGTGTGAGAGAAAAGT+TGG | + | chr2_1:67770782-67770801 | Msa0219860:intron | 30.0% | |
GTATTTATTGAGGGTAAAGT+TGG | + | chr2_1:67770806-67770825 | Msa0219860:intron | 30.0% | |
!! | AAGTGACACTCATTTTGAAA+CGG | + | chr2_1:67770894-67770913 | Msa0219860:intron | 30.0% |
TGAAGATAAGACCAAAAGTT+TGG | + | chr2_1:67771003-67771022 | Msa0219860:CDS | 30.0% | |
GAAGATAAGACCAAAAGTTT+GGG | + | chr2_1:67771004-67771023 | Msa0219860:CDS | 30.0% | |
TTGAATTTAGCAATGCTTCT+CGG | - | chr2_1:67771048-67771067 | None:intergenic | 30.0% | |
ATCATCTTCAATGTTGCAAT+AGG | - | chr2_1:67771076-67771095 | None:intergenic | 30.0% | |
ATGAGATCAATGTTCAACTT+GGG | + | chr2_1:67771137-67771156 | Msa0219860:CDS | 30.0% | |
TCTCTCTTAACATGACAAAA+TGG | - | chr2_1:67771318-67771337 | None:intergenic | 30.0% | |
TGTGGTCCTTAAAAATGTTT+CGG | - | chr2_1:67771551-67771570 | None:intergenic | 30.0% | |
GTACATAAAGTAGCTTACTT+AGG | + | chr2_1:67772059-67772078 | Msa0219860:intron | 30.0% | |
GGAAAATGATTTGATTAGTG+TGG | + | chr2_1:67772106-67772125 | Msa0219860:intron | 30.0% | |
ATTTGATTAGTGTGGTTGTT+TGG | + | chr2_1:67772114-67772133 | Msa0219860:intron | 30.0% | |
!! | AGACGTTTTCAGGAAATTTT+TGG | + | chr2_1:67772141-67772160 | Msa0219860:intron | 30.0% |
! | TAACCAAATACCAACTCTTT+TGG | + | chr2_1:67772426-67772445 | Msa0219860:CDS | 30.0% |
!! | ATTCCAAAAGAGTTGGTATT+TGG | - | chr2_1:67772432-67772451 | None:intergenic | 30.0% |
!!! | AATACCAACTCTTTTGGAAT+TGG | + | chr2_1:67772432-67772451 | Msa0219860:CDS | 30.0% |
TTCTTGGCAGAAATTAATGT+TGG | - | chr2_1:67772911-67772930 | None:intergenic | 30.0% | |
TATGAAACTTGTGATGTTCT+TGG | - | chr2_1:67772927-67772946 | None:intergenic | 30.0% | |
!! | TATTTGATTTGTTTAGGTGG+TGG | + | chr2_1:67773004-67773023 | Msa0219860:intron | 30.0% |
! | TGGTTTTTGTAAGTTCTATG+CGG | - | chr2_1:67773134-67773153 | None:intergenic | 30.0% |
GATGATATCTTTGACACTTA+TGG | + | chr2_1:67773174-67773193 | Msa0219860:CDS | 30.0% | |
TATAGAATCCAGAAAGAACA+TGG | + | chr2_1:67773419-67773438 | Msa0219860:CDS | 30.0% | |
!!! | TCTTTTCAGGTAAGAAACAA+CGG | - | chr2_1:67773450-67773469 | None:intergenic | 30.0% |
! | AGATTCTTACTGTTCTTTTC+AGG | - | chr2_1:67773463-67773482 | None:intergenic | 30.0% |
CATTTCTTGAAGAAGCTAAA+TGG | + | chr2_1:67773586-67773605 | Msa0219860:CDS | 30.0% | |
GAAGCTAAATGGTTCAATAA+TGG | + | chr2_1:67773597-67773616 | Msa0219860:CDS | 30.0% | |
ATACAAATAAGGATGCTACT+AGG | + | chr2_1:67774037-67774056 | Msa0219860:CDS | 30.0% | |
TACAAATAAGGATGCTACTA+GGG | + | chr2_1:67774038-67774057 | Msa0219860:CDS | 30.0% | |
TATCAAAGCTTCTCTTAACA+TGG | + | chr2_1:67774117-67774136 | Msa0219860:CDS | 30.0% | |
GCTCAAGTTATTTATCAACA+TGG | + | chr2_1:67774148-67774167 | Msa0219860:CDS | 30.0% | |
TCTTCAACTCAATTGCTAAT+AGG | - | chr2_1:67774235-67774254 | None:intergenic | 30.0% | |
! | ACACTTGCTCGTTGTAATTT+TGG | + | chr2_1:67768577-67768596 | Msa0219860:CDS | 35.0% |
! | CACTTGCTCGTTGTAATTTT+GGG | + | chr2_1:67768578-67768597 | Msa0219860:CDS | 35.0% |
TCAAAATCAGGAATCATGCA+TGG | + | chr2_1:67768640-67768659 | Msa0219860:CDS | 35.0% | |
TGCATGGTAAATTATCGATC+AGG | + | chr2_1:67768656-67768675 | Msa0219860:CDS | 35.0% | |
AGTTACCCAAGACTTCATAT+TGG | - | chr2_1:67768760-67768779 | None:intergenic | 35.0% | |
TGGGACAAAAATGTGTATTG+TGG | - | chr2_1:67769420-67769439 | None:intergenic | 35.0% | |
TTTGTATGAGACAGGTTCTT+CGG | - | chr2_1:67769582-67769601 | None:intergenic | 35.0% | |
AATTCGTGTTTGTATGAGAC+AGG | - | chr2_1:67769590-67769609 | None:intergenic | 35.0% | |
AAAATGTAGCACTCATAGCT+AGG | - | chr2_1:67769664-67769683 | None:intergenic | 35.0% | |
AAATTTGCAATCACCTACCT+TGG | + | chr2_1:67769739-67769758 | Msa0219860:intron | 35.0% | |
! | CTTTTCTCATCCAAACAAAG+AGG | - | chr2_1:67769937-67769956 | None:intergenic | 35.0% |
GAATGTGAGTAGAAAGTGAA+TGG | + | chr2_1:67770001-67770020 | Msa0219860:intron | 35.0% | |
GAAAATGACACATATATCCC+TGG | + | chr2_1:67770102-67770121 | Msa0219860:intron | 35.0% | |
TAAATAAAGTGGCAGCGTAT+TGG | + | chr2_1:67770181-67770200 | Msa0219860:intron | 35.0% | |
GGCACGATCAAATTATAAAG+TGG | + | chr2_1:67770300-67770319 | Msa0219860:intron | 35.0% | |
AAACCTTTCCTTGCAAAACT+GGG | - | chr2_1:67770381-67770400 | None:intergenic | 35.0% | |
! | TTTTGCAAGGAAAGGTTTCT+GGG | + | chr2_1:67770383-67770402 | Msa0219860:intron | 35.0% |
!!! | GAAAGAAAGTCTGGTTTTAG+TGG | - | chr2_1:67770417-67770436 | None:intergenic | 35.0% |
TTATTTGGATCCAAACGATG+CGG | + | chr2_1:67770516-67770535 | Msa0219860:intron | 35.0% | |
!! | AAGCGACACTCATTTTGAAA+CGG | - | chr2_1:67770652-67770671 | None:intergenic | 35.0% |
!! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr2_1:67770653-67770672 | Msa0219860:intron | 35.0% |
GTCTTATCTTCAGTTTGCAA+AGG | - | chr2_1:67770995-67771014 | None:intergenic | 35.0% | |
! | AAGATGATTGACTCAATCCA+AGG | + | chr2_1:67771088-67771107 | Msa0219860:CDS | 35.0% |
! | AGATGATTGACTCAATCCAA+GGG | + | chr2_1:67771089-67771108 | Msa0219860:CDS | 35.0% |
CATTGATCTCATCTTCCAAA+TGG | - | chr2_1:67771129-67771148 | None:intergenic | 35.0% | |
GATGAGATCAATGTTCAACT+TGG | + | chr2_1:67771136-67771155 | Msa0219860:CDS | 35.0% | |
TGCAATATACCAGAACATGT+GGG | - | chr2_1:67771241-67771260 | None:intergenic | 35.0% | |
ATGCAATATACCAGAACATG+TGG | - | chr2_1:67771242-67771261 | None:intergenic | 35.0% | |
! | CTTTGAATTTTCCTAGGCTT+TGG | + | chr2_1:67771291-67771310 | Msa0219860:intron | 35.0% |
!!! | GAAGGTCAATTTTGATGATG+AGG | + | chr2_1:67771376-67771395 | Msa0219860:intron | 35.0% |
! | AGTGTCCCGAAACATTTTTA+AGG | + | chr2_1:67771542-67771561 | Msa0219860:intron | 35.0% |
GTGGTCCTTAAAAATGTTTC+GGG | - | chr2_1:67771550-67771569 | None:intergenic | 35.0% | |
ACACATGAGACACTCTTTAA+CGG | + | chr2_1:67771668-67771687 | Msa0219860:intron | 35.0% | |
CAAACCAAAATTCTTGGACT+TGG | - | chr2_1:67771794-67771813 | None:intergenic | 35.0% | |
!!! | CAAGTCCAAGAATTTTGGTT+TGG | + | chr2_1:67771792-67771811 | Msa0219860:intron | 35.0% |
TGTGACCAAACCAAAATTCT+TGG | - | chr2_1:67771901-67771920 | None:intergenic | 35.0% | |
TGTGACCAAACCAAAATTCT+TGG | + | chr2_1:67771901-67771920 | Msa0219860:intron | 35.0% | |
!! | AGGAAATTTTTGGACAAGAG+TGG | + | chr2_1:67772151-67772170 | Msa0219860:CDS | 35.0% |
AATCACTTACCAAAGACGTT+TGG | + | chr2_1:67772185-67772204 | Msa0219860:CDS | 35.0% | |
ATCACTTACCAAAGACGTTT+GGG | + | chr2_1:67772186-67772205 | Msa0219860:CDS | 35.0% | |
GGGTATGTTGAGTTTATATG+AGG | + | chr2_1:67772207-67772226 | Msa0219860:CDS | 35.0% | |
! | GAAAGCCATGGAATTTTCAA+AGG | + | chr2_1:67772267-67772286 | Msa0219860:CDS | 35.0% |
!! | TAAGTGCTTTGGAAGTGTTA+AGG | - | chr2_1:67772353-67772372 | None:intergenic | 35.0% |
! | ACTTCCAAAGCACTTAAGAA+TGG | + | chr2_1:67772357-67772376 | Msa0219860:CDS | 35.0% |
GTTAGAAGCTAGAAACTACA+TGG | + | chr2_1:67772384-67772403 | Msa0219860:CDS | 35.0% | |
TTTGCCAATTCCAAAAGAGT+TGG | - | chr2_1:67772439-67772458 | None:intergenic | 35.0% | |
! | ATTCTCTTTGGTGTAATGAC+TGG | - | chr2_1:67772480-67772499 | None:intergenic | 35.0% |
GAGAATTAGCAGAAATATGC+AGG | + | chr2_1:67772494-67772513 | Msa0219860:CDS | 35.0% | |
AAAGGTGGACGAAATTGATT+TGG | + | chr2_1:67772559-67772578 | Msa0219860:intron | 35.0% | |
AAAATTGTCACGCATTCACA+TGG | - | chr2_1:67772737-67772756 | None:intergenic | 35.0% | |
CAATTTGAATGACATGGTTC+TGG | - | chr2_1:67773111-67773130 | None:intergenic | 35.0% | |
!! | TTGGTGATTAATTTGTGCAG+TGG | + | chr2_1:67773547-67773566 | Msa0219860:intron | 35.0% |
AATTTGTGGAGAGAACTCAA+TGG | + | chr2_1:67774061-67774080 | Msa0219860:CDS | 35.0% | |
!! | AACAGACGAAGGTATGTTTT+TGG | - | chr2_1:67774098-67774117 | None:intergenic | 35.0% |
AGGTAATGATGTGAAGATCA+AGG | - | chr2_1:67774215-67774234 | None:intergenic | 35.0% | |
GCCTGCAAATACAATGACAA+TGG | + | chr2_1:67768519-67768538 | Msa0219860:exon | 40.0% | |
GCCATTGTCATTGTATTTGC+AGG | - | chr2_1:67768523-67768542 | None:intergenic | 40.0% | |
TACCTTCTCATTGAGAGCAA+TGG | - | chr2_1:67768683-67768702 | None:intergenic | 40.0% | |
TTGAGGGACAGACAAATTAG+AGG | + | chr2_1:67769370-67769389 | Msa0219860:intron | 40.0% | |
TTGTATGAGACAGGTTCTTC+GGG | - | chr2_1:67769581-67769600 | None:intergenic | 40.0% | |
! | ATTTTCTCCACGTGTGTTGT+AGG | - | chr2_1:67769790-67769809 | None:intergenic | 40.0% |
GAAACCTTTCCTTGCAAAAC+TGG | - | chr2_1:67770382-67770401 | None:intergenic | 40.0% | |
! | GTTTTGCAAGGAAAGGTTTC+TGG | + | chr2_1:67770382-67770401 | Msa0219860:intron | 40.0% |
CTTAGAGAGGAAAGAAAGTC+TGG | - | chr2_1:67770426-67770445 | None:intergenic | 40.0% | |
GTTTGGTTGTTGTCTTAGAG+AGG | - | chr2_1:67770439-67770458 | None:intergenic | 40.0% | |
CTAAGACAACAACCAAACTG+TGG | + | chr2_1:67770441-67770460 | Msa0219860:intron | 40.0% | |
! | ATGATGGAAAGAAAGGGTGA+AGG | - | chr2_1:67770494-67770513 | None:intergenic | 40.0% |
!! | TCTGACTTGACCCAAACTTT+TGG | - | chr2_1:67771017-67771036 | None:intergenic | 40.0% |
AGATCAATGTTCAACTTGGG+AGG | + | chr2_1:67771140-67771159 | Msa0219860:CDS | 40.0% | |
AACTTGGGAGGATATGTGAT+TGG | + | chr2_1:67771152-67771171 | Msa0219860:CDS | 40.0% | |
ACTTGGGAGGATATGTGATT+GGG | + | chr2_1:67771153-67771172 | Msa0219860:CDS | 40.0% | |
TTGCCACATCCCTTCAATTT+CGG | + | chr2_1:67771194-67771213 | Msa0219860:CDS | 40.0% | |
TAACCGAAATTGAAGGGATG+TGG | - | chr2_1:67771200-67771219 | None:intergenic | 40.0% | |
CCTCAGTAACCGAAATTGAA+GGG | - | chr2_1:67771206-67771225 | None:intergenic | 40.0% | |
TTTCGGTTACTGAGGCATAA+TGG | + | chr2_1:67771211-67771230 | Msa0219860:CDS | 40.0% | |
GTACTCGAGAAAATCTTGTG+TGG | + | chr2_1:67771767-67771786 | Msa0219860:intron | 40.0% | |
! | TGGACCAAGTCCAAGAATTT+TGG | + | chr2_1:67771787-67771806 | Msa0219860:intron | 40.0% |
!!! | CAGGACCAAGAATTTTGGTT+TGG | - | chr2_1:67771909-67771928 | None:intergenic | 40.0% |
! | TGGATCAGGACCAAGAATTT+TGG | - | chr2_1:67771914-67771933 | None:intergenic | 40.0% |
TACAACGAGAAACACTAGTG+TGG | - | chr2_1:67771934-67771953 | None:intergenic | 40.0% | |
! | GTTTGGTTGTAGACGTTTTC+AGG | + | chr2_1:67772131-67772150 | Msa0219860:intron | 40.0% |
TCACTTACCAAAGACGTTTG+GGG | + | chr2_1:67772187-67772206 | Msa0219860:CDS | 40.0% | |
! | ACCAGCCTTTGAAAATTCCA+TGG | - | chr2_1:67772275-67772294 | None:intergenic | 40.0% |
CTTGCCATTCTTAAGTGCTT+TGG | - | chr2_1:67772364-67772383 | None:intergenic | 40.0% | |
! | CAAAGCACTTAAGAATGGCA+AGG | + | chr2_1:67772362-67772381 | Msa0219860:CDS | 40.0% |
TTTGTCTGATCTCGATCCAA+CGG | + | chr2_1:67772703-67772722 | Msa0219860:intron | 40.0% | |
!! | TTTAGGTGGTGGAAAGAGTT+GGG | + | chr2_1:67773015-67773034 | Msa0219860:intron | 40.0% |
!! | TTGGGACTTGTTGACAAACT+TGG | + | chr2_1:67773033-67773052 | Msa0219860:CDS | 40.0% |
AGTGCTTCTTATGGACAGTA+GGG | + | chr2_1:67773079-67773098 | Msa0219860:CDS | 40.0% | |
ATGCGGCAATTTGAATGACA+TGG | - | chr2_1:67773117-67773136 | None:intergenic | 40.0% | |
GAAGTTGTTCCATTGCATCA+AGG | - | chr2_1:67773343-67773362 | None:intergenic | 40.0% | |
!! | GATAATGGAGTGATTTCTGC+AGG | + | chr2_1:67773648-67773667 | Msa0219860:CDS | 40.0% |
GATTTCTGCAGGATCATGTA+TGG | + | chr2_1:67773659-67773678 | Msa0219860:CDS | 40.0% | |
GGGATATGACTTCATCATCA+TGG | - | chr2_1:67773739-67773758 | None:intergenic | 40.0% | |
! | TGATGATGAAGTCATATCCC+AGG | + | chr2_1:67773739-67773758 | Msa0219860:CDS | 40.0% |
GGATGACTTAGGAACTTCAA+CGG | + | chr2_1:67773797-67773816 | Msa0219860:CDS | 40.0% | |
!!! | CGAAGGTATGTTTTTGGTCA+TGG | - | chr2_1:67774092-67774111 | None:intergenic | 40.0% |
! | GAAGCTTTGATAACAGACGA+AGG | - | chr2_1:67774109-67774128 | None:intergenic | 40.0% |
GTCCATTGCTCTCAATGAGA+AGG | + | chr2_1:67768678-67768697 | Msa0219860:CDS | 45.0% | |
GAGAATTCCTACAACACACG+TGG | + | chr2_1:67769780-67769799 | Msa0219860:intron | 45.0% | |
TGGGCAGCAGAAACATTGTA+CGG | + | chr2_1:67769868-67769887 | Msa0219860:intron | 45.0% | |
GATGTGATTTCCGCATCGTT+TGG | - | chr2_1:67770529-67770548 | None:intergenic | 45.0% | |
! | ATTGACTCAATCCAAGGGCT+GGG | + | chr2_1:67771094-67771113 | Msa0219860:CDS | 45.0% |
TGGCAAAGAGGTCTTGAGAA+GGG | - | chr2_1:67771180-67771199 | None:intergenic | 45.0% | |
ATTGAAGGGATGTGGCAAAG+AGG | - | chr2_1:67771192-67771211 | None:intergenic | 45.0% | |
CCCTTCAATTTCGGTTACTG+AGG | + | chr2_1:67771203-67771222 | Msa0219860:CDS | 45.0% | |
GCCTCAGTAACCGAAATTGA+AGG | - | chr2_1:67771207-67771226 | None:intergenic | 45.0% | |
GACAAAATGGACCAAAGCCT+AGG | - | chr2_1:67771305-67771324 | None:intergenic | 45.0% | |
GAGAGAAGAGAAGAGAGAGA+AGG | + | chr2_1:67771863-67771882 | Msa0219860:intron | 45.0% | |
GAGAAACACTAGTGTGGATC+AGG | - | chr2_1:67771928-67771947 | None:intergenic | 45.0% | |
CAACATACCCCAAACGTCTT+TGG | - | chr2_1:67772197-67772216 | None:intergenic | 45.0% | |
! | GCCATGGAATTTTCAAAGGC+TGG | + | chr2_1:67772271-67772290 | Msa0219860:CDS | 45.0% |
CTACTTCAGGACTAAGGTGT+GGG | - | chr2_1:67772312-67772331 | None:intergenic | 45.0% | |
ACCTTAGTCCTGAAGTAGGT+AGG | + | chr2_1:67772314-67772333 | Msa0219860:CDS | 45.0% | |
ACGCGTTCATCAGAAGTAGT+AGG | + | chr2_1:67772603-67772622 | Msa0219860:intron | 45.0% | |
TCACATGGTCAAGAAACCGT+TGG | - | chr2_1:67772722-67772741 | None:intergenic | 45.0% | |
!! | GTTTAGGTGGTGGAAAGAGT+TGG | + | chr2_1:67773014-67773033 | Msa0219860:intron | 45.0% |
! | GACCAACAGAGTGCTTCTTA+TGG | + | chr2_1:67773070-67773089 | Msa0219860:CDS | 45.0% |
!! | GTCCATAAGAAGCACTCTGT+TGG | - | chr2_1:67773075-67773094 | None:intergenic | 45.0% |
GAGTGCTTCTTATGGACAGT+AGG | + | chr2_1:67773078-67773097 | Msa0219860:CDS | 45.0% | |
! | CGGTTAGTCCATGTTCTTTC+TGG | - | chr2_1:67773430-67773449 | None:intergenic | 45.0% |
TTGAGAGACCATCACCAATG+AGG | - | chr2_1:67773704-67773723 | None:intergenic | 45.0% | |
!! | CATTGGTGATGGTCTCTCAA+AGG | + | chr2_1:67773704-67773723 | Msa0219860:CDS | 45.0% |
CCATAGTCGAAGAATTTCCC+CGG | - | chr2_1:67773778-67773797 | None:intergenic | 45.0% | |
CGGGGAAATTCTTCGACTAT+GGG | + | chr2_1:67773776-67773795 | Msa0219860:CDS | 45.0% | |
CTTCGACTATGGGATGACTT+AGG | + | chr2_1:67773786-67773805 | Msa0219860:CDS | 45.0% | |
TTCAACGGTATCACTTGCTC+CGG | + | chr2_1:67773812-67773831 | Msa0219860:intron | 45.0% | |
GTTCAGGAGGAACAAGAAAG+AGG | + | chr2_1:67773947-67773966 | Msa0219860:intron | 45.0% | |
GGATGCTACTAGGGAATTTG+TGG | + | chr2_1:67774047-67774066 | Msa0219860:CDS | 45.0% | |
!! | TTTATGTATAATATAAAATT+GGG | - | chr2_1:67769066-67769085 | None:intergenic | 5.0% |
!! | ATTTATGTATAATATAAAAT+TGG | - | chr2_1:67769067-67769086 | None:intergenic | 5.0% |
!! | AAATTAGTTATATATAATTT+AGG | - | chr2_1:67769636-67769655 | None:intergenic | 5.0% |
!!! | TAAAGAATAAATATTTATTT+TGG | + | chr2_1:67771631-67771650 | Msa0219860:intron | 5.0% |
!! | AAAAAATATATATGTAAATT+TGG | - | chr2_1:67773838-67773857 | None:intergenic | 5.0% |
GCAAAACTGGGCGGAAAGTA+GGG | - | chr2_1:67770369-67770388 | None:intergenic | 50.0% | |
TGCAAAACTGGGCGGAAAGT+AGG | - | chr2_1:67770370-67770389 | None:intergenic | 50.0% | |
! | ACTTTCCGCCCAGTTTTGCA+AGG | + | chr2_1:67770370-67770389 | Msa0219860:intron | 50.0% |
CCTTTCCTTGCAAAACTGGG+CGG | - | chr2_1:67770378-67770397 | None:intergenic | 50.0% | |
! | AAGGAAAGGTTTCTGGGCGT+GGG | + | chr2_1:67770389-67770408 | Msa0219860:intron | 50.0% |
! | GATTGACTCAATCCAAGGGC+TGG | + | chr2_1:67771093-67771112 | Msa0219860:CDS | 50.0% |
TTGACTCAATCCAAGGGCTG+GGG | + | chr2_1:67771095-67771114 | Msa0219860:CDS | 50.0% | |
GTGGCAAAGAGGTCTTGAGA+AGG | - | chr2_1:67771181-67771200 | None:intergenic | 50.0% | |
GGTTACTGAGGCATAATGGC+TGG | + | chr2_1:67771215-67771234 | Msa0219860:CDS | 50.0% | |
CCTACTTCAGGACTAAGGTG+TGG | - | chr2_1:67772313-67772332 | None:intergenic | 50.0% | |
CCACACCTTAGTCCTGAAGT+AGG | + | chr2_1:67772310-67772329 | Msa0219860:CDS | 50.0% | |
GCCTACCTACTTCAGGACTA+AGG | - | chr2_1:67772318-67772337 | None:intergenic | 50.0% | |
CAGATGGGACCTTGATGCAA+TGG | + | chr2_1:67773331-67773350 | Msa0219860:intron | 50.0% | |
ATGCATGCCACCTTCCTCAT+TGG | + | chr2_1:67773687-67773706 | Msa0219860:CDS | 50.0% | |
ACCATCACCAATGAGGAAGG+TGG | - | chr2_1:67773697-67773716 | None:intergenic | 50.0% | |
GAGACCATCACCAATGAGGA+AGG | - | chr2_1:67773700-67773719 | None:intergenic | 50.0% | |
CCGGGGAAATTCTTCGACTA+TGG | + | chr2_1:67773775-67773794 | Msa0219860:CDS | 50.0% | |
TGAGACAGGTTCTTCGGGTG+CGG | - | chr2_1:67769576-67769595 | None:intergenic | 55.0% | |
! | CCGCCCAGTTTTGCAAGGAA+AGG | + | chr2_1:67770375-67770394 | Msa0219860:intron | 55.0% |
! | CAAGGAAAGGTTTCTGGGCG+TGG | + | chr2_1:67770388-67770407 | Msa0219860:intron | 55.0% |
TCAATCCAAGGGCTGGGGAT+TGG | + | chr2_1:67771100-67771119 | Msa0219860:CDS | 55.0% | |
!! | GCTGGGGATTGGTCACCATT+TGG | + | chr2_1:67771111-67771130 | Msa0219860:CDS | 55.0% |
! | AATGGCTGGCCCACATGTTC+TGG | + | chr2_1:67771229-67771248 | Msa0219860:CDS | 55.0% |
CCAACGTGCCTACCTACTTC+AGG | - | chr2_1:67772325-67772344 | None:intergenic | 55.0% | |
CCTGAAGTAGGTAGGCACGT+TGG | + | chr2_1:67772322-67772341 | Msa0219860:CDS | 55.0% | |
GCCACCTTCCTCATTGGTGA+TGG | + | chr2_1:67773693-67773712 | Msa0219860:CDS | 55.0% | |
GAGACAGGTTCTTCGGGTGC+GGG | - | chr2_1:67769575-67769594 | None:intergenic | 60.0% | |
CCGGAGCAAGTGAAGAGCCT+GGG | - | chr2_1:67773759-67773778 | None:intergenic | 60.0% | |
CCCAGGCTCTTCACTTGCTC+CGG | + | chr2_1:67773756-67773775 | Msa0219860:CDS | 60.0% | |
CCAGGCTCTTCACTTGCTCC+GGG | + | chr2_1:67773757-67773776 | Msa0219860:CDS | 60.0% | |
CAGGCTCTTCACTTGCTCCG+GGG | + | chr2_1:67773758-67773777 | Msa0219860:CDS | 60.0% | |
GGTGACCAATCCCCAGCCCT+TGG | - | chr2_1:67771108-67771127 | None:intergenic | 65.0% | |
CCCGGAGCAAGTGAAGAGCC+TGG | - | chr2_1:67773760-67773779 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 67768509 | 67774412 | 67768509 | ID=Msa0219860;Name=Msa0219860 |
chr2_1 | mRNA | 67768509 | 67774412 | 67768509 | ID=Msa0219860-mRNA-1;Parent=Msa0219860;Name=Msa0219860-mRNA-1;_AED=0.36;_eAED=0.36;_QI=23|1|1|1|1|1|7|166|569 |
chr2_1 | exon | 67768509 | 67768699 | 67768509 | ID=Msa0219860-mRNA-1:exon:19202;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67770986 | 67771250 | 67770986 | ID=Msa0219860-mRNA-1:exon:19203;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67772143 | 67772515 | 67772143 | ID=Msa0219860-mRNA-1:exon:19204;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67773020 | 67773238 | 67773020 | ID=Msa0219860-mRNA-1:exon:19205;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67773334 | 67773472 | 67773334 | ID=Msa0219860-mRNA-1:exon:19206;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67773567 | 67773818 | 67773567 | ID=Msa0219860-mRNA-1:exon:19207;Parent=Msa0219860-mRNA-1 |
chr2_1 | exon | 67773953 | 67774412 | 67773953 | ID=Msa0219860-mRNA-1:exon:19208;Parent=Msa0219860-mRNA-1 |
chr2_1 | five_prime_UTR | 67768509 | 67768531 | 67768509 | ID=Msa0219860-mRNA-1:five_prime_utr;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67768532 | 67768699 | 67768532 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67770986 | 67771250 | 67770986 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67772143 | 67772515 | 67772143 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67773020 | 67773238 | 67773020 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67773334 | 67773472 | 67773334 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67773567 | 67773818 | 67773567 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | CDS | 67773953 | 67774246 | 67773953 | ID=Msa0219860-mRNA-1:cds;Parent=Msa0219860-mRNA-1 |
chr2_1 | three_prime_UTR | 67774247 | 67774412 | 67774247 | ID=Msa0219860-mRNA-1:three_prime_utr;Parent=Msa0219860-mRNA-1 |
Gene Sequence |
Protein sequence |