Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361040 | XP_003603966.1 | 97.794 | 544 | 12 | 0 | 1 | 544 | 19 | 562 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361040 | sp|Q93ZE9|SFH3_ARATH | 63.722 | 532 | 165 | 6 | 4 | 529 | 20 | 529 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361040 | G7J768 | 97.794 | 544 | 12 | 0 | 1 | 544 | 19 | 562 | 0.0 | 1105 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003350 | Msa1361040 | 0.802592 | 5.215519e-49 | -8.615850e-47 |
| Msa0030050 | Msa1361040 | 0.812551 | 4.004616e-51 | -8.615850e-47 |
| Msa0037180 | Msa1361040 | 0.850885 | 1.271422e-60 | -8.615850e-47 |
| Msa0037720 | Msa1361040 | 0.803714 | 3.056194e-49 | -8.615850e-47 |
| Msa0052780 | Msa1361040 | 0.802017 | 6.847360e-49 | -8.615850e-47 |
| Msa0076640 | Msa1361040 | 0.832369 | 9.834842e-56 | -8.615850e-47 |
| Msa0080060 | Msa1361040 | -0.802336 | 5.887286e-49 | -8.615850e-47 |
| Msa0081700 | Msa1361040 | -0.816547 | 5.226653e-52 | -8.615850e-47 |
| Msa0092220 | Msa1361040 | 0.857768 | 1.303287e-62 | -8.615850e-47 |
| Msa0093740 | Msa1361040 | 0.820316 | 7.316611e-53 | -8.615850e-47 |
| Msa0099090 | Msa1361040 | -0.808023 | 3.795686e-50 | -8.615850e-47 |
| Msa1344930 | Msa1361040 | 0.835588 | 1.537233e-56 | -8.615850e-47 |
| Msa1345390 | Msa1361040 | 0.816234 | 6.142242e-52 | -8.615850e-47 |
| Msa1356100 | Msa1361040 | -0.806555 | 7.772326e-50 | -8.615850e-47 |
| Msa1361040 | Msa1364970 | 0.809087 | 2.250226e-50 | -8.615850e-47 |
| Msa1361040 | Msa1366480 | 0.811855 | 5.682543e-51 | -8.615850e-47 |
| Msa1361040 | Msa1367460 | 0.811649 | 6.300817e-51 | -8.615850e-47 |
| Msa1361040 | Msa1368400 | 0.923955 | 1.340104e-89 | -8.615850e-47 |
| Msa1361040 | Msa1373990 | 0.811429 | 7.031751e-51 | -8.615850e-47 |
| Msa1361040 | Msa1377980 | -0.800589 | 1.342866e-48 | -8.615850e-47 |
| Msa1361040 | Msa1383190 | 0.943170 | 1.948773e-102 | -8.615850e-47 |
| Msa1361040 | Msa1384410 | -0.818193 | 2.227455e-52 | -8.615850e-47 |
| Msa1361040 | Msa1388720 | -0.815472 | 9.084689e-52 | -8.615850e-47 |
| Msa1361040 | Msa1398120 | 0.800961 | 1.127492e-48 | -8.615850e-47 |
| Msa1361040 | Msa1401110 | 0.819281 | 1.260949e-52 | -8.615850e-47 |
| Msa1361040 | Msa1413150 | 0.804383 | 2.217709e-49 | -8.615850e-47 |
| Msa1361040 | Msa1417600 | 0.805800 | 1.120798e-49 | -8.615850e-47 |
| Msa1361040 | Msa1429470 | 0.802003 | 6.893007e-49 | -8.615850e-47 |
| Msa1361040 | Msa1432730 | -0.801741 | 7.801973e-49 | -8.615850e-47 |
| Msa1361040 | Msa1435550 | 0.808873 | 2.500496e-50 | -8.615850e-47 |
| Msa1361040 | Msa1453430 | 0.801669 | 8.072952e-49 | -8.615850e-47 |
| Msa1361040 | Msa1459920 | 0.819990 | 8.687072e-53 | -8.615850e-47 |
| Msa0615070 | Msa1361040 | 0.801259 | 9.795154e-49 | -8.615850e-47 |
| Msa0617470 | Msa1361040 | -0.812398 | 4.325957e-51 | -8.615850e-47 |
| Msa0619300 | Msa1361040 | 0.829497 | 4.979655e-55 | -8.615850e-47 |
| Msa0622800 | Msa1361040 | -0.806343 | 8.613167e-50 | -8.615850e-47 |
| Msa0625900 | Msa1361040 | -0.800741 | 1.250225e-48 | -8.615850e-47 |
| Msa0633630 | Msa1361040 | 0.800115 | 1.676356e-48 | -8.615850e-47 |
| Msa0654500 | Msa1361040 | -0.803138 | 4.022170e-49 | -8.615850e-47 |
| Msa0657340 | Msa1361040 | 0.805487 | 1.303400e-49 | -8.615850e-47 |
| Msa0663690 | Msa1361040 | -0.800259 | 1.567486e-48 | -8.615850e-47 |
| Msa0672090 | Msa1361040 | 0.811129 | 8.168964e-51 | -8.615850e-47 |
| Msa0672980 | Msa1361040 | 0.803088 | 4.118684e-49 | -8.615850e-47 |
| Msa0682160 | Msa1361040 | 0.817951 | 2.526276e-52 | -8.615850e-47 |
| Msa0690100 | Msa1361040 | -0.802307 | 5.969215e-49 | -8.615850e-47 |
| Msa0700250 | Msa1361040 | -0.803288 | 3.745285e-49 | -8.615850e-47 |
| Msa0702690 | Msa1361040 | -0.802701 | 4.952103e-49 | -8.615850e-47 |
| Msa0704690 | Msa1361040 | 0.828542 | 8.483877e-55 | -8.615850e-47 |
| Msa0705520 | Msa1361040 | 0.802557 | 5.301992e-49 | -8.615850e-47 |
| Msa0715040 | Msa1361040 | 0.810181 | 1.309701e-50 | -8.615850e-47 |
| Msa0789220 | Msa1361040 | 0.807301 | 5.403550e-50 | -8.615850e-47 |
| Msa0826370 | Msa1361040 | 0.800048 | 1.730110e-48 | -8.615850e-47 |
| Msa0826380 | Msa1361040 | 0.806760 | 7.032541e-50 | -8.615850e-47 |
| Msa0828350 | Msa1361040 | 0.815146 | 1.073545e-51 | -8.615850e-47 |
| Msa0127910 | Msa1361040 | -0.832970 | 6.974906e-56 | -8.615850e-47 |
| Msa0145430 | Msa1361040 | 0.821489 | 3.930302e-53 | -8.615850e-47 |
| Msa0146210 | Msa1361040 | 0.810869 | 9.299495e-51 | -8.615850e-47 |
| Msa0174060 | Msa1361040 | -0.831587 | 1.533616e-55 | -8.615850e-47 |
| Msa0177320 | Msa1361040 | 0.841469 | 4.663577e-58 | -8.615850e-47 |
| Msa0203880 | Msa1361040 | 0.806399 | 8.383730e-50 | -8.615850e-47 |
| Msa0216150 | Msa1361040 | -0.823804 | 1.137260e-53 | -8.615850e-47 |
| Msa0219860 | Msa1361040 | 0.804937 | 1.699430e-49 | -8.615850e-47 |
| Msa0223590 | Msa1361040 | 0.808987 | 2.363793e-50 | -8.615850e-47 |
| Msa0224210 | Msa1361040 | 0.832044 | 1.182997e-55 | -8.615850e-47 |
| Msa0225070 | Msa1361040 | -0.815017 | 1.146686e-51 | -8.615850e-47 |
| Msa0238140 | Msa1361040 | 0.835728 | 1.417351e-56 | -8.615850e-47 |
| Msa1228600 | Msa1361040 | -0.807940 | 3.954601e-50 | -8.615850e-47 |
| Msa1254910 | Msa1361040 | 0.809729 | 1.638235e-50 | -8.615850e-47 |
| Msa1284020 | Msa1361040 | 0.800297 | 1.539977e-48 | -8.615850e-47 |
| Msa1299200 | Msa1361040 | 0.838921 | 2.157667e-57 | -8.615850e-47 |
| Msa1299220 | Msa1361040 | 0.806945 | 6.427236e-50 | -8.615850e-47 |
| Msa1300370 | Msa1361040 | -0.804712 | 1.893873e-49 | -8.615850e-47 |
| Msa1304790 | Msa1361040 | 0.817063 | 4.005123e-52 | -8.615850e-47 |
| Msa1317740 | Msa1361040 | 0.807075 | 6.033832e-50 | -8.615850e-47 |
| Msa1326180 | Msa1361040 | 0.826660 | 2.401388e-54 | -8.615850e-47 |
| Msa1340440 | Msa1361040 | 0.817349 | 3.454065e-52 | -8.615850e-47 |
| Msa1342360 | Msa1361040 | -0.812353 | 4.425657e-51 | -8.615850e-47 |
| Msa0369990 | Msa1361040 | 0.813996 | 1.929087e-51 | -8.615850e-47 |
| Msa0386890 | Msa1361040 | 0.923603 | 2.135686e-89 | -8.615850e-47 |
| Msa0390590 | Msa1361040 | -0.833990 | 3.882644e-56 | -8.615850e-47 |
| Msa0390790 | Msa1361040 | 0.834179 | 3.480970e-56 | -8.615850e-47 |
| Msa0403740 | Msa1361040 | -0.815375 | 9.548431e-52 | -8.615850e-47 |
| Msa0413130 | Msa1361040 | 0.815462 | 9.133514e-52 | -8.615850e-47 |
| Msa0417400 | Msa1361040 | 0.800182 | 1.625169e-48 | -8.615850e-47 |
| Msa0429600 | Msa1361040 | 0.806984 | 6.306091e-50 | -8.615850e-47 |
| Msa0456450 | Msa1361040 | -0.813020 | 3.161815e-51 | -8.615850e-47 |
| Msa0457070 | Msa1361040 | -0.804024 | 2.634104e-49 | -8.615850e-47 |
| Msa0458220 | Msa1361040 | 0.839607 | 1.432015e-57 | -8.615850e-47 |
| Msa1014550 | Msa1361040 | -0.806532 | 7.859005e-50 | -8.615850e-47 |
| Msa1039150 | Msa1361040 | -0.806033 | 1.000883e-49 | -8.615850e-47 |
| Msa1041250 | Msa1361040 | 0.806451 | 8.172239e-50 | -8.615850e-47 |
| Msa1052000 | Msa1361040 | 0.809381 | 1.946642e-50 | -8.615850e-47 |
| Msa1055520 | Msa1361040 | -0.809492 | 1.842524e-50 | -8.615850e-47 |
| Msa1057940 | Msa1361040 | -0.814625 | 1.400604e-51 | -8.615850e-47 |
| Msa1078280 | Msa1361040 | -0.800345 | 1.505273e-48 | -8.615850e-47 |
| Msa1078590 | Msa1361040 | -0.810928 | 9.031818e-51 | -8.615850e-47 |
| Msa1078760 | Msa1361040 | -0.811267 | 7.627385e-51 | -8.615850e-47 |
| Msa1093190 | Msa1361040 | -0.816267 | 6.038426e-52 | -8.615850e-47 |
| Msa1104020 | Msa1361040 | -0.811795 | 5.853762e-51 | -8.615850e-47 |
| Msa0239560 | Msa1361040 | 0.806012 | 1.011248e-49 | -8.615850e-47 |
| Msa0242720 | Msa1361040 | 0.811433 | 7.018126e-51 | -8.615850e-47 |
| Msa0256540 | Msa1361040 | 0.824257 | 8.901084e-54 | -8.615850e-47 |
| Msa0264890 | Msa1361040 | 0.809345 | 1.981485e-50 | -8.615850e-47 |
| Msa0265480 | Msa1361040 | 0.802163 | 6.389799e-49 | -8.615850e-47 |
| Msa0285420 | Msa1361040 | 0.827412 | 1.586957e-54 | -8.615850e-47 |
| Msa0290800 | Msa1361040 | 0.813666 | 2.279918e-51 | -8.615850e-47 |
| Msa0294200 | Msa1361040 | 0.833544 | 5.018879e-56 | -8.615850e-47 |
| Msa0299340 | Msa1361040 | 0.824197 | 9.196240e-54 | -8.615850e-47 |
| Msa0303900 | Msa1361040 | 0.817324 | 3.498101e-52 | -8.615850e-47 |
| Msa0304350 | Msa1361040 | -0.800225 | 1.592770e-48 | -8.615850e-47 |
| Msa0307430 | Msa1361040 | 0.829638 | 4.602222e-55 | -8.615850e-47 |
| Msa0324220 | Msa1361040 | 0.829377 | 5.327703e-55 | -8.615850e-47 |
| Msa0328870 | Msa1361040 | 0.824646 | 7.210976e-54 | -8.615850e-47 |
| Msa0331070 | Msa1361040 | -0.802277 | 6.055976e-49 | -8.615850e-47 |
| Msa0333770 | Msa1361040 | 0.820589 | 6.333295e-53 | -8.615850e-47 |
| Msa0334320 | Msa1361040 | 0.807662 | 4.529521e-50 | -8.615850e-47 |
| Msa0336550 | Msa1361040 | -0.807219 | 5.625568e-50 | -8.615850e-47 |
| Msa0336680 | Msa1361040 | 0.809152 | 2.179519e-50 | -8.615850e-47 |
| Msa0340270 | Msa1361040 | 0.824028 | 1.007572e-53 | -8.615850e-47 |
| Msa0340370 | Msa1361040 | 0.818935 | 1.512040e-52 | -8.615850e-47 |
| Msa0340830 | Msa1361040 | -0.800401 | 1.466256e-48 | -8.615850e-47 |
| Msa0354600 | Msa1361040 | 0.805397 | 1.361810e-49 | -8.615850e-47 |
| Msa0364030 | Msa1361040 | -0.813773 | 2.159836e-51 | -8.615850e-47 |
| Msa1110900 | Msa1361040 | 0.800034 | 1.741655e-48 | -8.615850e-47 |
| Msa1121720 | Msa1361040 | -0.806995 | 6.274238e-50 | -8.615850e-47 |
| Msa1123440 | Msa1361040 | -0.800173 | 1.632115e-48 | -8.615850e-47 |
| Msa1129120 | Msa1361040 | -0.815175 | 1.057591e-51 | -8.615850e-47 |
| Msa1157200 | Msa1361040 | 0.831732 | 1.412730e-55 | -8.615850e-47 |
| Msa1169590 | Msa1361040 | -0.812578 | 3.951118e-51 | -8.615850e-47 |
| Msa1171510 | Msa1361040 | 0.812807 | 3.521276e-51 | -8.615850e-47 |
| Msa1173150 | Msa1361040 | 0.801275 | 9.724729e-49 | -8.615850e-47 |
| Msa1174280 | Msa1361040 | 0.807339 | 5.305225e-50 | -8.615850e-47 |
| Msa1177650 | Msa1361040 | 0.806708 | 7.214039e-50 | -8.615850e-47 |
| Msa1179340 | Msa1361040 | 0.817259 | 3.619064e-52 | -8.615850e-47 |
| Msa1181370 | Msa1361040 | -0.826463 | 2.675124e-54 | -8.615850e-47 |
| Msa1185270 | Msa1361040 | 0.800837 | 1.194848e-48 | -8.615850e-47 |
| Msa1191530 | Msa1361040 | -0.814337 | 1.622309e-51 | -8.615850e-47 |
| Msa1202470 | Msa1361040 | 0.818693 | 1.716198e-52 | -8.615850e-47 |
| Msa1213470 | Msa1361040 | -0.805051 | 1.609102e-49 | -8.615850e-47 |
| Msa0497860 | Msa1361040 | 0.802784 | 4.760462e-49 | -8.615850e-47 |
| Msa0501080 | Msa1361040 | 0.800235 | 1.585419e-48 | -8.615850e-47 |
| Msa0504700 | Msa1361040 | 0.832694 | 8.168560e-56 | -8.615850e-47 |
| Msa0524260 | Msa1361040 | 0.819256 | 1.277490e-52 | -8.615850e-47 |
| Msa0524370 | Msa1361040 | 0.807784 | 4.268500e-50 | -8.615850e-47 |
| Msa0526840 | Msa1361040 | -0.810971 | 8.837600e-51 | -8.615850e-47 |
| Msa0531050 | Msa1361040 | 0.817490 | 3.209812e-52 | -8.615850e-47 |
| Msa0537210 | Msa1361040 | 0.806236 | 9.071137e-50 | -8.615850e-47 |
| Msa0538050 | Msa1361040 | -0.824879 | 6.352964e-54 | -8.615850e-47 |
| Msa0545750 | Msa1361040 | -0.825059 | 5.760761e-54 | -8.615850e-47 |
| Msa0550980 | Msa1361040 | -0.802234 | 6.181023e-49 | -8.615850e-47 |
| Msa0563440 | Msa1361040 | 0.823801 | 1.138818e-53 | -8.615850e-47 |
| Msa0565180 | Msa1361040 | 0.808303 | 3.310022e-50 | -8.615850e-47 |
| Msa0567330 | Msa1361040 | 0.800308 | 1.531567e-48 | -8.615850e-47 |
| Msa0571900 | Msa1361040 | -0.806656 | 7.400598e-50 | -8.615850e-47 |
| Msa0576320 | Msa1361040 | 0.801342 | 9.421040e-49 | -8.615850e-47 |
| Msa0583270 | Msa1361040 | -0.805033 | 1.622432e-49 | -8.615850e-47 |
| Msa0584370 | Msa1361040 | 0.803069 | 4.155725e-49 | -8.615850e-47 |
| Msa0585720 | Msa1361040 | -0.806481 | 8.055096e-50 | -8.615850e-47 |
| Msa0593600 | Msa1361040 | 0.804559 | 2.038251e-49 | -8.615850e-47 |
| Msa0865810 | Msa1361040 | 0.806207 | 9.200454e-50 | -8.615850e-47 |
| Msa0870220 | Msa1361040 | -0.804713 | 1.893169e-49 | -8.615850e-47 |
| Msa0873880 | Msa1361040 | 0.825193 | 5.357680e-54 | -8.615850e-47 |
| Msa0873940 | Msa1361040 | 0.829380 | 5.317565e-55 | -8.615850e-47 |
| Msa0903460 | Msa1361040 | -0.809542 | 1.796911e-50 | -8.615850e-47 |
| Msa0906100 | Msa1361040 | -0.801370 | 9.298811e-49 | -8.615850e-47 |
| Msa0906680 | Msa1361040 | 0.803930 | 2.755589e-49 | -8.615850e-47 |
| Msa0914710 | Msa1361040 | 0.810178 | 1.311723e-50 | -8.615850e-47 |
| Msa0924690 | Msa1361040 | -0.824281 | 8.787549e-54 | -8.615850e-47 |
| Msa0931550 | Msa1361040 | -0.804477 | 2.119840e-49 | -8.615850e-47 |
| Msa0934290 | Msa1361040 | -0.812494 | 4.121169e-51 | -8.615850e-47 |
| Msa0935930 | Msa1361040 | -0.800419 | 1.453983e-48 | -8.615850e-47 |
| Msa0956600 | Msa1361040 | -0.801687 | 8.005519e-49 | -8.615850e-47 |
| Msa0963800 | Msa1361040 | -0.825941 | 3.561149e-54 | -8.615850e-47 |
| Msa0967900 | Msa1361040 | -0.804341 | 2.263586e-49 | -8.615850e-47 |
| Msa0971780 | Msa1361040 | -0.813514 | 2.462978e-51 | -8.615850e-47 |
| Msa0975950 | Msa1361040 | 0.818809 | 1.615143e-52 | -8.615850e-47 |
| Msa0975960 | Msa1361040 | 0.804138 | 2.494186e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361040 | MtrunA17_Chr3g0144891 | 97.794 | 544 | 12 | 0 | 1 | 544 | 19 | 562 | 0.0 | 1105 |
| Msa1361040 | MtrunA17_Chr4g0035361 | 71.983 | 464 | 118 | 7 | 79 | 536 | 1 | 458 | 0.0 | 653 |
| Msa1361040 | MtrunA17_Chr8g0372651 | 57.923 | 549 | 192 | 10 | 7 | 536 | 13 | 541 | 0.0 | 600 |
| Msa1361040 | MtrunA17_Chr4g0035391 | 53.436 | 582 | 197 | 12 | 23 | 545 | 48 | 614 | 0.0 | 561 |
| Msa1361040 | MtrunA17_Chr1g0155521 | 51.520 | 592 | 230 | 12 | 1 | 543 | 30 | 613 | 0.0 | 558 |
| Msa1361040 | MtrunA17_Chr3g0144911 | 63.391 | 407 | 139 | 5 | 1 | 398 | 29 | 434 | 0.0 | 530 |
| Msa1361040 | MtrunA17_Chr5g0404711 | 72.810 | 331 | 89 | 1 | 13 | 342 | 10 | 340 | 0.0 | 525 |
| Msa1361040 | MtrunA17_Chr5g0404711 | 48.193 | 83 | 42 | 1 | 463 | 544 | 388 | 470 | 4.19e-16 | 80.9 |
| Msa1361040 | MtrunA17_Chr3g0141821 | 48.962 | 578 | 236 | 10 | 2 | 543 | 13 | 567 | 2.94e-174 | 504 |
| Msa1361040 | MtrunA17_Chr7g0236461 | 40.949 | 569 | 263 | 10 | 20 | 543 | 39 | 579 | 3.28e-142 | 423 |
| Msa1361040 | MtrunA17_Chr3g0080051 | 39.833 | 600 | 295 | 14 | 1 | 543 | 20 | 610 | 8.07e-131 | 394 |
| Msa1361040 | MtrunA17_Chr4g0035381 | 59.044 | 293 | 111 | 2 | 51 | 336 | 49 | 339 | 4.83e-126 | 374 |
| Msa1361040 | MtrunA17_Chr8g0369291 | 38.272 | 567 | 303 | 11 | 19 | 543 | 33 | 594 | 4.89e-117 | 358 |
| Msa1361040 | MtrunA17_Chr5g0399151 | 51.815 | 303 | 144 | 1 | 16 | 318 | 54 | 354 | 5.74e-111 | 338 |
| Msa1361040 | MtrunA17_Chr3g0131581 | 31.984 | 247 | 147 | 9 | 44 | 289 | 36 | 262 | 7.45e-21 | 92.8 |
| Msa1361040 | MtrunA17_Chr4g0076441 | 30.622 | 209 | 137 | 3 | 80 | 286 | 34 | 236 | 3.39e-20 | 92.0 |
| Msa1361040 | MtrunA17_Chr2g0290661 | 30.516 | 213 | 132 | 4 | 80 | 286 | 39 | 241 | 5.42e-20 | 91.3 |
| Msa1361040 | MtrunA17_Chr3g0102691 | 30.144 | 209 | 139 | 3 | 79 | 286 | 33 | 235 | 3.10e-19 | 89.4 |
| Msa1361040 | MtrunA17_Chr8g0385691 | 33.790 | 219 | 126 | 5 | 72 | 289 | 42 | 242 | 3.63e-19 | 87.4 |
| Msa1361040 | MtrunA17_Chr3g0144901 | 34.021 | 194 | 98 | 7 | 371 | 543 | 4 | 188 | 9.24e-19 | 84.7 |
| Msa1361040 | MtrunA17_Chr8g0385681 | 32.420 | 219 | 129 | 7 | 72 | 289 | 45 | 245 | 4.43e-18 | 84.3 |
| Msa1361040 | MtrunA17_Chr4g0004981 | 29.204 | 226 | 137 | 8 | 79 | 295 | 125 | 336 | 3.55e-17 | 84.3 |
| Msa1361040 | MtrunA17_Chr8g0385291 | 27.064 | 218 | 140 | 6 | 79 | 289 | 181 | 386 | 1.04e-14 | 76.6 |
| Msa1361040 | MtrunA17_Chr1g0161441 | 29.224 | 219 | 135 | 9 | 74 | 289 | 27 | 228 | 3.82e-13 | 69.7 |
| Msa1361040 | MtrunA17_Chr3g0131071 | 29.333 | 225 | 128 | 11 | 79 | 289 | 249 | 456 | 1.09e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361040 | AT2G21540.6 | 63.722 | 532 | 165 | 6 | 4 | 529 | 20 | 529 | 0.0 | 695 |
| Msa1361040 | AT2G21540.2 | 63.722 | 532 | 165 | 6 | 4 | 529 | 20 | 529 | 0.0 | 695 |
| Msa1361040 | AT2G21540.1 | 63.722 | 532 | 165 | 6 | 4 | 529 | 20 | 529 | 0.0 | 695 |
| Msa1361040 | AT2G21540.4 | 63.722 | 532 | 165 | 6 | 4 | 529 | 20 | 529 | 0.0 | 695 |
| Msa1361040 | AT2G21540.3 | 63.636 | 528 | 166 | 4 | 4 | 529 | 20 | 523 | 0.0 | 691 |
| Msa1361040 | AT2G21540.5 | 63.636 | 528 | 166 | 4 | 4 | 529 | 20 | 523 | 0.0 | 691 |
| Msa1361040 | AT4G39180.3 | 59.116 | 543 | 198 | 8 | 1 | 537 | 17 | 541 | 0.0 | 649 |
| Msa1361040 | AT4G39180.2 | 59.116 | 543 | 198 | 8 | 1 | 537 | 17 | 541 | 0.0 | 649 |
| Msa1361040 | AT4G39180.1 | 58.932 | 543 | 200 | 8 | 1 | 537 | 17 | 542 | 0.0 | 647 |
| Msa1361040 | AT4G36490.1 | 61.651 | 545 | 174 | 13 | 7 | 537 | 8 | 531 | 0.0 | 647 |
| Msa1361040 | AT4G34580.2 | 60.545 | 550 | 189 | 12 | 1 | 537 | 8 | 542 | 0.0 | 644 |
| Msa1361040 | AT4G34580.1 | 60.545 | 550 | 189 | 12 | 1 | 537 | 8 | 542 | 0.0 | 644 |
| Msa1361040 | AT2G18180.1 | 59.707 | 546 | 182 | 12 | 8 | 538 | 13 | 535 | 0.0 | 631 |
| Msa1361040 | AT2G18180.2 | 59.707 | 546 | 182 | 12 | 8 | 538 | 13 | 535 | 0.0 | 630 |
| Msa1361040 | AT4G39170.1 | 53.638 | 591 | 220 | 12 | 1 | 545 | 29 | 611 | 0.0 | 590 |
| Msa1361040 | AT4G39170.2 | 53.559 | 590 | 220 | 13 | 1 | 545 | 29 | 609 | 0.0 | 585 |
| Msa1361040 | AT2G16380.2 | 54.189 | 561 | 216 | 10 | 1 | 545 | 8 | 543 | 0.0 | 581 |
| Msa1361040 | AT2G16380.1 | 54.189 | 561 | 216 | 10 | 1 | 545 | 8 | 543 | 0.0 | 581 |
| Msa1361040 | AT2G21520.2 | 51.952 | 589 | 234 | 13 | 1 | 541 | 33 | 620 | 0.0 | 579 |
| Msa1361040 | AT2G21520.3 | 51.952 | 589 | 234 | 13 | 1 | 541 | 33 | 620 | 0.0 | 579 |
| Msa1361040 | AT2G21520.1 | 51.952 | 589 | 234 | 13 | 1 | 541 | 29 | 616 | 0.0 | 578 |
| Msa1361040 | AT2G18180.4 | 60.208 | 480 | 158 | 9 | 80 | 545 | 11 | 471 | 0.0 | 562 |
| Msa1361040 | AT2G18180.3 | 60.208 | 480 | 158 | 9 | 80 | 545 | 11 | 471 | 0.0 | 561 |
| Msa1361040 | AT2G18180.5 | 60.043 | 463 | 152 | 9 | 97 | 545 | 1 | 444 | 0.0 | 536 |
| Msa1361040 | AT1G19650.1 | 48.370 | 583 | 253 | 11 | 1 | 543 | 26 | 600 | 2.04e-174 | 506 |
| Msa1361040 | AT2G16380.3 | 54.212 | 463 | 173 | 8 | 97 | 545 | 1 | 438 | 4.40e-166 | 479 |
| Msa1361040 | AT1G75370.1 | 50.000 | 594 | 236 | 15 | 1 | 545 | 29 | 610 | 7.28e-165 | 482 |
| Msa1361040 | AT1G75370.2 | 49.744 | 587 | 239 | 14 | 1 | 543 | 29 | 603 | 7.64e-164 | 481 |
| Msa1361040 | AT1G19650.3 | 68.438 | 320 | 99 | 2 | 1 | 319 | 26 | 344 | 8.91e-160 | 462 |
| Msa1361040 | AT3G24840.1 | 46.112 | 553 | 252 | 11 | 1 | 532 | 22 | 549 | 9.44e-159 | 465 |
| Msa1361040 | AT3G24840.6 | 46.112 | 553 | 252 | 11 | 1 | 532 | 22 | 549 | 9.44e-159 | 465 |
| Msa1361040 | AT3G24840.4 | 46.112 | 553 | 252 | 11 | 1 | 532 | 22 | 549 | 9.44e-159 | 465 |
| Msa1361040 | AT3G24840.2 | 46.112 | 553 | 252 | 11 | 1 | 532 | 22 | 549 | 9.44e-159 | 465 |
| Msa1361040 | AT3G24840.7 | 46.209 | 554 | 251 | 10 | 1 | 532 | 22 | 550 | 1.77e-158 | 464 |
| Msa1361040 | AT3G24840.3 | 46.209 | 554 | 251 | 10 | 1 | 532 | 22 | 550 | 1.77e-158 | 464 |
| Msa1361040 | AT3G24840.5 | 46.209 | 554 | 251 | 10 | 1 | 532 | 22 | 550 | 1.77e-158 | 464 |
| Msa1361040 | AT1G19650.2 | 47.913 | 503 | 216 | 9 | 80 | 543 | 33 | 528 | 4.99e-152 | 446 |
| Msa1361040 | AT5G56160.1 | 39.016 | 569 | 303 | 16 | 5 | 544 | 19 | 572 | 4.73e-129 | 389 |
| Msa1361040 | AT5G56160.3 | 39.016 | 569 | 303 | 16 | 5 | 544 | 19 | 572 | 4.73e-129 | 389 |
| Msa1361040 | AT1G55690.3 | 38.526 | 597 | 291 | 12 | 1 | 532 | 20 | 605 | 8.78e-125 | 379 |
| Msa1361040 | AT1G55690.2 | 38.526 | 597 | 291 | 12 | 1 | 532 | 20 | 605 | 9.75e-125 | 379 |
| Msa1361040 | AT1G55690.4 | 38.526 | 597 | 291 | 12 | 1 | 532 | 20 | 605 | 9.75e-125 | 379 |
| Msa1361040 | AT1G55690.1 | 38.526 | 597 | 291 | 12 | 1 | 532 | 20 | 605 | 9.75e-125 | 379 |
| Msa1361040 | AT1G55690.5 | 38.526 | 597 | 291 | 12 | 1 | 532 | 20 | 605 | 9.75e-125 | 379 |
| Msa1361040 | AT5G56160.2 | 52.848 | 316 | 147 | 2 | 5 | 318 | 19 | 334 | 4.12e-121 | 365 |
| Msa1361040 | AT5G47510.2 | 51.685 | 267 | 127 | 1 | 46 | 312 | 20 | 284 | 1.26e-103 | 315 |
| Msa1361040 | AT5G47510.4 | 51.685 | 267 | 127 | 1 | 46 | 312 | 20 | 284 | 3.05e-103 | 316 |
| Msa1361040 | AT5G47510.1 | 51.685 | 267 | 127 | 1 | 46 | 312 | 19 | 283 | 3.43e-103 | 315 |
| Msa1361040 | AT5G47510.3 | 53.097 | 226 | 106 | 0 | 87 | 312 | 2 | 227 | 2.73e-93 | 288 |
| Msa1361040 | AT5G47730.4 | 28.631 | 241 | 157 | 5 | 55 | 286 | 7 | 241 | 4.07e-21 | 95.1 |
| Msa1361040 | AT5G47730.1 | 28.631 | 241 | 157 | 5 | 55 | 286 | 7 | 241 | 4.07e-21 | 95.1 |
| Msa1361040 | AT1G55840.2 | 28.708 | 209 | 141 | 3 | 80 | 286 | 12 | 214 | 4.78e-18 | 85.5 |
| Msa1361040 | AT1G55840.1 | 28.708 | 209 | 141 | 3 | 80 | 286 | 39 | 241 | 7.60e-18 | 85.1 |
| Msa1361040 | AT5G47730.2 | 29.167 | 192 | 128 | 3 | 97 | 286 | 1 | 186 | 1.70e-16 | 80.5 |
| Msa1361040 | AT5G47730.3 | 29.167 | 192 | 128 | 3 | 97 | 286 | 1 | 186 | 1.70e-16 | 80.5 |
| Msa1361040 | AT1G72160.1 | 27.193 | 228 | 139 | 7 | 79 | 293 | 166 | 379 | 4.27e-16 | 81.6 |
| Msa1361040 | AT1G01630.1 | 30.137 | 219 | 134 | 5 | 72 | 289 | 45 | 245 | 5.33e-16 | 78.6 |
| Msa1361040 | AT1G75170.2 | 30.841 | 214 | 120 | 9 | 82 | 289 | 49 | 240 | 2.78e-13 | 71.2 |
| Msa1361040 | AT1G75170.1 | 30.841 | 214 | 120 | 9 | 82 | 289 | 49 | 240 | 2.78e-13 | 71.2 |
| Msa1361040 | AT3G51670.1 | 26.695 | 236 | 145 | 9 | 79 | 306 | 84 | 299 | 3.54e-12 | 68.9 |
| Msa1361040 | AT4G09160.3 | 24.779 | 226 | 147 | 8 | 79 | 293 | 316 | 529 | 1.35e-11 | 67.8 |
| Msa1361040 | AT4G09160.2 | 24.779 | 226 | 147 | 8 | 79 | 293 | 316 | 529 | 1.46e-11 | 67.8 |
| Msa1361040 | AT4G09160.1 | 24.779 | 226 | 147 | 8 | 79 | 293 | 341 | 554 | 1.48e-11 | 67.8 |
| Msa1361040 | AT4G36640.1 | 28.311 | 219 | 131 | 9 | 80 | 293 | 44 | 241 | 6.45e-11 | 63.9 |
| Msa1361040 | AT4G36640.3 | 28.311 | 219 | 131 | 9 | 80 | 293 | 44 | 241 | 6.45e-11 | 63.9 |
Find 112 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAAAGCACAACTATTT+TGG | 0.160946 | tig0017331:+24958 | Msa1361040:CDS |
| TCAATGCTGGTTCTGGATTT+AGG | 0.204254 | tig0017331:+25751 | Msa1361040:CDS |
| ACAATTTGTTGGTGGAATTA+TGG | 0.206593 | tig0017331:+27153 | Msa1361040:CDS |
| ATCACAGAAGCAGCACTTTA+TGG | 0.247624 | tig0017331:+27232 | Msa1361040:CDS |
| CTTAAGTGGAGGAAGGAATT+TGG | 0.250834 | tig0017331:+24538 | Msa1361040:CDS |
| AAAACTTACACCATAGGATT+TGG | 0.251608 | tig0017331:-26476 | None:intergenic |
| TTCATCATCAATGCTGGTTC+TGG | 0.265601 | tig0017331:+25744 | Msa1361040:CDS |
| CTTGACCGACCTGTCAAAAT+TGG | 0.280566 | tig0017331:+22995 | Msa1361040:five_prime_UTR |
| GACACTTGATGTTCATTGTT+TGG | 0.296140 | tig0017331:+26447 | Msa1361040:CDS |
| TTGAGGTGGTCTTGGGATCT+AGG | 0.297103 | tig0017331:-25800 | None:intergenic |
| TACTCATTGTTTGAAATTGC+AGG | 0.299234 | tig0017331:-27295 | None:intergenic |
| TGGAATTATGGCACTTGTTA+TGG | 0.309546 | tig0017331:+27165 | Msa1361040:CDS |
| CAGTGAACTTCCAGAGTTCT+TGG | 0.325219 | tig0017331:+26128 | Msa1361040:intron |
| ACCTGTTTACATTGAAAGAT+TGG | 0.335171 | tig0017331:+24805 | Msa1361040:CDS |
| GCTACTTGTCATGCGAATTA+TGG | 0.337136 | tig0017331:-27197 | None:intergenic |
| GATTGTTACTCCAACAATAA+TGG | 0.338457 | tig0017331:+27106 | Msa1361040:intron |
| AACAATAATGGAATGAATTC+TGG | 0.350361 | tig0017331:+27118 | Msa1361040:CDS |
| CAAGTTCTACTTGTCGAGTA+AGG | 0.352182 | tig0017331:-27873 | None:intergenic |
| AATTTCAAACAATGAGTATA+TGG | 0.354504 | tig0017331:+27300 | Msa1361040:CDS |
| CCCAATCTTTCAATGTAAAC+AGG | 0.377140 | tig0017331:-24806 | None:intergenic |
| TACACAATAAAAGCTTTATC+CGG | 0.383318 | tig0017331:+26355 | Msa1361040:CDS |
| AAACTTACACCATAGGATTT+GGG | 0.384470 | tig0017331:-26475 | None:intergenic |
| CAATGAACATCAAGTGTCTC+TGG | 0.400837 | tig0017331:-26442 | None:intergenic |
| TGATGATGAACATACGGTTC+AGG | 0.404329 | tig0017331:-25731 | None:intergenic |
| AGAATTCATTCCATTATTGT+TGG | 0.414930 | tig0017331:-27116 | None:intergenic |
| ATGAATTAGATGGCTCAAAA+TGG | 0.425006 | tig0017331:+26322 | Msa1361040:intron |
| GGAATTATGGCACTTGTTAT+GGG | 0.425311 | tig0017331:+27166 | Msa1361040:CDS |
| ACTTGTACTTGTGCTGATAA+AGG | 0.426503 | tig0017331:+26156 | Msa1361040:CDS |
| AGAGTTGGGTAAAACCAAAA+AGG | 0.426776 | tig0017331:+27447 | Msa1361040:CDS |
| CCTGTTTACATTGAAAGATT+GGG | 0.431538 | tig0017331:+24806 | Msa1361040:CDS |
| AAAACTACCTTCAAGATCTC+TGG | 0.441339 | tig0017331:-26216 | None:intergenic |
| CATCCAAAATAGTTGTGCTT+TGG | 0.441578 | tig0017331:-24961 | None:intergenic |
| GTTCTGGATTTAGGCTATTG+TGG | 0.444798 | tig0017331:+25760 | Msa1361040:CDS |
| CAGAGGCTTCAGAAGATTGA+TGG | 0.450399 | tig0017331:+25322 | Msa1361040:CDS |
| ACAAAGCAGTTGATTCTTCG+TGG | 0.451912 | tig0017331:+26716 | Msa1361040:CDS |
| CATCAATCTTCTGAAGCCTC+TGG | 0.457843 | tig0017331:-25321 | None:intergenic |
| CAGTACTCTTGAACAAGAGT+TGG | 0.468782 | tig0017331:+27432 | Msa1361040:CDS |
| CTAATTGGACTTTAGGCACT+AGG | 0.474315 | tig0017331:+27844 | Msa1361040:intron |
| TGATTCATTGACCAGGTCCT+AGG | 0.474555 | tig0017331:+25910 | Msa1361040:intron |
| TACTATCCACAAGGACATCA+TGG | 0.474884 | tig0017331:+24764 | Msa1361040:CDS |
| AAAAGCTTTATCCGGGGTTG+AGG | 0.482536 | tig0017331:+26363 | Msa1361040:CDS |
| TGCTTGAAGTCATTGATGCC+AGG | 0.484512 | tig0017331:+25953 | Msa1361040:CDS |
| TCAACTGCTTTGTCAAGTAC+TGG | 0.487930 | tig0017331:-26706 | None:intergenic |
| TTTGCTGCAATTGAACATGC+AGG | 0.488698 | tig0017331:-24926 | None:intergenic |
| AGGACATCATGGAGTTGATA+AGG | 0.489174 | tig0017331:+24775 | Msa1361040:CDS |
| AGTGAACTTCCAGAGTTCTT+GGG | 0.490368 | tig0017331:+26129 | Msa1361040:intron |
| TGACTTCAAGCAACTTGCTC+TGG | 0.490990 | tig0017331:-25942 | None:intergenic |
| TGCTATCTGACAAGGGTCCA+TGG | 0.491415 | tig0017331:+26187 | Msa1361040:CDS |
| ACTCGACAAGTAGAACTTGA+AGG | 0.493504 | tig0017331:+27877 | Msa1361040:CDS |
| ATGAGGATCATCATGCTTTG+AGG | 0.497087 | tig0017331:-23634 | None:intergenic |
| ACACAATAAAAGCTTTATCC+GGG | 0.498005 | tig0017331:+26356 | Msa1361040:CDS |
| GATGATGAACATACGGTTCA+GGG | 0.502765 | tig0017331:-25730 | None:intergenic |
| GGATTTAGCAAACAATTTGT+TGG | 0.503430 | tig0017331:+27142 | Msa1361040:CDS |
| TGCTCTGGTATTTGTTACCT+AGG | 0.510194 | tig0017331:-25927 | None:intergenic |
| TTGGATCAACCCAAATCCTA+TGG | 0.511616 | tig0017331:+26466 | Msa1361040:CDS |
| AATTGCAGGTGCTTTCATCA+TGG | 0.511679 | tig0017331:-27281 | None:intergenic |
| ATTTGGTGCTGACACTATCA+TGG | 0.514322 | tig0017331:+24555 | Msa1361040:CDS |
| TTTCCTAAAACTTACACCAT+AGG | 0.515333 | tig0017331:-26482 | None:intergenic |
| TTTAGCAAACAATTTGTTGG+TGG | 0.520699 | tig0017331:+27145 | Msa1361040:CDS |
| ACAGGTCGGTCAAGAGGTGC+GGG | 0.532165 | tig0017331:-22986 | None:intergenic |
| CAAGTACCACCCAAGAACTC+TGG | 0.533812 | tig0017331:-26138 | None:intergenic |
| TGCTTAATAATGCTCTAACC+AGG | 0.535342 | tig0017331:+27407 | Msa1361040:CDS |
| CCCTCTCAAACTCTCGTACA+TGG | 0.536103 | tig0017331:-24886 | None:intergenic |
| AGTACTCTTGAACAAGAGTT+GGG | 0.538546 | tig0017331:+27433 | Msa1361040:CDS |
| TGAGGATCATCATGCTTTGA+GGG | 0.539591 | tig0017331:-23633 | None:intergenic |
| TGTGGACAGATATGCTTAAG+TGG | 0.542108 | tig0017331:+24524 | Msa1361040:CDS |
| AAGATCTCTGGATCATTCCA+TGG | 0.542169 | tig0017331:-26204 | None:intergenic |
| TTCAGCCATGCGCTTCATCA+TGG | 0.544493 | tig0017331:-27323 | None:intergenic |
| TGTTACCTTAGCATCATATG+AGG | 0.545245 | tig0017331:-23651 | None:intergenic |
| AAGTTCTACTTGTCGAGTAA+GGG | 0.546049 | tig0017331:-27872 | None:intergenic |
| CGTATGTTCATCATCAATGC+TGG | 0.547791 | tig0017331:+25738 | Msa1361040:CDS |
| GACAAATACGTGCTTTCGAA+AGG | 0.549204 | tig0017331:+26757 | Msa1361040:CDS |
| GACAGGTCGGTCAAGAGGTG+CGG | 0.549720 | tig0017331:-22987 | None:intergenic |
| AAGGGTTGGGTCTATAAAGA+AGG | 0.550214 | tig0017331:+23452 | Msa1361040:CDS |
| TTTGTCAAGTACTGGAACAA+AGG | 0.552073 | tig0017331:-26698 | None:intergenic |
| ATGATCCTCATATGATGCTA+AGG | 0.554588 | tig0017331:+23646 | Msa1361040:CDS |
| AGAAGAAACTGCATATCAGA+AGG | 0.555317 | tig0017331:+26402 | Msa1361040:CDS |
| AGTTATGTCTATCTGTATTG+AGG | 0.566228 | tig0017331:+23539 | Msa1361040:CDS |
| CATCATGGAGTTGATAAGGA+TGG | 0.566925 | tig0017331:+24779 | Msa1361040:CDS |
| AAGTATGAACAAAGCTGCAA+GGG | 0.567227 | tig0017331:+25291 | Msa1361040:CDS |
| CAGCATTGATGATGAACATA+CGG | 0.574837 | tig0017331:-25737 | None:intergenic |
| GAATGATCCAGAGATCTTGA+AGG | 0.575374 | tig0017331:+26209 | Msa1361040:CDS |
| GAAGTATGAACAAAGCTGCA+AGG | 0.578601 | tig0017331:+25290 | Msa1361040:CDS |
| TAGATGGCTCAAAATGGTGT+TGG | 0.582857 | tig0017331:+26328 | Msa1361040:intron |
| TCATGAGATGGAACATTCTG+AGG | 0.585895 | tig0017331:+23416 | Msa1361040:exon |
| GGCAACTCAGTGTATTATGA+TGG | 0.587600 | tig0017331:+27256 | Msa1361040:CDS |
| TGTAAACAAAGGTCATGAGA+TGG | 0.590589 | tig0017331:+23404 | Msa1361040:intron |
| TCAACTCCATGATGTCCTTG+TGG | 0.593727 | tig0017331:-24770 | None:intergenic |
| GCTTAATAATGCTCTAACCA+GGG | 0.597448 | tig0017331:+27408 | Msa1361040:CDS |
| AATAATGGAATGAATTCTGG+TGG | 0.608682 | tig0017331:+27121 | Msa1361040:CDS |
| CAATCTTCTGAAGCCTCTGG+AGG | 0.609585 | tig0017331:-25318 | None:intergenic |
| ACCATGTACGAGAGTTTGAG+AGG | 0.609926 | tig0017331:+24885 | Msa1361040:CDS |
| TAGAGAAAACAAAACAAATG+TGG | 0.610144 | tig0017331:+24506 | Msa1361040:CDS |
| CACAATAAAAGCTTTATCCG+GGG | 0.611558 | tig0017331:+26357 | Msa1361040:CDS |
| AGATATGCTTAAGTGGAGGA+AGG | 0.618590 | tig0017331:+24531 | Msa1361040:CDS |
| GAAGAAACTGCATATCAGAA+GGG | 0.622435 | tig0017331:+26403 | Msa1361040:CDS |
| TGGATGCATGCTATCTGACA+AGG | 0.622907 | tig0017331:+26179 | Msa1361040:CDS |
| CTGCAAGGGATCTCCTCCAG+AGG | 0.649316 | tig0017331:+25305 | Msa1361040:CDS |
| TGTACTTGTGCTGATAAAGG+TGG | 0.649664 | tig0017331:+26159 | Msa1361040:CDS |
| GCATGACAAGTAGCATGCCA+AGG | 0.652880 | tig0017331:+27206 | Msa1361040:CDS |
| GAACTTCCAGAGTTCTTGGG+TGG | 0.657539 | tig0017331:+26132 | Msa1361040:CDS |
| GGTTGGGTCTATAAAGAAGG+TGG | 0.673399 | tig0017331:+23455 | Msa1361040:CDS |
| CCATGTACGAGAGTTTGAGA+GGG | 0.676404 | tig0017331:+24886 | Msa1361040:CDS |
| GTTGTTGCAAGTAACATCAG+TGG | 0.679229 | tig0017331:+24847 | Msa1361040:CDS |
| ACAGAAGCAGCACTTTATGG+TGG | 0.688016 | tig0017331:+27235 | Msa1361040:CDS |
| TTGTTCAAGAGTACTGACCC+TGG | 0.690391 | tig0017331:-27425 | None:intergenic |
| GGACAGATATGCTTAAGTGG+AGG | 0.704066 | tig0017331:+24527 | Msa1361040:CDS |
| GTTCTAAAATACTATCCACA+AGG | 0.704171 | tig0017331:+24755 | Msa1361040:CDS |
| GGATGCATGCTATCTGACAA+GGG | 0.704740 | tig0017331:+26180 | Msa1361040:CDS |
| TGATGGTGACAACTATCCTG+AGG | 0.705159 | tig0017331:+25339 | Msa1361040:CDS |
| TATGGCCATGATGAAGCGCA+TGG | 0.713241 | tig0017331:+27318 | Msa1361040:CDS |
| TGGTGCTGACACTATCATGG+AGG | 0.730519 | tig0017331:+24558 | Msa1361040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTATTTTATTTTTT+TGG | - | tig0017331:23350-23369 | None:intergenic | 0.0% |
| !!! | ATTTTTTATTTATTTTTTTT+AGG | + | tig0017331:24614-24633 | Msa1361040:intron | 0.0% |
| !!! | TTTTTTATTTATTTTTTTTA+GGG | + | tig0017331:24615-24634 | Msa1361040:intron | 0.0% |
| !!! | TTTTTATTTATTTTTAATAA+TGG | - | tig0017331:27072-27091 | None:intergenic | 0.0% |
| !!! | ATGATTTATTTATTTTTCAT+TGG | - | tig0017331:24590-24609 | None:intergenic | 10.0% |
| !! | TTTATTACAAGTTATTATTA+CGG | + | tig0017331:25186-25205 | Msa1361040:intron | 10.0% |
| !!! | AAAAATCAATGAATTTTATA+AGG | - | tig0017331:26047-26066 | None:intergenic | 10.0% |
| !!! | TTCTATGTTATTTATTGATA+AGG | + | tig0017331:23312-23331 | Msa1361040:intron | 15.0% |
| !! | TTATTTATTGATAAGGTAAA+AGG | + | tig0017331:23319-23338 | Msa1361040:intron | 15.0% |
| !!! | TTTTTTTATCAATTGATGTT+TGG | - | tig0017331:24140-24159 | None:intergenic | 15.0% |
| !!! | TGATTTTGTAAAATAGATTT+TGG | - | tig0017331:24291-24310 | None:intergenic | 15.0% |
| !!! | AAATAGTTTTTTCTTCTAAT+TGG | - | tig0017331:25054-25073 | None:intergenic | 15.0% |
| !! | TTAAAAATATTATGTCACAA+AGG | - | tig0017331:26262-26281 | None:intergenic | 15.0% |
| !!! | AAATTTAAGATAAACAAACA+AGG | - | tig0017331:26515-26534 | None:intergenic | 15.0% |
| !! | TTTCATTAACTAATGAAATT+TGG | - | tig0017331:26604-26623 | None:intergenic | 15.0% |
| !!! | AACACACAATATTTTAAAAA+AGG | - | tig0017331:26658-26677 | None:intergenic | 15.0% |
| !! | AGCTTATAAGTATATAAAAA+TGG | - | tig0017331:26890-26909 | None:intergenic | 15.0% |
| !!! | ATTGCTTCTTTATTTTATTT+TGG | + | tig0017331:27477-27496 | Msa1361040:intron | 15.0% |
| !!! | TTGCTTCTTTATTTTATTTT+GGG | + | tig0017331:27478-27497 | Msa1361040:intron | 15.0% |
| !! | TAATCATGAACTATTCTATA+TGG | + | tig0017331:23108-23127 | Msa1361040:intron | 20.0% |
| !! | TGAAATGTTAATGTTATGAT+TGG | + | tig0017331:23155-23174 | Msa1361040:intron | 20.0% |
| !!! | TTTCTTTTTCTTGTAAACAA+AGG | + | tig0017331:23393-23412 | Msa1361040:intron | 20.0% |
| !! | AAAAATTCATTCACCAAAAA+GGG | + | tig0017331:23501-23520 | Msa1361040:CDS | 20.0% |
| !! | CAAACTTGAATCAATTATAA+AGG | - | tig0017331:23755-23774 | None:intergenic | 20.0% |
| !! | GAATCAATTCTCAAATTTAT+TGG | + | tig0017331:23826-23845 | Msa1361040:intron | 20.0% |
| !!! | GATATAATTGATTTTGAAAC+TGG | - | tig0017331:24051-24070 | None:intergenic | 20.0% |
| !!! | AAATCGATTCTCAAATTTAT+TGG | + | tig0017331:24104-24123 | Msa1361040:intron | 20.0% |
| !!! | TTTTGGTTTAAATCAAATCA+AGG | - | tig0017331:24274-24293 | None:intergenic | 20.0% |
| !!! | ATTTGATTTCAATGGTATAA+TGG | + | tig0017331:24428-24447 | Msa1361040:intron | 20.0% |
| !! | TTTATGGTAACTATCATTTA+AGG | - | tig0017331:25082-25101 | None:intergenic | 20.0% |
| !! | TTCTAATTGTTATGTTCATA+TGG | + | tig0017331:25215-25234 | Msa1361040:intron | 20.0% |
| !! | AATTTACTAATTAGCATGAT+TGG | + | tig0017331:25253-25272 | Msa1361040:intron | 20.0% |
| !! | ATAGTTAGTTAATGAATATC+AGG | + | tig0017331:25450-25469 | Msa1361040:intron | 20.0% |
| !! | TTAACACCTAATAAAAACTA+TGG | + | tig0017331:25566-25585 | Msa1361040:intron | 20.0% |
| !! | TAAAGCAAAGAAAAACAATA+AGG | + | tig0017331:26282-26301 | Msa1361040:intron | 20.0% |
| !! | ATAAGGTAATTATATTTCCT+TGG | + | tig0017331:26299-26318 | Msa1361040:intron | 20.0% |
| !!! | TATTTTAAAAAAGGTAGCAA+TGG | - | tig0017331:26649-26668 | None:intergenic | 20.0% |
| !! | AATTTCAAACAATGAGTATA+TGG | + | tig0017331:27300-27319 | Msa1361040:CDS | 20.0% |
| !!! | TAGCTTTTGCAAAATAAAAT+TGG | + | tig0017331:27661-27680 | Msa1361040:intron | 20.0% |
| !!! | TTTTGCAAAATAAAATTGGT+TGG | + | tig0017331:27665-27684 | Msa1361040:intron | 20.0% |
| !!! | TTTGTTTTGTACTAGCTAAA+AGG | + | tig0017331:23132-23151 | Msa1361040:intron | 25.0% |
| ! | TGCCTATTATAAAAATGTAC+AGG | + | tig0017331:23263-23282 | Msa1361040:intron | 25.0% |
| ! | GCCTATTATAAAAATGTACA+GGG | + | tig0017331:23264-23283 | Msa1361040:intron | 25.0% |
| !! | TCCCTGTACATTTTTATAAT+AGG | - | tig0017331:23268-23287 | None:intergenic | 25.0% |
| ! | TTTATTGATAAGGTAAAAGG+TGG | + | tig0017331:23322-23341 | Msa1361040:intron | 25.0% |
| ! | TGAGGATGAAAAAAAGAAAA+GGG | + | tig0017331:23434-23453 | Msa1361040:CDS | 25.0% |
| ! | ATGAAAAAAAGAAAAGGGTT+GGG | + | tig0017331:23439-23458 | Msa1361040:CDS | 25.0% |
| ! | CAAAAATTCATTCACCAAAA+AGG | + | tig0017331:23500-23519 | Msa1361040:CDS | 25.0% |
| ! | AAAATTCATTCACCAAAAAG+GGG | + | tig0017331:23502-23521 | Msa1361040:CDS | 25.0% |
| ! | TTTATGTCTGAATAGTAGTT+TGG | - | tig0017331:23882-23901 | None:intergenic | 25.0% |
| ! | AAGCCAAACATAACAATTTA+CGG | - | tig0017331:24010-24029 | None:intergenic | 25.0% |
| !! | ATACCTTGATTTGATTTCAA+TGG | + | tig0017331:24420-24439 | Msa1361040:intron | 25.0% |
| ! | ATACCATTGAAATCAAATCA+AGG | - | tig0017331:24426-24445 | None:intergenic | 25.0% |
| ! | TAGAGAAAACAAAACAAATG+TGG | + | tig0017331:24506-24525 | Msa1361040:CDS | 25.0% |
| !!! | GCTTGTTTTGTTTTTCTATA+AGG | + | tig0017331:24706-24725 | Msa1361040:intron | 25.0% |
| ! | CTTCTAATTGGTTATTCTTT+AGG | - | tig0017331:25042-25061 | None:intergenic | 25.0% |
| ! | TACCATAAATCTAACCAAAT+TGG | + | tig0017331:25093-25112 | Msa1361040:intron | 25.0% |
| ! | ATCCAATTTGGTTAGATTTA+TGG | - | tig0017331:25098-25117 | None:intergenic | 25.0% |
| ! | AATAAACATTATTGCCTTGT+TGG | - | tig0017331:25172-25191 | None:intergenic | 25.0% |
| !! | AATTAGCATGATTGGTAATT+AGG | + | tig0017331:25261-25280 | Msa1361040:intron | 25.0% |
| !! | ATTAGCATGATTGGTAATTA+GGG | + | tig0017331:25262-25281 | Msa1361040:intron | 25.0% |
| ! | ATTTGAACACATGATAATTG+TGG | - | tig0017331:25535-25554 | None:intergenic | 25.0% |
| !! | AGTCAACCATAGTTTTTATT+AGG | - | tig0017331:25575-25594 | None:intergenic | 25.0% |
| ! | ACTTTCATGAAAACGTAAAT+TGG | - | tig0017331:25602-25621 | None:intergenic | 25.0% |
| ! | AATCATTTCTCTTCTATCTT+AGG | + | tig0017331:25645-25664 | Msa1361040:intron | 25.0% |
| ! | TGGAAAGAAAAGTTCAATTA+GGG | - | tig0017331:25704-25723 | None:intergenic | 25.0% |
| ! | AAACTACTTACACATTTCTA+TGG | + | tig0017331:25843-25862 | Msa1361040:intron | 25.0% |
| !!! | TTTAGTTAACTTGTTAAGCA+AGG | + | tig0017331:25872-25891 | Msa1361040:intron | 25.0% |
| ! | TAAGGAAGAATTAAGTTTAC+CGG | - | tig0017331:26029-26048 | None:intergenic | 25.0% |
| !! | TACACAATAAAAGCTTTATC+CGG | + | tig0017331:26355-26374 | Msa1361040:CDS | 25.0% |
| ! | TTAAGATAAACAAACAAGGA+AGG | - | tig0017331:26511-26530 | None:intergenic | 25.0% |
| ! | AGATGAATGCTTAAGATATA+TGG | + | tig0017331:26545-26564 | Msa1361040:intron | 25.0% |
| !! | TTTAAAATATTGTGTGTTGC+AGG | + | tig0017331:26660-26679 | Msa1361040:intron | 25.0% |
| ! | ATAAGCATTTATGCTATAAG+TGG | - | tig0017331:26811-26830 | None:intergenic | 25.0% |
| ! | AATAAGATGAAAACAGCTTA+TGG | + | tig0017331:26942-26961 | Msa1361040:intron | 25.0% |
| ! | AGAATTCATTCCATTATTGT+TGG | - | tig0017331:27119-27138 | None:intergenic | 25.0% |
| !! | AACAATAATGGAATGAATTC+TGG | + | tig0017331:27118-27137 | Msa1361040:CDS | 25.0% |
| ! | CAATTTGAAGACTAAATTGA+TGG | - | tig0017331:27519-27538 | None:intergenic | 25.0% |
| ! | TCTAGCAACGAAAAATAAAT+TGG | - | tig0017331:27553-27572 | None:intergenic | 25.0% |
| !! | TTTTTAGATACTAAGCACAT+AGG | + | tig0017331:27597-27616 | Msa1361040:intron | 25.0% |
| !! | TTTTAGATACTAAGCACATA+GGG | + | tig0017331:27598-27617 | Msa1361040:intron | 25.0% |
| AATAACATAGAATGCAAGAC+AGG | - | tig0017331:23304-23323 | None:intergenic | 30.0% | |
| CTGAGGATGAAAAAAAGAAA+AGG | + | tig0017331:23433-23452 | Msa1361040:CDS | 30.0% | |
| GATGAAAAAAAGAAAAGGGT+TGG | + | tig0017331:23438-23457 | Msa1361040:CDS | 30.0% | |
| AGTTATGTCTATCTGTATTG+AGG | + | tig0017331:23539-23558 | Msa1361040:CDS | 30.0% | |
| !! | CATGTTTGTACCTTTAGAAT+TGG | + | tig0017331:23688-23707 | Msa1361040:intron | 30.0% |
| TCATACTTGACCAATTCTAA+AGG | - | tig0017331:23701-23720 | None:intergenic | 30.0% | |
| AAACATATTTCCAACCAATG+TGG | + | tig0017331:23798-23817 | Msa1361040:intron | 30.0% | |
| TGTCCGTAAATTGTTATGTT+TGG | + | tig0017331:24004-24023 | Msa1361040:intron | 30.0% | |
| ! | CTATAAGGATTTTGAATTCG+AGG | + | tig0017331:24721-24740 | Msa1361040:intron | 30.0% |
| !! | GTTCTAAAATACTATCCACA+AGG | + | tig0017331:24755-24774 | Msa1361040:CDS | 30.0% |
| ACCTGTTTACATTGAAAGAT+TGG | + | tig0017331:24805-24824 | Msa1361040:CDS | 30.0% | |
| CCTGTTTACATTGAAAGATT+GGG | + | tig0017331:24806-24825 | Msa1361040:CDS | 30.0% | |
| TGGATAAATCAATATACCTC+AGG | - | tig0017331:25358-25377 | None:intergenic | 30.0% | |
| TGTTCTTATAACACAACTGA+TGG | - | tig0017331:25378-25397 | None:intergenic | 30.0% | |
| CAAATCTCATCAACCATTAA+TGG | + | tig0017331:25476-25495 | Msa1361040:intron | 30.0% | |
| ATTAGGTGTTAAACTACATG+TGG | - | tig0017331:25558-25577 | None:intergenic | 30.0% | |
| CATGAAAGTTGTCAAAAACA+AGG | + | tig0017331:25613-25632 | Msa1361040:intron | 30.0% | |
| AAGTTCAATTAGGGTGAATT+TGG | - | tig0017331:25695-25714 | None:intergenic | 30.0% | |
| GTGGAAAGAAAAGTTCAATT+AGG | - | tig0017331:25705-25724 | None:intergenic | 30.0% | |
| ! | AATGCTTACATGGATTTTTG+AGG | - | tig0017331:25820-25839 | None:intergenic | 30.0% |
| GTAGTTTGAAAATGCTTACA+TGG | - | tig0017331:25830-25849 | None:intergenic | 30.0% | |
| ACATTAATGATTCATTGACC+AGG | + | tig0017331:25903-25922 | Msa1361040:intron | 30.0% | |
| ! | GAAAGGAGATAAATTTTACC+TGG | - | tig0017331:25974-25993 | None:intergenic | 30.0% |
| ! | ACGCTAATTTTCAATGAGAA+AGG | - | tig0017331:25991-26010 | None:intergenic | 30.0% |
| ATTTCCTTGGATGAATTAGA+TGG | + | tig0017331:26312-26331 | Msa1361040:intron | 30.0% | |
| ATGAATTAGATGGCTCAAAA+TGG | + | tig0017331:26322-26341 | Msa1361040:intron | 30.0% | |
| ! | ACACAATAAAAGCTTTATCC+GGG | + | tig0017331:26356-26375 | Msa1361040:CDS | 30.0% |
| AAACTTACACCATAGGATTT+GGG | - | tig0017331:26478-26497 | None:intergenic | 30.0% | |
| AAAACTTACACCATAGGATT+TGG | - | tig0017331:26479-26498 | None:intergenic | 30.0% | |
| ! | AATCCTATGGTGTAAGTTTT+AGG | + | tig0017331:26479-26498 | Msa1361040:intron | 30.0% |
| TTTCCTAAAACTTACACCAT+AGG | - | tig0017331:26485-26504 | None:intergenic | 30.0% | |
| CTTAAGATATATGGCACAAT+TGG | + | tig0017331:26554-26573 | Msa1361040:intron | 30.0% | |
| TCTAATTCTGCTTGAAAAGA+AGG | - | tig0017331:26581-26600 | None:intergenic | 30.0% | |
| ! | ACTTAAACGCAAACACTTTT+AGG | - | tig0017331:26834-26853 | None:intergenic | 30.0% |
| GTAGAAATGAAAGAACGAAA+TGG | - | tig0017331:27050-27069 | None:intergenic | 30.0% | |
| GATTGTTACTCCAACAATAA+TGG | + | tig0017331:27106-27125 | Msa1361040:intron | 30.0% | |
| ! | AATAATGGAATGAATTCTGG+TGG | + | tig0017331:27121-27140 | Msa1361040:CDS | 30.0% |
| GGATTTAGCAAACAATTTGT+TGG | + | tig0017331:27142-27161 | Msa1361040:CDS | 30.0% | |
| !! | TTTAGCAAACAATTTGTTGG+TGG | + | tig0017331:27145-27164 | Msa1361040:CDS | 30.0% |
| !! | ACAATTTGTTGGTGGAATTA+TGG | + | tig0017331:27153-27172 | Msa1361040:CDS | 30.0% |
| ! | TACTCATTGTTTGAAATTGC+AGG | - | tig0017331:27298-27317 | None:intergenic | 30.0% |
| ! | TTAAGCATTTCCTCTTTTTC+AGG | - | tig0017331:27394-27413 | None:intergenic | 30.0% |
| ! | AAGCAATACTAGTACCTTTT+TGG | - | tig0017331:27464-27483 | None:intergenic | 30.0% |
| AATGAATTTGACTCCCTAAT+TGG | + | tig0017331:27829-27848 | Msa1361040:intron | 30.0% | |
| AAATGCATACTATACTCTGC+AGG | + | tig0017331:23061-23080 | Msa1361040:intron | 35.0% | |
| TGTAAACAAAGGTCATGAGA+TGG | + | tig0017331:23404-23423 | Msa1361040:intron | 35.0% | |
| !! | TGAATTTTTGAACTTGCTCG+AGG | - | tig0017331:23490-23509 | None:intergenic | 35.0% |
| ATGATCCTCATATGATGCTA+AGG | + | tig0017331:23646-23665 | Msa1361040:CDS | 35.0% | |
| TGTTACCTTAGCATCATATG+AGG | - | tig0017331:23654-23673 | None:intergenic | 35.0% | |
| GCTAAGGTAACATTTGTGTT+TGG | + | tig0017331:23662-23681 | Msa1361040:intron | 35.0% | |
| ! | AATTGATTCCATCACCACAT+TGG | - | tig0017331:23815-23834 | None:intergenic | 35.0% |
| TAACTCAAACGCGATTCTAA+AGG | - | tig0017331:23971-23990 | None:intergenic | 35.0% | |
| TCATCACATAATCGAACAAG+AGG | + | tig0017331:24339-24358 | Msa1361040:intron | 35.0% | |
| ACATAATCGAACAAGAGGAT+AGG | + | tig0017331:24344-24363 | Msa1361040:intron | 35.0% | |
| CATAATCGAACAAGAGGATA+GGG | + | tig0017331:24345-24364 | Msa1361040:intron | 35.0% | |
| ! | TACCATGGTCTAGATTTTTG+AGG | + | tig0017331:24467-24486 | Msa1361040:intron | 35.0% |
| ! | ACCATGGTCTAGATTTTTGA+GGG | + | tig0017331:24468-24487 | Msa1361040:intron | 35.0% |
| CCCAATCTTTCAATGTAAAC+AGG | - | tig0017331:24809-24828 | None:intergenic | 35.0% | |
| ! | TGACCAAAGCACAACTATTT+TGG | + | tig0017331:24958-24977 | Msa1361040:CDS | 35.0% |
| CATCCAAAATAGTTGTGCTT+TGG | - | tig0017331:24964-24983 | None:intergenic | 35.0% | |
| !! | ACAACTATTTTGGATGTGCA+AGG | + | tig0017331:24968-24987 | Msa1361040:CDS | 35.0% |
| AAGTATGAACAAAGCTGCAA+GGG | + | tig0017331:25291-25310 | Msa1361040:CDS | 35.0% | |
| TTCTGTGACAACAATCTAAG+TGG | + | tig0017331:25413-25432 | Msa1361040:intron | 35.0% | |
| TTTCTCTTCTATCTTAGGCA+TGG | + | tig0017331:25650-25669 | Msa1361040:intron | 35.0% | |
| AGGCATGGCAATAGTTTAAA+TGG | + | tig0017331:25665-25684 | Msa1361040:intron | 35.0% | |
| !! | CAGCATTGATGATGAACATA+CGG | - | tig0017331:25740-25759 | None:intergenic | 35.0% |
| ! | ACTTGTACTTGTGCTGATAA+AGG | + | tig0017331:26156-26175 | Msa1361040:CDS | 35.0% |
| AAAACTACCTTCAAGATCTC+TGG | - | tig0017331:26219-26238 | None:intergenic | 35.0% | |
| ! | CACAATAAAAGCTTTATCCG+GGG | + | tig0017331:26357-26376 | Msa1361040:CDS | 35.0% |
| AGAAGAAACTGCATATCAGA+AGG | + | tig0017331:26402-26421 | Msa1361040:CDS | 35.0% | |
| GAAGAAACTGCATATCAGAA+GGG | + | tig0017331:26403-26422 | Msa1361040:CDS | 35.0% | |
| GACACTTGATGTTCATTGTT+TGG | + | tig0017331:26447-26466 | Msa1361040:CDS | 35.0% | |
| AAAAAAGGTAGCAATGGAGT+TGG | - | tig0017331:26643-26662 | None:intergenic | 35.0% | |
| !! | TTTGTCAAGTACTGGAACAA+AGG | - | tig0017331:26701-26720 | None:intergenic | 35.0% |
| !! | GCTGTTTTCGTAAGTTATCA+TGG | + | tig0017331:26907-26926 | Msa1361040:intron | 35.0% |
| ACACTATGTCAGAGAGTTTA+TGG | - | tig0017331:26986-27005 | None:intergenic | 35.0% | |
| ! | TGGAATTATGGCACTTGTTA+TGG | + | tig0017331:27165-27184 | Msa1361040:CDS | 35.0% |
| !! | GGAATTATGGCACTTGTTAT+GGG | + | tig0017331:27166-27185 | Msa1361040:CDS | 35.0% |
| TGCTTAATAATGCTCTAACC+AGG | + | tig0017331:27407-27426 | Msa1361040:CDS | 35.0% | |
| GCTTAATAATGCTCTAACCA+GGG | + | tig0017331:27408-27427 | Msa1361040:CDS | 35.0% | |
| AGTACTCTTGAACAAGAGTT+GGG | + | tig0017331:27433-27452 | Msa1361040:CDS | 35.0% | |
| AGAGTTGGGTAAAACCAAAA+AGG | + | tig0017331:27447-27466 | Msa1361040:CDS | 35.0% | |
| TAGTGCCTAAAGTCCAATTA+GGG | - | tig0017331:27845-27864 | None:intergenic | 35.0% | |
| AAGTTCTACTTGTCGAGTAA+GGG | - | tig0017331:27875-27894 | None:intergenic | 35.0% | |
| !! | ACTCACCAATTTTGACAGGT+CGG | - | tig0017331:23003-23022 | None:intergenic | 40.0% |
| !! | GACTACTCACCAATTTTGAC+AGG | - | tig0017331:23007-23026 | None:intergenic | 40.0% |
| TCATGAGATGGAACATTCTG+AGG | + | tig0017331:23416-23435 | Msa1361040:exon | 40.0% | |
| AAGGGTTGGGTCTATAAAGA+AGG | + | tig0017331:23452-23471 | Msa1361040:CDS | 40.0% | |
| ATTCATTCACCAAAAAGGGG+AGG | + | tig0017331:23505-23524 | Msa1361040:CDS | 40.0% | |
| ! | TTTTGATGCAGAAGAGTTGC+AGG | + | tig0017331:23566-23585 | Msa1361040:CDS | 40.0% |
| TGAGGATCATCATGCTTTGA+GGG | - | tig0017331:23636-23655 | None:intergenic | 40.0% | |
| ATGAGGATCATCATGCTTTG+AGG | - | tig0017331:23637-23656 | None:intergenic | 40.0% | |
| AAGTCAAACCTAACAGCTCA+CGG | - | tig0017331:23729-23748 | None:intergenic | 40.0% | |
| ATTTCCAACCAATGTGGTGA+TGG | + | tig0017331:23804-23823 | Msa1361040:intron | 40.0% | |
| CACATACGTACATGAGCTTT+GGG | + | tig0017331:24197-24216 | Msa1361040:intron | 40.0% | |
| CCATGGTACATTAACGTTAC+AGG | - | tig0017331:24455-24474 | None:intergenic | 40.0% | |
| CCTGTAACGTTAATGTACCA+TGG | + | tig0017331:24452-24471 | Msa1361040:intron | 40.0% | |
| TGTGGACAGATATGCTTAAG+TGG | + | tig0017331:24524-24543 | Msa1361040:CDS | 40.0% | |
| AGATATGCTTAAGTGGAGGA+AGG | + | tig0017331:24531-24550 | Msa1361040:CDS | 40.0% | |
| CTTAAGTGGAGGAAGGAATT+TGG | + | tig0017331:24538-24557 | Msa1361040:CDS | 40.0% | |
| !! | ATTTGGTGCTGACACTATCA+TGG | + | tig0017331:24555-24574 | Msa1361040:CDS | 40.0% |
| TACTATCCACAAGGACATCA+TGG | + | tig0017331:24764-24783 | Msa1361040:CDS | 40.0% | |
| !! | AGGACATCATGGAGTTGATA+AGG | + | tig0017331:24775-24794 | Msa1361040:CDS | 40.0% |
| !! | CATCATGGAGTTGATAAGGA+TGG | + | tig0017331:24779-24798 | Msa1361040:CDS | 40.0% |
| GTTGTTGCAAGTAACATCAG+TGG | + | tig0017331:24847-24866 | Msa1361040:CDS | 40.0% | |
| TTTGCTGCAATTGAACATGC+AGG | - | tig0017331:24929-24948 | None:intergenic | 40.0% | |
| !! | TATTTTGGATGTGCAAGGAG+TGG | + | tig0017331:24973-24992 | Msa1361040:CDS | 40.0% |
| CAATGGTAGAGGATCCAATT+TGG | - | tig0017331:25110-25129 | None:intergenic | 40.0% | |
| ATCCAGGTTCAAATCCAACA+AGG | + | tig0017331:25155-25174 | Msa1361040:intron | 40.0% | |
| GAAGTATGAACAAAGCTGCA+AGG | + | tig0017331:25290-25309 | Msa1361040:CDS | 40.0% | |
| ! | CGCTAATGAAGCACCATTAA+TGG | - | tig0017331:25492-25511 | None:intergenic | 40.0% |
| GATGATGAACATACGGTTCA+GGG | - | tig0017331:25733-25752 | None:intergenic | 40.0% | |
| ! | TGATGATGAACATACGGTTC+AGG | - | tig0017331:25734-25753 | None:intergenic | 40.0% |
| CGTATGTTCATCATCAATGC+TGG | + | tig0017331:25738-25757 | Msa1361040:CDS | 40.0% | |
| !! | TTCATCATCAATGCTGGTTC+TGG | + | tig0017331:25744-25763 | Msa1361040:CDS | 40.0% |
| !! | TCAATGCTGGTTCTGGATTT+AGG | + | tig0017331:25751-25770 | Msa1361040:CDS | 40.0% |
| ! | GTTCTGGATTTAGGCTATTG+TGG | + | tig0017331:25760-25779 | Msa1361040:CDS | 40.0% |
| !!! | TGGATTTTTGAGGTGGTCTT+GGG | - | tig0017331:25810-25829 | None:intergenic | 40.0% |
| !!! | ATGGATTTTTGAGGTGGTCT+TGG | - | tig0017331:25811-25830 | None:intergenic | 40.0% |
| !! | GCTTACATGGATTTTTGAGG+TGG | - | tig0017331:25817-25836 | None:intergenic | 40.0% |
| ! | TGCTCTGGTATTTGTTACCT+AGG | - | tig0017331:25930-25949 | None:intergenic | 40.0% |
| GCGTGACTTAATTAAGAAGC+CGG | + | tig0017331:26007-26026 | Msa1361040:intron | 40.0% | |
| AGTGAACTTCCAGAGTTCTT+GGG | + | tig0017331:26129-26148 | Msa1361040:intron | 40.0% | |
| ! | TGTACTTGTGCTGATAAAGG+TGG | + | tig0017331:26159-26178 | Msa1361040:CDS | 40.0% |
| AAGATCTCTGGATCATTCCA+TGG | - | tig0017331:26207-26226 | None:intergenic | 40.0% | |
| GAATGATCCAGAGATCTTGA+AGG | + | tig0017331:26209-26228 | Msa1361040:CDS | 40.0% | |
| TGAGCCATCTAATTCATCCA+AGG | - | tig0017331:26319-26338 | None:intergenic | 40.0% | |
| TAGATGGCTCAAAATGGTGT+TGG | + | tig0017331:26328-26347 | Msa1361040:intron | 40.0% | |
| CAATGAACATCAAGTGTCTC+TGG | - | tig0017331:26445-26464 | None:intergenic | 40.0% | |
| TTGGATCAACCCAAATCCTA+TGG | + | tig0017331:26466-26485 | Msa1361040:CDS | 40.0% | |
| TCAACTGCTTTGTCAAGTAC+TGG | - | tig0017331:26709-26728 | None:intergenic | 40.0% | |
| ! | ACAAAGCAGTTGATTCTTCG+TGG | + | tig0017331:26716-26735 | Msa1361040:CDS | 40.0% |
| GACAAATACGTGCTTTCGAA+AGG | + | tig0017331:26757-26776 | Msa1361040:CDS | 40.0% | |
| AATACGTGCTTTCGAAAGGT+AGG | + | tig0017331:26761-26780 | Msa1361040:intron | 40.0% | |
| GAGTAACAATCTGCAGCATA+AGG | - | tig0017331:27097-27116 | None:intergenic | 40.0% | |
| GCTACTTGTCATGCGAATTA+TGG | - | tig0017331:27200-27219 | None:intergenic | 40.0% | |
| ATCACAGAAGCAGCACTTTA+TGG | + | tig0017331:27232-27251 | Msa1361040:CDS | 40.0% | |
| GGCAACTCAGTGTATTATGA+TGG | + | tig0017331:27256-27275 | Msa1361040:CDS | 40.0% | |
| AATTGCAGGTGCTTTCATCA+TGG | - | tig0017331:27284-27303 | None:intergenic | 40.0% | |
| !!! | AGCATTTCCTCTTTTTCAGG+AGG | - | tig0017331:27391-27410 | None:intergenic | 40.0% |
| CAGTACTCTTGAACAAGAGT+TGG | + | tig0017331:27432-27451 | Msa1361040:CDS | 40.0% | |
| TGACTCCCTAATTGGACTTT+AGG | + | tig0017331:27837-27856 | Msa1361040:intron | 40.0% | |
| CTAGTGCCTAAAGTCCAATT+AGG | - | tig0017331:27846-27865 | None:intergenic | 40.0% | |
| CTAATTGGACTTTAGGCACT+AGG | + | tig0017331:27844-27863 | Msa1361040:intron | 40.0% | |
| CAAGTTCTACTTGTCGAGTA+AGG | - | tig0017331:27876-27895 | None:intergenic | 40.0% | |
| ACTCGACAAGTAGAACTTGA+AGG | + | tig0017331:27877-27896 | Msa1361040:CDS | 40.0% | |
| !! | ATTTTGACAGGTCGGTCAAG+AGG | - | tig0017331:22995-23014 | None:intergenic | 45.0% |
| CTTGACCGACCTGTCAAAAT+TGG | + | tig0017331:22995-23014 | Msa1361040:five_prime_UTR | 45.0% | |
| GGTTGGGTCTATAAAGAAGG+TGG | + | tig0017331:23455-23474 | Msa1361040:CDS | 45.0% | |
| TGATTTGACCGTGAGCTGTT+AGG | + | tig0017331:23718-23737 | Msa1361040:intron | 45.0% | |
| GATTCCATCACCACATTGGT+TGG | - | tig0017331:23811-23830 | None:intergenic | 45.0% | |
| CCAAAGCTCATGTACGTATG+TGG | - | tig0017331:24199-24218 | None:intergenic | 45.0% | |
| CCACATACGTACATGAGCTT+TGG | + | tig0017331:24196-24215 | Msa1361040:intron | 45.0% | |
| GCCCTCAAAAATCTAGACCA+TGG | - | tig0017331:24472-24491 | None:intergenic | 45.0% | |
| GGACAGATATGCTTAAGTGG+AGG | + | tig0017331:24527-24546 | Msa1361040:CDS | 45.0% | |
| TCAACTCCATGATGTCCTTG+TGG | - | tig0017331:24773-24792 | None:intergenic | 45.0% | |
| ACCATGTACGAGAGTTTGAG+AGG | + | tig0017331:24885-24904 | Msa1361040:CDS | 45.0% | |
| CCATGTACGAGAGTTTGAGA+GGG | + | tig0017331:24886-24905 | Msa1361040:CDS | 45.0% | |
| GCATCATACTGCAATGGTAG+AGG | - | tig0017331:25121-25140 | None:intergenic | 45.0% | |
| ATTGCAGTATGATGCTGCAG+CGG | + | tig0017331:25126-25145 | Msa1361040:intron | 45.0% | |
| ! | TGCCTTGTTGGATTTGAACC+TGG | - | tig0017331:25160-25179 | None:intergenic | 45.0% |
| !! | CATCAATCTTCTGAAGCCTC+TGG | - | tig0017331:25324-25343 | None:intergenic | 45.0% |
| CAGAGGCTTCAGAAGATTGA+TGG | + | tig0017331:25322-25341 | Msa1361040:CDS | 45.0% | |
| ! | TGATGGTGACAACTATCCTG+AGG | + | tig0017331:25339-25358 | Msa1361040:CDS | 45.0% |
| TGATTCATTGACCAGGTCCT+AGG | + | tig0017331:25910-25929 | Msa1361040:intron | 45.0% | |
| ! | GGTATTTGTTACCTAGGACC+TGG | - | tig0017331:25924-25943 | None:intergenic | 45.0% |
| ! | TGACTTCAAGCAACTTGCTC+TGG | - | tig0017331:25945-25964 | None:intergenic | 45.0% |
| TGCTTGAAGTCATTGATGCC+AGG | + | tig0017331:25953-25972 | Msa1361040:CDS | 45.0% | |
| ! | CAAGAACTCTGGAAGTTCAC+TGG | - | tig0017331:26130-26149 | None:intergenic | 45.0% |
| CAGTGAACTTCCAGAGTTCT+TGG | + | tig0017331:26128-26147 | Msa1361040:intron | 45.0% | |
| TGGATGCATGCTATCTGACA+AGG | + | tig0017331:26179-26198 | Msa1361040:CDS | 45.0% | |
| GGATGCATGCTATCTGACAA+GGG | + | tig0017331:26180-26199 | Msa1361040:CDS | 45.0% | |
| ! | AAAAGCTTTATCCGGGGTTG+AGG | + | tig0017331:26363-26382 | Msa1361040:CDS | 45.0% |
| ! | GATTGTTTTCTCCTCAACCC+CGG | - | tig0017331:26377-26396 | None:intergenic | 45.0% |
| ! | GCTGCTTCTGTGATTTTCCT+TGG | - | tig0017331:27226-27245 | None:intergenic | 45.0% |
| ACAGAAGCAGCACTTTATGG+TGG | + | tig0017331:27235-27254 | Msa1361040:CDS | 45.0% | |
| !!! | TCTTTTTCAGGAGGCATGAC+AGG | - | tig0017331:27382-27401 | None:intergenic | 45.0% |
| TGTCATGCCTCCTGAAAAAG+AGG | + | tig0017331:27381-27400 | Msa1361040:CDS | 45.0% | |
| !! | TTGTTCAAGAGTACTGACCC+TGG | - | tig0017331:27428-27447 | None:intergenic | 45.0% |
| !! | TGGTGCTGACACTATCATGG+AGG | + | tig0017331:24558-24577 | Msa1361040:CDS | 50.0% |
| CCCTCTCAAACTCTCGTACA+TGG | - | tig0017331:24889-24908 | None:intergenic | 50.0% | |
| GCTGCAGCATCATACTGCAA+TGG | - | tig0017331:25127-25146 | None:intergenic | 50.0% | |
| !! | CAATCTTCTGAAGCCTCTGG+AGG | - | tig0017331:25321-25340 | None:intergenic | 50.0% |
| ! | TTGAGGTGGTCTTGGGATCT+AGG | - | tig0017331:25803-25822 | None:intergenic | 50.0% |
| GAACTTCCAGAGTTCTTGGG+TGG | + | tig0017331:26132-26151 | Msa1361040:CDS | 50.0% | |
| CAAGTACCACCCAAGAACTC+TGG | - | tig0017331:26141-26160 | None:intergenic | 50.0% | |
| TGCTATCTGACAAGGGTCCA+TGG | + | tig0017331:26187-26206 | Msa1361040:CDS | 50.0% | |
| GCATGACAAGTAGCATGCCA+AGG | + | tig0017331:27206-27225 | Msa1361040:CDS | 50.0% | |
| TATGGCCATGATGAAGCGCA+TGG | + | tig0017331:27318-27337 | Msa1361040:CDS | 50.0% | |
| TTCAGCCATGCGCTTCATCA+TGG | - | tig0017331:27326-27345 | None:intergenic | 50.0% | |
| ! | GCTGTGCTTCCTCCCCTTTT+TGG | - | tig0017331:23517-23536 | None:intergenic | 55.0% |
| GTATGATGCTGCAGCGGTAG+AGG | + | tig0017331:25132-25151 | Msa1361040:intron | 55.0% | |
| CATACGGTTCAGGGACTGTG+TGG | - | tig0017331:25724-25743 | None:intergenic | 55.0% | |
| ! | ACAGGTCGGTCAAGAGGTGC+GGG | - | tig0017331:22989-23008 | None:intergenic | 60.0% |
| GACAGGTCGGTCAAGAGGTG+CGG | - | tig0017331:22990-23009 | None:intergenic | 60.0% | |
| CTGCAAGGGATCTCCTCCAG+AGG | + | tig0017331:25305-25324 | Msa1361040:CDS | 60.0% | |
| GCTGCAGCGGTAGAGGATCC+AGG | + | tig0017331:25139-25158 | Msa1361040:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017331 | gene | 22984 | 27933 | 22984 | ID=Msa1361040;Name=Msa1361040 |
| tig0017331 | mRNA | 22984 | 27933 | 22984 | ID=Msa1361040-mRNA-1;Parent=Msa1361040;Name=Msa1361040-mRNA-1;_AED=0.13;_eAED=0.13;_QI=41|0.45|0.33|0.91|0.90|0.83|12|0|545 |
| tig0017331 | exon | 22984 | 23016 | 22984 | ID=Msa1361040-mRNA-1:exon:12216;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 23415 | 23667 | 23415 | ID=Msa1361040-mRNA-1:exon:12217;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 24480 | 24579 | 24480 | ID=Msa1361040-mRNA-1:exon:12218;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 24728 | 24994 | 24728 | ID=Msa1361040-mRNA-1:exon:12219;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 25283 | 25360 | 25283 | ID=Msa1361040-mRNA-1:exon:12220;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 25729 | 25830 | 25729 | ID=Msa1361040-mRNA-1:exon:12221;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 25925 | 25974 | 25925 | ID=Msa1361040-mRNA-1:exon:12222;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 26131 | 26230 | 26131 | ID=Msa1361040-mRNA-1:exon:12223;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 26331 | 26489 | 26331 | ID=Msa1361040-mRNA-1:exon:12224;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 26682 | 26778 | 26682 | ID=Msa1361040-mRNA-1:exon:12225;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 27107 | 27468 | 27107 | ID=Msa1361040-mRNA-1:exon:12226;Parent=Msa1361040-mRNA-1 |
| tig0017331 | exon | 27859 | 27933 | 27859 | ID=Msa1361040-mRNA-1:exon:12227;Parent=Msa1361040-mRNA-1 |
| tig0017331 | five_prime_UTR | 22984 | 23016 | 22984 | ID=Msa1361040-mRNA-1:five_prime_utr;Parent=Msa1361040-mRNA-1 |
| tig0017331 | five_prime_UTR | 23415 | 23422 | 23415 | ID=Msa1361040-mRNA-1:five_prime_utr;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 23423 | 23667 | 23423 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 24480 | 24579 | 24480 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 24728 | 24994 | 24728 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 25283 | 25360 | 25283 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 25729 | 25830 | 25729 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 25925 | 25974 | 25925 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 26131 | 26230 | 26131 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 26331 | 26489 | 26331 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 26682 | 26778 | 26682 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 27107 | 27468 | 27107 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| tig0017331 | CDS | 27859 | 27933 | 27859 | ID=Msa1361040-mRNA-1:cds;Parent=Msa1361040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
