AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222240 MtrunA17_Chr2g0326871 95.907 562 6 2 70 614 142 703 0.0 1113
Msa0222240 MtrunA17_Chr2g0326871 56.604 159 56 4 1 158 1 147 5.12e-38 149
Msa0222240 MtrunA17_Chr4g0028861 81.414 495 79 1 71 552 190 684 0.0 849
Msa0222240 MtrunA17_Chr1g0181121 61.189 572 194 4 71 614 110 681 0.0 742
Msa0222240 MtrunA17_Chr2g0305771 59.408 574 203 5 71 614 114 687 0.0 684
Msa0222240 MtrunA17_Chr3g0139071 58.204 579 207 5 71 614 144 722 0.0 671
Msa0222240 MtrunA17_Chr7g0228181 54.641 571 232 5 71 614 110 680 0.0 644
Msa0222240 MtrunA17_Chr3g0125651 52.048 586 237 6 71 612 102 687 0.0 611
Msa0222240 MtrunA17_Chr1g0158861 53.390 590 234 8 57 614 134 714 0.0 605
Msa0222240 MtrunA17_Chr3g0126541 52.922 599 245 9 46 614 120 711 0.0 605
Msa0222240 MtrunA17_Chr4g0073941 53.968 567 234 7 71 614 166 728 0.0 602
Msa0222240 MtrunA17_Chr4g0001481 53.310 574 234 9 70 612 167 737 0.0 580
Msa0222240 MtrunA17_Chr7g0275581 52.930 546 228 8 70 593 149 687 0.0 545
Msa0222240 MtrunA17_Chr8g0347121 47.333 600 256 7 70 611 126 723 3.98e-177 520
Msa0222240 MtrunA17_Chr2g0326861 94.203 207 12 0 79 285 14 220 8.31e-141 408
Msa0222240 MtrunA17_Chr8g0360821 37.087 515 271 16 71 548 129 627 2.15e-99 317
Msa0222240 MtrunA17_Chr2g0318561 36.885 488 265 10 120 574 2 479 4.14e-99 311
Msa0222240 MtrunA17_Chr6g0481021 37.911 517 282 10 68 553 187 695 1.53e-96 310
Msa0222240 MtrunA17_Chr6g0480851 37.132 509 286 11 71 553 251 751 2.72e-88 290
Msa0222240 MtrunA17_Chr7g0218341 34.857 525 287 14 73 559 179 686 3.64e-88 288
Msa0222240 MtrunA17_Chr6g0480781 35.560 509 294 12 71 553 236 736 1.15e-85 283
Msa0222240 MtrunA17_Chr6g0480671 37.859 523 275 13 71 559 260 766 8.37e-85 281
Msa0222240 MtrunA17_Chr2g0326851 90.076 131 9 1 488 614 3 133 1.63e-77 242
Msa0222240 MtrunA17_Chr6g0480741 33.075 517 302 16 68 553 179 682 3.82e-66 229
Msa0222240 MtrunA17_Chr6g0480681 30.345 580 321 18 71 591 181 736 1.84e-61 217
Msa0222240 MtrunA17_Chr5g0395421 33.244 373 203 13 180 526 3 355 1.19e-42 157
Msa0222240 MtrunA17_Chr6g0480771 35.573 253 138 8 309 547 12 253 8.89e-34 130
Msa0222240 MtrunA17_Chr5g0395411 44.444 135 73 2 70 203 225 358 7.47e-30 121
Msa0222240 MtrunA17_Chr6g0480841 40.404 198 98 7 363 547 2 192 9.14e-30 117
Msa0222240 MtrunA17_Chr6g0480821 27.211 147 101 3 121 264 25 168 1.94e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222240 AT2G28260.1 72.581 558 128 3 70 614 133 678 0.0 837
Msa0222240 AT2G28260.1 41.584 101 42 4 1 101 1 84 6.03e-11 65.9
Msa0222240 AT2G28260.2 72.581 558 128 3 70 614 93 638 0.0 835
Msa0222240 AT4G30360.1 56.747 578 216 5 71 614 140 717 0.0 659
Msa0222240 AT2G24610.1 56.947 583 210 6 71 612 141 723 0.0 654
Msa0222240 AT2G24610.2 56.947 583 210 6 71 612 156 738 0.0 652
Msa0222240 AT4G30560.1 55.810 568 220 8 71 614 170 730 0.0 625
Msa0222240 AT4G30560.4 55.810 568 220 8 71 614 170 730 0.0 625
Msa0222240 AT4G30560.5 55.810 568 220 8 71 614 144 704 0.0 625
Msa0222240 AT4G30560.2 55.810 568 220 8 71 614 144 704 0.0 625
Msa0222240 AT4G30560.3 55.810 568 220 8 71 614 144 704 0.0 625
Msa0222240 AT2G23980.9 54.671 578 226 6 71 614 170 745 0.0 624
Msa0222240 AT2G23980.10 54.671 578 226 6 71 614 170 745 0.0 624
Msa0222240 AT2G23980.1 54.671 578 226 6 71 614 170 745 0.0 624
Msa0222240 AT2G23980.4 54.671 578 226 6 71 614 170 745 0.0 624
Msa0222240 AT2G23980.5 54.671 578 226 6 71 614 170 745 0.0 624
Msa0222240 AT2G23980.6 54.671 578 226 6 71 614 143 718 0.0 624
Msa0222240 AT5G57940.3 54.225 568 231 5 71 614 148 710 0.0 613
Msa0222240 AT5G14870.1 50.924 595 239 7 71 612 106 700 0.0 613
Msa0222240 AT5G57940.1 54.225 568 231 5 71 614 155 717 0.0 613
Msa0222240 AT5G57940.2 54.225 568 231 5 71 614 155 717 0.0 613
Msa0222240 AT2G23980.3 52.579 601 226 7 71 614 170 768 0.0 610
Msa0222240 AT2G23980.2 52.579 601 226 7 71 614 170 768 0.0 610
Msa0222240 AT2G23980.8 52.579 601 226 7 71 614 170 768 0.0 610
Msa0222240 AT2G23980.7 52.579 601 226 7 71 614 170 768 0.0 610
Msa0222240 AT1G15990.1 53.663 587 225 8 70 614 157 738 0.0 605
Msa0222240 AT5G53130.1 54.466 571 227 5 71 614 151 715 0.0 602
Msa0222240 AT1G19780.1 53.516 583 229 8 70 611 163 744 0.0 602
Msa0222240 AT3G48010.1 55.731 506 202 4 71 554 111 616 0.0 586
Msa0222240 AT1G01340.2 50.947 581 235 9 71 612 135 704 0.0 583
Msa0222240 AT1G01340.1 50.947 581 235 9 71 612 130 699 0.0 582
Msa0222240 AT4G01010.1 50.083 601 267 9 37 612 100 692 0.0 577
Msa0222240 AT4G01010.2 50.083 601 267 9 37 612 100 692 0.0 577
Msa0222240 AT2G46430.1 50.088 569 250 9 71 611 139 701 0.0 548
Msa0222240 AT2G46430.2 50.088 569 250 9 71 611 139 701 0.0 548
Msa0222240 AT1G19780.2 52.908 533 209 8 120 611 2 533 0.0 538
Msa0222240 AT2G46440.1 44.886 528 261 11 77 582 102 621 3.81e-133 403
Msa0222240 AT2G46440.2 46.756 447 213 8 157 582 1 443 4.92e-120 363
Msa0222240 AT2G46450.3 39.564 551 289 14 67 591 52 584 1.14e-119 368
Msa0222240 AT2G46450.2 39.564 551 289 14 67 591 65 597 1.31e-119 369
Msa0222240 AT2G46450.4 39.851 537 283 13 77 591 102 620 2.90e-118 366
Msa0222240 AT2G46450.1 39.851 537 283 13 77 591 102 620 2.90e-118 366
Msa0222240 AT5G54250.2 37.347 490 263 13 97 554 177 654 1.07e-95 308
Msa0222240 AT5G54250.1 37.347 490 263 13 97 554 177 654 1.07e-95 308
Msa0222240 AT5G54250.4 37.347 490 263 13 97 554 177 654 1.07e-95 308
Msa0222240 AT3G17690.1 38.933 506 267 16 71 548 225 716 2.42e-95 308
Msa0222240 AT3G17700.1 40.080 499 260 14 71 542 259 745 4.67e-91 298
Msa0222240 AT5G54250.3 36.777 484 257 14 97 548 177 643 2.31e-90 294
Msa0222240 AT5G15410.2 36.111 504 278 12 73 542 183 676 1.80e-86 285
Msa0222240 AT5G15410.1 35.968 506 280 12 71 542 182 677 2.18e-86 285
Msa0222240 AT3G17690.2 39.336 422 223 12 71 473 225 632 6.33e-83 273
Msa0222240 AT3G17700.2 40.566 424 225 11 71 479 259 670 2.22e-80 268
Msa0222240 AT3G17690.3 38.462 299 158 9 71 350 225 516 2.99e-50 182

Find 135 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAGAAATTTGATTCTT+TGG 0.173457 2_1:+71252636 Msa0222240:five_prime_UTR
GGAATATTTCTCACTTTAAT+TGG 0.178020 2_1:+71252345 Msa0222240:five_prime_UTR
GTAAATATAATCAATATAAA+TGG 0.208829 2_1:+71255348 Msa0222240:CDS
GTTTGGAGGGTGCAGTTCTT+TGG 0.210884 2_1:+71254805 Msa0222240:intron
AAAGGTGTTAATATGCATTC+TGG 0.262434 2_1:+71256403 Msa0222240:CDS
GTCACACTCCCCTTAAAATA+TGG 0.279845 2_1:-71252211 None:intergenic
GAGAAATCAAATTGTCAATA+TGG 0.294895 2_1:+71254442 Msa0222240:CDS
CGAATAGACTCTCGTAGTTC+TGG 0.297309 2_1:-71255326 None:intergenic
TATTATTGCAGGTGTTGATT+TGG 0.298468 2_1:+71253695 Msa0222240:intron
TTTGGAGGGTGCAGTTCTTT+GGG 0.302499 2_1:+71254806 Msa0222240:intron
AAGGACTTCCGCTGGATCTT+AGG 0.302671 2_1:+71255408 Msa0222240:CDS
ATTCTTTGGGAAAACCAGTA+TGG 0.304135 2_1:+71252650 Msa0222240:exon
ATTGTGCAATTTGTTTGTTT+TGG 0.304710 2_1:+71256513 Msa0222240:three_prime_UTR
CACACTTGGTCTTGGATCTA+AGG 0.318439 2_1:-71256047 None:intergenic
GAAGAGAAATTTGATTCTTT+GGG 0.321524 2_1:+71252637 Msa0222240:five_prime_UTR
CCTATTCTAAGATTGCTCTT+AGG 0.322226 2_1:+71253280 Msa0222240:CDS
CTAGCATTCTTTCATCCATT+TGG 0.323336 2_1:-71255823 None:intergenic
GAAGCACACCTTTCAGATCT+TGG 0.324891 2_1:-71252684 None:intergenic
CTTGACGTTCTATTGATAGA+AGG 0.346761 2_1:-71254390 None:intergenic
GCTATTGTGGTTGCAACTCT+TGG 0.355052 2_1:+71254872 Msa0222240:CDS
GAAATGCTCTTCATAATTAG+AGG 0.358622 2_1:+71255923 Msa0222240:CDS
TGCTGCATTGCCTCTTCCTC+AGG 0.378993 2_1:+71253335 Msa0222240:CDS
TGCAGCAGAGGGAAATGCTT+TGG 0.385038 2_1:+71252324 Msa0222240:five_prime_UTR
TTCATATATAAATTAGAGAT+AGG 0.385858 2_1:+71256544 Msa0222240:three_prime_UTR
TGGATTATCAAATCCCATAC+TGG 0.390216 2_1:-71252664 None:intergenic
CAAGGGTTGCAAGGAATACT+AGG 0.391426 2_1:+71256380 Msa0222240:CDS
CCAACTGGTTTCTAGTTCAT+AGG 0.394399 2_1:+71252283 Msa0222240:five_prime_UTR
GGTTCCCTTGTTTGACCAAA+TGG 0.396986 2_1:+71255808 Msa0222240:intron
ATTCACACCAATGGAGAACT+TGG 0.401526 2_1:+71256209 Msa0222240:CDS
ATGAAGAGCATTTCGTTCAC+TGG 0.405862 2_1:-71255914 None:intergenic
GATTATTATACCAACACTTA+GGG 0.406775 2_1:+71253717 Msa0222240:CDS
TCCCACAACAAGTGGAGTTA+AGG 0.407478 2_1:+71252840 Msa0222240:CDS
GGATTATTATACCAACACTT+AGG 0.409310 2_1:+71253716 Msa0222240:CDS
AACGGATAAAAGCCGGCATT+TGG 0.410069 2_1:-71254544 None:intergenic
TCACAAATTGTAAAAGCTAC+AGG 0.415804 2_1:+71253829 Msa0222240:CDS
CCTAAGAGCAATCTTAGAAT+AGG 0.417424 2_1:-71253280 None:intergenic
CACCTTAACTCCACTTGTTG+TGG 0.420551 2_1:-71252842 None:intergenic
CTTGATTCATACACAACAAA+TGG 0.422331 2_1:+71255950 Msa0222240:CDS
GGGAGTATCACACTTGGTCT+TGG 0.424283 2_1:-71256055 None:intergenic
TTTACAATTTGTGATGAAAG+TGG 0.430401 2_1:-71253820 None:intergenic
ACCTTAACTCCACTTGTTGT+GGG 0.432233 2_1:-71252841 None:intergenic
TTGGAAAAGTGTGTGCAATA+TGG 0.436003 2_1:+71254420 Msa0222240:CDS
TTAACTGTTCTTGTGGAAGA+AGG 0.448046 2_1:-71256076 None:intergenic
CTTTGTCTTGAACTAGTTCG+AGG 0.455073 2_1:+71255449 Msa0222240:CDS
CATGGAGAAGGCACAAGAAA+AGG 0.459490 2_1:+71256254 Msa0222240:CDS
GGAAAGAAGCTGCTGAATTG+AGG 0.459874 2_1:+71256275 Msa0222240:CDS
AAGGTGTTAATATGCATTCT+GGG 0.461316 2_1:+71256404 Msa0222240:CDS
TGTGGTTGCAACTCTTGGAT+TGG 0.461815 2_1:+71254877 Msa0222240:CDS
GAAAGAAGCTGCTGAATTGA+GGG 0.466076 2_1:+71256276 Msa0222240:CDS
ACTATGCATGATGCACTTTG+TGG 0.470656 2_1:+71256602 Msa0222240:three_prime_UTR
TAAATATAATCAATATAAAT+GGG 0.474688 2_1:+71255349 Msa0222240:CDS
AAGGTGAAATACCACATTGA+TGG 0.478709 2_1:+71252859 Msa0222240:CDS
CAACCTCATGCTTTACATGT+TGG 0.485217 2_1:+71253888 Msa0222240:CDS
TTCTTCAACTCATGTAGAAT+CGG 0.487881 2_1:+71255986 Msa0222240:CDS
AGAAATAATGGTTGCTATTG+TGG 0.489273 2_1:+71254859 Msa0222240:CDS
TTCATCCATTTGGTCAAACA+AGG 0.490363 2_1:-71255813 None:intergenic
CTCATAGGTACCTGAGGAAG+AGG 0.499692 2_1:-71253345 None:intergenic
TAGAAGTACTTATTGAAGAA+TGG 0.503317 2_1:-71254610 None:intergenic
TATACTGCAACTCCTCCAAC+TGG 0.503848 2_1:+71252268 Msa0222240:five_prime_UTR
GACGAACGGTTATCGATTGA+AGG 0.504792 2_1:-71255241 None:intergenic
TTATGTTGCTCCTTCTTCGA+AGG 0.509627 2_1:+71253230 Msa0222240:CDS
TTCTTTGGGAAAACCAGTAT+GGG 0.512800 2_1:+71252651 Msa0222240:exon
GAATCTTGTGGCAGCTTCAG+AGG 0.513529 2_1:+71256306 Msa0222240:CDS
GCACTTTGTGGATGATGTCT+TGG 0.518977 2_1:+71256614 Msa0222240:three_prime_UTR
TTGTGATATACTTACATGGC+TGG 0.519386 2_1:-71253911 None:intergenic
AGCTGCTGAATTGAGGGCTA+AGG 0.522860 2_1:+71256282 Msa0222240:CDS
CACAAATTGTAAAAGCTACA+GGG 0.525537 2_1:+71253830 Msa0222240:CDS
TTATTCAAGCTGCATGGAGA+AGG 0.526489 2_1:+71256242 Msa0222240:CDS
TAACTGTTCTTGTGGAAGAA+GGG 0.531786 2_1:-71256075 None:intergenic
GGGTGCAGTTCTTTGGGACA+AGG 0.533291 2_1:+71254812 Msa0222240:intron
AACTCATGTAGAATCGGTCC+AGG 0.535190 2_1:+71255992 Msa0222240:CDS
AATTTATGTTCACCAAATGC+CGG 0.535721 2_1:+71254532 Msa0222240:CDS
GAAAGCTTTAACTGTTCTTG+TGG 0.538709 2_1:-71256083 None:intergenic
TGCTCTTAGGTACTTCAGCA+AGG 0.549675 2_1:+71253293 Msa0222240:CDS
TGATGTAACTTCGGAAGTCA+TGG 0.553176 2_1:-71254584 None:intergenic
TCTTCTCAAAGGACTTCCGC+TGG 0.553705 2_1:+71255400 Msa0222240:CDS
TATACCAAACGGATAAAAGC+CGG 0.557769 2_1:-71254551 None:intergenic
TTTATGGAACAAGGGTTGCA+AGG 0.560809 2_1:+71256371 Msa0222240:CDS
TCTTCACCACAGAAATCGCC+TGG 0.562215 2_1:-71256010 None:intergenic
ATTGCTGATTGGTAATATGC+AGG 0.564527 2_1:+71254910 Msa0222240:CDS
TTCACACCAATGGAGAACTT+GGG 0.569483 2_1:+71256210 Msa0222240:CDS
GGATAAGTTGCTTGCAGCAG+AGG 0.569822 2_1:+71252312 Msa0222240:five_prime_UTR
GCATCAGCATATATACCAAA+CGG 0.570370 2_1:-71254562 None:intergenic
AAGCAGCCCAAGTTCTCCAT+TGG 0.571876 2_1:-71256216 None:intergenic
GTTCCCTCAGTGCATAATGC+AGG 0.571915 2_1:-71255869 None:intergenic
ACAACAAATGGAGGCCGTGA+CGG 0.574379 2_1:+71255962 Msa0222240:CDS
GAGGAAGAAGATCTTCTCAA+AGG 0.575171 2_1:+71255389 Msa0222240:CDS
TAGAACGTCAAGAAGCATGT+TGG 0.581133 2_1:+71254401 Msa0222240:CDS
GCTCTTAGGTACTTCAGCAA+GGG 0.584716 2_1:+71253294 Msa0222240:CDS
TGGTTTCTAGTTCATAGGTG+TGG 0.586045 2_1:+71252288 Msa0222240:five_prime_UTR
GAATGGCGATGATGTAACTT+CGG 0.588257 2_1:-71254593 None:intergenic
GGGTTGTTACAGAAACAGCA+TGG 0.594816 2_1:+71253851 Msa0222240:CDS
GTTACAGAAACAGCATGGGC+AGG 0.595665 2_1:+71253856 Msa0222240:CDS
CCTATGAACTAGAAACCAGT+TGG 0.597683 2_1:-71252283 None:intergenic
GCTATAAACCAAGCTACTCT+CGG 0.598310 2_1:-71254496 None:intergenic
GGTGGCTACACGAGGAGTAG+AGG 0.598943 2_1:+71255370 Msa0222240:CDS
TTTCTAGTTCATAGGTGTGG+AGG 0.600735 2_1:+71252291 Msa0222240:five_prime_UTR
ATGAACTAGAAACCAGTTGG+AGG 0.603367 2_1:-71252280 None:intergenic
GGAACTTATCTTGTTCGCGA+AGG 0.606182 2_1:+71255887 Msa0222240:CDS
TTGTTGTGTATGAATCAAGA+TGG 0.607110 2_1:-71255946 None:intergenic
GTGGTGAAGAGCTCTTAACA+TGG 0.607722 2_1:+71256023 Msa0222240:CDS
TAACCGTTCGTCTAGAAGAG+TGG 0.612435 2_1:+71255252 Msa0222240:CDS
AAGATGCTCCGAGAGTAGCT+TGG 0.612832 2_1:+71254488 Msa0222240:CDS
CCTCCACTCTTCTAGACGAA+CGG 0.613285 2_1:-71255255 None:intergenic
TCATCCATTTGGTCAAACAA+GGG 0.614441 2_1:-71255812 None:intergenic
TTGATAATCCAAGATCTGAA+AGG 0.616294 2_1:+71252676 Msa0222240:CDS
GACTACATAGTAAACAACTT+AGG 0.617133 2_1:+71256170 Msa0222240:CDS
AAGCCTGCATTATGCACTGA+GGG 0.618536 2_1:+71255866 Msa0222240:CDS
GATAAGTTGCTTGCAGCAGA+GGG 0.620001 2_1:+71252313 Msa0222240:five_prime_UTR
AGTCTCAAAAGAATGCTACA+AGG 0.630706 2_1:+71252911 Msa0222240:CDS
CGTTCGTCTAGAAGAGTGGA+GGG 0.630762 2_1:+71255256 Msa0222240:CDS
AACACTTAGGGGTTCAACCA+TGG 0.634663 2_1:+71253729 Msa0222240:CDS
CCGTTCGTCTAGAAGAGTGG+AGG 0.639971 2_1:+71255255 Msa0222240:CDS
AAAGAACTGACACAGAACAA+TGG 0.642598 2_1:+71255282 Msa0222240:CDS
ATAGACTCTCGTAGTTCTGG+AGG 0.643923 2_1:-71255323 None:intergenic
ATCGGTCCAGGCGATTTCTG+TGG 0.645701 2_1:+71256004 Msa0222240:CDS
GATTCATACACAACAAATGG+AGG 0.646565 2_1:+71255953 Msa0222240:CDS
ATATAATCAATATAAATGGG+TGG 0.651864 2_1:+71255352 Msa0222240:CDS
GAGGGCTAAGGAGAATCTTG+TGG 0.656336 2_1:+71256294 Msa0222240:CDS
ATTATTATACCAACACTTAG+GGG 0.657353 2_1:+71253718 Msa0222240:CDS
TGGTGAAGAGCTCTTAACAT+GGG 0.661791 2_1:+71256024 Msa0222240:CDS
CTCGAACTAGTTCAAGACAA+AGG 0.662676 2_1:-71255448 None:intergenic
GGTTGTTACAGAAACAGCAT+GGG 0.662855 2_1:+71253852 Msa0222240:CDS
ACAAATTGTAAAAGCTACAG+GGG 0.665070 2_1:+71253831 Msa0222240:CDS
ATTTCTCTCCTAAGATCCAG+CGG 0.666530 2_1:-71255416 None:intergenic
GTTGCAAGGAATACTAGGAA+AGG 0.669215 2_1:+71256385 Msa0222240:CDS
ATGGTTGAACCCCTAAGTGT+TGG 0.671733 2_1:-71253727 None:intergenic
GAAGAAGGGAGTATCACACT+TGG 0.672182 2_1:-71256061 None:intergenic
AGGTGTTAATATGCATTCTG+GGG 0.675385 2_1:+71256405 Msa0222240:CDS
TATAAATGGGTGGCTACACG+AGG 0.677991 2_1:+71255362 Msa0222240:CDS
ATGAGTTGAAGAATCCGTCA+CGG 0.683468 2_1:-71255976 None:intergenic
GTATTTGTGTTCCATCAATG+TGG 0.691831 2_1:-71252870 None:intergenic
GAACTAGTTCAAGACAAAGG+TGG 0.711572 2_1:-71255445 None:intergenic
TGGCCAACATGTAAAGCATG+AGG 0.724789 2_1:-71253891 None:intergenic
AAAGCCTGCATTATGCACTG+AGG 0.736004 2_1:+71255865 Msa0222240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATATTTTTATAAGATATTA+TGG - chr2_1:71254128-71254147 None:intergenic 10.0%
!! GTAAATATAATCAATATAAA+TGG + chr2_1:71255348-71255367 Msa0222240:CDS 10.0%
!! ATATATATTCCAACAAAAAA+GGG - chr2_1:71252379-71252398 None:intergenic 15.0%
!!! CTTTTCATTTTATTTTTCAT+AGG + chr2_1:71252788-71252807 Msa0222240:intron 15.0%
!! TCTGTTTATTTATGTTTAAA+AGG + chr2_1:71253368-71253387 Msa0222240:intron 15.0%
!!! TTATATACTGAATAGATTTT+AGG + chr2_1:71254355-71254374 Msa0222240:intron 15.0%
!! CTTATAAACAAATATAAACT+TGG - chr2_1:71255491-71255510 None:intergenic 15.0%
!! CTAATTTATTAATTGTTAAC+AGG + chr2_1:71255787-71255806 Msa0222240:intron 15.0%
!! AATGAAATAGCAAAAAAATA+TGG + chr2_1:71256334-71256353 Msa0222240:CDS 15.0%
!! ATGAAATAGCAAAAAAATAT+GGG + chr2_1:71256335-71256354 Msa0222240:CDS 15.0%
!! TTCATATATAAATTAGAGAT+AGG + chr2_1:71256544-71256563 Msa0222240:three_prime_UTR 15.0%
!! CATATATATTCCAACAAAAA+AGG - chr2_1:71252380-71252399 None:intergenic 20.0%
!! AAAAATTGGTTAATGTATTG+TGG - chr2_1:71252588-71252607 None:intergenic 20.0%
!! TCTAGATAACAAGAAAAAAT+TGG - chr2_1:71252602-71252621 None:intergenic 20.0%
!!! GAATTTTGAAAATTATTCGA+GGG - chr2_1:71252717-71252736 None:intergenic 20.0%
!! CTAATTAGTACTAAATAACA+TGG - chr2_1:71252739-71252758 None:intergenic 20.0%
!!! TTAAGGATATTTCGTAATTT+TGG - chr2_1:71253445-71253464 None:intergenic 20.0%
!! GTTATTTATTCTATTATTGC+AGG + chr2_1:71253684-71253703 Msa0222240:intron 20.0%
!!! TCATTTTTCAATATATTCCT+AGG + chr2_1:71253782-71253801 Msa0222240:CDS 20.0%
!! AAATATAATGTATTCACTCT+TGG + chr2_1:71254731-71254750 Msa0222240:intron 20.0%
!! ATATAATCAATATAAATGGG+TGG + chr2_1:71255352-71255371 Msa0222240:CDS 20.0%
!! TATTATTCATCAGAAAAATC+AGG - chr2_1:71256460-71256479 None:intergenic 20.0%
!!! ATTAAACACAGTTTTTCAAA+TGG - chr2_1:71256581-71256600 None:intergenic 20.0%
! GGAATATTTCTCACTTTAAT+TGG + chr2_1:71252345-71252364 Msa0222240:five_prime_UTR 25.0%
! AGAAGAAAAAGCAACAAAAT+TGG - chr2_1:71252410-71252429 None:intergenic 25.0%
! ACACATTCTTGTTCAAATAT+CGG + chr2_1:71252497-71252516 Msa0222240:intron 25.0%
! TGAAGAGAAATTTGATTCTT+TGG + chr2_1:71252636-71252655 Msa0222240:five_prime_UTR 25.0%
! GAAGAGAAATTTGATTCTTT+GGG + chr2_1:71252637-71252656 Msa0222240:five_prime_UTR 25.0%
! AAAATTATTCGAGGGAATTT+AGG - chr2_1:71252709-71252728 None:intergenic 25.0%
!!! GGAATTTTGAAAATTATTCG+AGG - chr2_1:71252718-71252737 None:intergenic 25.0%
!! ATGTTTAGTTTCTTTGTTTG+TGG + chr2_1:71253065-71253084 Msa0222240:intron 25.0%
! ACATAAATAAACAGACTCAT+AGG - chr2_1:71253363-71253382 None:intergenic 25.0%
! TAGTACTTTGATAGACTAAA+CGG - chr2_1:71253549-71253568 None:intergenic 25.0%
! GATTATTATACCAACACTTA+GGG + chr2_1:71253717-71253736 Msa0222240:CDS 25.0%
! ATTATTATACCAACACTTAG+GGG + chr2_1:71253718-71253737 Msa0222240:CDS 25.0%
! GAAAAATGATGAAAAAACGA+AGG - chr2_1:71253771-71253790 None:intergenic 25.0%
! TTTACAATTTGTGATGAAAG+TGG - chr2_1:71253823-71253842 None:intergenic 25.0%
! CATGCTACAAAATAGTAAAA+GGG - chr2_1:71253970-71253989 None:intergenic 25.0%
! AGACTATTTCAAAGAGTTTA+CGG + chr2_1:71254073-71254092 Msa0222240:intron 25.0%
!!! TTAACTTGCTTATCCAAATT+TGG + chr2_1:71254253-71254272 Msa0222240:intron 25.0%
! GAGAAATCAAATTGTCAATA+TGG + chr2_1:71254442-71254461 Msa0222240:CDS 25.0%
!!! TAGAAGTACTTATTGAAGAA+TGG - chr2_1:71254613-71254632 None:intergenic 25.0%
! ATAATCAACTAGATAAAGCA+AGG - chr2_1:71254695-71254714 None:intergenic 25.0%
! GCTAAAAAATGGATATAATG+AGG + chr2_1:71254756-71254775 Msa0222240:intron 25.0%
! AGTATTAATACCTTTCTGTT+TGG + chr2_1:71254788-71254807 Msa0222240:intron 25.0%
!! TTTTCTCATACGATTCAATT+TGG - chr2_1:71255175-71255194 None:intergenic 25.0%
!! TTCAAGTTATATTAGAGGTA+TGG - chr2_1:71255208-71255227 None:intergenic 25.0%
!! CGAAATTCAAGTTATATTAG+AGG - chr2_1:71255213-71255232 None:intergenic 25.0%
! AATATATCAAAGATCGCTAT+GGG - chr2_1:71255528-71255547 None:intergenic 25.0%
! AAAAAAAGATATTCAGTCAG+AGG - chr2_1:71255716-71255735 None:intergenic 25.0%
! ATAGCAAAAAAATATGGGAA+AGG + chr2_1:71256340-71256359 Msa0222240:CDS 25.0%
!!! TTTTGTTGTTTATGGAACAA+GGG + chr2_1:71256363-71256382 Msa0222240:CDS 25.0%
!!! ATTGTGCAATTTGTTTGTTT+TGG + chr2_1:71256513-71256532 Msa0222240:three_prime_UTR 25.0%
ATATTCCAACAAAAAAGGGA+AGG - chr2_1:71252375-71252394 None:intergenic 30.0%
GTTACCATCATTGATATTTG+TGG + chr2_1:71252562-71252581 Msa0222240:intron 30.0%
! TTGATAATCCAAGATCTGAA+AGG + chr2_1:71252676-71252695 Msa0222240:CDS 30.0%
! GTGGGAATTTTTGATATTTC+AGG - chr2_1:71252826-71252845 None:intergenic 30.0%
!!! AGCATTCTTTTGAGACTTTT+TGG - chr2_1:71252908-71252927 None:intergenic 30.0%
AGTGTTAGTATTAGATCCTA+GGG + chr2_1:71253002-71253021 Msa0222240:intron 30.0%
! GAAGAAGTTTGCATTGATAT+TGG + chr2_1:71253120-71253139 Msa0222240:intron 30.0%
! TTATGTTTAAAAGGCCGTTT+TGG + chr2_1:71253377-71253396 Msa0222240:intron 30.0%
!!! TTCGTAATTTTGGCTAACTT+AGG - chr2_1:71253435-71253454 None:intergenic 30.0%
!! ATAACTAGAGACGCTTTTTA+AGG - chr2_1:71253462-71253481 None:intergenic 30.0%
TAAACGATCAAACTATCTAG+CGG - chr2_1:71253509-71253528 None:intergenic 30.0%
!! TATTATTGCAGGTGTTGATT+TGG + chr2_1:71253695-71253714 Msa0222240:intron 30.0%
GGATTATTATACCAACACTT+AGG + chr2_1:71253716-71253735 Msa0222240:CDS 30.0%
TCACAAATTGTAAAAGCTAC+AGG + chr2_1:71253829-71253848 Msa0222240:CDS 30.0%
CACAAATTGTAAAAGCTACA+GGG + chr2_1:71253830-71253849 Msa0222240:CDS 30.0%
ACAAATTGTAAAAGCTACAG+GGG + chr2_1:71253831-71253850 Msa0222240:CDS 30.0%
! TAGCTTGTGATATACTTACA+TGG - chr2_1:71253918-71253937 None:intergenic 30.0%
TATCACAAGCTATATTTCCT+TGG + chr2_1:71253926-71253945 Msa0222240:intron 30.0%
GCATGCTACAAAATAGTAAA+AGG - chr2_1:71253971-71253990 None:intergenic 30.0%
! TGTATTAGCTTATTCAAGCT+TGG + chr2_1:71254029-71254048 Msa0222240:intron 30.0%
AAGATATTATGGAGAGCTTA+TGG - chr2_1:71254117-71254136 None:intergenic 30.0%
!! ATTCTAGTTTAGGCCAAATT+TGG - chr2_1:71254269-71254288 None:intergenic 30.0%
AATTTATGTTCACCAAATGC+CGG + chr2_1:71254532-71254551 Msa0222240:CDS 30.0%
ATAAGTACTTCTATTGTCTC+TGG + chr2_1:71254620-71254639 Msa0222240:intron 30.0%
ATTAATACCTTTCTGTTTGG+AGG + chr2_1:71254791-71254810 Msa0222240:intron 30.0%
TTAATACCTTTCTGTTTGGA+GGG + chr2_1:71254792-71254811 Msa0222240:intron 30.0%
! CTTCTTACTAGCACTTTTAT+CGG + chr2_1:71254836-71254855 Msa0222240:CDS 30.0%
! CACTTTTATCGGAGAAATAA+TGG + chr2_1:71254847-71254866 Msa0222240:CDS 30.0%
! AGAAATAATGGTTGCTATTG+TGG + chr2_1:71254859-71254878 Msa0222240:CDS 30.0%
! CGTGGTTAATTTATTTCTCT+TGG + chr2_1:71254937-71254956 Msa0222240:intron 30.0%
AGAGAAATCATTTCTTACGT+TGG + chr2_1:71254964-71254983 Msa0222240:intron 30.0%
TTCTTACGTTGGATGAAATA+TGG + chr2_1:71254975-71254994 Msa0222240:intron 30.0%
!! ACCTTTCAAACCAGTTTTAT+AGG + chr2_1:71255033-71255052 Msa0222240:intron 30.0%
!! CCTTTCAAACCAGTTTTATA+GGG + chr2_1:71255034-71255053 Msa0222240:intron 30.0%
CTAATTCAACCCTATAAAAC+TGG - chr2_1:71255046-71255065 None:intergenic 30.0%
TCAAAAGCAGATATAAACGA+AGG - chr2_1:71255111-71255130 None:intergenic 30.0%
ATATATCAAAGATCGCTATG+GGG - chr2_1:71255527-71255546 None:intergenic 30.0%
GAATATATCAAAGATCGCTA+TGG - chr2_1:71255529-71255548 None:intergenic 30.0%
GAATTTGACTGTGATTTCTA+TGG - chr2_1:71255551-71255570 None:intergenic 30.0%
GAAATGCTCTTCATAATTAG+AGG + chr2_1:71255923-71255942 Msa0222240:CDS 30.0%
TTGTTGTGTATGAATCAAGA+TGG - chr2_1:71255949-71255968 None:intergenic 30.0%
CTTGATTCATACACAACAAA+TGG + chr2_1:71255950-71255969 Msa0222240:CDS 30.0%
TTCTTCAACTCATGTAGAAT+CGG + chr2_1:71255986-71256005 Msa0222240:CDS 30.0%
GACTACATAGTAAACAACTT+AGG + chr2_1:71256170-71256189 Msa0222240:CDS 30.0%
! TCAGATTTTATTCACACCAA+TGG + chr2_1:71256200-71256219 Msa0222240:CDS 30.0%
!!! GTTTTGTTGTTTATGGAACA+AGG + chr2_1:71256362-71256381 Msa0222240:CDS 30.0%
!! AAAGGTGTTAATATGCATTC+TGG + chr2_1:71256403-71256422 Msa0222240:CDS 30.0%
! AAGGTGTTAATATGCATTCT+GGG + chr2_1:71256404-71256423 Msa0222240:CDS 30.0%
! ATTCTTTGGGAAAACCAGTA+TGG + chr2_1:71252650-71252669 Msa0222240:exon 35.0%
! TTCTTTGGGAAAACCAGTAT+GGG + chr2_1:71252651-71252670 Msa0222240:exon 35.0%
TGGATTATCAAATCCCATAC+TGG - chr2_1:71252667-71252686 None:intergenic 35.0%
TCAAAAATTCCCACAACAAG+TGG + chr2_1:71252832-71252851 Msa0222240:CDS 35.0%
AAGGTGAAATACCACATTGA+TGG + chr2_1:71252859-71252878 Msa0222240:CDS 35.0%
GTATTTGTGTTCCATCAATG+TGG - chr2_1:71252873-71252892 None:intergenic 35.0%
!!! GACTTTTTGGAACTTTGTTC+AGG - chr2_1:71252895-71252914 None:intergenic 35.0%
AGTCTCAAAAGAATGCTACA+AGG + chr2_1:71252911-71252930 Msa0222240:CDS 35.0%
GAGTGTTAGTATTAGATCCT+AGG + chr2_1:71253001-71253020 Msa0222240:intron 35.0%
GTGTTAGTATTAGATCCTAG+GGG + chr2_1:71253003-71253022 Msa0222240:intron 35.0%
ACTGGCAAATAAAAGAACAG+TGG - chr2_1:71253093-71253112 None:intergenic 35.0%
!! ACTGTTCTTTTATTTGCCAG+TGG + chr2_1:71253092-71253111 Msa0222240:intron 35.0%
CTCACAGTTGTTAGATCATT+TGG + chr2_1:71253162-71253181 Msa0222240:intron 35.0%
CCTAAGAGCAATCTTAGAAT+AGG - chr2_1:71253283-71253302 None:intergenic 35.0%
!! CCTATTCTAAGATTGCTCTT+AGG + chr2_1:71253280-71253299 Msa0222240:CDS 35.0%
GCGTCTCTAGTTATTTAGTT+TGG + chr2_1:71253468-71253487 Msa0222240:intron 35.0%
ACTAACAAATGATACGCTCA+AGG + chr2_1:71253565-71253584 Msa0222240:intron 35.0%
CTAACAAATGATACGCTCAA+GGG + chr2_1:71253566-71253585 Msa0222240:intron 35.0%
! GACATTTTTCGTATTTGCCA+TGG - chr2_1:71253749-71253768 None:intergenic 35.0%
GGAAAAATCAAATACAGCCT+AGG - chr2_1:71253802-71253821 None:intergenic 35.0%
TTGTGATATACTTACATGGC+TGG - chr2_1:71253914-71253933 None:intergenic 35.0%
! CCAATTTGTTTGAACAACCA+AGG - chr2_1:71253946-71253965 None:intergenic 35.0%
CCTTGGTTGTTCAAACAAAT+TGG + chr2_1:71253943-71253962 Msa0222240:intron 35.0%
ATTTGGCCTAAACTAGAATG+TGG + chr2_1:71254270-71254289 Msa0222240:intron 35.0%
!! CTCATTCCACATTCTAGTTT+AGG - chr2_1:71254279-71254298 None:intergenic 35.0%
!! AATAGATTTTAGGAGCTTGC+TGG + chr2_1:71254365-71254384 Msa0222240:intron 35.0%
CTTGACGTTCTATTGATAGA+AGG - chr2_1:71254393-71254412 None:intergenic 35.0%
! TTGGAAAAGTGTGTGCAATA+TGG + chr2_1:71254420-71254439 Msa0222240:CDS 35.0%
TATACCAAACGGATAAAAGC+CGG - chr2_1:71254554-71254573 None:intergenic 35.0%
GCATCAGCATATATACCAAA+CGG - chr2_1:71254565-71254584 None:intergenic 35.0%
TTAACCATAATACTTGCCTC+AGG - chr2_1:71254660-71254679 None:intergenic 35.0%
CACTCTTGGAAGCTAAAAAA+TGG + chr2_1:71254745-71254764 Msa0222240:intron 35.0%
! ATTGCTGATTGGTAATATGC+AGG + chr2_1:71254910-71254929 Msa0222240:CDS 35.0%
!! CCCTATAAAACTGGTTTGAA+AGG - chr2_1:71255037-71255056 None:intergenic 35.0%
! GGGTTGAATTAGTTTGAAGA+TGG + chr2_1:71255054-71255073 Msa0222240:intron 35.0%
AAAGAACTGACACAGAACAA+TGG + chr2_1:71255282-71255301 Msa0222240:CDS 35.0%
TCATCCATTTGGTCAAACAA+GGG - chr2_1:71255815-71255834 None:intergenic 35.0%
TTCATCCATTTGGTCAAACA+AGG - chr2_1:71255816-71255835 None:intergenic 35.0%
CTAGCATTCTTTCATCCATT+TGG - chr2_1:71255826-71255845 None:intergenic 35.0%
GATTCATACACAACAAATGG+AGG + chr2_1:71255953-71255972 Msa0222240:CDS 35.0%
TAACTGTTCTTGTGGAAGAA+GGG - chr2_1:71256078-71256097 None:intergenic 35.0%
TTAACTGTTCTTGTGGAAGA+AGG - chr2_1:71256079-71256098 None:intergenic 35.0%
! GAAAGCTTTAACTGTTCTTG+TGG - chr2_1:71256086-71256105 None:intergenic 35.0%
!!! CTTGTTTTATTCAAGCTGCA+TGG + chr2_1:71256236-71256255 Msa0222240:CDS 35.0%
!!! GGGAAAGGTTTTGTTGTTTA+TGG + chr2_1:71256355-71256374 Msa0222240:CDS 35.0%
AGGTGTTAATATGCATTCTG+GGG + chr2_1:71256405-71256424 Msa0222240:CDS 35.0%
TCAGAAAAATCAGGTTCTGT+TGG - chr2_1:71256451-71256470 None:intergenic 35.0%
GTCACACTCCCCTTAAAATA+TGG - chr2_1:71252214-71252233 None:intergenic 40.0%
ATGAACTAGAAACCAGTTGG+AGG - chr2_1:71252283-71252302 None:intergenic 40.0%
CCTATGAACTAGAAACCAGT+TGG - chr2_1:71252286-71252305 None:intergenic 40.0%
!! CCAACTGGTTTCTAGTTCAT+AGG + chr2_1:71252283-71252302 Msa0222240:five_prime_UTR 40.0%
!! TGGTTTCTAGTTCATAGGTG+TGG + chr2_1:71252288-71252307 Msa0222240:five_prime_UTR 40.0%
!! TTTCTAGTTCATAGGTGTGG+AGG + chr2_1:71252291-71252310 Msa0222240:five_prime_UTR 40.0%
GTGGCCACAAATATCAATGA+TGG - chr2_1:71252569-71252588 None:intergenic 40.0%
!! ACCTTAACTCCACTTGTTGT+GGG - chr2_1:71252844-71252863 None:intergenic 40.0%
CAAACTTCTTCTCTAACCAC+TGG - chr2_1:71253111-71253130 None:intergenic 40.0%
TTATGTTGCTCCTTCTTCGA+AGG + chr2_1:71253230-71253249 Msa0222240:CDS 40.0%
CTACCAAAAACCTTCGAAGA+AGG - chr2_1:71253243-71253262 None:intergenic 40.0%
!!! TCTTCGAAGGTTTTTGGTAG+AGG + chr2_1:71253243-71253262 Msa0222240:CDS 40.0%
AGCACATTCAAGGACCAAAA+CGG - chr2_1:71253394-71253413 None:intergenic 40.0%
AGTGACACTGTCGTACATTT+AGG + chr2_1:71253622-71253641 Msa0222240:intron 40.0%
GGTTGTTACAGAAACAGCAT+GGG + chr2_1:71253852-71253871 Msa0222240:CDS 40.0%
CAACCTCATGCTTTACATGT+TGG + chr2_1:71253888-71253907 Msa0222240:CDS 40.0%
! TAGAACGTCAAGAAGCATGT+TGG + chr2_1:71254401-71254420 Msa0222240:CDS 40.0%
GCTATAAACCAAGCTACTCT+CGG - chr2_1:71254499-71254518 None:intergenic 40.0%
TGATGTAACTTCGGAAGTCA+TGG - chr2_1:71254587-71254606 None:intergenic 40.0%
GAATGGCGATGATGTAACTT+CGG - chr2_1:71254596-71254615 None:intergenic 40.0%
AGTACTTCTATTGTCTCTGG+TGG + chr2_1:71254623-71254642 Msa0222240:intron 40.0%
GTACTTCTATTGTCTCTGGT+GGG + chr2_1:71254624-71254643 Msa0222240:intron 40.0%
TACTTCTATTGTCTCTGGTG+GGG + chr2_1:71254625-71254644 Msa0222240:intron 40.0%
! GTACTTTTCGCATTGCTGAT+TGG + chr2_1:71254899-71254918 Msa0222240:CDS 40.0%
CGAAGGATGTATGTGTTTCA+CGG - chr2_1:71255094-71255113 None:intergenic 40.0%
GAGGAAGAAGATCTTCTCAA+AGG + chr2_1:71255389-71255408 Msa0222240:CDS 40.0%
ATTTCTCTCCTAAGATCCAG+CGG - chr2_1:71255419-71255438 None:intergenic 40.0%
GAACTAGTTCAAGACAAAGG+TGG - chr2_1:71255448-71255467 None:intergenic 40.0%
CTCGAACTAGTTCAAGACAA+AGG - chr2_1:71255451-71255470 None:intergenic 40.0%
CTTTGTCTTGAACTAGTTCG+AGG + chr2_1:71255449-71255468 Msa0222240:CDS 40.0%
TGATCTGGATCACAACATCA+AGG - chr2_1:71255615-71255634 None:intergenic 40.0%
AAAGATCTGCGACTATGATC+TGG - chr2_1:71255630-71255649 None:intergenic 40.0%
!! ATGAAGAGCATTTCGTTCAC+TGG - chr2_1:71255917-71255936 None:intergenic 40.0%
! ATGAGTTGAAGAATCCGTCA+CGG - chr2_1:71255979-71255998 None:intergenic 40.0%
TGGTGAAGAGCTCTTAACAT+GGG + chr2_1:71256024-71256043 Msa0222240:CDS 40.0%
ATTCACACCAATGGAGAACT+TGG + chr2_1:71256209-71256228 Msa0222240:CDS 40.0%
TTCACACCAATGGAGAACTT+GGG + chr2_1:71256210-71256229 Msa0222240:CDS 40.0%
TTATTCAAGCTGCATGGAGA+AGG + chr2_1:71256242-71256261 Msa0222240:CDS 40.0%
GAAAGAAGCTGCTGAATTGA+GGG + chr2_1:71256276-71256295 Msa0222240:CDS 40.0%
TTTATGGAACAAGGGTTGCA+AGG + chr2_1:71256371-71256390 Msa0222240:CDS 40.0%
GTTGCAAGGAATACTAGGAA+AGG + chr2_1:71256385-71256404 Msa0222240:CDS 40.0%
ACTATGCATGATGCACTTTG+TGG + chr2_1:71256602-71256621 Msa0222240:three_prime_UTR 40.0%
TATACTGCAACTCCTCCAAC+TGG + chr2_1:71252268-71252287 Msa0222240:five_prime_UTR 45.0%
GATAAGTTGCTTGCAGCAGA+GGG + chr2_1:71252313-71252332 Msa0222240:five_prime_UTR 45.0%
!!! GTGCTCCTTCCCTTTTTTGT+TGG + chr2_1:71252367-71252386 Msa0222240:five_prime_UTR 45.0%
! TCAATGATGGTAACGCGCAA+AGG - chr2_1:71252556-71252575 None:intergenic 45.0%
GAAGCACACCTTTCAGATCT+TGG - chr2_1:71252687-71252706 None:intergenic 45.0%
TCCCACAACAAGTGGAGTTA+AGG + chr2_1:71252840-71252859 Msa0222240:CDS 45.0%
! CACCTTAACTCCACTTGTTG+TGG - chr2_1:71252845-71252864 None:intergenic 45.0%
! GCTCCTTCTTCGAAGGTTTT+TGG + chr2_1:71253237-71253256 Msa0222240:CDS 45.0%
TGCTCTTAGGTACTTCAGCA+AGG + chr2_1:71253293-71253312 Msa0222240:CDS 45.0%
GCTCTTAGGTACTTCAGCAA+GGG + chr2_1:71253294-71253313 Msa0222240:CDS 45.0%
! GGTACTTCAGCAAGGGTTTT+TGG + chr2_1:71253301-71253320 Msa0222240:CDS 45.0%
AACAGACTCATAGGTACCTG+AGG - chr2_1:71253354-71253373 None:intergenic 45.0%
GACGACATCTAGCACATTCA+AGG - chr2_1:71253404-71253423 None:intergenic 45.0%
ATGGTTGAACCCCTAAGTGT+TGG - chr2_1:71253730-71253749 None:intergenic 45.0%
AACACTTAGGGGTTCAACCA+TGG + chr2_1:71253729-71253748 Msa0222240:CDS 45.0%
GGGTTGTTACAGAAACAGCA+TGG + chr2_1:71253851-71253870 Msa0222240:CDS 45.0%
TGGCCAACATGTAAAGCATG+AGG - chr2_1:71253894-71253913 None:intergenic 45.0%
AACGGATAAAAGCCGGCATT+TGG - chr2_1:71254547-71254566 None:intergenic 45.0%
!!! AATGCCGGCTTTTATCCGTT+TGG + chr2_1:71254547-71254566 Msa0222240:CDS 45.0%
ATTGTCTCTGGTGGGGATTA+AGG + chr2_1:71254632-71254651 Msa0222240:intron 45.0%
GGAACCTGAGGCAAGTATTA+TGG + chr2_1:71254653-71254672 Msa0222240:intron 45.0%
! TTTGGAGGGTGCAGTTCTTT+GGG + chr2_1:71254806-71254825 Msa0222240:intron 45.0%
GCTATTGTGGTTGCAACTCT+TGG + chr2_1:71254872-71254891 Msa0222240:CDS 45.0%
TGTGGTTGCAACTCTTGGAT+TGG + chr2_1:71254877-71254896 Msa0222240:CDS 45.0%
TGGTAATATGCAGGTAAGCG+TGG + chr2_1:71254919-71254938 Msa0222240:intron 45.0%
! GACGAACGGTTATCGATTGA+AGG - chr2_1:71255244-71255263 None:intergenic 45.0%
TAACCGTTCGTCTAGAAGAG+TGG + chr2_1:71255252-71255271 Msa0222240:CDS 45.0%
!! ATAGACTCTCGTAGTTCTGG+AGG - chr2_1:71255326-71255345 None:intergenic 45.0%
CGAATAGACTCTCGTAGTTC+TGG - chr2_1:71255329-71255348 None:intergenic 45.0%
TATAAATGGGTGGCTACACG+AGG + chr2_1:71255362-71255381 Msa0222240:CDS 45.0%
! GGTTCCCTTGTTTGACCAAA+TGG + chr2_1:71255808-71255827 Msa0222240:intron 45.0%
AAAGCCTGCATTATGCACTG+AGG + chr2_1:71255865-71255884 Msa0222240:CDS 45.0%
AAGCCTGCATTATGCACTGA+GGG + chr2_1:71255866-71255885 Msa0222240:CDS 45.0%
GGAACTTATCTTGTTCGCGA+AGG + chr2_1:71255887-71255906 Msa0222240:CDS 45.0%
AACTCATGTAGAATCGGTCC+AGG + chr2_1:71255992-71256011 Msa0222240:CDS 45.0%
GTGGTGAAGAGCTCTTAACA+TGG + chr2_1:71256023-71256042 Msa0222240:CDS 45.0%
!! CACACTTGGTCTTGGATCTA+AGG - chr2_1:71256050-71256069 None:intergenic 45.0%
!! GAAGAAGGGAGTATCACACT+TGG - chr2_1:71256064-71256083 None:intergenic 45.0%
! CATGGAGAAGGCACAAGAAA+AGG + chr2_1:71256254-71256273 Msa0222240:CDS 45.0%
GGAAAGAAGCTGCTGAATTG+AGG + chr2_1:71256275-71256294 Msa0222240:CDS 45.0%
CAAGGGTTGCAAGGAATACT+AGG + chr2_1:71256380-71256399 Msa0222240:CDS 45.0%
!! TAAATATAATCAATATAAAT+GGG + chr2_1:71255349-71255368 Msa0222240:CDS 5.0%
GGATAAGTTGCTTGCAGCAG+AGG + chr2_1:71252312-71252331 Msa0222240:five_prime_UTR 50.0%
TGCAGCAGAGGGAAATGCTT+TGG + chr2_1:71252324-71252343 Msa0222240:five_prime_UTR 50.0%
CGATGTATGAGTTGTCCCCT+AGG - chr2_1:71253021-71253040 None:intergenic 50.0%
GGGGACAACTCATACATCGT+TGG + chr2_1:71253022-71253041 Msa0222240:intron 50.0%
CTCATAGGTACCTGAGGAAG+AGG - chr2_1:71253348-71253367 None:intergenic 50.0%
GTTACAGAAACAGCATGGGC+AGG + chr2_1:71253856-71253875 Msa0222240:CDS 50.0%
AAGATGCTCCGAGAGTAGCT+TGG + chr2_1:71254488-71254507 Msa0222240:CDS 50.0%
ACTGCACCCTCCAAACAGAA+AGG - chr2_1:71254801-71254820 None:intergenic 50.0%
! GTTTGGAGGGTGCAGTTCTT+TGG + chr2_1:71254805-71254824 Msa0222240:intron 50.0%
CCTCCACTCTTCTAGACGAA+CGG - chr2_1:71255258-71255277 None:intergenic 50.0%
CGTTCGTCTAGAAGAGTGGA+GGG + chr2_1:71255256-71255275 Msa0222240:CDS 50.0%
TCTTCTCAAAGGACTTCCGC+TGG + chr2_1:71255400-71255419 Msa0222240:CDS 50.0%
AAGGACTTCCGCTGGATCTT+AGG + chr2_1:71255408-71255427 Msa0222240:CDS 50.0%
AGCTGAAGCAGCCACAATCA+CGG + chr2_1:71255571-71255590 Msa0222240:intron 50.0%
TGTCTCCACAACCGTGATTG+TGG - chr2_1:71255585-71255604 None:intergenic 50.0%
GTTCCCTCAGTGCATAATGC+AGG - chr2_1:71255872-71255891 None:intergenic 50.0%
ACAACAAATGGAGGCCGTGA+CGG + chr2_1:71255962-71255981 Msa0222240:CDS 50.0%
TCTTCACCACAGAAATCGCC+TGG - chr2_1:71256013-71256032 None:intergenic 50.0%
!! GGGAGTATCACACTTGGTCT+TGG - chr2_1:71256058-71256077 None:intergenic 50.0%
AAGCAGCCCAAGTTCTCCAT+TGG - chr2_1:71256219-71256238 None:intergenic 50.0%
AGCTGCTGAATTGAGGGCTA+AGG + chr2_1:71256282-71256301 Msa0222240:CDS 50.0%
GAGGGCTAAGGAGAATCTTG+TGG + chr2_1:71256294-71256313 Msa0222240:CDS 50.0%
GAATCTTGTGGCAGCTTCAG+AGG + chr2_1:71256306-71256325 Msa0222240:CDS 50.0%
! TGGTAACGCGCAAAGGCGAT+TGG - chr2_1:71252549-71252568 None:intergenic 55.0%
TGCTGCATTGCCTCTTCCTC+AGG + chr2_1:71253335-71253354 Msa0222240:CDS 55.0%
GGTGGGGATTAAGGAACCTG+AGG + chr2_1:71254641-71254660 Msa0222240:intron 55.0%
!! GGGTGCAGTTCTTTGGGACA+AGG + chr2_1:71254812-71254831 Msa0222240:intron 55.0%
CCGTTCGTCTAGAAGAGTGG+AGG + chr2_1:71255255-71255274 Msa0222240:CDS 55.0%
AGCAGCCACAATCACGGTTG+TGG + chr2_1:71255577-71255596 Msa0222240:intron 55.0%
ATCGGTCCAGGCGATTTCTG+TGG + chr2_1:71256004-71256023 Msa0222240:CDS 55.0%
GGTGGCTACACGAGGAGTAG+AGG + chr2_1:71255370-71255389 Msa0222240:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 71252210 71256634 71252210 ID=Msa0222240;Name=Msa0222240
chr2_1 mRNA 71252210 71256634 71252210 ID=Msa0222240-mRNA-1;Parent=Msa0222240;Name=Msa0222240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=237|0.75|0.66|1|0.87|0.77|9|157|614
chr2_1 exon 71252210 71252398 71252210 ID=Msa0222240-mRNA-1:exon:20474;Parent=Msa0222240-mRNA-1
chr2_1 exon 71252621 71252697 71252621 ID=Msa0222240-mRNA-1:exon:20475;Parent=Msa0222240-mRNA-1
chr2_1 exon 71252810 71252990 71252810 ID=Msa0222240-mRNA-1:exon:20476;Parent=Msa0222240-mRNA-1
chr2_1 exon 71253207 71253356 71253207 ID=Msa0222240-mRNA-1:exon:20477;Parent=Msa0222240-mRNA-1
chr2_1 exon 71253706 71253918 71253706 ID=Msa0222240-mRNA-1:exon:20478;Parent=Msa0222240-mRNA-1
chr2_1 exon 71254370 71254623 71254370 ID=Msa0222240-mRNA-1:exon:20479;Parent=Msa0222240-mRNA-1
chr2_1 exon 71254820 71254931 71254820 ID=Msa0222240-mRNA-1:exon:20480;Parent=Msa0222240-mRNA-1
chr2_1 exon 71255236 71255472 71255236 ID=Msa0222240-mRNA-1:exon:20481;Parent=Msa0222240-mRNA-1
chr2_1 exon 71255809 71256634 71255809 ID=Msa0222240-mRNA-1:exon:20482;Parent=Msa0222240-mRNA-1
chr2_1 five_prime_UTR 71252210 71252398 71252210 ID=Msa0222240-mRNA-1:five_prime_utr;Parent=Msa0222240-mRNA-1
chr2_1 five_prime_UTR 71252621 71252668 71252621 ID=Msa0222240-mRNA-1:five_prime_utr;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71252669 71252697 71252669 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71252810 71252990 71252810 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71253207 71253356 71253207 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71253706 71253918 71253706 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71254370 71254623 71254370 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71254820 71254931 71254820 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71255236 71255472 71255236 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 CDS 71255809 71256477 71255809 ID=Msa0222240-mRNA-1:cds;Parent=Msa0222240-mRNA-1
chr2_1 three_prime_UTR 71256478 71256634 71256478 ID=Msa0222240-mRNA-1:three_prime_utr;Parent=Msa0222240-mRNA-1
Gene Sequence

>Msa0222240

ATGGGATTTGATAATCCAAGATCTGAAAGGTTTGAAGATGATCCTGAAATATCAAAAATTCCCACAACAAGTGGAGTTAAGGTGAAATACCACATTGATGGAACACAAATACCTGAACAAAGTTCCAAAAAGTCTCAAAAGAATGCTACAAGGAACAAGTTTTTGAAAACAAGAGTATTGTCAAGAGTATTCTCAGAAGACTATGAAAGAATTTGTATGAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCGAAGGTTTTTGGTAGAGGAGAACTTGTTCTTACCTATTCTAAGATTGCTCTTAGGTACTTCAGCAAGGGTTTTTGGTTAGACTCTATTGCTGCATTGCCTCTTCCTCAGGTGTTGATTTGGATTATTATACCAACACTTAGGGGTTCAACCATGGCAAATACGAAAAATGTCCTTCGTTTTTTCATCATTTTTCAATATATTCCTAGGCTGTATTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTTACAGAAACAGCATGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCCAGCCATATTTTAGGAGCTTGCTGGTACCTTCTATCAATAGAACGTCAAGAAGCATGTTGGAAAAGTGTGTGCAATATGGAGAAATCAAATTGTCAATATGGATTCTTCAATTGTCACAGTGTTAAAGATGCTCCGAGAGTAGCTTGGTTTATAGCTAGTAATGTCACAAATTTATGTTCACCAAATGCCGGCTTTTATCCGTTTGGTATATATGCTGATGCCATGACTTCCGAAGTTACATCATCGCCATTCTTCAATAATTCTTTGGGACAAGGTCTTCTTACTAGCACTTTTATCGGAGAAATAATGGTTGCTATTGTGGTTGCAACTCTTGGATTGGTACTTTTCGCATTGCTGATTGGTAATATGCAGACATACCTTCAATCGATAACCGTTCGTCTAGAAGAGTGGAGGGTGAAAAGAACTGACACAGAACAATGGATGCATCACAGACAACTACCTCCAGAACTACGAGAGTCTATTCGTAAATATAATCAATATAAATGGGTGGCTACACGAGGAGTAGAGGAAGAAGATCTTCTCAAAGGACTTCCGCTGGATCTTAGGAGAGAAATCAAACGCCACCTTTGTCTTGAACTAGTTCGAGGAGTTCCCTTGTTTGACCAAATGGATGAAAGAATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTATGCACTGAGGGAACTTATCTTGTTCGCGAAGGCGATCCAGTGAACGAAATGCTCTTCATAATTAGAGGCCATCTTGATTCATACACAACAAATGGAGGCCGTGACGGATTCTTCAACTCATGTAGAATCGGTCCAGGCGATTTCTGTGGTGAAGAGCTCTTAACATGGGCCTTAGATCCAAGACCAAGTGTGATACTCCCTTCTTCCACAAGAACAGTTAAAGCTTTCTCAGAAGTAGAAGCTTTTGCACTTATAGCTGAAGATCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTCAGATTTTATTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTGAGGGCTAAGGAGAATCTTGTGGCAGCTTCAGAGGCTGAAAATGAAATAGCAAAAAAATATGGGAAAGGTTTTGTTGTTTATGGAACAAGGGTTGCAAGGAATACTAGGAAAGGTGTTAATATGCATTCTGGGGTAGTAAGCTCTTTGCAGAAACCAACAGAACCTGATTTTTCTGATGAATAA
Protein sequence

>Msa0222240

MGFDNPRSERFEDDPEISKIPTTSGVKVKYHIDGTQIPEQSSKKSQKNATRNKFLKTRVLSRVFSEDYERICMKFRTAYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDSIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKSNCQYGFFNCHSVKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSEVTSSPFFNNSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAENEIAKKYGKGFVVYGTRVARNTRKGVNMHSGVVSSLQKPTEPDFSDE*