AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716890 MtrunA17_Chr5g0404841 98.814 843 10 0 1 843 1 843 0.0 1744
Msa0716890 MtrunA17_Chr8g0372421 83.570 846 136 2 1 843 1 846 0.0 1508
Msa0716890 MtrunA17_Chr8g0342001 64.062 832 294 4 9 837 8 837 0.0 1147
Msa0716890 MtrunA17_Chr2g0330291 65.446 819 278 4 22 837 24 840 0.0 1141
Msa0716890 MtrunA17_Chr3g0142001 71.487 733 205 3 1 730 1 732 0.0 1126
Msa0716890 MtrunA17_Chr1g0155701 72.840 729 193 3 1 725 1 728 0.0 1125
Msa0716890 MtrunA17_Chr1g0152571 63.314 706 254 5 22 724 27 730 0.0 957
Msa0716890 MtrunA17_Chr2g0299161 60.331 726 284 4 1 724 3 726 0.0 938
Msa0716890 MtrunA17_Chr2g0326481 55.836 831 334 12 24 838 20 833 0.0 923
Msa0716890 MtrunA17_Chr4g0029301 54.279 853 359 13 1 837 1 838 0.0 905
Msa0716890 MtrunA17_Chr8g0378221 49.072 862 387 12 25 843 49 901 0.0 827
Msa0716890 MtrunA17_Chr3g0130711 53.270 734 325 6 9 726 5 736 0.0 793
Msa0716890 MtrunA17_Chr2g0301001 46.525 849 412 11 6 838 7 829 0.0 773
Msa0716890 MtrunA17_Chr5g0408371 46.939 833 394 13 25 837 27 831 0.0 755
Msa0716890 MtrunA17_Chr5g0406921 46.209 831 408 13 19 837 21 824 0.0 744
Msa0716890 MtrunA17_Chr3g0145581 42.757 856 439 14 4 838 2 827 0.0 722
Msa0716890 MtrunA17_Chr4g0037031 43.240 858 439 16 1 838 4 833 0.0 719
Msa0716890 MtrunA17_Chr3g0130721 49.581 716 326 8 25 734 26 712 0.0 693
Msa0716890 MtrunA17_Chr3g0077531 46.299 743 379 9 1 729 1 737 0.0 673
Msa0716890 MtrunA17_Chr3g0124931 49.381 727 309 17 8 720 6 687 0.0 663
Msa0716890 MtrunA17_Chr2g0326491 54.511 521 182 5 1 471 1 516 0.0 592
Msa0716890 MtrunA17_Chr2g0326451 47.672 537 244 13 322 838 25 544 4.32e-153 459
Msa0716890 MtrunA17_Chr2g0326441 67.164 268 88 0 24 291 20 287 4.26e-136 407
Msa0716890 MtrunA17_Chr2g0326521 44.838 339 146 11 509 838 1 307 4.83e-77 252
Msa0716890 MtrunA17_Chr4g0071281 49.787 235 112 4 497 730 29 258 8.49e-66 220
Msa0716890 MtrunA17_Chr8g0372581 56.429 140 42 2 147 286 9 129 1.18e-43 154
Msa0716890 MtrunA17_Chr4g0071291 57.377 122 20 1 26 147 22 111 1.03e-39 143
Msa0716890 MtrunA17_Chr5g0405781 42.132 197 84 4 156 351 35 202 2.03e-39 149
Msa0716890 MtrunA17_Chr5g0405781 34.211 114 72 2 691 801 237 350 3.20e-13 72.0
Msa0716890 MtrunA17_Chr2g0307981 32.047 337 185 9 400 727 7 308 2.09e-37 143
Msa0716890 MtrunA17_Chr2g0330191 31.722 331 183 9 36 334 64 383 4.78e-35 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716890 AT4G36360.1 78.683 835 172 2 9 842 21 850 0.0 1436
Msa0716890 AT4G36360.2 78.563 835 172 3 9 842 21 849 0.0 1431
Msa0716890 AT3G13750.1 65.542 830 281 4 12 838 20 847 0.0 1147
Msa0716890 AT1G45130.1 70.897 725 207 3 6 726 8 732 0.0 1103
Msa0716890 AT1G45130.2 70.938 640 185 1 88 726 14 653 0.0 986
Msa0716890 AT3G52840.2 62.017 724 266 7 7 725 61 780 0.0 949
Msa0716890 AT3G52840.1 62.017 724 266 7 7 725 7 726 0.0 947
Msa0716890 AT2G28470.1 56.919 831 334 14 24 838 30 852 0.0 944
Msa0716890 AT2G28470.3 56.919 831 334 14 24 838 30 852 0.0 944
Msa0716890 AT2G28470.2 56.919 831 334 14 24 838 24 846 0.0 943
Msa0716890 AT2G28470.4 56.919 831 334 14 24 838 24 846 0.0 943
Msa0716890 AT4G26140.1 61.581 721 268 8 9 725 12 727 0.0 939
Msa0716890 AT5G56870.1 62.117 718 265 7 9 724 12 724 0.0 934
Msa0716890 AT4G26140.7 59.651 746 267 9 9 725 12 752 0.0 926
Msa0716890 AT4G26140.9 59.494 711 254 9 9 690 12 717 0.0 878
Msa0716890 AT2G32810.1 49.141 873 398 14 8 840 13 879 0.0 840
Msa0716890 AT2G28470.5 58.555 678 261 10 24 688 30 700 0.0 811
Msa0716890 AT2G32810.2 49.581 835 375 14 8 802 13 841 0.0 808
Msa0716890 AT4G26140.6 61.912 617 227 7 9 622 12 623 0.0 805
Msa0716890 AT4G26140.3 61.626 615 230 6 9 622 12 621 0.0 805
Msa0716890 AT4G26140.2 61.626 615 230 6 9 622 12 621 0.0 805
Msa0716890 AT5G63810.1 52.710 738 335 6 3 728 6 741 0.0 787
Msa0716890 AT5G20710.1 47.703 849 401 14 3 837 7 826 0.0 776
Msa0716890 AT1G77410.1 48.009 854 384 14 6 838 1 815 0.0 771
Msa0716890 AT1G77410.3 47.730 859 384 15 6 838 1 820 0.0 765
Msa0716890 AT1G31740.1 46.310 840 372 16 11 837 6 779 0.0 733
Msa0716890 AT4G26140.8 63.469 542 191 6 9 547 12 549 0.0 722
Msa0716890 AT4G26140.4 60.847 567 190 7 9 547 12 574 0.0 709
Msa0716890 AT4G26140.5 60.847 567 190 7 9 547 12 574 0.0 709
Msa0716890 AT2G16730.1 42.635 835 434 17 25 843 43 848 0.0 697
Msa0716890 AT5G63800.1 48.831 727 340 8 13 735 19 717 0.0 689
Msa0716890 AT4G35010.1 41.908 828 442 15 24 838 39 840 0.0 679
Msa0716890 AT1G77410.2 47.260 730 329 13 126 838 19 709 0.0 630
Msa0716890 AT1G77410.4 47.260 730 329 13 126 838 19 709 0.0 630
Msa0716890 AT4G38590.1 41.384 795 425 16 56 837 1 767 0.0 630
Msa0716890 AT4G38590.2 39.649 855 455 21 10 837 11 831 0.0 617
Msa0716890 AT5G20710.2 43.827 648 323 13 204 837 1 621 1.07e-179 531
Msa0716890 AT2G04060.1 36.512 367 159 7 291 657 23 315 9.14e-60 211
Msa0716890 AT1G72990.3 34.431 334 174 11 36 336 18 339 1.62e-43 168
Msa0716890 AT1G72990.1 34.431 334 174 11 36 336 73 394 2.14e-43 168
Msa0716890 AT1G72990.4 34.431 334 174 11 36 336 73 394 2.14e-43 168
Msa0716890 AT1G72990.2 34.505 313 160 11 57 336 32 332 5.95e-39 154
Msa0716890 AT2G04062.1 39.344 183 70 3 26 198 7 158 5.57e-31 119
Msa0716890 AT3G53080.1 37.349 83 50 2 756 837 71 152 2.24e-13 68.9
Msa0716890 AT3G53075.1 34.118 85 55 1 756 840 82 165 3.49e-13 68.9
Msa0716890 AT3G53075.2 34.118 85 55 1 756 840 112 195 5.02e-13 69.3

Find 260 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTAACTTGAACCTAATT+TGG 0.113203 5_1:-10488977 None:intergenic
GTTTGTGCTGAATGGAATTT+TGG 0.144864 5_1:+10483955 Msa0716890:CDS
AACTAATCAGCTCCTTTAAT+TGG 0.169265 5_1:-10488267 None:intergenic
TCCAAAGCTTGCAAATTTAA+TGG 0.170398 5_1:-10487848 None:intergenic
CTCCGACTATTTCCAATTAA+AGG 0.188597 5_1:+10488255 Msa0716890:CDS
ACTGCAAATTACACTTAAAA+AGG 0.189109 5_1:-10488300 None:intergenic
TGTAGGCTTGTAGGGTTTAT+TGG 0.193151 5_1:-10485035 None:intergenic
TTCATCAATGGTCGACTTTC+CGG 0.199118 5_1:+10486626 Msa0716890:CDS
AGACATTGCTTAAGAAATTA+TGG 0.222061 5_1:+10483381 Msa0716890:exon
TATCATGGAGGAACAAATTT+TGG 0.222886 5_1:+10485362 Msa0716890:CDS
TCCATTAAATTTGCAAGCTT+TGG 0.229371 5_1:+10487847 Msa0716890:CDS
CAAAAGACCTGTTCAGGATT+TGG 0.234447 5_1:+10485197 Msa0716890:CDS
AAATATTGACAGGTTTAATT+AGG 0.244908 5_1:+10485642 Msa0716890:intron
AAAGGTCAAATATGGATTAA+TGG 0.245950 5_1:+10487380 Msa0716890:CDS
ACTGTATCAAACAGTAATTT+TGG 0.253526 5_1:+10488179 Msa0716890:CDS
TTACAATGCAAGTGAACTTT+TGG 0.264877 5_1:-10487805 None:intergenic
AGTAAATTAAACTCCAAATT+AGG 0.266156 5_1:+10488964 Msa0716890:three_prime_UTR
CATACATCTGGGGTGCTTCT+AGG 0.279927 5_1:-10483547 None:intergenic
CATCACTCTTGCAGAAGATT+TGG 0.288417 5_1:-10485915 None:intergenic
TGTCCACATTGTAGGCTTGT+AGG 0.299295 5_1:-10485044 None:intergenic
TATGAGCTGGGCTGCGAAAA+TGG 0.313804 5_1:+10484794 Msa0716890:CDS
TCATAGCTGGTAGTGATAAA+AGG 0.315613 5_1:-10485401 None:intergenic
GTAGGCTTGTAGGGTTTATT+GGG 0.318414 5_1:-10485034 None:intergenic
GGGTTAAGGTTATGGACTTA+TGG 0.318952 5_1:-10483223 None:intergenic
TAATTGAAACCTATGTGTTT+TGG 0.325172 5_1:+10483716 Msa0716890:CDS
AGTCTCATTGTTCAGTCAAC+TGG 0.328435 5_1:+10486587 Msa0716890:CDS
TTGTGTCGAGAGTGTGAATT+TGG 0.329108 5_1:+10488853 Msa0716890:three_prime_UTR
TTAATTAGGCAACCAAAGTA+TGG 0.330593 5_1:+10485656 Msa0716890:CDS
TAAACTTCCAACAAACTTCA+TGG 0.330837 5_1:-10489015 None:intergenic
GGGATACAAGTGATTATCTT+TGG 0.333315 5_1:+10486331 Msa0716890:CDS
AATGTAACCATGAAGTTTGT+TGG 0.336158 5_1:+10489008 Msa0716890:three_prime_UTR
GTATGGGTAAAGGTCAAATA+TGG 0.336417 5_1:+10487372 Msa0716890:CDS
GCCAATGGCTCTTCTCCTTC+AGG 0.337603 5_1:-10487335 None:intergenic
TCTTTGGCCATTGATGATAA+TGG 0.338833 5_1:-10483494 None:intergenic
GTTTGGCTCAAGTATGTTCC+TGG 0.341896 5_1:+10484085 Msa0716890:CDS
CTCCAAATTAGGTTCAAGTT+AGG 0.342317 5_1:+10488975 Msa0716890:three_prime_UTR
AGAGCCATTGGCATTGGATA+TGG 0.351123 5_1:+10487346 Msa0716890:CDS
AAGGTCAAATATGGATTAAT+GGG 0.354570 5_1:+10487381 Msa0716890:CDS
TGGTGAAGGGGTTAAGGTTA+TGG 0.356787 5_1:-10483231 None:intergenic
ACAAACTTCATGGTTACATT+AGG 0.359376 5_1:-10489005 None:intergenic
CAGGACTATATGCTCATCTA+AGG 0.363152 5_1:+10483920 Msa0716890:CDS
CAAGCCTCTGTCCACATTGT+AGG 0.368026 5_1:-10485052 None:intergenic
CAAAGCTAAAGAAGGAGGTT+TGG 0.371203 5_1:+10483690 Msa0716890:CDS
ACAAGACAATGAACCTTTCA+AGG 0.379762 5_1:+10484120 Msa0716890:CDS
TGTTATCCATGGACTTGATA+AGG 0.380836 5_1:+10486982 Msa0716890:CDS
TTTCCTAATGAGGTAACAAC+TGG 0.386087 5_1:-10485740 None:intergenic
AATTGGCACATTGATAGTTA+TGG 0.387493 5_1:+10487760 Msa0716890:CDS
CATTGATAGTTATGGAAAAT+CGG 0.389751 5_1:+10487768 Msa0716890:CDS
CTGAAATTGCCTTTGTTCCC+AGG 0.392539 5_1:-10488916 None:intergenic
TGCGAAAATGGCTGTTGAAA+TGG 0.393313 5_1:+10484806 Msa0716890:CDS
AATAGTAATAAGAGTAGAAT+AGG 0.395906 5_1:+10488347 Msa0716890:three_prime_UTR
CACACCTGAGAGAGGATTAT+AGG 0.398665 5_1:-10484559 None:intergenic
ACACCTGAGAGAGGATTATA+GGG 0.401661 5_1:-10484558 None:intergenic
TGGATTTGTCTTGGCAGAAA+TGG 0.404305 5_1:+10487011 Msa0716890:CDS
GTCCACATTGTAGGCTTGTA+GGG 0.404490 5_1:-10485043 None:intergenic
GACCCAGTTGTTACCTCATT+AGG 0.404591 5_1:+10485737 Msa0716890:CDS
AAAGAGAGAGTATGTGGAAA+AGG 0.405181 5_1:-10483284 None:intergenic
GTAGCCCGATTTATACAAAA+AGG 0.406520 5_1:+10485228 Msa0716890:CDS
ATCATCCTAATCTTAAGAAT+TGG 0.406667 5_1:+10487743 Msa0716890:CDS
AATAACTGCTTCTGGTCTCT+TGG 0.406686 5_1:+10486290 Msa0716890:CDS
TGAAAGTGAAGTACATTTCC+AGG 0.408233 5_1:-10483757 None:intergenic
TATGTATACACCACAGAGTC+TGG 0.408684 5_1:+10485860 Msa0716890:CDS
AATGTTCATGAACCTTCTCC+TGG 0.408807 5_1:+10483739 Msa0716890:CDS
TGAGAATGGTGAAGGGGTTA+AGG 0.412887 5_1:-10483237 None:intergenic
GAGAACCTCTCACTATTTGT+AGG 0.413141 5_1:-10486222 None:intergenic
GAAACCAGGGGTCTAAGAAT+TGG 0.414239 5_1:+10488826 Msa0716890:three_prime_UTR
AGAATGCTTACCACTGGATC+TGG 0.416491 5_1:-10484870 None:intergenic
GCAACTACAATAACTGCTTC+TGG 0.416767 5_1:+10486282 Msa0716890:CDS
TGCAAATTTAATGGAAGAGA+TGG 0.418486 5_1:-10487839 None:intergenic
ATAAATAAACTTACCATCGC+TGG 0.418837 5_1:-10487514 None:intergenic
ATGGCTGTTGAAATGGGAAC+TGG 0.419005 5_1:+10484813 Msa0716890:CDS
AATTCACAAAAGACCTGTTC+AGG 0.419782 5_1:+10485191 Msa0716890:CDS
GTTATCCATGGACTTGATAA+GGG 0.420565 5_1:+10486983 Msa0716890:CDS
AAAACAGCATTTCTACAATC+CGG 0.424631 5_1:-10485986 None:intergenic
GGAACATACTTGAGCCAAAC+AGG 0.425899 5_1:-10484082 None:intergenic
GATGCTCCACTAGATGAATA+TGG 0.428275 5_1:+10485428 Msa0716890:CDS
GGATAAGTATCGGAAGATAC+TGG 0.430719 5_1:+10487402 Msa0716890:CDS
TTGGCTATAATTATATGAGC+TGG 0.432960 5_1:+10484781 Msa0716890:CDS
CTCATATAATTATAGCCAAC+AGG 0.433077 5_1:-10484777 None:intergenic
CACAGAGTCTGGAGATTGTT+CGG 0.434462 5_1:+10485871 Msa0716890:CDS
CATATCAAACTAAAACATAT+AGG 0.434925 5_1:-10488891 None:intergenic
TCAAACTAAAACATATAGGC+TGG 0.436025 5_1:-10488887 None:intergenic
AACCCCTTCACCATTCTCAT+AGG 0.440252 5_1:+10483241 Msa0716890:five_prime_UTR
TCCTTTAGATGACCATACTT+TGG 0.441192 5_1:-10485668 None:intergenic
ATCACAATAAAAGCCATTGC+AGG 0.441306 5_1:-10485002 None:intergenic
GACTGGGGCGCTTGCCTCCA+TGG 0.441580 5_1:-10486568 None:intergenic
GGCATTGGATATGGACGGTA+TGG 0.441790 5_1:+10487355 Msa0716890:CDS
GGTACCATGTACCGCGATCT+TGG 0.443450 5_1:+10487608 Msa0716890:intron
TCAAGTCCATGGATAACAAC+TGG 0.444007 5_1:-10486977 None:intergenic
GATACAGTTACTATGCATCT+TGG 0.447161 5_1:-10488164 None:intergenic
ATGTGCCAATTCTTAAGATT+AGG 0.447730 5_1:-10487748 None:intergenic
AGAGTATGTGGAAAAGGAAA+AGG 0.449883 5_1:-10483278 None:intergenic
GTCTGGAGATGCAAGATTCA+TGG 0.451253 5_1:-10487142 None:intergenic
GACCTTATGTTTGTGCTGAA+TGG 0.451811 5_1:+10483947 Msa0716890:CDS
TGCAATGACTGCAACTATGC+CGG 0.452021 5_1:+10487446 Msa0716890:CDS
GCAAATGCCAAATCCTGAAC+AGG 0.454857 5_1:-10485204 None:intergenic
GCAAGCTTTGGAACTCCGTT+GGG 0.457912 5_1:+10487859 Msa0716890:CDS
CTCATTAGGAAACTTCCAAC+AGG 0.461938 5_1:+10485751 Msa0716890:CDS
AGAGAGAAAGAGAGAGTATG+TGG 0.462125 5_1:-10483290 None:intergenic
ACTTCGTTCATGCAGTATCA+TGG 0.463350 5_1:+10485347 Msa0716890:intron
TGGACTTGATAAGGGAAAGT+TGG 0.464816 5_1:+10486991 Msa0716890:CDS
GTTCACTTGCATTGTAATCC+TGG 0.466125 5_1:+10487811 Msa0716890:CDS
AAACAACTGAGAACAATGTA+AGG 0.466165 5_1:-10483444 None:intergenic
TGCAAGCTTTGGAACTCCGT+TGG 0.468131 5_1:+10487858 Msa0716890:CDS
TAGGTGGACATTTCGAGACT+TGG 0.469028 5_1:+10486936 Msa0716890:CDS
TTGAAAACAGGTTCTGCCTA+TGG 0.473721 5_1:+10486720 Msa0716890:intron
TTCCATTCAGCACAAACATA+AGG 0.476231 5_1:-10483949 None:intergenic
AGTTGACTGAACAATGAGAC+TGG 0.484163 5_1:-10486585 None:intergenic
TTTCAGATTGAGAACGAGTA+CGG 0.484235 5_1:+10484732 Msa0716890:intron
TTAAGCAATGTCTCTTGTTG+TGG 0.486485 5_1:-10483371 None:intergenic
AAATGGGAACTGGGGTTCCA+TGG 0.487177 5_1:+10484823 Msa0716890:CDS
ATTATCTTTGGTATATAACT+AGG 0.491695 5_1:+10486343 Msa0716890:CDS
AGGGAAAGTTGGATTTGTCT+TGG 0.493325 5_1:+10487002 Msa0716890:CDS
ATGGAAGAGATGGCTTGGCC+AGG 0.493929 5_1:-10487829 None:intergenic
AGAAAAGCCATTATCATCAA+TGG 0.494313 5_1:+10483487 Msa0716890:CDS
CTGTTGGAAGTTTCCTAATG+AGG 0.496460 5_1:-10485750 None:intergenic
GCGAAAATGGCTGTTGAAAT+GGG 0.500883 5_1:+10484807 Msa0716890:CDS
GGAACTCCGTTGGGAACCTG+TGG 0.501954 5_1:+10487868 Msa0716890:CDS
ACTTGGAACACAGGAATCCT+AGG 0.504422 5_1:+10486953 Msa0716890:CDS
CCACAACCAAGCTGGCACTT+TGG 0.504726 5_1:-10487482 None:intergenic
AGACCTCCAAAGTGCCAGCT+TGG 0.504856 5_1:+10487476 Msa0716890:CDS
CCTATCCTCCCTCGTTCCAT+AGG 0.507305 5_1:-10486736 None:intergenic
GGGTCCAATTCTTAGACCCC+TGG 0.507366 5_1:-10488830 None:intergenic
AGGAGAAGAGCCATTGGCAT+TGG 0.507392 5_1:+10487340 Msa0716890:CDS
TGGCCCTATAATCCTCTCTC+AGG 0.507906 5_1:+10484555 Msa0716890:CDS
GCTTTGCTCAGTGTTGCTGT+TGG 0.508572 5_1:+10486810 Msa0716890:CDS
CCAAAGTGCCAGCTTGGTTG+TGG 0.508774 5_1:+10487482 Msa0716890:CDS
GATAACCGCTTCAATACATT+CGG 0.508800 5_1:-10488215 None:intergenic
CTATATGCTCATCTAAGGAT+TGG 0.509830 5_1:+10483925 Msa0716890:CDS
TCATCTAAAGGAGCTTCATA+AGG 0.510452 5_1:+10485679 Msa0716890:CDS
ACTTTCCCTTATCAAGTCCA+TGG 0.511804 5_1:-10486988 None:intergenic
AGTAAAATGCTCGGACCTGT+TGG 0.512159 5_1:+10484762 Msa0716890:CDS
AATAGTTGAATCTGAAACCA+GGG 0.512197 5_1:+10488813 Msa0716890:three_prime_UTR
GGGTTCACTGAGAAAATTGT+GGG 0.515564 5_1:+10484496 Msa0716890:CDS
CGAACGTCTCTATGAGTCAC+AGG 0.517270 5_1:+10484531 Msa0716890:CDS
TTCAGATTGAGAACGAGTAC+GGG 0.518121 5_1:+10484733 Msa0716890:intron
AAACAGCATTTCTACAATCC+GGG 0.519384 5_1:-10485985 None:intergenic
TGAAGTACATTTCCAGGAGA+AGG 0.519659 5_1:-10483751 None:intergenic
CTAGGTCCAGTTGTTATCCA+TGG 0.519979 5_1:+10486971 Msa0716890:CDS
TCTAAACAGGTTGGGCTGAA+AGG 0.520731 5_1:+10487114 Msa0716890:intron
GTCTCATTGTTCAGTCAACT+GGG 0.522806 5_1:+10486588 Msa0716890:CDS
GATATGGACGGTATGGGTAA+AGG 0.524506 5_1:+10487362 Msa0716890:CDS
CCTATGGAACGAGGGAGGAT+AGG 0.527657 5_1:+10486736 Msa0716890:CDS
ATCTTATGACATCCTAGAGC+AGG 0.529494 5_1:+10487924 Msa0716890:CDS
GTTGTAGCAGAGTCAAATGT+AGG 0.529585 5_1:-10483349 None:intergenic
GCGCTTGCCTCCATGGAGAA+AGG 0.529626 5_1:-10486561 None:intergenic
GTGGTCCGTCAGCATCCTCC+CGG 0.529747 5_1:+10485967 Msa0716890:CDS
TCCTTGCTCGTAACTCCCAC+AGG 0.529981 5_1:-10487884 None:intergenic
CAACCAAGCTGGCACTTTGG+AGG 0.531177 5_1:-10487479 None:intergenic
TGGATTAATGGGATAAGTAT+CGG 0.531326 5_1:+10487392 Msa0716890:CDS
TAAACTTACCATCGCTGGGT+TGG 0.532963 5_1:-10487509 None:intergenic
TCATCTGAATCCTTTCTCCA+TGG 0.533331 5_1:+10486551 Msa0716890:CDS
GGCGATGTAAATCTTCGTGC+TGG 0.533335 5_1:+10486774 Msa0716890:CDS
CTCTCACCATATTCATCTAG+TGG 0.534089 5_1:-10485434 None:intergenic
CTCCTTTAATTGGAAATAGT+CGG 0.534842 5_1:-10488257 None:intergenic
GTATGTGGAAAAGGAAAAGG+AGG 0.535574 5_1:-10483275 None:intergenic
TGAAATTGCCTTTGTTCCCA+GGG 0.535771 5_1:-10488915 None:intergenic
ATTCAGACAGTGCATAAAGC+AGG 0.537187 5_1:+10483901 Msa0716890:CDS
ATTTAATGGAAGAGATGGCT+TGG 0.537298 5_1:-10487834 None:intergenic
TACTGGACTGCTATAGCTAC+TGG 0.538077 5_1:+10487419 Msa0716890:CDS
AATTAGGTTCAAGTTAGGAA+TGG 0.539746 5_1:+10488980 Msa0716890:three_prime_UTR
CAAATAGTGAGAGGTTCTCA+TGG 0.540874 5_1:+10486226 Msa0716890:CDS
GGTGCTTCTAGGATAATGTA+TGG 0.542014 5_1:-10483536 None:intergenic
TCAACCAAGATCGCGGTACA+TGG 0.542151 5_1:-10487612 None:intergenic
TGGAGCATCATAATCATAGC+TGG 0.543197 5_1:-10485414 None:intergenic
AAATTCACACTCTCGACACA+AGG 0.547363 5_1:-10488851 None:intergenic
TCTTGTCTAAAGCTTATGCC+AGG 0.547655 5_1:-10484103 None:intergenic
CTACAATGTGGACAGAGGCT+TGG 0.548782 5_1:+10485053 Msa0716890:CDS
TAAATAAACTTACCATCGCT+GGG 0.548970 5_1:-10487513 None:intergenic
AAAAGGAAAAGGAGGGTTTG+TGG 0.549780 5_1:-10483267 None:intergenic
GGACAGAGGCTTGGAGTGGC+TGG 0.550267 5_1:+10485062 Msa0716890:CDS
GCAATGACTGCAACTATGCC+GGG 0.550704 5_1:+10487447 Msa0716890:CDS
ATCCTTTGTAAACTACTACA+TGG 0.552138 5_1:+10485254 Msa0716890:CDS
ACCAAAGTATGGTCATCTAA+AGG 0.556252 5_1:+10485667 Msa0716890:CDS
ATGAACATTCCAAAACACAT+AGG 0.556850 5_1:-10483725 None:intergenic
TCTTCCTTGCACATAATCCA+TGG 0.561005 5_1:-10484840 None:intergenic
TGGCTGTTGAAATGGGAACT+GGG 0.561613 5_1:+10484814 Msa0716890:CDS
TGGCTATAATTATATGAGCT+GGG 0.564896 5_1:+10484782 Msa0716890:CDS
ATGGTTGAGTTACCTGCTCT+AGG 0.565522 5_1:-10487936 None:intergenic
TTCTGTAGAGTGGATGCAGT+CGG 0.566147 5_1:+10487173 Msa0716890:CDS
TTGGTTGACCACAACCAAGC+TGG 0.566598 5_1:-10487490 None:intergenic
AGGGAAGAAATGACCTTGTG+AGG 0.567058 5_1:+10483875 Msa0716890:CDS
TCTACAGAAGAGATACCGTC+TGG 0.572481 5_1:-10487159 None:intergenic
TCCTGAAGGAGAAGAGCCAT+TGG 0.574296 5_1:+10487334 Msa0716890:CDS
TTGGCAGAAATGGACTTACC+AGG 0.575230 5_1:+10487021 Msa0716890:CDS
AAAATGAAAGAAACCTTGAA+AGG 0.578101 5_1:-10484133 None:intergenic
CTTTGGAGGTCTAAATGACC+CGG 0.586826 5_1:-10487465 None:intergenic
TATCTAATATGTTGTGCCCA+AGG 0.587605 5_1:+10488405 Msa0716890:three_prime_UTR
TGGTCTCTAGTCTCTTACGT+TGG 0.587671 5_1:+10483161 Msa0716890:five_prime_UTR
GATAGGAGATTCAGATACAC+TGG 0.587998 5_1:+10486753 Msa0716890:CDS
TATGTTGTGCCCAAGGCACA+TGG 0.589610 5_1:+10488412 Msa0716890:three_prime_UTR
CTGTCTGAATAAACCTCACA+AGG 0.590928 5_1:-10483888 None:intergenic
ACGGTATCTCTTCTGTAGAG+TGG 0.591236 5_1:+10487163 Msa0716890:CDS
CAAACTAAAACATATAGGCT+GGG 0.591462 5_1:-10488886 None:intergenic
TGATATGGCCCTGGGAACAA+AGG 0.591580 5_1:+10488907 Msa0716890:three_prime_UTR
AGTACCTTGTGCCATGTCAG+TGG 0.600254 5_1:-10487219 None:intergenic
GCATTGGATATGGACGGTAT+GGG 0.601630 5_1:+10487356 Msa0716890:CDS
AAACAGAAATTTGGAAACTG+AGG 0.603430 5_1:-10483410 None:intergenic
CAGGTTCTGCCTATGGAACG+AGG 0.608599 5_1:+10486727 Msa0716890:intron
GTTGACTGAACAATGAGACT+GGG 0.608641 5_1:-10486584 None:intergenic
GGGAGGATGCTGACGGACCA+CGG 0.608959 5_1:-10485965 None:intergenic
TGACAGATAAACACCTGCAA+TGG 0.611125 5_1:+10484989 Msa0716890:intron
AGGGTTCACTGAGAAAATTG+TGG 0.611742 5_1:+10484495 Msa0716890:CDS
GAATAGTTGAATCTGAAACC+AGG 0.612294 5_1:+10488812 Msa0716890:three_prime_UTR
CCGTCCATATCCAATGCCAA+TGG 0.619087 5_1:-10487350 None:intergenic
CATGGATAACAACTGGACCT+AGG 0.619397 5_1:-10486970 None:intergenic
ACCTGTGGGAGTTACGAGCA+AGG 0.622090 5_1:+10487883 Msa0716890:CDS
GGTTCCATGGATTATGTGCA+AGG 0.622891 5_1:+10484836 Msa0716890:CDS
ACAGGTTGGGCTGAAAGGAG+AGG 0.624284 5_1:+10487119 Msa0716890:intron
AAATAGTGAGAGGTTCTCAT+GGG 0.625927 5_1:+10486227 Msa0716890:CDS
GCTTCAATACATTCGGACAC+AGG 0.626321 5_1:-10488208 None:intergenic
CATTTCGAGACTTGGAACAC+AGG 0.627929 5_1:+10486944 Msa0716890:CDS
ATCCTATGAGAATGGTGAAG+GGG 0.631929 5_1:-10483243 None:intergenic
GTGCTGTCAAAGAACGTAGG+TGG 0.632196 5_1:+10486920 Msa0716890:intron
GAACTCCGTTGGGAACCTGT+GGG 0.632994 5_1:+10487869 Msa0716890:CDS
GTGGTCAACCAACCCAGCGA+TGG 0.634042 5_1:+10487501 Msa0716890:CDS
TGTGTCGATAGTGTTGATGT+AGG 0.635805 5_1:+10486527 Msa0716890:intron
TGTGTCCGAATGTATTGAAG+CGG 0.636533 5_1:+10488210 Msa0716890:CDS
AACAACTGAGAACAATGTAA+GGG 0.638142 5_1:-10483443 None:intergenic
ATGAATCTTGCATCTCCAGA+CGG 0.639322 5_1:+10487144 Msa0716890:CDS
TAATGAGGTAACAACTGGGT+CGG 0.642934 5_1:-10485735 None:intergenic
GTATCCTATGAGAATGGTGA+AGG 0.643004 5_1:-10483245 None:intergenic
AAAGAAATCAGCCACTGACA+TGG 0.643939 5_1:+10487208 Msa0716890:CDS
ACAATCCGGGAGGATGCTGA+CGG 0.647302 5_1:-10485972 None:intergenic
GGCTGTTGAAATGGGAACTG+GGG 0.648362 5_1:+10484815 Msa0716890:CDS
TTCTGCCTATGGAACGAGGG+AGG 0.648951 5_1:+10486731 Msa0716890:CDS
CGAACAATCTCCAGACTCTG+TGG 0.651892 5_1:-10485870 None:intergenic
TAACTCCCACAGGTTCCCAA+CGG 0.655357 5_1:-10487874 None:intergenic
TCTGAATCCTTTCTCCATGG+AGG 0.655908 5_1:+10486554 Msa0716890:CDS
AGATGATGCTCCAGATCCAG+TGG 0.655965 5_1:+10484860 Msa0716890:CDS
TATGTGGAAAAGGAAAAGGA+GGG 0.656148 5_1:-10483274 None:intergenic
AACCATGTAGTAGTTTACAA+AGG 0.656727 5_1:-10485256 None:intergenic
TTTGTGGTATCCTATGAGAA+TGG 0.661051 5_1:-10483251 None:intergenic
TATCCTATGAGAATGGTGAA+GGG 0.661216 5_1:-10483244 None:intergenic
AAAGGTTACACACCTGAGAG+AGG 0.661964 5_1:-10484567 None:intergenic
TGTTGCCTACAAATAGTGAG+AGG 0.667469 5_1:+10486217 Msa0716890:CDS
TGGAACAGATAAACGTAACG+AGG 0.667526 5_1:+10486310 Msa0716890:CDS
CCATTGGCATTGGATATGGA+CGG 0.668995 5_1:+10487350 Msa0716890:CDS
TCAGCCACTGACATGGCACA+AGG 0.674579 5_1:+10487215 Msa0716890:CDS
GGGGTACAGAGTAAAATGCT+CGG 0.677281 5_1:+10484753 Msa0716890:CDS
AGGTTCTGCCTATGGAACGA+GGG 0.683437 5_1:+10486728 Msa0716890:intron
GGAACAGATAAACGTAACGA+GGG 0.684679 5_1:+10486311 Msa0716890:CDS
GAACGTCTCTATGAGTCACA+GGG 0.688976 5_1:+10484532 Msa0716890:CDS
AACCCTACAAGCCTACAATG+TGG 0.692362 5_1:+10485041 Msa0716890:CDS
AATTCACACTCTCGACACAA+GGG 0.694070 5_1:-10488850 None:intergenic
CAAGCCTACAATGTGGACAG+AGG 0.694525 5_1:+10485048 Msa0716890:CDS
GTGAATGAGTGAGTGTTGTG+TGG 0.703116 5_1:+10483195 Msa0716890:five_prime_UTR
TCAGATTGAGAACGAGTACG+GGG 0.703138 5_1:+10484734 Msa0716890:intron
TGCACTATAACTTACCTCCG+TGG 0.705990 5_1:+10485948 Msa0716890:CDS
ATAGTTGAATCTGAAACCAG+GGG 0.706875 5_1:+10488814 Msa0716890:three_prime_UTR
TAAAAGGACCTCCAGCTGTG+CGG 0.707061 5_1:-10485385 None:intergenic
TTCCTAATGAGGTAACAACT+GGG 0.708927 5_1:-10485739 None:intergenic
TTAGAAGGAACATACATCTG+GGG 0.714681 5_1:-10483557 None:intergenic
ATGTGGACAGAGGCTTGGAG+TGG 0.718389 5_1:+10485058 Msa0716890:CDS
TTTGTGCTGTCAAAGAACGT+AGG 0.718616 5_1:+10486917 Msa0716890:intron
TTGACTGAACAATGAGACTG+GGG 0.724383 5_1:-10486583 None:intergenic
CAGCATTTCTACAATCCGGG+AGG 0.731201 5_1:-10485982 None:intergenic
TCGTTCATGCAGTATCATGG+AGG 0.745456 5_1:+10485350 Msa0716890:intron
CGTCTCTATGAGTCACAGGG+TGG 0.748644 5_1:+10484535 Msa0716890:CDS
AGGATGCTGACGGACCACGG+AGG 0.817951 5_1:-10485962 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAGTAATTTTGTAAT+AGG - chr5_1:10483137-10483156 None:intergenic 10.0%
!! CAAAATTACTAAAAATAAAT+TGG + chr5_1:10483141-10483160 Msa0716890:five_prime_UTR 10.0%
!!! ATAATGTTAATAACTTTTAA+GGG - chr5_1:10484904-10484923 None:intergenic 10.0%
!!! ATAAATGACTAATTTTAAAT+AGG - chr5_1:10488792-10488811 None:intergenic 10.0%
!!! ATTGATTTTCTTAATTTAGA+AGG - chr5_1:10483575-10483594 None:intergenic 15.0%
!! AACATAAAATCATTAAACAA+TGG - chr5_1:10484044-10484063 None:intergenic 15.0%
!! AAAAAGCAAATTAACAATAA+AGG - chr5_1:10484588-10484607 None:intergenic 15.0%
!!! TAATGTTAATAACTTTTAAG+GGG - chr5_1:10484903-10484922 None:intergenic 15.0%
!!! CATAATGTTAATAACTTTTA+AGG - chr5_1:10484905-10484924 None:intergenic 15.0%
!!! CAAATTTTCAATTGTTAAAT+CGG - chr5_1:10485294-10485313 None:intergenic 15.0%
!!! TATTCGTTAATTAACATTTT+AGG + chr5_1:10487534-10487553 Msa0716890:intron 15.0%
!! AACAAAAAGAAACAGAAATT+TGG - chr5_1:10483422-10483441 None:intergenic 20.0%
!! TACTTCAATTGAAAAAATGA+AGG - chr5_1:10484439-10484458 None:intergenic 20.0%
!!! GAAGTAGTTTTTTTAATGAA+TGG + chr5_1:10484453-10484472 Msa0716890:intron 20.0%
!! CTTTCCTAAAAACAATTAAA+GGG - chr5_1:10484634-10484653 None:intergenic 20.0%
!!! AATGTTAATAACTTTTAAGG+GGG - chr5_1:10484902-10484921 None:intergenic 20.0%
!! CGATTTAACAATTGAAAATT+TGG + chr5_1:10485292-10485311 Msa0716890:intron 20.0%
!! TTGTTTCAATAAATATTGAC+AGG + chr5_1:10485632-10485651 Msa0716890:intron 20.0%
!! AAATATTGACAGGTTTAATT+AGG + chr5_1:10485642-10485661 Msa0716890:intron 20.0%
!! AATTGTTAAATCTCTATGAA+TGG - chr5_1:10486125-10486144 None:intergenic 20.0%
!! ATTATCTTTGGTATATAACT+AGG + chr5_1:10486343-10486362 Msa0716890:CDS 20.0%
!! TGATATATATGATTGAAAAC+AGG + chr5_1:10486708-10486727 Msa0716890:intron 20.0%
!! AGTAGAATTTCAGAAAATAA+AGG - chr5_1:10486860-10486879 None:intergenic 20.0%
!!! TCAGTTATTTCATCATTTTT+GGG - chr5_1:10487284-10487303 None:intergenic 20.0%
!!! ATCAGTTATTTCATCATTTT+TGG - chr5_1:10487285-10487304 None:intergenic 20.0%
!!! TTGCTAATGAAATTTTTGAA+GGG - chr5_1:10487684-10487703 None:intergenic 20.0%
!!! TTTGCTAATGAAATTTTTGA+AGG - chr5_1:10487685-10487704 None:intergenic 20.0%
!! TGATTGTTAAATGAAGAAAA+TGG - chr5_1:10487958-10487977 None:intergenic 20.0%
!!! ATTTCTGTCAACTTTATTTT+TGG + chr5_1:10488082-10488101 Msa0716890:intron 20.0%
!!! ATTTTTACACAGAAATGTAT+AGG + chr5_1:10488137-10488156 Msa0716890:intron 20.0%
!! AATAGTAATAAGAGTAGAAT+AGG + chr5_1:10488347-10488366 Msa0716890:three_prime_UTR 20.0%
!!! TGCCAATAGTATTTTTTTTA+GGG + chr5_1:10488375-10488394 Msa0716890:three_prime_UTR 20.0%
!! TTCCCTAAAAAAAATACTAT+TGG - chr5_1:10488380-10488399 None:intergenic 20.0%
!! TTAATGGGATTGTATTTAAA+AGG + chr5_1:10488466-10488485 Msa0716890:intron 20.0%
!!! AATTGTAGTTTTCATACTTA+GGG - chr5_1:10488716-10488735 None:intergenic 20.0%
!!! AAATTGTAGTTTTCATACTT+AGG - chr5_1:10488715-10488734 None:intergenic 20.0%
!!! AAGTATGAAAACTACAATTT+TGG + chr5_1:10488543-10488562 Msa0716890:intron 20.0%
!!! AAGTATGAAAACTACAATTT+TGG - chr5_1:10488543-10488562 None:intergenic 20.0%
!!! AAATTGTAGTTTTCATACTT+AGG + chr5_1:10488715-10488734 Msa0716890:intron 20.0%
!!! AATTGTAGTTTTCATACTTA+GGG + chr5_1:10488716-10488735 Msa0716890:intron 20.0%
!! CATATCAAACTAAAACATAT+AGG - chr5_1:10488894-10488913 None:intergenic 20.0%
!!! CTATATGTTTTAGTTTGATA+TGG + chr5_1:10488892-10488911 Msa0716890:three_prime_UTR 20.0%
!! AGTAAATTAAACTCCAAATT+AGG + chr5_1:10488964-10488983 Msa0716890:three_prime_UTR 20.0%
! AGACATTGCTTAAGAAATTA+TGG + chr5_1:10483381-10483400 Msa0716890:exon 25.0%
! TCACAAACAAACTGAAAAAA+AGG - chr5_1:10483616-10483635 None:intergenic 25.0%
!! TAATTGAAACCTATGTGTTT+TGG + chr5_1:10483716-10483735 Msa0716890:CDS 25.0%
!! TAATTTGTGTGTATACTGAA+TGG + chr5_1:10483826-10483845 Msa0716890:intron 25.0%
! AAAATGAAAGAAACCTTGAA+AGG - chr5_1:10484136-10484155 None:intergenic 25.0%
! TCACTAGTCATGTATATATT+TGG - chr5_1:10484390-10484409 None:intergenic 25.0%
! CCTTTCCTAAAAACAATTAA+AGG - chr5_1:10484635-10484654 None:intergenic 25.0%
!!! CCTTTAATTGTTTTTAGGAA+AGG + chr5_1:10484632-10484651 Msa0716890:intron 25.0%
! AAGTTATTAACATTATGCAC+CGG + chr5_1:10484908-10484927 Msa0716890:intron 25.0%
! TTTCCGAAATTCCAAAATAT+GGG - chr5_1:10485113-10485132 None:intergenic 25.0%
! ATTTCCGAAATTCCAAAATA+TGG - chr5_1:10485114-10485133 None:intergenic 25.0%
!!! ATATTTTGGAATTTCGGAAA+TGG + chr5_1:10485113-10485132 Msa0716890:intron 25.0%
!! ATCCTCCTTTTTGTATAAAT+CGG - chr5_1:10485236-10485255 None:intergenic 25.0%
!! ATTCATTTTCTCCCTATATT+AGG + chr5_1:10486167-10486186 Msa0716890:intron 25.0%
!! AAATTAGTACAGAAGTATGT+GGG - chr5_1:10486495-10486514 None:intergenic 25.0%
!! TAAATTAGTACAGAAGTATG+TGG - chr5_1:10486496-10486515 None:intergenic 25.0%
!!! TGTTTCCTTTAACTTTTTGA+TGG - chr5_1:10486688-10486707 None:intergenic 25.0%
!!! CAGTTATTTCATCATTTTTG+GGG - chr5_1:10487283-10487302 None:intergenic 25.0%
!! AAAGGTCAAATATGGATTAA+TGG + chr5_1:10487380-10487399 Msa0716890:CDS 25.0%
!! AAGGTCAAATATGGATTAAT+GGG + chr5_1:10487381-10487400 Msa0716890:CDS 25.0%
! TGGTTAAAAAATACCTAACA+TGG + chr5_1:10487569-10487588 Msa0716890:intron 25.0%
!!! TAATCTGTTAGTTGTTTTTG+AGG + chr5_1:10487645-10487664 Msa0716890:CDS 25.0%
! ATCATCCTAATCTTAAGAAT+TGG + chr5_1:10487743-10487762 Msa0716890:CDS 25.0%
!! CATTGATAGTTATGGAAAAT+CGG + chr5_1:10487768-10487787 Msa0716890:CDS 25.0%
!! ACTGTATCAAACAGTAATTT+TGG + chr5_1:10488179-10488198 Msa0716890:CDS 25.0%
!! CTGTATCAAACAGTAATTTT+GGG + chr5_1:10488180-10488199 Msa0716890:CDS 25.0%
! CTGCAAATTACACTTAAAAA+GGG - chr5_1:10488302-10488321 None:intergenic 25.0%
! ACTGCAAATTACACTTAAAA+AGG - chr5_1:10488303-10488322 None:intergenic 25.0%
!!! GTGCCAATAGTATTTTTTTT+AGG + chr5_1:10488374-10488393 Msa0716890:three_prime_UTR 25.0%
!! ATTGTAGTTTTCATACTTAG+GGG - chr5_1:10488717-10488736 None:intergenic 25.0%
! TAACATATTTCCCTAAACAT+GGG - chr5_1:10488571-10488590 None:intergenic 25.0%
! ATAACATATTTCCCTAAACA+TGG - chr5_1:10488572-10488591 None:intergenic 25.0%
!!! CAACATTTTGAAAAGATAAG+GGG - chr5_1:10488631-10488650 None:intergenic 25.0%
!!! GCAACATTTTGAAAAGATAA+GGG - chr5_1:10488632-10488651 None:intergenic 25.0%
!! TTTTCAAAATGTTGCGATTA+TGG + chr5_1:10488637-10488656 Msa0716890:intron 25.0%
!! ATTGTAGTTTTCATACTTAG+GGG + chr5_1:10488717-10488736 Msa0716890:intron 25.0%
!!! TTTTCGTTTGTTTTACTTAC+TGG + chr5_1:10488941-10488960 Msa0716890:three_prime_UTR 25.0%
AAACAGAAATTTGGAAACTG+AGG - chr5_1:10483413-10483432 None:intergenic 30.0%
AACAACTGAGAACAATGTAA+GGG - chr5_1:10483446-10483465 None:intergenic 30.0%
AAACAACTGAGAACAATGTA+AGG - chr5_1:10483447-10483466 None:intergenic 30.0%
AGAAAAGCCATTATCATCAA+TGG + chr5_1:10483487-10483506 Msa0716890:CDS 30.0%
CAGAAAAAAGGATTCTTCTT+TGG - chr5_1:10483513-10483532 None:intergenic 30.0%
!!! CAAAGAAGAATCCTTTTTTC+TGG + chr5_1:10483511-10483530 Msa0716890:CDS 30.0%
AATGTATGGAACCAGAAAAA+AGG - chr5_1:10483525-10483544 None:intergenic 30.0%
TTTAGAAGGAACATACATCT+GGG - chr5_1:10483561-10483580 None:intergenic 30.0%
ATTTAGAAGGAACATACATC+TGG - chr5_1:10483562-10483581 None:intergenic 30.0%
! CTGATTTTCAAAGCTAAAGA+AGG + chr5_1:10483682-10483701 Msa0716890:CDS 30.0%
! ATTTTCAAAGCTAAAGAAGG+AGG + chr5_1:10483685-10483704 Msa0716890:CDS 30.0%
ATGAACATTCCAAAACACAT+AGG - chr5_1:10483728-10483747 None:intergenic 30.0%
! TTCAATGCAGTACAATTTTG+AGG + chr5_1:10483855-10483874 Msa0716890:intron 30.0%
! TCAATGCAGTACAATTTTGA+GGG + chr5_1:10483856-10483875 Msa0716890:intron 30.0%
! TTTGTGCTGAATGGAATTTT+GGG + chr5_1:10483956-10483975 Msa0716890:CDS 30.0%
!!! TCTTGAAAAGTTTGCTGTTT+TGG + chr5_1:10483999-10484018 Msa0716890:intron 30.0%
ATATGACTAGTGAAACCAAA+TGG + chr5_1:10484206-10484225 Msa0716890:intron 30.0%
!! GAGTCCCTTTAATTGTTTTT+AGG + chr5_1:10484627-10484646 Msa0716890:intron 30.0%
!! TTTAGGAAAGGTGCTAATTA+TGG + chr5_1:10484644-10484663 Msa0716890:intron 30.0%
CTCATATAATTATAGCCAAC+AGG - chr5_1:10484780-10484799 None:intergenic 30.0%
TTGGCTATAATTATATGAGC+TGG + chr5_1:10484781-10484800 Msa0716890:CDS 30.0%
TGGCTATAATTATATGAGCT+GGG + chr5_1:10484782-10484801 Msa0716890:CDS 30.0%
TTGCATATTCAGGAATTTGA+TGG + chr5_1:10484941-10484960 Msa0716890:intron 30.0%
! AGTTACTTACTCCCATATTT+TGG + chr5_1:10485099-10485118 Msa0716890:intron 30.0%
!!! ACTCCCATATTTTGGAATTT+CGG + chr5_1:10485107-10485126 Msa0716890:intron 30.0%
! TTTTCTTTTGCCAAACATGA+AGG + chr5_1:10485148-10485167 Msa0716890:intron 30.0%
! ATTCTGAAAACCTTCATGTT+TGG - chr5_1:10485161-10485180 None:intergenic 30.0%
! ACATGAAGGTTTTCAGAATT+CGG + chr5_1:10485162-10485181 Msa0716890:intron 30.0%
! TCCTCCTTTTTGTATAAATC+GGG - chr5_1:10485235-10485254 None:intergenic 30.0%
ATCCTTTGTAAACTACTACA+TGG + chr5_1:10485254-10485273 Msa0716890:CDS 30.0%
AACCATGTAGTAGTTTACAA+AGG - chr5_1:10485259-10485278 None:intergenic 30.0%
TTTGTAAACTACTACATGGT+TGG + chr5_1:10485258-10485277 Msa0716890:intron 30.0%
! TATCATGGAGGAACAAATTT+TGG + chr5_1:10485362-10485381 Msa0716890:CDS 30.0%
TTAATTAGGCAACCAAAGTA+TGG + chr5_1:10485656-10485675 Msa0716890:CDS 30.0%
TGTGTCAATAAAGGAACTTA+CGG - chr5_1:10485814-10485833 None:intergenic 30.0%
AAAACAGCATTTCTACAATC+CGG - chr5_1:10485989-10486008 None:intergenic 30.0%
AAGGTGAATAAATTGTGTAC+AGG - chr5_1:10486094-10486113 None:intergenic 30.0%
! ATTTTCTCCCTATATTAGGT+TGG + chr5_1:10486171-10486190 Msa0716890:intron 30.0%
ATATTGTCATCATCAATTGC+CGG + chr5_1:10486408-10486427 Msa0716890:intron 30.0%
! ATAAAGGCGTAAGTAATTTC+CGG - chr5_1:10486430-10486449 None:intergenic 30.0%
CAACTAGTTAGGGAATATAA+AGG - chr5_1:10486446-10486465 None:intergenic 30.0%
ACTCTACTTTCAACTAGTTA+GGG - chr5_1:10486456-10486475 None:intergenic 30.0%
!! TTCCTTTAACTTTTTGATGG+AGG - chr5_1:10486685-10486704 None:intergenic 30.0%
AGGTAGAAAACAAAACTTAC+TGG - chr5_1:10486840-10486859 None:intergenic 30.0%
!! AGGTACTAAAAAAGTGCTTA+AGG + chr5_1:10487235-10487254 Msa0716890:intron 30.0%
TGGATTAATGGGATAAGTAT+CGG + chr5_1:10487392-10487411 Msa0716890:CDS 30.0%
TAAATAAACTTACCATCGCT+GGG - chr5_1:10487516-10487535 None:intergenic 30.0%
ATAAATAAACTTACCATCGC+TGG - chr5_1:10487517-10487536 None:intergenic 30.0%
AACATGAAGTAATCCATGTT+AGG - chr5_1:10487585-10487604 None:intergenic 30.0%
!!! TTAGTTGTTTTTGAGGAACT+TGG + chr5_1:10487652-10487671 Msa0716890:CDS 30.0%
!!! TAGTTGTTTTTGAGGAACTT+GGG + chr5_1:10487653-10487672 Msa0716890:CDS 30.0%
ATGTGCCAATTCTTAAGATT+AGG - chr5_1:10487751-10487770 None:intergenic 30.0%
! AATTGGCACATTGATAGTTA+TGG + chr5_1:10487760-10487779 Msa0716890:CDS 30.0%
! TTACAATGCAAGTGAACTTT+TGG - chr5_1:10487808-10487827 None:intergenic 30.0%
TGCAAATTTAATGGAAGAGA+TGG - chr5_1:10487842-10487861 None:intergenic 30.0%
TCCATTAAATTTGCAAGCTT+TGG + chr5_1:10487847-10487866 Msa0716890:CDS 30.0%
TCCAAAGCTTGCAAATTTAA+TGG - chr5_1:10487851-10487870 None:intergenic 30.0%
AAGTTGACAGAAATTAGAGA+CGG - chr5_1:10488076-10488095 None:intergenic 30.0%
CTCCTTTAATTGGAAATAGT+CGG - chr5_1:10488260-10488279 None:intergenic 30.0%
AACTAATCAGCTCCTTTAAT+TGG - chr5_1:10488270-10488289 None:intergenic 30.0%
AAATAAAAACCATGTGCCTT+GGG - chr5_1:10488424-10488443 None:intergenic 30.0%
TAAATAAAAACCATGTGCCT+TGG - chr5_1:10488425-10488444 None:intergenic 30.0%
!!! AAGCAGTGTTGTTTTCTTAA+TGG + chr5_1:10488450-10488469 Msa0716890:three_prime_UTR 30.0%
!!! AGCAGTGTTGTTTTCTTAAT+GGG + chr5_1:10488451-10488470 Msa0716890:three_prime_UTR 30.0%
!! TAGTTTTTGAAAGTTAAGGG+GGG - chr5_1:10488507-10488526 None:intergenic 30.0%
!! CTAGTTTTTGAAAGTTAAGG+GGG - chr5_1:10488508-10488527 None:intergenic 30.0%
!!! GCTAGTTTTTGAAAGTTAAG+GGG - chr5_1:10488509-10488528 None:intergenic 30.0%
!!! CGCTAGTTTTTGAAAGTTAA+GGG - chr5_1:10488510-10488529 None:intergenic 30.0%
!!! TCGCTAGTTTTTGAAAGTTA+AGG - chr5_1:10488511-10488530 None:intergenic 30.0%
! CTTTCAAAAACTAGCGATTT+TGG + chr5_1:10488514-10488533 Msa0716890:intron 30.0%
! TTGTAGTTTTCATACTTAGG+GGG - chr5_1:10488718-10488737 None:intergenic 30.0%
AACATATTTCCCTAAACATG+GGG - chr5_1:10488570-10488589 None:intergenic 30.0%
!!! TATTTTAACCCCCTAACATA+AGG + chr5_1:10488589-10488608 Msa0716890:intron 30.0%
!! ATTTTAACCCCCTAACATAA+GGG + chr5_1:10488590-10488609 Msa0716890:intron 30.0%
ACATATTTCCCTTATGTTAG+GGG - chr5_1:10488601-10488620 None:intergenic 30.0%
GACATATTTCCCTTATGTTA+GGG - chr5_1:10488602-10488621 None:intergenic 30.0%
AGACATATTTCCCTTATGTT+AGG - chr5_1:10488603-10488622 None:intergenic 30.0%
!! CGCAACATTTTGAAAAGATA+AGG - chr5_1:10488633-10488652 None:intergenic 30.0%
! TTGTAGTTTTCATACTTAGG+GGG + chr5_1:10488718-10488737 Msa0716890:intron 30.0%
! CTTTCAAAAACTTGCGATTT+TGG - chr5_1:10488744-10488763 None:intergenic 30.0%
!! TCGCAAGTTTTTGAAAGTTA+AGG + chr5_1:10488747-10488766 Msa0716890:intron 30.0%
!! CGCAAGTTTTTGAAAGTTAA+GGG + chr5_1:10488748-10488767 Msa0716890:intron 30.0%
!! GCAAGTTTTTGAAAGTTAAG+GGG + chr5_1:10488749-10488768 Msa0716890:intron 30.0%
!! CAAGTTTTTGAAAGTTAAGG+GGG + chr5_1:10488750-10488769 Msa0716890:intron 30.0%
!! AAGTTTTTGAAAGTTAAGGG+GGG + chr5_1:10488751-10488770 Msa0716890:intron 30.0%
! AATAGTTGAATCTGAAACCA+GGG + chr5_1:10488813-10488832 Msa0716890:three_prime_UTR 30.0%
CAAACTAAAACATATAGGCT+GGG - chr5_1:10488889-10488908 None:intergenic 30.0%
TCAAACTAAAACATATAGGC+TGG - chr5_1:10488890-10488909 None:intergenic 30.0%
TTCCTAACTTGAACCTAATT+TGG - chr5_1:10488980-10488999 None:intergenic 30.0%
! AATTAGGTTCAAGTTAGGAA+TGG + chr5_1:10488980-10488999 Msa0716890:three_prime_UTR 30.0%
ACAAACTTCATGGTTACATT+AGG - chr5_1:10489008-10489027 None:intergenic 30.0%
AATGTAACCATGAAGTTTGT+TGG + chr5_1:10489008-10489027 Msa0716890:three_prime_UTR 30.0%
TAAACTTCCAACAAACTTCA+TGG - chr5_1:10489018-10489037 None:intergenic 30.0%
TATCCTATGAGAATGGTGAA+GGG - chr5_1:10483247-10483266 None:intergenic 35.0%
TTTGTGGTATCCTATGAGAA+TGG - chr5_1:10483254-10483273 None:intergenic 35.0%
TATGTGGAAAAGGAAAAGGA+GGG - chr5_1:10483277-10483296 None:intergenic 35.0%
AGAGTATGTGGAAAAGGAAA+AGG - chr5_1:10483281-10483300 None:intergenic 35.0%
! AAAGAGAGAGTATGTGGAAA+AGG - chr5_1:10483287-10483306 None:intergenic 35.0%
TTAAGCAATGTCTCTTGTTG+TGG - chr5_1:10483374-10483393 None:intergenic 35.0%
! TCTTTGGCCATTGATGATAA+TGG - chr5_1:10483497-10483516 None:intergenic 35.0%
TTAGAAGGAACATACATCTG+GGG - chr5_1:10483560-10483579 None:intergenic 35.0%
TGAAAGTGAAGTACATTTCC+AGG - chr5_1:10483760-10483779 None:intergenic 35.0%
CTATATGCTCATCTAAGGAT+TGG + chr5_1:10483925-10483944 Msa0716890:CDS 35.0%
TTCCATTCAGCACAAACATA+AGG - chr5_1:10483952-10483971 None:intergenic 35.0%
! GTTTGTGCTGAATGGAATTT+TGG + chr5_1:10483955-10483974 Msa0716890:CDS 35.0%
!!! TTTGCTGTTTTGGTCTTTTG+AGG + chr5_1:10484009-10484028 Msa0716890:intron 35.0%
!!! TTGCTGTTTTGGTCTTTTGA+GGG + chr5_1:10484010-10484029 Msa0716890:intron 35.0%
! TTTTATGTTGTCATGTGCAG+AGG + chr5_1:10484055-10484074 Msa0716890:intron 35.0%
ACAAGACAATGAACCTTTCA+AGG + chr5_1:10484120-10484139 Msa0716890:CDS 35.0%
TCAGTGAAGGTAAAATCGAT+TGG + chr5_1:10484253-10484272 Msa0716890:intron 35.0%
CAGTGAAGGTAAAATCGATT+GGG + chr5_1:10484254-10484273 Msa0716890:intron 35.0%
AGTGAAGGTAAAATCGATTG+GGG + chr5_1:10484255-10484274 Msa0716890:intron 35.0%
ACCCTGGAAGAAACAATAAT+TGG + chr5_1:10484292-10484311 Msa0716890:intron 35.0%
! GCCAATTATTGTTTCTTCCA+GGG - chr5_1:10484296-10484315 None:intergenic 35.0%
GTCGGGAGATAAATAAAGTT+TGG - chr5_1:10484318-10484337 None:intergenic 35.0%
!! TATATTTGGTCTTAACCCTC+CGG - chr5_1:10484376-10484395 None:intergenic 35.0%
ATGACTAGTGACAGATTAGA+AGG + chr5_1:10484399-10484418 Msa0716890:intron 35.0%
TGACTAGTGACAGATTAGAA+GGG + chr5_1:10484400-10484419 Msa0716890:intron 35.0%
! TTTTGCAGAAAGCAATGCAA+GGG + chr5_1:10484476-10484495 Msa0716890:intron 35.0%
!! TTCTTCTAGATCTAGCTTTG+TGG + chr5_1:10484674-10484693 Msa0716890:intron 35.0%
TTTCAGATTGAGAACGAGTA+CGG + chr5_1:10484732-10484751 Msa0716890:intron 35.0%
AATATGCAACCACATGTTAC+CGG - chr5_1:10484930-10484949 None:intergenic 35.0%
TAACATGTGGTTGCATATTC+AGG + chr5_1:10484931-10484950 Msa0716890:intron 35.0%
ATCACAATAAAAGCCATTGC+AGG - chr5_1:10485005-10485024 None:intergenic 35.0%
! TGAACAGGTCTTTTGTGAAT+TGG - chr5_1:10485192-10485211 None:intergenic 35.0%
AATTCACAAAAGACCTGTTC+AGG + chr5_1:10485191-10485210 Msa0716890:CDS 35.0%
GTAGCCCGATTTATACAAAA+AGG + chr5_1:10485228-10485247 Msa0716890:CDS 35.0%
AACGAAGTAAGTTACTCAAG+TGG - chr5_1:10485335-10485354 None:intergenic 35.0%
! TCATAGCTGGTAGTGATAAA+AGG - chr5_1:10485404-10485423 None:intergenic 35.0%
ACCAAAGTATGGTCATCTAA+AGG + chr5_1:10485667-10485686 Msa0716890:CDS 35.0%
TCCTTTAGATGACCATACTT+TGG - chr5_1:10485671-10485690 None:intergenic 35.0%
TCATCTAAAGGAGCTTCATA+AGG + chr5_1:10485679-10485698 Msa0716890:CDS 35.0%
TTCCTAATGAGGTAACAACT+GGG - chr5_1:10485742-10485761 None:intergenic 35.0%
TTTCCTAATGAGGTAACAAC+TGG - chr5_1:10485743-10485762 None:intergenic 35.0%
AGTTCCTTTATTGACACAAG+TGG + chr5_1:10485816-10485835 Msa0716890:intron 35.0%
GTTCCTTTATTGACACAAGT+GGG + chr5_1:10485817-10485836 Msa0716890:intron 35.0%
ATACCCACTTGTGTCAATAA+AGG - chr5_1:10485823-10485842 None:intergenic 35.0%
TGTATACATAAGCCTGAGAA+AGG - chr5_1:10485850-10485869 None:intergenic 35.0%
AAACAGCATTTCTACAATCC+GGG - chr5_1:10485988-10486007 None:intergenic 35.0%
!!! TGCTGTTTTTAACACAGCAA+AGG + chr5_1:10486000-10486019 Msa0716890:CDS 35.0%
TCTATGAATGGAGATGTTGA+AGG - chr5_1:10486113-10486132 None:intergenic 35.0%
TAGGGAGAAAATGAATTCAG+TGG - chr5_1:10486163-10486182 None:intergenic 35.0%
TTGCACTCCAACCTAATATA+GGG - chr5_1:10486181-10486200 None:intergenic 35.0%
TTTGCACTCCAACCTAATAT+AGG - chr5_1:10486182-10486201 None:intergenic 35.0%
AAATAGTGAGAGGTTCTCAT+GGG + chr5_1:10486227-10486246 Msa0716890:CDS 35.0%
GGGATACAAGTGATTATCTT+TGG + chr5_1:10486331-10486350 Msa0716890:CDS 35.0%
GACTCTACTTTCAACTAGTT+AGG - chr5_1:10486457-10486476 None:intergenic 35.0%
GAAACAGACTAACTACATAC+CGG - chr5_1:10486648-10486667 None:intergenic 35.0%
CACCTCCATCAAAAAGTTAA+AGG + chr5_1:10486680-10486699 Msa0716890:intron 35.0%
TTCTTTGACAGCACAAAACA+CGG - chr5_1:10486914-10486933 None:intergenic 35.0%
TGTTATCCATGGACTTGATA+AGG + chr5_1:10486982-10487001 Msa0716890:CDS 35.0%
GTTATCCATGGACTTGATAA+GGG + chr5_1:10486983-10487002 Msa0716890:CDS 35.0%
TAAAGTACGATTAAGCAACC+TGG - chr5_1:10487042-10487061 None:intergenic 35.0%
AGATGATCTCTTCTCTAAAC+AGG + chr5_1:10487101-10487120 Msa0716890:intron 35.0%
ATCTCTTCTCTAAACAGGTT+GGG + chr5_1:10487106-10487125 Msa0716890:intron 35.0%
GTATGGGTAAAGGTCAAATA+TGG + chr5_1:10487372-10487391 Msa0716890:CDS 35.0%
!! ATTTTAGGTGATGCATGACT+TGG + chr5_1:10487549-10487568 Msa0716890:intron 35.0%
! CATGGATTACTTCATGTTTC+AGG + chr5_1:10487587-10487606 Msa0716890:intron 35.0%
!!! AGTTGTTTTTGAGGAACTTG+GGG + chr5_1:10487654-10487673 Msa0716890:CDS 35.0%
ATTTAATGGAAGAGATGGCT+TGG - chr5_1:10487837-10487856 None:intergenic 35.0%
GATACAGTTACTATGCATCT+TGG - chr5_1:10488167-10488186 None:intergenic 35.0%
GATAACCGCTTCAATACATT+CGG - chr5_1:10488218-10488237 None:intergenic 35.0%
CTCCGACTATTTCCAATTAA+AGG + chr5_1:10488255-10488274 Msa0716890:CDS 35.0%
TATCTAATATGTTGTGCCCA+AGG + chr5_1:10488405-10488424 Msa0716890:three_prime_UTR 35.0%
ACATATTTCCCTAAACATGG+GGG - chr5_1:10488569-10488588 None:intergenic 35.0%
CATATTTCCCTTATGTTAGG+GGG - chr5_1:10488600-10488619 None:intergenic 35.0%
! GGCATCTTTTCAGCAATTTT+AGG + chr5_1:10488679-10488698 Msa0716890:intron 35.0%
!!! TTTCAGCAATTTTAGGACGA+AGG + chr5_1:10488686-10488705 Msa0716890:intron 35.0%
!!! TTCAGCAATTTTAGGACGAA+GGG + chr5_1:10488687-10488706 Msa0716890:intron 35.0%
! GAATAGTTGAATCTGAAACC+AGG + chr5_1:10488812-10488831 Msa0716890:three_prime_UTR 35.0%
! ATAGTTGAATCTGAAACCAG+GGG + chr5_1:10488814-10488833 Msa0716890:three_prime_UTR 35.0%
!!! TTTTAGTTTGATATGGCCCT+GGG + chr5_1:10488899-10488918 Msa0716890:three_prime_UTR 35.0%
! CTCCAAATTAGGTTCAAGTT+AGG + chr5_1:10488975-10488994 Msa0716890:three_prime_UTR 35.0%
GGGTTAAGGTTATGGACTTA+TGG - chr5_1:10483226-10483245 None:intergenic 40.0%
ATCCTATGAGAATGGTGAAG+GGG - chr5_1:10483246-10483265 None:intergenic 40.0%
GTATCCTATGAGAATGGTGA+AGG - chr5_1:10483248-10483267 None:intergenic 40.0%
AAAAGGAAAAGGAGGGTTTG+TGG - chr5_1:10483270-10483289 None:intergenic 40.0%
GTATGTGGAAAAGGAAAAGG+AGG - chr5_1:10483278-10483297 None:intergenic 40.0%
! AGAGAGAAAGAGAGAGTATG+TGG - chr5_1:10483293-10483312 None:intergenic 40.0%
GTTGTAGCAGAGTCAAATGT+AGG - chr5_1:10483352-10483371 None:intergenic 40.0%
!! GGTGCTTCTAGGATAATGTA+TGG - chr5_1:10483539-10483558 None:intergenic 40.0%
! TAATGACCCTTTTGCAGATG+TGG + chr5_1:10483653-10483672 Msa0716890:intron 40.0%
! AATGACCCTTTTGCAGATGT+GGG + chr5_1:10483654-10483673 Msa0716890:intron 40.0%
ATCTTCCCACATCTGCAAAA+GGG - chr5_1:10483662-10483681 None:intergenic 40.0%
CAAAGCTAAAGAAGGAGGTT+TGG + chr5_1:10483690-10483709 Msa0716890:CDS 40.0%
AATGTTCATGAACCTTCTCC+TGG + chr5_1:10483739-10483758 Msa0716890:CDS 40.0%
TGAAGTACATTTCCAGGAGA+AGG - chr5_1:10483754-10483773 None:intergenic 40.0%
CTGTCTGAATAAACCTCACA+AGG - chr5_1:10483891-10483910 None:intergenic 40.0%
ATTCAGACAGTGCATAAAGC+AGG + chr5_1:10483901-10483920 Msa0716890:CDS 40.0%
CAGGACTATATGCTCATCTA+AGG + chr5_1:10483920-10483939 Msa0716890:CDS 40.0%
GACCTTATGTTTGTGCTGAA+TGG + chr5_1:10483947-10483966 Msa0716890:CDS 40.0%
!!! TGCTGTTTTGGTCTTTTGAG+GGG + chr5_1:10484011-10484030 Msa0716890:intron 40.0%
! TCTTGTCTAAAGCTTATGCC+AGG - chr5_1:10484106-10484125 None:intergenic 40.0%
TGGTTAATGAGCTTCAGTGA+AGG + chr5_1:10484240-10484259 Msa0716890:intron 40.0%
GTGAAGGTAAAATCGATTGG+GGG + chr5_1:10484256-10484275 Msa0716890:intron 40.0%
! GGCCAATTATTGTTTCTTCC+AGG - chr5_1:10484297-10484316 None:intergenic 40.0%
! TCGTAATCTGAAATCTGGTC+GGG - chr5_1:10484335-10484354 None:intergenic 40.0%
! CTCGTAATCTGAAATCTGGT+CGG - chr5_1:10484336-10484355 None:intergenic 40.0%
GACCAGATTTCAGATTACGA+GGG + chr5_1:10484335-10484354 Msa0716890:intron 40.0%
! GTTTTGCAGAAAGCAATGCA+AGG + chr5_1:10484475-10484494 Msa0716890:intron 40.0%
AGGGTTCACTGAGAAAATTG+TGG + chr5_1:10484495-10484514 Msa0716890:CDS 40.0%
GGGTTCACTGAGAAAATTGT+GGG + chr5_1:10484496-10484515 Msa0716890:CDS 40.0%
ACACCTGAGAGAGGATTATA+GGG - chr5_1:10484561-10484580 None:intergenic 40.0%
TTCAGATTGAGAACGAGTAC+GGG + chr5_1:10484733-10484752 Msa0716890:intron 40.0%
TGCGAAAATGGCTGTTGAAA+TGG + chr5_1:10484806-10484825 Msa0716890:CDS 40.0%
GCGAAAATGGCTGTTGAAAT+GGG + chr5_1:10484807-10484826 Msa0716890:CDS 40.0%
TCTTCCTTGCACATAATCCA+TGG - chr5_1:10484843-10484862 None:intergenic 40.0%
AGAATGAGAATGCTTACCAC+TGG - chr5_1:10484879-10484898 None:intergenic 40.0%
TGACAGATAAACACCTGCAA+TGG + chr5_1:10484989-10485008 Msa0716890:intron 40.0%
GTAGGCTTGTAGGGTTTATT+GGG - chr5_1:10485037-10485056 None:intergenic 40.0%
TGTAGGCTTGTAGGGTTTAT+TGG - chr5_1:10485038-10485057 None:intergenic 40.0%
! TGAAGGTTTTCAGAATTCGG+AGG + chr5_1:10485165-10485184 Msa0716890:intron 40.0%
CAAAAGACCTGTTCAGGATT+TGG + chr5_1:10485197-10485216 Msa0716890:CDS 40.0%
GCCCGATTTATACAAAAAGG+AGG + chr5_1:10485231-10485250 Msa0716890:CDS 40.0%
ACTTCGTTCATGCAGTATCA+TGG + chr5_1:10485347-10485366 Msa0716890:intron 40.0%
! TGGAGCATCATAATCATAGC+TGG - chr5_1:10485417-10485436 None:intergenic 40.0%
GATGCTCCACTAGATGAATA+TGG + chr5_1:10485428-10485447 Msa0716890:CDS 40.0%
CTCTCACCATATTCATCTAG+TGG - chr5_1:10485437-10485456 None:intergenic 40.0%
TACTTCAGTCTAGTGAAGTG+TGG - chr5_1:10485514-10485533 None:intergenic 40.0%
AAGTAGTCAGTTTAGTCCTC+CGG - chr5_1:10485611-10485630 None:intergenic 40.0%
TAATGAGGTAACAACTGGGT+CGG - chr5_1:10485738-10485757 None:intergenic 40.0%
CTGTTGGAAGTTTCCTAATG+AGG - chr5_1:10485753-10485772 None:intergenic 40.0%
CTCATTAGGAAACTTCCAAC+AGG + chr5_1:10485751-10485770 Msa0716890:CDS 40.0%
TGAAAGCGAGTTTAACCTGT+TGG - chr5_1:10485769-10485788 None:intergenic 40.0%
TATGTATACACCACAGAGTC+TGG + chr5_1:10485860-10485879 Msa0716890:CDS 40.0%
CATCACTCTTGCAGAAGATT+TGG - chr5_1:10485918-10485937 None:intergenic 40.0%
TGTTGCCTACAAATAGTGAG+AGG + chr5_1:10486217-10486236 Msa0716890:CDS 40.0%
GAGAACCTCTCACTATTTGT+AGG - chr5_1:10486225-10486244 None:intergenic 40.0%
CAAATAGTGAGAGGTTCTCA+TGG + chr5_1:10486226-10486245 Msa0716890:CDS 40.0%
GCAACTACAATAACTGCTTC+TGG + chr5_1:10486282-10486301 Msa0716890:CDS 40.0%
AATAACTGCTTCTGGTCTCT+TGG + chr5_1:10486290-10486309 Msa0716890:CDS 40.0%
TGGAACAGATAAACGTAACG+AGG + chr5_1:10486310-10486329 Msa0716890:CDS 40.0%
GGAACAGATAAACGTAACGA+GGG + chr5_1:10486311-10486330 Msa0716890:CDS 40.0%
!! TGTGTCGATAGTGTTGATGT+AGG + chr5_1:10486527-10486546 Msa0716890:intron 40.0%
TCATCTGAATCCTTTCTCCA+TGG + chr5_1:10486551-10486570 Msa0716890:CDS 40.0%
TTGACTGAACAATGAGACTG+GGG - chr5_1:10486586-10486605 None:intergenic 40.0%
GTTGACTGAACAATGAGACT+GGG - chr5_1:10486587-10486606 None:intergenic 40.0%
AGTTGACTGAACAATGAGAC+TGG - chr5_1:10486588-10486607 None:intergenic 40.0%
AGTCTCATTGTTCAGTCAAC+TGG + chr5_1:10486587-10486606 Msa0716890:CDS 40.0%
GTCTCATTGTTCAGTCAACT+GGG + chr5_1:10486588-10486607 Msa0716890:CDS 40.0%
! GCTGTGCATGTTTTCATCAA+TGG + chr5_1:10486614-10486633 Msa0716890:CDS 40.0%
! TTCATCAATGGTCGACTTTC+CGG + chr5_1:10486626-10486645 Msa0716890:CDS 40.0%
TTGAAAACAGGTTCTGCCTA+TGG + chr5_1:10486720-10486739 Msa0716890:intron 40.0%
GATAGGAGATTCAGATACAC+TGG + chr5_1:10486753-10486772 Msa0716890:CDS 40.0%
TTTGTGCTGTCAAAGAACGT+AGG + chr5_1:10486917-10486936 Msa0716890:intron 40.0%
TCAAGTCCATGGATAACAAC+TGG - chr5_1:10486980-10486999 None:intergenic 40.0%
ACTTTCCCTTATCAAGTCCA+TGG - chr5_1:10486991-10487010 None:intergenic 40.0%
TGGACTTGATAAGGGAAAGT+TGG + chr5_1:10486991-10487010 Msa0716890:CDS 40.0%
AGGGAAAGTTGGATTTGTCT+TGG + chr5_1:10487002-10487021 Msa0716890:CDS 40.0%
TGGATTTGTCTTGGCAGAAA+TGG + chr5_1:10487011-10487030 Msa0716890:CDS 40.0%
GATCTCTTCTCTAAACAGGT+TGG + chr5_1:10487105-10487124 Msa0716890:intron 40.0%
ATGAATCTTGCATCTCCAGA+CGG + chr5_1:10487144-10487163 Msa0716890:CDS 40.0%
AAAGAAATCAGCCACTGACA+TGG + chr5_1:10487208-10487227 Msa0716890:CDS 40.0%
!!! ACTTTTTTCGATGCTCCTGA+AGG + chr5_1:10487320-10487339 Msa0716890:CDS 40.0%
!! GGATAAGTATCGGAAGATAC+TGG + chr5_1:10487402-10487421 Msa0716890:CDS 40.0%
! TTTTGCTTCAACCAAGATCG+CGG - chr5_1:10487622-10487641 None:intergenic 40.0%
!!! GTTGTTTTTGAGGAACTTGG+GGG + chr5_1:10487655-10487674 Msa0716890:CDS 40.0%
!!! TTGTTTTTGAGGAACTTGGG+GGG + chr5_1:10487656-10487675 Msa0716890:CDS 40.0%
! CAATGCAAGTGAACTTTTGG+AGG - chr5_1:10487805-10487824 None:intergenic 40.0%
GTTCACTTGCATTGTAATCC+TGG + chr5_1:10487811-10487830 Msa0716890:CDS 40.0%
ATCTTATGACATCCTAGAGC+AGG + chr5_1:10487924-10487943 Msa0716890:CDS 40.0%
TGTGTCCGAATGTATTGAAG+CGG + chr5_1:10488210-10488229 Msa0716890:CDS 40.0%
!! AATTTTGGCCCCCATGTTTA+GGG + chr5_1:10488558-10488577 Msa0716890:intron 40.0%
!!! TCAGCAATTTTAGGACGAAG+GGG + chr5_1:10488688-10488707 Msa0716890:intron 40.0%
AATTCACACTCTCGACACAA+GGG - chr5_1:10488853-10488872 None:intergenic 40.0%
AAATTCACACTCTCGACACA+AGG - chr5_1:10488854-10488873 None:intergenic 40.0%
! TTGTGTCGAGAGTGTGAATT+TGG + chr5_1:10488853-10488872 Msa0716890:three_prime_UTR 40.0%
!!! GTTTTAGTTTGATATGGCCC+TGG + chr5_1:10488898-10488917 Msa0716890:three_prime_UTR 40.0%
TGAAATTGCCTTTGTTCCCA+GGG - chr5_1:10488918-10488937 None:intergenic 40.0%
TGGTCTCTAGTCTCTTACGT+TGG + chr5_1:10483161-10483180 Msa0716890:five_prime_UTR 45.0%
! GTGAATGAGTGAGTGTTGTG+TGG + chr5_1:10483195-10483214 Msa0716890:five_prime_UTR 45.0%
TGGTGAAGGGGTTAAGGTTA+TGG - chr5_1:10483234-10483253 None:intergenic 45.0%
TGAGAATGGTGAAGGGGTTA+AGG - chr5_1:10483240-10483259 None:intergenic 45.0%
AACCCCTTCACCATTCTCAT+AGG + chr5_1:10483241-10483260 Msa0716890:five_prime_UTR 45.0%
GATCTTCCCACATCTGCAAA+AGG - chr5_1:10483663-10483682 None:intergenic 45.0%
AGGGAAGAAATGACCTTGTG+AGG + chr5_1:10483875-10483894 Msa0716890:CDS 45.0%
! TGTGCAGAGGTTTTCCTGTT+TGG + chr5_1:10484068-10484087 Msa0716890:intron 45.0%
GGAACATACTTGAGCCAAAC+AGG - chr5_1:10484085-10484104 None:intergenic 45.0%
! GTTTGGCTCAAGTATGTTCC+TGG + chr5_1:10484085-10484104 Msa0716890:CDS 45.0%
! ACCAAATGGTTGAGCTCTAG+TGG + chr5_1:10484220-10484239 Msa0716890:intron 45.0%
ACCACTAGAGCTCAACCATT+TGG - chr5_1:10484224-10484243 None:intergenic 45.0%
CGACCAGATTTCAGATTACG+AGG + chr5_1:10484334-10484353 Msa0716890:intron 45.0%
! GACCCTCGTAATCTGAAATC+TGG - chr5_1:10484340-10484359 None:intergenic 45.0%
! ATTACGAGGGTCCTTTTCCT+TGG + chr5_1:10484348-10484367 Msa0716890:intron 45.0%
GAACGTCTCTATGAGTCACA+GGG + chr5_1:10484532-10484551 Msa0716890:CDS 45.0%
CACACCTGAGAGAGGATTAT+AGG - chr5_1:10484562-10484581 None:intergenic 45.0%
AAAGGTTACACACCTGAGAG+AGG - chr5_1:10484570-10484589 None:intergenic 45.0%
TCAGATTGAGAACGAGTACG+GGG + chr5_1:10484734-10484753 Msa0716890:intron 45.0%
GGGGTACAGAGTAAAATGCT+CGG + chr5_1:10484753-10484772 Msa0716890:CDS 45.0%
AGTAAAATGCTCGGACCTGT+TGG + chr5_1:10484762-10484781 Msa0716890:CDS 45.0%
ATGGCTGTTGAAATGGGAAC+TGG + chr5_1:10484813-10484832 Msa0716890:CDS 45.0%
TGGCTGTTGAAATGGGAACT+GGG + chr5_1:10484814-10484833 Msa0716890:CDS 45.0%
! GGTTCCATGGATTATGTGCA+AGG + chr5_1:10484836-10484855 Msa0716890:CDS 45.0%
AGAATGCTTACCACTGGATC+TGG - chr5_1:10484873-10484892 None:intergenic 45.0%
! CATTATGCACCGGTAACATG+TGG + chr5_1:10484918-10484937 Msa0716890:intron 45.0%
AACCCTACAAGCCTACAATG+TGG + chr5_1:10485041-10485060 Msa0716890:CDS 45.0%
GTCCACATTGTAGGCTTGTA+GGG - chr5_1:10485046-10485065 None:intergenic 45.0%
TGTCCACATTGTAGGCTTGT+AGG - chr5_1:10485047-10485066 None:intergenic 45.0%
GCAAATGCCAAATCCTGAAC+AGG - chr5_1:10485207-10485226 None:intergenic 45.0%
TCGTTCATGCAGTATCATGG+AGG + chr5_1:10485350-10485369 Msa0716890:intron 45.0%
CAGTCTAGTGAAGTGTGGTA+AGG - chr5_1:10485509-10485528 None:intergenic 45.0%
GACCCAGTTGTTACCTCATT+AGG + chr5_1:10485737-10485756 Msa0716890:CDS 45.0%
GTGGGTATTCATCCTTTCTC+AGG + chr5_1:10485835-10485854 Msa0716890:intron 45.0%
CACAGAGTCTGGAGATTGTT+CGG + chr5_1:10485871-10485890 Msa0716890:CDS 45.0%
TGCACTATAACTTACCTCCG+TGG + chr5_1:10485948-10485967 Msa0716890:CDS 45.0%
! GTTCTCATGGGAGAGTTTTG+AGG + chr5_1:10486239-10486258 Msa0716890:CDS 45.0%
TCTGAATCCTTTCTCCATGG+AGG + chr5_1:10486554-10486573 Msa0716890:CDS 45.0%
TAGGTGGACATTTCGAGACT+TGG + chr5_1:10486936-10486955 Msa0716890:CDS 45.0%
CATTTCGAGACTTGGAACAC+AGG + chr5_1:10486944-10486963 Msa0716890:CDS 45.0%
ACTTGGAACACAGGAATCCT+AGG + chr5_1:10486953-10486972 Msa0716890:CDS 45.0%
CATGGATAACAACTGGACCT+AGG - chr5_1:10486973-10486992 None:intergenic 45.0%
CTAGGTCCAGTTGTTATCCA+TGG + chr5_1:10486971-10486990 Msa0716890:CDS 45.0%
! TTGGCAGAAATGGACTTACC+AGG + chr5_1:10487021-10487040 Msa0716890:CDS 45.0%
! TCTAAACAGGTTGGGCTGAA+AGG + chr5_1:10487114-10487133 Msa0716890:intron 45.0%
GTCTGGAGATGCAAGATTCA+TGG - chr5_1:10487145-10487164 None:intergenic 45.0%
TCTACAGAAGAGATACCGTC+TGG - chr5_1:10487162-10487181 None:intergenic 45.0%
ACGGTATCTCTTCTGTAGAG+TGG + chr5_1:10487163-10487182 Msa0716890:CDS 45.0%
TTCTGTAGAGTGGATGCAGT+CGG + chr5_1:10487173-10487192 Msa0716890:CDS 45.0%
! AGAGCCATTGGCATTGGATA+TGG + chr5_1:10487346-10487365 Msa0716890:CDS 45.0%
! CCATTGGCATTGGATATGGA+CGG + chr5_1:10487350-10487369 Msa0716890:CDS 45.0%
GCATTGGATATGGACGGTAT+GGG + chr5_1:10487356-10487375 Msa0716890:CDS 45.0%
GATATGGACGGTATGGGTAA+AGG + chr5_1:10487362-10487381 Msa0716890:CDS 45.0%
TACTGGACTGCTATAGCTAC+TGG + chr5_1:10487419-10487438 Msa0716890:CDS 45.0%
TGCAATGACTGCAACTATGC+CGG + chr5_1:10487446-10487465 Msa0716890:CDS 45.0%
! CTTTGGAGGTCTAAATGACC+CGG - chr5_1:10487468-10487487 None:intergenic 45.0%
TAAACTTACCATCGCTGGGT+TGG - chr5_1:10487512-10487531 None:intergenic 45.0%
!! TGTTTTTGAGGAACTTGGGG+GGG + chr5_1:10487657-10487676 Msa0716890:CDS 45.0%
!! GCAAGTGAACTTTTGGAGGA+TGG - chr5_1:10487801-10487820 None:intergenic 45.0%
ATGGTTGAGTTACCTGCTCT+AGG - chr5_1:10487939-10487958 None:intergenic 45.0%
GCTTCAATACATTCGGACAC+AGG - chr5_1:10488211-10488230 None:intergenic 45.0%
!! CAATTTTGGCCCCCATGTTT+AGG + chr5_1:10488557-10488576 Msa0716890:intron 45.0%
!!! TGCGATTATGGCCCCTTTTT+TGG + chr5_1:10488649-10488668 Msa0716890:intron 45.0%
!!! GCGATTATGGCCCCTTTTTT+GGG + chr5_1:10488650-10488669 Msa0716890:intron 45.0%
ATGCCACGTGTCCCAAAAAA+GGG - chr5_1:10488664-10488683 None:intergenic 45.0%
GAAACCAGGGGTCTAAGAAT+TGG + chr5_1:10488826-10488845 Msa0716890:three_prime_UTR 45.0%
CTGAAATTGCCTTTGTTCCC+AGG - chr5_1:10488919-10488938 None:intergenic 45.0%
! CATACATCTGGGGTGCTTCT+AGG - chr5_1:10483550-10483569 None:intergenic 50.0%
! AGGGTCCTTTTCCTTGGAAC+CGG + chr5_1:10484354-10484373 Msa0716890:intron 50.0%
! TCCTTTTCCTTGGAACCGGA+GGG + chr5_1:10484358-10484377 Msa0716890:intron 50.0%
CGAACGTCTCTATGAGTCAC+AGG + chr5_1:10484531-10484550 Msa0716890:CDS 50.0%
TGGCCCTATAATCCTCTCTC+AGG + chr5_1:10484555-10484574 Msa0716890:CDS 50.0%
TATGAGCTGGGCTGCGAAAA+TGG + chr5_1:10484794-10484813 Msa0716890:CDS 50.0%
GGCTGTTGAAATGGGAACTG+GGG + chr5_1:10484815-10484834 Msa0716890:CDS 50.0%
AAATGGGAACTGGGGTTCCA+TGG + chr5_1:10484823-10484842 Msa0716890:CDS 50.0%
AGATGATGCTCCAGATCCAG+TGG + chr5_1:10484860-10484879 Msa0716890:CDS 50.0%
CAAGCCTACAATGTGGACAG+AGG + chr5_1:10485048-10485067 Msa0716890:CDS 50.0%
CAAGCCTCTGTCCACATTGT+AGG - chr5_1:10485055-10485074 None:intergenic 50.0%
CTACAATGTGGACAGAGGCT+TGG + chr5_1:10485053-10485072 Msa0716890:CDS 50.0%
!! ACAAATTTTGGCCGCACAGC+TGG + chr5_1:10485374-10485393 Msa0716890:CDS 50.0%
TAAAAGGACCTCCAGCTGTG+CGG - chr5_1:10485388-10485407 None:intergenic 50.0%
CAGCTCACAACAGTATCCAC+AGG + chr5_1:10485577-10485596 Msa0716890:intron 50.0%
GTATCCACAGGCTACATTGC+CGG + chr5_1:10485589-10485608 Msa0716890:intron 50.0%
GGAACTTACGGAGCAGTGAA+AGG - chr5_1:10485802-10485821 None:intergenic 50.0%
CGAACAATCTCCAGACTCTG+TGG - chr5_1:10485873-10485892 None:intergenic 50.0%
CAGCATTTCTACAATCCGGG+AGG - chr5_1:10485985-10486004 None:intergenic 50.0%
AGGTTCTGCCTATGGAACGA+GGG + chr5_1:10486728-10486747 Msa0716890:intron 50.0%
GGCGATGTAAATCTTCGTGC+TGG + chr5_1:10486774-10486793 Msa0716890:CDS 50.0%
! GCTTTGCTCAGTGTTGCTGT+TGG + chr5_1:10486810-10486829 Msa0716890:CDS 50.0%
GTGCTGTCAAAGAACGTAGG+TGG + chr5_1:10486920-10486939 Msa0716890:intron 50.0%
AGTACCTTGTGCCATGTCAG+TGG - chr5_1:10487222-10487241 None:intergenic 50.0%
TCCTGAAGGAGAAGAGCCAT+TGG + chr5_1:10487334-10487353 Msa0716890:CDS 50.0%
AGGAGAAGAGCCATTGGCAT+TGG + chr5_1:10487340-10487359 Msa0716890:CDS 50.0%
CCGTCCATATCCAATGCCAA+TGG - chr5_1:10487353-10487372 None:intergenic 50.0%
! GGCATTGGATATGGACGGTA+TGG + chr5_1:10487355-10487374 Msa0716890:CDS 50.0%
GCAATGACTGCAACTATGCC+GGG + chr5_1:10487447-10487466 Msa0716890:CDS 50.0%
TTGGTTGACCACAACCAAGC+TGG - chr5_1:10487493-10487512 None:intergenic 50.0%
TCAACCAAGATCGCGGTACA+TGG - chr5_1:10487615-10487634 None:intergenic 50.0%
!! TGCAAGCTTTGGAACTCCGT+TGG + chr5_1:10487858-10487877 Msa0716890:CDS 50.0%
!! GCAAGCTTTGGAACTCCGTT+GGG + chr5_1:10487859-10487878 Msa0716890:CDS 50.0%
TAACTCCCACAGGTTCCCAA+CGG - chr5_1:10487877-10487896 None:intergenic 50.0%
TATGTTGTGCCCAAGGCACA+TGG + chr5_1:10488412-10488431 Msa0716890:three_prime_UTR 50.0%
TGCCACGTGTCCCAAAAAAG+GGG - chr5_1:10488663-10488682 None:intergenic 50.0%
GATGCCACGTGTCCCAAAAA+AGG - chr5_1:10488665-10488684 None:intergenic 50.0%
TGATATGGCCCTGGGAACAA+AGG + chr5_1:10488907-10488926 Msa0716890:three_prime_UTR 50.0%
! GTCCTTTTCCTTGGAACCGG+AGG + chr5_1:10484357-10484376 Msa0716890:intron 55.0%
ACCCTCCGGTTCCAAGGAAA+AGG - chr5_1:10484362-10484381 None:intergenic 55.0%
GTCTTAACCCTCCGGTTCCA+AGG - chr5_1:10484368-10484387 None:intergenic 55.0%
CGTCTCTATGAGTCACAGGG+TGG + chr5_1:10484535-10484554 Msa0716890:CDS 55.0%
ATGTGGACAGAGGCTTGGAG+TGG + chr5_1:10485058-10485077 Msa0716890:CDS 55.0%
!! AATTTTGGCCGCACAGCTGG+AGG + chr5_1:10485377-10485396 Msa0716890:CDS 55.0%
ACAATCCGGGAGGATGCTGA+CGG - chr5_1:10485975-10485994 None:intergenic 55.0%
CAGGTTCTGCCTATGGAACG+AGG + chr5_1:10486727-10486746 Msa0716890:intron 55.0%
TTCTGCCTATGGAACGAGGG+AGG + chr5_1:10486731-10486750 Msa0716890:CDS 55.0%
CCTATCCTCCCTCGTTCCAT+AGG - chr5_1:10486739-10486758 None:intergenic 55.0%
CCTATGGAACGAGGGAGGAT+AGG + chr5_1:10486736-10486755 Msa0716890:CDS 55.0%
! ACAGGTTGGGCTGAAAGGAG+AGG + chr5_1:10487119-10487138 Msa0716890:intron 55.0%
TCAGCCACTGACATGGCACA+AGG + chr5_1:10487215-10487234 Msa0716890:CDS 55.0%
GCCAATGGCTCTTCTCCTTC+AGG - chr5_1:10487338-10487357 None:intergenic 55.0%
! AGACCTCCAAAGTGCCAGCT+TGG + chr5_1:10487476-10487495 Msa0716890:CDS 55.0%
CAACCAAGCTGGCACTTTGG+AGG - chr5_1:10487482-10487501 None:intergenic 55.0%
CCACAACCAAGCTGGCACTT+TGG - chr5_1:10487485-10487504 None:intergenic 55.0%
! CCAAAGTGCCAGCTTGGTTG+TGG + chr5_1:10487482-10487501 Msa0716890:CDS 55.0%
GGTACCATGTACCGCGATCT+TGG + chr5_1:10487608-10487627 Msa0716890:intron 55.0%
! ATGGAAGAGATGGCTTGGCC+AGG - chr5_1:10487832-10487851 None:intergenic 55.0%
GAACTCCGTTGGGAACCTGT+GGG + chr5_1:10487869-10487888 Msa0716890:CDS 55.0%
ACCTGTGGGAGTTACGAGCA+AGG + chr5_1:10487883-10487902 Msa0716890:CDS 55.0%
TCCTTGCTCGTAACTCCCAC+AGG - chr5_1:10487887-10487906 None:intergenic 55.0%
GGGTCCAATTCTTAGACCCC+TGG - chr5_1:10488833-10488852 None:intergenic 55.0%
GGGTACTCGAGCATGAACCC+TGG + chr5_1:10484276-10484295 Msa0716890:intron 60.0%
TCCACAGGCTACATTGCCGG+AGG + chr5_1:10485592-10485611 Msa0716890:intron 60.0%
TCCTCCGGCAATGTAGCCTG+TGG - chr5_1:10485596-10485615 None:intergenic 60.0%
GCGCTTGCCTCCATGGAGAA+AGG - chr5_1:10486564-10486583 None:intergenic 60.0%
GTGGTCAACCAACCCAGCGA+TGG + chr5_1:10487501-10487520 Msa0716890:CDS 60.0%
GGAACTCCGTTGGGAACCTG+TGG + chr5_1:10487868-10487887 Msa0716890:CDS 60.0%
!!! GGCCCCTTTTTTGGGACACG+TGG + chr5_1:10488658-10488677 Msa0716890:intron 60.0%
GGACAGAGGCTTGGAGTGGC+TGG + chr5_1:10485062-10485081 Msa0716890:CDS 65.0%
! AGGATGCTGACGGACCACGG+AGG - chr5_1:10485965-10485984 None:intergenic 65.0%
! GGGAGGATGCTGACGGACCA+CGG - chr5_1:10485968-10485987 None:intergenic 65.0%
GTGGTCCGTCAGCATCCTCC+CGG + chr5_1:10485967-10485986 Msa0716890:CDS 65.0%
! GACTGGGGCGCTTGCCTCCA+TGG - chr5_1:10486571-10486590 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10483107 10489148 10483107 ID=Msa0716890;Name=Msa0716890
chr5_1 mRNA 10483107 10489148 10483107 ID=Msa0716890-mRNA-1;Parent=Msa0716890;Name=Msa0716890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=293|1|1|1|0.94|0.9|20|561|843
chr5_1 exon 10483107 10483564 10483107 ID=Msa0716890-mRNA-1:exon:4185;Parent=Msa0716890-mRNA-1
chr5_1 exon 10483670 10483765 10483670 ID=Msa0716890-mRNA-1:exon:4186;Parent=Msa0716890-mRNA-1
chr5_1 exon 10483865 10483977 10483865 ID=Msa0716890-mRNA-1:exon:4187;Parent=Msa0716890-mRNA-1
chr5_1 exon 10484075 10484141 10484075 ID=Msa0716890-mRNA-1:exon:4188;Parent=Msa0716890-mRNA-1
chr5_1 exon 10484484 10484576 10484484 ID=Msa0716890-mRNA-1:exon:4189;Parent=Msa0716890-mRNA-1
chr5_1 exon 10484738 10484881 10484738 ID=Msa0716890-mRNA-1:exon:4190;Parent=Msa0716890-mRNA-1
chr5_1 exon 10484995 10485083 10484995 ID=Msa0716890-mRNA-1:exon:4191;Parent=Msa0716890-mRNA-1
chr5_1 exon 10485170 10485275 10485170 ID=Msa0716890-mRNA-1:exon:4192;Parent=Msa0716890-mRNA-1
chr5_1 exon 10485362 10485449 10485362 ID=Msa0716890-mRNA-1:exon:4193;Parent=Msa0716890-mRNA-1
chr5_1 exon 10485654 10485772 10485654 ID=Msa0716890-mRNA-1:exon:4194;Parent=Msa0716890-mRNA-1
chr5_1 exon 10485857 10486021 10485857 ID=Msa0716890-mRNA-1:exon:4195;Parent=Msa0716890-mRNA-1
chr5_1 exon 10486189 10486364 10486189 ID=Msa0716890-mRNA-1:exon:4196;Parent=Msa0716890-mRNA-1
chr5_1 exon 10486538 10486647 10486538 ID=Msa0716890-mRNA-1:exon:4197;Parent=Msa0716890-mRNA-1
chr5_1 exon 10486730 10486839 10486730 ID=Msa0716890-mRNA-1:exon:4198;Parent=Msa0716890-mRNA-1
chr5_1 exon 10486932 10487042 10486932 ID=Msa0716890-mRNA-1:exon:4199;Parent=Msa0716890-mRNA-1
chr5_1 exon 10487123 10487236 10487123 ID=Msa0716890-mRNA-1:exon:4200;Parent=Msa0716890-mRNA-1
chr5_1 exon 10487320 10487522 10487320 ID=Msa0716890-mRNA-1:exon:4201;Parent=Msa0716890-mRNA-1
chr5_1 exon 10487609 10487945 10487609 ID=Msa0716890-mRNA-1:exon:4202;Parent=Msa0716890-mRNA-1
chr5_1 exon 10488149 10488480 10488149 ID=Msa0716890-mRNA-1:exon:4203;Parent=Msa0716890-mRNA-1
chr5_1 exon 10488794 10489148 10488794 ID=Msa0716890-mRNA-1:exon:4204;Parent=Msa0716890-mRNA-1
chr5_1 five_prime_UTR 10483107 10483399 10483107 ID=Msa0716890-mRNA-1:five_prime_utr;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10483400 10483564 10483400 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10483670 10483765 10483670 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10483865 10483977 10483865 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10484075 10484141 10484075 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10484484 10484576 10484484 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10484738 10484881 10484738 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10484995 10485083 10484995 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10485170 10485275 10485170 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10485362 10485449 10485362 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10485654 10485772 10485654 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10485857 10486021 10485857 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10486189 10486364 10486189 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10486538 10486647 10486538 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10486730 10486839 10486730 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10486932 10487042 10486932 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10487123 10487236 10487123 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10487320 10487522 10487320 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10487609 10487945 10487609 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 CDS 10488149 10488274 10488149 ID=Msa0716890-mRNA-1:cds;Parent=Msa0716890-mRNA-1
chr5_1 three_prime_UTR 10488275 10488480 10488275 ID=Msa0716890-mRNA-1:three_prime_utr;Parent=Msa0716890-mRNA-1
chr5_1 three_prime_UTR 10488794 10489148 10488794 ID=Msa0716890-mRNA-1:three_prime_utr;Parent=Msa0716890-mRNA-1
Gene Sequence

>Msa0716890

ATGGAAACTACCTCAGTTTCCAAATTTCTGTTTCTTTTTGTTTCCCTTACATTGTTCTCAGTTGTTTACTCTGATGTTACATATGACAGAAAAGCCATTATCATCAATGGCCAAAGAAGAATCCTTTTTTCTGGTTCCATACATTATCCTAGAAGCACCCCAGATATGTGGGAAGATCTGATTTTCAAAGCTAAAGAAGGAGGTTTGGATGTAATTGAAACCTATGTGTTTTGGAATGTTCATGAACCTTCTCCTGGAAATTACAATTTTGAGGGAAGAAATGACCTTGTGAGGTTTATTCAGACAGTGCATAAAGCAGGACTATATGCTCATCTAAGGATTGGACCTTATGTTTGTGCTGAATGGAATTTTGGAGGTTTTCCTGTTTGGCTCAAGTATGTTCCTGGCATAAGCTTTAGACAAGACAATGAACCTTTCAAGAAAGCAATGCAAGGGTTCACTGAGAAAATTGTGGGAATGATGAAGAGCGAACGTCTCTATGAGTCACAGGGTGGCCCTATAATCCTCTCTCAGATTGAGAACGAGTACGGGGTACAGAGTAAAATGCTCGGACCTGTTGGCTATAATTATATGAGCTGGGCTGCGAAAATGGCTGTTGAAATGGGAACTGGGGTTCCATGGATTATGTGCAAGGAAGATGATGCTCCAGATCCAGTGATAAACACCTGCAATGGCTTTTATTGTGATAAATTTACTCCCAATAAACCCTACAAGCCTACAATGTGGACAGAGGCTTGGAGTGGCTGGTTTTCAGAATTCGGAGGTCCAATTCACAAAAGACCTGTTCAGGATTTGGCATTTGCAGTAGCCCGATTTATACAAAAAGGAGGATCCTTTGTAAACTACTACATGTATCATGGAGGAACAAATTTTGGCCGCACAGCTGGAGGTCCTTTTATCACTACCAGCTATGATTATGATGCTCCACTAGATGAATATGGTTTAATTAGGCAACCAAAGTATGGTCATCTAAAGGAGCTTCATAAGGCTATTAAGATGTGTGAGAAAGCTTTAATTTCAACCGACCCAGTTGTTACCTCATTAGGAAACTTCCAACAGGCTTATGTATACACCACAGAGTCTGGAGATTGTTCGGCTTTTCTCTCAAACTATGACTCCAAATCTTCTGCAAGAGTGATGTTCAACAATATGCACTATAACTTACCTCCGTGGTCCGTCAGCATCCTCCCGGATTGTAGAAATGCTGTTTTTAACACAGCAAAGGTTGGAGTGCAAACATCTCAAATGCAAATGTTGCCTACAAATAGTGAGAGGTTCTCATGGGAGAGTTTTGAGGAAGATACTTCTTCTAGTTCTGCAACTACAATAACTGCTTCTGGTCTCTTGGAACAGATAAACGTAACGAGGGATACAAGTGATTATCTTTGGTATATAACTAGTGTTGATGTAGGTTCATCTGAATCCTTTCTCCATGGAGGCAAGCGCCCCAGTCTCATTGTTCAGTCAACTGGGCATGCTGTGCATGTTTTCATCAATGGTCGACTTTCCGGTTCTGCCTATGGAACGAGGGAGGATAGGAGATTCAGATACACTGGCGATGTAAATCTTCGTGCTGGAACAAACACTATAGCTTTGCTCAGTGTTGCTGTTGGACTTCCAAACGTAGGTGGACATTTCGAGACTTGGAACACAGGAATCCTAGGTCCAGTTGTTATCCATGGACTTGATAAGGGAAAGTTGGATTTGTCTTGGCAGAAATGGACTTACCAGGTTGGGCTGAAAGGAGAGGCCATGAATCTTGCATCTCCAGACGGTATCTCTTCTGTAGAGTGGATGCAGTCGGCGTTAGTTGTACAAAGAAATCAGCCACTGACATGGCACAAGACTTTTTTCGATGCTCCTGAAGGAGAAGAGCCATTGGCATTGGATATGGACGGTATGGGTAAAGGTCAAATATGGATTAATGGGATAAGTATCGGAAGATACTGGACTGCTATAGCTACTGGTAGTTGCAATGACTGCAACTATGCCGGGTCATTTAGACCTCCAAAGTGCCAGCTTGGTTGTGGTCAACCAACCCAGCGATGGTACCATGTACCGCGATCTTGGTTGAAGCAAAATCATAATCTGTTAGTTGTTTTTGAGGAACTTGGGGGGGACCCTTCAAAAATTTCATTAGCAAAGAGATCAGTGAGCAGTGTGTGCGCTGATGTATCAGAGTATCATCCTAATCTTAAGAATTGGCACATTGATAGTTATGGAAAATCGGAAAATTTCCATCCTCCAAAAGTTCACTTGCATTGTAATCCTGGCCAAGCCATCTCTTCCATTAAATTTGCAAGCTTTGGAACTCCGTTGGGAACCTGTGGGAGTTACGAGCAAGGAGCTTGTCATTCTTCTGCATCTTATGACATCCTAGAGCAGAAATGTATAGGAAAGCCAAGATGCATAGTAACTGTATCAAACAGTAATTTTGGGCGAGACCTGTGTCCGAATGTATTGAAGCGGTTATCAGTTGAAGCTGTTTGCGCTCCGACTATTTCCAATTAA
Protein sequence

>Msa0716890

METTSVSKFLFLFVSLTLFSVVYSDVTYDRKAIIINGQRRILFSGSIHYPRSTPDMWEDLIFKAKEGGLDVIETYVFWNVHEPSPGNYNFEGRNDLVRFIQTVHKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRQDNEPFKKAMQGFTEKIVGMMKSERLYESQGGPIILSQIENEYGVQSKMLGPVGYNYMSWAAKMAVEMGTGVPWIMCKEDDAPDPVINTCNGFYCDKFTPNKPYKPTMWTEAWSGWFSEFGGPIHKRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKELHKAIKMCEKALISTDPVVTSLGNFQQAYVYTTESGDCSAFLSNYDSKSSARVMFNNMHYNLPPWSVSILPDCRNAVFNTAKVGVQTSQMQMLPTNSERFSWESFEEDTSSSSATTITASGLLEQINVTRDTSDYLWYITSVDVGSSESFLHGGKRPSLIVQSTGHAVHVFINGRLSGSAYGTREDRRFRYTGDVNLRAGTNTIALLSVAVGLPNVGGHFETWNTGILGPVVIHGLDKGKLDLSWQKWTYQVGLKGEAMNLASPDGISSVEWMQSALVVQRNQPLTWHKTFFDAPEGEEPLALDMDGMGKGQIWINGISIGRYWTAIATGSCNDCNYAGSFRPPKCQLGCGQPTQRWYHVPRSWLKQNHNLLVVFEELGGDPSKISLAKRSVSSVCADVSEYHPNLKNWHIDSYGKSENFHPPKVHLHCNPGQAISSIKFASFGTPLGTCGSYEQGACHSSASYDILEQKCIGKPRCIVTVSNSNFGRDLCPNVLKRLSVEAVCAPTISN*