Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532060 | XP_039684908.1 | 75.000 | 428 | 55 | 2 | 51 | 426 | 5 | 432 | 0.0 | 589 |
| Msa0532060 | XP_039684908.1 | 86.111 | 900 | 62 | 4 | 1 | 899 | 6 | 843 | 0.0 | 1494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532060 | A0A396GNM2 | 86.000 | 900 | 62 | 5 | 1 | 899 | 1 | 837 | 0.0 | 1486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0532060 | 0.821858 | 3.228629e-53 | -8.615850e-47 |
| Msa0055040 | Msa0532060 | 0.815637 | 8.350011e-52 | -8.615850e-47 |
| Msa0068680 | Msa0532060 | 0.817006 | 4.124521e-52 | -8.615850e-47 |
| Msa0077610 | Msa0532060 | 0.831042 | 2.089149e-55 | -8.615850e-47 |
| Msa0077670 | Msa0532060 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0079080 | Msa0532060 | 0.805241 | 1.467727e-49 | -8.615850e-47 |
| Msa0086760 | Msa0532060 | 0.807122 | 5.897018e-50 | -8.615850e-47 |
| Msa0101810 | Msa0532060 | -0.823326 | 1.471223e-53 | -8.615850e-47 |
| Msa0113790 | Msa0532060 | 0.800269 | 1.560214e-48 | -8.615850e-47 |
| Msa0140780 | Msa0532060 | 0.821201 | 4.578475e-53 | -8.615850e-47 |
| Msa0157290 | Msa0532060 | 0.821879 | 3.192424e-53 | -8.615850e-47 |
| Msa0157310 | Msa0532060 | 0.828277 | 9.832102e-55 | -8.615850e-47 |
| Msa0179580 | Msa0532060 | 0.838450 | 2.854919e-57 | -8.615850e-47 |
| Msa0188830 | Msa0532060 | 0.825650 | 4.176442e-54 | -8.615850e-47 |
| Msa0200260 | Msa0532060 | 0.803078 | 4.138174e-49 | -8.615850e-47 |
| Msa0216910 | Msa0532060 | 0.823271 | 1.515008e-53 | -8.615850e-47 |
| Msa0220580 | Msa0532060 | 0.805374 | 1.377023e-49 | -8.615850e-47 |
| Msa0230690 | Msa0532060 | 0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0237660 | Msa0532060 | 0.826034 | 3.384953e-54 | -8.615850e-47 |
| Msa0393080 | Msa0532060 | 0.811916 | 5.510808e-51 | -8.615850e-47 |
| Msa0440750 | Msa0532060 | 0.822632 | 2.135075e-53 | -8.615850e-47 |
| Msa0243100 | Msa0532060 | 0.817253 | 3.629084e-52 | -8.615850e-47 |
| Msa0265380 | Msa0532060 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
| Msa0270100 | Msa0532060 | 0.808333 | 3.260456e-50 | -8.615850e-47 |
| Msa0278520 | Msa0532060 | 0.801602 | 8.331750e-49 | -8.615850e-47 |
| Msa0287650 | Msa0532060 | 0.823541 | 1.310143e-53 | -8.615850e-47 |
| Msa0291540 | Msa0532060 | 0.815018 | 1.146196e-51 | -8.615850e-47 |
| Msa0310750 | Msa0532060 | 0.810308 | 1.229481e-50 | -8.615850e-47 |
| Msa0338000 | Msa0532060 | 0.816947 | 4.252910e-52 | -8.615850e-47 |
| Msa0345970 | Msa0532060 | 0.830483 | 2.862598e-55 | -8.615850e-47 |
| Msa0357340 | Msa0532060 | 0.803909 | 2.782792e-49 | -8.615850e-47 |
| Msa0488560 | Msa0532060 | 0.812580 | 3.946589e-51 | -8.615850e-47 |
| Msa0507680 | Msa0532060 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0509610 | Msa0532060 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0515010 | Msa0532060 | 0.804932 | 1.703995e-49 | -8.615850e-47 |
| Msa0532060 | Msa0532170 | 0.990806 | 2.043968e-184 | -8.615850e-47 |
| Msa0532060 | Msa0536220 | 0.814027 | 1.898784e-51 | -8.615850e-47 |
| Msa0532060 | Msa0555020 | 0.832592 | 8.657495e-56 | -8.615850e-47 |
| Msa0532060 | Msa0563840 | 0.803838 | 2.879297e-49 | -8.615850e-47 |
| Msa0532060 | Msa0577500 | 0.807959 | 3.918160e-50 | -8.615850e-47 |
| Msa0532060 | Msa0608620 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0532060 | Msa0621490 | 0.818627 | 1.776086e-52 | -8.615850e-47 |
| Msa0532060 | Msa0648880 | 0.840466 | 8.550592e-58 | -8.615850e-47 |
| Msa0532060 | Msa0657610 | 0.815605 | 8.484319e-52 | -8.615850e-47 |
| Msa0532060 | Msa0657970 | 0.815654 | 8.273988e-52 | -8.615850e-47 |
| Msa0532060 | Msa0669320 | 0.801909 | 7.208447e-49 | -8.615850e-47 |
| Msa0532060 | Msa0669440 | 0.818158 | 2.267847e-52 | -8.615850e-47 |
| Msa0532060 | Msa0691380 | 0.852388 | 4.770641e-61 | -8.615850e-47 |
| Msa0532060 | Msa0692230 | 0.802755 | 4.827010e-49 | -8.615850e-47 |
| Msa0532060 | Msa0701900 | 0.835312 | 1.805465e-56 | -8.615850e-47 |
| Msa0532060 | Msa0724210 | 0.800974 | 1.120190e-48 | -8.615850e-47 |
| Msa0532060 | Msa0790510 | 0.814676 | 1.364702e-51 | -8.615850e-47 |
| Msa0532060 | Msa0796700 | 0.817232 | 3.668723e-52 | -8.615850e-47 |
| Msa0532060 | Msa0830530 | 0.811006 | 8.685342e-51 | -8.615850e-47 |
| Msa0532060 | Msa0845400 | 0.845727 | 3.390617e-59 | -8.615850e-47 |
| Msa0532060 | Msa0867890 | 0.806305 | 8.773415e-50 | -8.615850e-47 |
| Msa0532060 | Msa0880140 | 0.820340 | 7.223930e-53 | -8.615850e-47 |
| Msa0532060 | Msa0923540 | 0.802031 | 6.804126e-49 | -8.615850e-47 |
| Msa0532060 | Msa0945970 | 0.806338 | 8.635885e-50 | -8.615850e-47 |
| Msa0532060 | Msa0947660 | 0.801511 | 8.698809e-49 | -8.615850e-47 |
| Msa0532060 | Msa1003620 | 0.807529 | 4.833874e-50 | -8.615850e-47 |
| Msa0532060 | Msa1018100 | 0.834606 | 2.720287e-56 | -8.615850e-47 |
| Msa0532060 | Msa1044420 | 0.826857 | 2.154914e-54 | -8.615850e-47 |
| Msa0532060 | Msa1045200 | 0.803925 | 2.761903e-49 | -8.615850e-47 |
| Msa0532060 | Msa1075220 | -0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa0532060 | Msa1075540 | 0.800311 | 1.529956e-48 | -8.615850e-47 |
| Msa0532060 | Msa1082500 | 0.805025 | 1.628990e-49 | -8.615850e-47 |
| Msa0532060 | Msa1111110 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
| Msa0532060 | Msa1116130 | -0.829118 | 6.155038e-55 | -8.615850e-47 |
| Msa0532060 | Msa1124050 | 0.813234 | 2.837240e-51 | -8.615850e-47 |
| Msa0532060 | Msa1130360 | 0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa0532060 | Msa1139000 | -0.801997 | 6.913933e-49 | -8.615850e-47 |
| Msa0532060 | Msa1157930 | -0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0532060 | Msa1169090 | 0.817854 | 2.657032e-52 | -8.615850e-47 |
| Msa0532060 | Msa1170280 | 0.807607 | 4.654651e-50 | -8.615850e-47 |
| Msa0532060 | Msa1203250 | 0.824854 | 6.439889e-54 | -8.615850e-47 |
| Msa0532060 | Msa1214480 | 0.800884 | 1.169015e-48 | -8.615850e-47 |
| Msa0532060 | Msa1239720 | 0.813949 | 1.975236e-51 | -8.615850e-47 |
| Msa0532060 | Msa1270610 | 0.831923 | 1.267545e-55 | -8.615850e-47 |
| Msa0532060 | Msa1271300 | 0.830558 | 2.745424e-55 | -8.615850e-47 |
| Msa0532060 | Msa1283840 | 0.810673 | 1.025509e-50 | -8.615850e-47 |
| Msa0532060 | Msa1283860 | 0.822171 | 2.732512e-53 | -8.615850e-47 |
| Msa0532060 | Msa1284260 | 0.824095 | 9.719492e-54 | -8.615850e-47 |
| Msa0532060 | Msa1287460 | 0.801954 | 7.054616e-49 | -8.615850e-47 |
| Msa0532060 | Msa1306840 | 0.803448 | 3.469464e-49 | -8.615850e-47 |
| Msa0532060 | Msa1322860 | 0.820877 | 5.437750e-53 | -8.615850e-47 |
| Msa0532060 | Msa1322890 | 0.825501 | 4.529072e-54 | -8.615850e-47 |
| Msa0532060 | Msa1327050 | 0.833538 | 5.034278e-56 | -8.615850e-47 |
| Msa0532060 | Msa1327680 | 0.835862 | 1.310327e-56 | -8.615850e-47 |
| Msa0532060 | Msa1346370 | 0.811874 | 5.626893e-51 | -8.615850e-47 |
| Msa0532060 | Msa1384350 | 0.815048 | 1.128518e-51 | -8.615850e-47 |
| Msa0532060 | Msa1392260 | 0.819684 | 1.020823e-52 | -8.615850e-47 |
| Msa0532060 | Msa1426000 | 0.808374 | 3.196565e-50 | -8.615850e-47 |
| Msa0532060 | Msa1427820 | 0.806090 | 9.737368e-50 | -8.615850e-47 |
| Msa0532060 | Msa1429900 | 0.824005 | 1.020345e-53 | -8.615850e-47 |
| Msa0532060 | Msa1460050 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa0532060 | Msa1461300 | 0.808466 | 3.055316e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532060 | MtrunA17_Chr8g0380341 | 86.000 | 900 | 62 | 5 | 1 | 899 | 1 | 837 | 0.0 | 1486 |
| Msa0532060 | MtrunA17_Chr1g0206371 | 45.909 | 220 | 98 | 3 | 501 | 719 | 35 | 234 | 4.83e-54 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 224 sgRNAs with CRISPR-Local
Find 635 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGATGTCTTATTATTAA+TGG | 0.147847 | 4_1:-6091824 | Msa0532060:intron |
| CTTCCCAACCACCGACTTAA+AGG | 0.208074 | 4_1:+6089168 | None:intergenic |
| CGCTAGGAGCATCTATGTTT+TGG | 0.227456 | 4_1:-6088516 | Msa0532060:three_prime_UTR |
| AAGATGTGATAACAGATATT+AGG | 0.229248 | 4_1:-6088692 | Msa0532060:CDS |
| TTAAATTGAAATAATTTCTA+TGG | 0.263337 | 4_1:-6096133 | Msa0532060:five_prime_UTR |
| ATGAAAATGAAAGCAGAAAA+TGG | 0.263656 | 4_1:+6096248 | None:intergenic |
| CGATCTCTCAAATTTCTCTT+TGG | 0.266239 | 4_1:+6094511 | None:intergenic |
| TTTGATTTATCATGTAAATA+TGG | 0.274747 | 4_1:-6088587 | Msa0532060:three_prime_UTR |
| TCAACTTCAAATTCATTTGA+TGG | 0.278093 | 4_1:+6093697 | None:intergenic |
| ATGGTACCTGAAAATGAATT+TGG | 0.279902 | 4_1:+6096023 | None:intergenic |
| TCATTACAAATATTGCTAAA+TGG | 0.287507 | 4_1:+6088364 | None:intergenic |
| TGATAATCCATCAAATGATT+TGG | 0.297456 | 4_1:-6093327 | Msa0532060:CDS |
| CATTCTCTGCCTCCACCCTT+TGG | 0.298562 | 4_1:+6089059 | None:intergenic |
| TTCAATGGTTCTATAGTTCA+TGG | 0.308159 | 4_1:-6091691 | Msa0532060:CDS |
| TGATAATATATCAAATGAAT+TGG | 0.317818 | 4_1:-6094801 | Msa0532060:CDS |
| CAATCATATATGCAGGGTTT+TGG | 0.318781 | 4_1:-6089145 | Msa0532060:CDS |
| TGATAACCCATCAAATGAAT+TGG | 0.321881 | 4_1:-6094425 | Msa0532060:CDS |
| AGCCTGATTTGCAGACATTA+TGG | 0.326446 | 4_1:-6089442 | Msa0532060:CDS |
| CTCTTGCTTCTCTACAAACT+TGG | 0.328148 | 4_1:+6094040 | None:intergenic |
| AGCTAGATATCGCTTGTATT+AGG | 0.333158 | 4_1:-6088661 | Msa0532060:exon |
| CAGAAAATGGCTCAAGTAAC+GGG | 0.333349 | 4_1:+6096261 | None:intergenic |
| TAATAATCCATCATTTGAAT+TGG | 0.339315 | 4_1:-6095913 | Msa0532060:CDS |
| GGCCTTAGTTTACTAAAATC+TGG | 0.343168 | 4_1:+6096283 | None:intergenic |
| TTTGAATTGGAAGTTGATCT+TGG | 0.349340 | 4_1:-6095900 | Msa0532060:CDS |
| ATGGCAGATAACACACAAAA+AGG | 0.350267 | 4_1:-6089423 | Msa0532060:CDS |
| TGCCATAATGTCTGCAAATC+AGG | 0.351649 | 4_1:+6089440 | None:intergenic |
| TTCAGAAGACTTGACGCTTT+AGG | 0.351852 | 4_1:+6095975 | None:intergenic |
| ATTCTCTGCCTCCACCCTTT+GGG | 0.352470 | 4_1:+6089060 | None:intergenic |
| TTCAAAAGACTTGACGCTTT+AGG | 0.353871 | 4_1:+6094134 | None:intergenic |
| GGAGAATCAATCAAATGAAT+TGG | 0.357053 | 4_1:-6092830 | Msa0532060:CDS |
| TCAACTTCCAATTCATTTGA+TGG | 0.360973 | 4_1:+6094418 | None:intergenic |
| GCAACTTCCAACTCATTTGA+TGG | 0.361666 | 4_1:+6092874 | None:intergenic |
| TTCTGAAGACTTGACACTTT+AGG | 0.365515 | 4_1:+6092943 | None:intergenic |
| TTCTGAAGAGTAGACGCTTT+AGG | 0.365624 | 4_1:+6094487 | None:intergenic |
| TGCTGAAGACTTGACGCTTT+AGG | 0.365823 | 4_1:+6095242 | None:intergenic |
| TTCTGAAGACTTGACGCTTT+AGG | 0.367145 | 4_1:+6094863 | None:intergenic |
| TTCTGATTCATTGACCCTCT+TGG | 0.369587 | 4_1:+6091756 | None:intergenic |
| TGAGTCTGATTGGAAATTCT+TGG | 0.369640 | 4_1:-6089782 | Msa0532060:CDS |
| TCAACTTCCAAATCATTTGA+TGG | 0.372340 | 4_1:+6093320 | None:intergenic |
| TCAGACTCATTGACGTCATC+AGG | 0.373190 | 4_1:+6089796 | None:intergenic |
| TTCTGAAGACTTGACACTTT+AGG | 0.373672 | 4_1:+6093766 | None:intergenic |
| ATGAAGCAGGCCGTTTATAT+CGG | 0.376195 | 4_1:-6089888 | Msa0532060:CDS |
| GGTAGAAATATGTTAGCTAT+AGG | 0.377788 | 4_1:-6096208 | Msa0532060:five_prime_UTR |
| TCCAGTCTACTAGTGACATT+AGG | 0.379208 | 4_1:+6088451 | None:intergenic |
| TTCTGAAGACTTGACGCTTT+AGG | 0.380718 | 4_1:+6093389 | None:intergenic |
| GGACTCGACCTCAACAAGTT+TGG | 0.381644 | 4_1:+6089009 | None:intergenic |
| ATGTAAATATGGTTTACATT+TGG | 0.381800 | 4_1:-6088576 | Msa0532060:three_prime_UTR |
| TCTTAAACTTCTCTTTGAAA+TGG | 0.394970 | 4_1:+6093795 | None:intergenic |
| TCAACTTCCAATTCAAATGA+TGG | 0.401502 | 4_1:+6095906 | None:intergenic |
| TTCCATCTGCATTCTGTGGA+TGG | 0.403194 | 4_1:+6091730 | None:intergenic |
| AGATGTGATAACAGATATTA+GGG | 0.404825 | 4_1:-6088691 | Msa0532060:CDS |
| TTCTATAGTTCATGGCTTTG+AGG | 0.408658 | 4_1:-6091683 | Msa0532060:CDS |
| TCCTGCTCCTCTACAGAGTC+AGG | 0.409851 | 4_1:+6092799 | None:intergenic |
| GCTCGTTTGAAGCACTGTTA+TGG | 0.410700 | 4_1:+6096110 | None:intergenic |
| CCGTCGCTCCTCTGCCAGTT+GGG | 0.412391 | 4_1:+6088988 | None:intergenic |
| TTTAGAATTGTTAATGCAAA+GGG | 0.415662 | 4_1:-6091790 | Msa0532060:CDS |
| TCCACTTGTTCACATTAAAA+CGG | 0.416746 | 4_1:+6091431 | None:intergenic |
| TTTGTAGAGGAGCAAGAAAT+AGG | 0.423982 | 4_1:-6094388 | Msa0532060:intron |
| ATTTCAAAGAGAAGTTTAAG+AGG | 0.428244 | 4_1:-6093793 | Msa0532060:CDS |
| TATCTGAAGCAAAATACAAT+AGG | 0.430499 | 4_1:+6091635 | None:intergenic |
| TTTGTAGAGGAGCAGGCAAC+AGG | 0.431641 | 4_1:-6093667 | Msa0532060:intron |
| TGGTACCTGAAAATGAATTT+GGG | 0.434994 | 4_1:+6096024 | None:intergenic |
| GATCAGTAATGAAGTCATTA+CGG | 0.436319 | 4_1:+6091479 | None:intergenic |
| AGGTTCCATGGCAAAGAGAA+AGG | 0.437723 | 4_1:-6092977 | Msa0532060:CDS |
| CCAGTCTACTAGTGACATTA+GGG | 0.439775 | 4_1:+6088452 | None:intergenic |
| TCCTGCTCCTCTACAAGCTC+AGG | 0.439898 | 4_1:+6094770 | None:intergenic |
| TTGAATTGGAAGTTGATCTT+GGG | 0.441555 | 4_1:-6095899 | Msa0532060:CDS |
| AGGCTGGTGGCTGTAGGTCC+AGG | 0.443742 | 4_1:-6091502 | Msa0532060:CDS |
| TTATCACATCTTCCGCCTCA+TGG | 0.446333 | 4_1:+6088703 | None:intergenic |
| CCACTTGTTCACATTAAAAC+GGG | 0.448981 | 4_1:+6091432 | None:intergenic |
| TCTTGGGTTTGTAGAGGAGC+AGG | 0.450818 | 4_1:-6095883 | Msa0532060:CDS |
| TCCTGAGCTTGTAGAGGAGC+AGG | 0.454298 | 4_1:-6094771 | Msa0532060:CDS |
| GATGGATTATTAAGAACAAC+CGG | 0.455190 | 4_1:+6095924 | None:intergenic |
| TTGTTAATGCAAAGGGGACC+AGG | 0.457044 | 4_1:-6091783 | Msa0532060:CDS |
| CAAAGAGAAGTTTAAGAGGT+AGG | 0.460609 | 4_1:-6093789 | Msa0532060:CDS |
| CTGCCTTTAAGTCGGTGGTT+GGG | 0.460613 | 4_1:-6089171 | Msa0532060:CDS |
| TTTGTAGAGGAGCAGGGGAC+AGG | 0.460722 | 4_1:-6095876 | Msa0532060:intron |
| CTTGTAGAGGAGCAGGAGAC+AGG | 0.461686 | 4_1:-6094764 | Msa0532060:intron |
| TAACAGCGGGACCCTGTGAC+TGG | 0.462835 | 4_1:-6089470 | Msa0532060:intron |
| AGGAATTTGCTTTAAACTCT+CGG | 0.464987 | 4_1:-6088546 | Msa0532060:three_prime_UTR |
| GGTTTACATTTGGAGTATGT+AGG | 0.465457 | 4_1:-6088566 | Msa0532060:three_prime_UTR |
| ATATAATACATATGCTTTCA+TGG | 0.465908 | 4_1:+6096075 | None:intergenic |
| TCCTGCTCCTCTACAACGTC+AGG | 0.466617 | 4_1:+6092850 | None:intergenic |
| TCCGTCGCTCCTCTGCCAGT+TGG | 0.466866 | 4_1:+6088987 | None:intergenic |
| TCAACTTCTAATTCATTCGA+TGG | 0.467657 | 4_1:+6094065 | None:intergenic |
| TTGGTAGAGCAGCAGGTGAC+AGG | 0.469637 | 4_1:-6095143 | Msa0532060:intron |
| AGGTACCATGGCAAAGAGAA+AGG | 0.469697 | 4_1:-6094168 | Msa0532060:CDS |
| AGGTACCATGGCAAAGAGAA+AGG | 0.469697 | 4_1:-6096009 | Msa0532060:exon |
| AGTGTCAAGTCTTCAGAAGC+AGG | 0.470712 | 4_1:-6093761 | Msa0532060:CDS |
| TGAGGATGAGGTGGAAGTAA+TGG | 0.470828 | 4_1:-6089197 | Msa0532060:CDS |
| TCCTGACTCTGTAGAGGAGC+AGG | 0.473160 | 4_1:-6092800 | Msa0532060:CDS |
| TTGCTTCAGATACAAGAGTC+AGG | 0.473273 | 4_1:-6091624 | Msa0532060:CDS |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.473899 | 4_1:+6092972 | None:intergenic |
| ATTGACCCTCTTGGTCGCCC+TGG | 0.474038 | 4_1:+6091765 | None:intergenic |
| TCTTGAGTTTGTAGAGGAGC+AGG | 0.474752 | 4_1:-6093674 | Msa0532060:CDS |
| ACAGAGAGCAAATGTCAAAT+CGG | 0.476160 | 4_1:-6095210 | Msa0532060:CDS |
| ACACAGTGCAAGTGTCGAAC+CGG | 0.477791 | 4_1:-6095943 | Msa0532060:CDS |
| CAACTTCCAATTCATTTGAT+GGG | 0.479734 | 4_1:+6094419 | None:intergenic |
| TCAGGCTCCTTTCCAGTCAC+AGG | 0.480785 | 4_1:+6089458 | None:intergenic |
| AGCGTCAAGTCTTCTGAAGA+AGG | 0.484194 | 4_1:-6095970 | Msa0532060:CDS |
| TACAAGTGGAAGAGCAGCTA+GGG | 0.485047 | 4_1:+6090097 | None:intergenic |
| GATGGATTATCAAGAACAAC+CGG | 0.485164 | 4_1:+6093338 | None:intergenic |
| AGCGTCAAGTCTTCAGAAGA+AGG | 0.486366 | 4_1:-6094858 | Msa0532060:CDS |
| TCTTGCTTCTCTACAAACTT+GGG | 0.486475 | 4_1:+6094041 | None:intergenic |
| TCTGTAGAGGAGCAGGAGAC+AGG | 0.487186 | 4_1:-6092793 | Msa0532060:intron |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.488381 | 4_1:+6094163 | None:intergenic |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.488381 | 4_1:+6096004 | None:intergenic |
| AACTTTCCATCTGCATTCTG+TGG | 0.489319 | 4_1:+6091726 | None:intergenic |
| TCCTGAGTTGGTAGAGCAGC+AGG | 0.491712 | 4_1:-6095150 | Msa0532060:CDS |
| AGCGTCAAGTCTTCAGAAGC+AGG | 0.491830 | 4_1:-6093384 | Msa0532060:CDS |
| GTCATCAGGGATATGCTTCA+AGG | 0.491897 | 4_1:+6089810 | None:intergenic |
| AGTGTCAAGTCTTCAGAAGA+AGG | 0.492126 | 4_1:-6092938 | Msa0532060:CDS |
| TGGGAAGCAATCATATATGC+AGG | 0.493010 | 4_1:-6089152 | Msa0532060:CDS |
| TGTTGAGGTCGAGTCCCAAC+TGG | 0.495312 | 4_1:-6089002 | Msa0532060:CDS |
| TAAAGAGAAATTTAAGAGAT+CGG | 0.495754 | 4_1:-6094886 | Msa0532060:CDS |
| TCCTGACGTTGTAGAGGAGC+AGG | 0.496741 | 4_1:-6092851 | Msa0532060:CDS |
| CCCTAATGTCACTAGTAGAC+TGG | 0.496886 | 4_1:-6088452 | Msa0532060:three_prime_UTR |
| TAATAATCCATCAAATGAGT+TGG | 0.498386 | 4_1:-6092881 | Msa0532060:CDS |
| AGGCGTAAGAATAAAGTAAG+AGG | 0.500263 | 4_1:-6091604 | Msa0532060:CDS |
| AAAGAGTGCAAATGTCAAAC+CGG | 0.503507 | 4_1:-6093357 | Msa0532060:CDS |
| TATGCAGGAAATCAACAGTC+AGG | 0.507449 | 4_1:-6088921 | Msa0532060:CDS |
| TGTTCGAGTTCAAGAGCTGC+AGG | 0.507588 | 4_1:-6089095 | Msa0532060:CDS |
| TTCAAGATACAGATGTGGTT+CGG | 0.507876 | 4_1:-6089924 | Msa0532060:CDS |
| TATATCGGAGTCGGCGCCAC+AGG | 0.507889 | 4_1:-6089873 | Msa0532060:CDS |
| ATTGCAAAGAGAAAGTTAAG+AGG | 0.508898 | 4_1:-6093416 | Msa0532060:CDS |
| TCTTAACTTTCTCTTTGCCA+TGG | 0.510685 | 4_1:+6095271 | None:intergenic |
| TCTTGCTCCTCTACAAACTC+AGG | 0.513274 | 4_1:+6094394 | None:intergenic |
| AGCGTCTACTCTTCAGAAGA+AGG | 0.514021 | 4_1:-6094482 | Msa0532060:CDS |
| ATGACGTCAATGAGTCTGAT+TGG | 0.514502 | 4_1:-6089792 | Msa0532060:CDS |
| AATCAATATACCTCAAAAGA+AGG | 0.514859 | 4_1:+6089742 | None:intergenic |
| CTCATTAACCCACTCCCCAT+TGG | 0.514976 | 4_1:+6089400 | None:intergenic |
| ACTGCCTTTAAGTCGGTGGT+TGG | 0.517338 | 4_1:-6089172 | Msa0532060:CDS |
| TTTGTAGAGAAGCAAGAGAC+AGG | 0.517788 | 4_1:-6094035 | Msa0532060:intron |
| CAATGGGGAGTGGGTTAATG+AGG | 0.519160 | 4_1:-6089399 | Msa0532060:CDS |
| GGTTCCATGGCAAAGAGAAA+GGG | 0.524638 | 4_1:-6092976 | Msa0532060:CDS |
| GGGTGGAGGCAGAGAATGCT+AGG | 0.531465 | 4_1:-6089054 | Msa0532060:CDS |
| CAAAGAGAAATTTGAGAGAT+CGG | 0.538439 | 4_1:-6094510 | Msa0532060:CDS |
| GGCTGAATTAGATGCCCAAA+GGG | 0.538742 | 4_1:-6089074 | Msa0532060:CDS |
| CCTACGAGGCTGGTGGCTGT+AGG | 0.539947 | 4_1:-6091508 | Msa0532060:CDS |
| AAGTACTAAAGATACTATAG+TGG | 0.543254 | 4_1:-6091395 | Msa0532060:CDS |
| AATATTGAGACAATGCTGAC+TGG | 0.546405 | 4_1:+6088885 | None:intergenic |
| GCTAGAGAATTCTGAGGATG+AGG | 0.546881 | 4_1:-6089209 | Msa0532060:CDS |
| GCAGAAAATGGCTCAAGTAA+CGG | 0.547182 | 4_1:+6096260 | None:intergenic |
| GGGGACCAGGGCGACCAAGA+GGG | 0.547401 | 4_1:-6091770 | Msa0532060:CDS |
| TTACTTAAAATTTGAAACAA+AGG | 0.548318 | 4_1:-6089839 | Msa0532060:CDS |
| TCTTAACTTTCTCTTTGCAA+TGG | 0.548391 | 4_1:+6093418 | None:intergenic |
| ATCAAAGCTAGCTGCTTGAA+AGG | 0.550346 | 4_1:+6089582 | None:intergenic |
| GAGTTTGTAGAGGAGGAGAC+AGG | 0.551866 | 4_1:-6093293 | Msa0532060:intron |
| AACCATCCACAGAATGCAGA+TGG | 0.554928 | 4_1:-6091732 | Msa0532060:CDS |
| AGCGTCAAGTCTTCAGCAGA+TGG | 0.555256 | 4_1:-6095237 | Msa0532060:CDS |
| TGATCCCGAGTTTGTAGAGG+AGG | 0.555539 | 4_1:-6093300 | Msa0532060:CDS |
| ACTGAGTCGAGATGGAAAGT+TGG | 0.556259 | 4_1:-6091545 | Msa0532060:CDS |
| ACAGAGCGCAAATGTCAAAA+CGG | 0.556630 | 4_1:-6093734 | Msa0532060:CDS |
| GTCTCCTCCTCTACAAACTC+GGG | 0.557059 | 4_1:+6093296 | None:intergenic |
| TGTCTCCTCCTCTACAAACT+CGG | 0.559934 | 4_1:+6093295 | None:intergenic |
| GGTACCATGGCAAAGAGAAA+GGG | 0.560767 | 4_1:-6094167 | Msa0532060:CDS |
| GGTACCATGGCAAAGAGAAA+GGG | 0.560767 | 4_1:-6096008 | Msa0532060:exon |
| CCCAACTGGCAGAGGAGCGA+CGG | 0.564166 | 4_1:-6088988 | Msa0532060:CDS |
| CAGAACAAATGGAGCTTCTG+CGG | 0.564418 | 4_1:+6090064 | None:intergenic |
| GTACAAGTGGAAGAGCAGCT+AGG | 0.564812 | 4_1:+6090096 | None:intergenic |
| AGGGGACCAGGGCGACCAAG+AGG | 0.568832 | 4_1:-6091771 | Msa0532060:CDS |
| CAAAGAGAAAGTTAAGAGGT+AGG | 0.570257 | 4_1:-6093412 | Msa0532060:CDS |
| AAGGCGATTATCGATGAAGC+AGG | 0.570651 | 4_1:-6089901 | Msa0532060:CDS |
| AGTTGATCTTGGGTTTGTAG+AGG | 0.572021 | 4_1:-6095889 | Msa0532060:CDS |
| ATTAAGAGCCAAACTTGTTG+AGG | 0.572539 | 4_1:-6089017 | Msa0532060:CDS |
| CTTGGGTTTGTAGAGGAGCA+GGG | 0.572912 | 4_1:-6095882 | Msa0532060:CDS |
| GGTCGAGTCCCAACTGGCAG+AGG | 0.576269 | 4_1:-6088996 | Msa0532060:CDS |
| TCTTAAATTTCTCTTTAACA+TGG | 0.580244 | 4_1:+6094892 | None:intergenic |
| AAGCGTAAACTGAGTCGAGA+TGG | 0.581874 | 4_1:-6091553 | Msa0532060:CDS |
| ACAAAATCAACTGCACAAGC+AGG | 0.583911 | 4_1:+6088428 | None:intergenic |
| TGATATTCATCCTACGAGGC+TGG | 0.584829 | 4_1:-6091518 | Msa0532060:CDS |
| ACCTGCTGCTCTACCAACTC+AGG | 0.584977 | 4_1:+6095149 | None:intergenic |
| ACGGAAACGAGAGGAGAGTG+AGG | 0.586157 | 4_1:-6088969 | Msa0532060:CDS |
| ATTAGATGCCCAAAGGGTGG+AGG | 0.590973 | 4_1:-6089068 | Msa0532060:CDS |
| CAAAGAGAAAGTTAAGAGAT+CGG | 0.594814 | 4_1:-6095265 | Msa0532060:CDS |
| AGATACAGATGTGGTTCGGA+AGG | 0.597957 | 4_1:-6089920 | Msa0532060:CDS |
| GTGTCAAGTCTTCAGAAGCA+GGG | 0.598010 | 4_1:-6093760 | Msa0532060:CDS |
| GTAATGAAGTCATTACGGCC+TGG | 0.598380 | 4_1:+6091484 | None:intergenic |
| AGAGAATTCTGAGGATGAGG+TGG | 0.599063 | 4_1:-6089206 | Msa0532060:CDS |
| AGTTGATCTTGAGTTTGTAG+AGG | 0.600145 | 4_1:-6093680 | Msa0532060:CDS |
| AACTCTCGGAAGCATTCGCT+AGG | 0.600450 | 4_1:-6088532 | Msa0532060:three_prime_UTR |
| CAGCGGATACATCATACTAG+TGG | 0.602911 | 4_1:-6089613 | Msa0532060:CDS |
| AGTTGCTCCTGACGTTGTAG+AGG | 0.602942 | 4_1:-6092857 | Msa0532060:CDS |
| GGAAACTGCCTTTAAGTCGG+TGG | 0.602974 | 4_1:-6089176 | Msa0532060:CDS |
| AGTTGATCCCGAGTTTGTAG+AGG | 0.604279 | 4_1:-6093303 | Msa0532060:CDS |
| GCGGGACCCTGTGACTGGAA+AGG | 0.604650 | 4_1:-6089465 | Msa0532060:CDS |
| GGCGCCGACTCCGATATAAA+CGG | 0.605809 | 4_1:+6089878 | None:intergenic |
| CCTACAGCCACCAGCCTCGT+AGG | 0.606776 | 4_1:+6091508 | None:intergenic |
| CAGACTCATTGACGTCATCA+GGG | 0.607592 | 4_1:+6089797 | None:intergenic |
| AGAGGAGCGACGGAAACGAG+AGG | 0.611564 | 4_1:-6088978 | Msa0532060:CDS |
| AGATGATCCTGACTCTGTAG+AGG | 0.612790 | 4_1:-6092806 | Msa0532060:CDS |
| TTGAGACAATGCTGACTGGA+TGG | 0.620427 | 4_1:+6088889 | None:intergenic |
| TTGGGTTTGTAGAGGAGCAG+GGG | 0.620467 | 4_1:-6095881 | Msa0532060:CDS |
| GCGGAGACACAAAGTACAAG+TGG | 0.621120 | 4_1:+6090083 | None:intergenic |
| AAAGTAAGAGGACAAACAAG+AGG | 0.624934 | 4_1:-6091592 | Msa0532060:CDS |
| AGTTGATCCTGAGTTTGTAG+AGG | 0.626630 | 4_1:-6094401 | Msa0532060:CDS |
| AGCGGATACATCATACTAGT+GGG | 0.626746 | 4_1:-6089612 | Msa0532060:CDS |
| AATGGAAACTGCCTTTAAGT+CGG | 0.629497 | 4_1:-6089179 | Msa0532060:CDS |
| CAGGCTCCTTTCCAGTCACA+GGG | 0.631724 | 4_1:+6089459 | None:intergenic |
| ATTTGAAGTTGATCCTGAGT+TGG | 0.632233 | 4_1:-6095162 | Msa0532060:CDS |
| AGTTGATCCTGAGCTTGTAG+AGG | 0.632359 | 4_1:-6094777 | Msa0532060:CDS |
| GGGAAGCAATCATATATGCA+GGG | 0.632925 | 4_1:-6089151 | Msa0532060:CDS |
| AGGCTGAATTAGATGCCCAA+AGG | 0.633913 | 4_1:-6089075 | Msa0532060:CDS |
| GCTTTCATGGAGGAACACAT+AGG | 0.636769 | 4_1:+6096088 | None:intergenic |
| ATGGCAAAGAGAAAGGGAAG+AGG | 0.637485 | 4_1:-6096002 | Msa0532060:CDS |
| CAGGCCGTTTATATCGGAGT+CGG | 0.645550 | 4_1:-6089882 | Msa0532060:CDS |
| TATTCATCCTACGAGGCTGG+TGG | 0.646755 | 4_1:-6091515 | Msa0532060:CDS |
| AAGTAAGAGGACAAACAAGA+GGG | 0.650275 | 4_1:-6091591 | Msa0532060:CDS |
| ATGGCAAAGAGAAAGGGAAG+AGG | 0.656936 | 4_1:-6094161 | Msa0532060:CDS |
| TGTTAATGCAAAGGGGACCA+GGG | 0.658923 | 4_1:-6091782 | Msa0532060:CDS |
| TGAATTAGATGCCCAAAGGG+TGG | 0.663302 | 4_1:-6089071 | Msa0532060:CDS |
| CGCTTGTATTAGGAAAGTGA+AGG | 0.667054 | 4_1:-6088651 | Msa0532060:exon |
| CAAAGAGAAAGGGAAGATGT+CGG | 0.667696 | 4_1:-6092966 | Msa0532060:CDS |
| TGAAGCACAACTCCATGAGG+CGG | 0.667829 | 4_1:-6088715 | Msa0532060:CDS |
| GAGACTTCAAGATACAGATG+TGG | 0.668184 | 4_1:-6089929 | Msa0532060:CDS |
| TTAGAATTGTTAATGCAAAG+GGG | 0.668721 | 4_1:-6091789 | Msa0532060:CDS |
| AGAAAATGGCTCAAGTAACG+GGG | 0.677391 | 4_1:+6096262 | None:intergenic |
| CAAAGAGAAAGGGAAGAGGT+CGG | 0.681304 | 4_1:-6094157 | Msa0532060:CDS |
| AGTAATGCTCATGAAGCCTG+TGG | 0.683773 | 4_1:+6089857 | None:intergenic |
| GCTTGAAGCACAACTCCATG+AGG | 0.683823 | 4_1:-6088718 | Msa0532060:CDS |
| GAGTCTGCTAGAGAATTCTG+AGG | 0.685882 | 4_1:-6089215 | Msa0532060:CDS |
| TAATACATATGCTTTCATGG+AGG | 0.738702 | 4_1:+6096078 | None:intergenic |
| ATGTTGATATTCATCCTACG+AGG | 0.745737 | 4_1:-6091522 | Msa0532060:CDS |
| AGGCAAGTAAGGCAAAACAG+CGG | 0.773909 | 4_1:-6089630 | Msa0532060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATGAAAAAGTTTTTAA+GGG | + | chr4_1:6088488-6088507 | None:intergenic | 10.0% |
| !!! | TTTATATGAAAAAGTTTTTA+AGG | + | chr4_1:6088489-6088508 | None:intergenic | 10.0% |
| !!! | TTTTCATATAAAAATGTTAT+TGG | - | chr4_1:6088497-6088516 | Msa0532060:three_prime_UTR | 10.0% |
| !! | TTAAATTGAAATAATTTCTA+TGG | - | chr4_1:6088523-6088542 | Msa0532060:three_prime_UTR | 10.0% |
| !! | TTCAAAAAAAAAACAAAAAT+AGG | + | chr4_1:6088913-6088932 | None:intergenic | 10.0% |
| !!! | TTGAATTGAAATAATTTTTA+GGG | - | chr4_1:6090732-6090751 | Msa0532060:intron | 10.0% |
| !!! | TTGAATTGAAATAATTTTTA+GGG | - | chr4_1:6090732-6090751 | Msa0532060:intron | 10.0% |
| !!! | AAAAAATCATTAGATTTTAT+AGG | - | chr4_1:6092360-6092379 | Msa0532060:intron | 10.0% |
| !!! | AAAAATCATTAGATTTTATA+GGG | - | chr4_1:6092361-6092380 | Msa0532060:intron | 10.0% |
| !! | TATAGATTATAAATAATAGA+TGG | - | chr4_1:6092603-6092622 | Msa0532060:intron | 10.0% |
| !!! | GTTCTTTTTTTTTTTTTTTT+TGG | - | chr4_1:6094219-6094238 | Msa0532060:intron | 10.0% |
| !!! | TCTTTTTTTTTTTTTTTTTG+GGG | - | chr4_1:6094221-6094240 | Msa0532060:intron | 10.0% |
| !! | TAATAAGAGAATATGATAAA+GGG | + | chr4_1:6089551-6089570 | None:intergenic | 15.0% |
| !! | TTAATAAGAGAATATGATAA+AGG | + | chr4_1:6089552-6089571 | None:intergenic | 15.0% |
| !! | TGATAATATATCAAATGAAT+TGG | - | chr4_1:6089855-6089874 | Msa0532060:CDS | 15.0% |
| !! | TAACAAGATAATATGATAAA+GGG | + | chr4_1:6089930-6089949 | None:intergenic | 15.0% |
| !! | TTAACAAGATAATATGATAA+AGG | + | chr4_1:6089931-6089950 | None:intergenic | 15.0% |
| !!! | GTTGAATTGAAATAATTTTT+AGG | - | chr4_1:6090731-6090750 | Msa0532060:intron | 15.0% |
| !!! | TTGAATTGAAATAATTTTCA+GGG | - | chr4_1:6091109-6091128 | Msa0532060:intron | 15.0% |
| !!! | GTTGAATTGAAATAATTTTT+AGG | - | chr4_1:6090731-6090750 | Msa0532060:intron | 15.0% |
| !!! | ATTTTGTTTGATATTAATTG+AGG | - | chr4_1:6092517-6092536 | Msa0532060:intron | 15.0% |
| !! | AAAAAAAACACATGATTTAT+CGG | + | chr4_1:6093608-6093627 | None:intergenic | 15.0% |
| !!! | TAAATCATGTGTTTTTTTTA+TGG | - | chr4_1:6093609-6093628 | Msa0532060:intron | 15.0% |
| !!! | TTTTTTATGGAAAAATTTAG+TGG | - | chr4_1:6093622-6093641 | Msa0532060:intron | 15.0% |
| !!! | ATAATTTTCATAATATGAGA+GGG | + | chr4_1:6093667-6093686 | None:intergenic | 15.0% |
| !!! | AATAATTTTCATAATATGAG+AGG | + | chr4_1:6093668-6093687 | None:intergenic | 15.0% |
| !!! | TATTATAATTTTATGTCGAT+TGG | - | chr4_1:6093684-6093703 | Msa0532060:CDS | 15.0% |
| !! | ATATTTATAATCTAATAACG+TGG | + | chr4_1:6093724-6093743 | None:intergenic | 15.0% |
| !!! | ATTTTAATATGAACAAATGA+TGG | + | chr4_1:6093986-6094005 | None:intergenic | 15.0% |
| !! | TTCATATTAAAATTTGACTA+AGG | - | chr4_1:6093993-6094012 | Msa0532060:intron | 15.0% |
| !!! | TTACTTAAAATTTGAAACAA+AGG | - | chr4_1:6094817-6094836 | Msa0532060:CDS | 15.0% |
| !! | GGAATTTATTAAAATTTACA+GGG | + | chr4_1:6094958-6094977 | None:intergenic | 15.0% |
| !! | TGGAATTTATTAAAATTTAC+AGG | + | chr4_1:6094959-6094978 | None:intergenic | 15.0% |
| !! | ATTGTAATTGTATTCATTAT+AGG | - | chr4_1:6095393-6095412 | Msa0532060:intron | 15.0% |
| !!! | TTTGATTTATCATGTAAATA+TGG | - | chr4_1:6096069-6096088 | Msa0532060:five_prime_UTR | 15.0% |
| !! | TCATAAAAAGCAGAAAATAA+TGG | - | chr4_1:6088427-6088446 | Msa0532060:three_prime_UTR | 20.0% |
| !! | ATATAATACATATGCTTTCA+TGG | + | chr4_1:6088584-6088603 | None:intergenic | 20.0% |
| !! | TAATAATCCATCATTTGAAT+TGG | - | chr4_1:6088743-6088762 | Msa0532060:CDS | 20.0% |
| !! | AAACAAGAGAATAAGATAAA+GGG | + | chr4_1:6088887-6088906 | None:intergenic | 20.0% |
| !! | TAAACAAGAGAATAAGATAA+AGG | + | chr4_1:6088888-6088907 | None:intergenic | 20.0% |
| !!! | ATTCGGTGAAATTTTTAAAT+TGG | - | chr4_1:6089109-6089128 | Msa0532060:CDS | 20.0% |
| !!! | TGAAAAGGAAAATTTTCTTT+AGG | + | chr4_1:6089256-6089275 | None:intergenic | 20.0% |
| !!! | TAAAGAAAATTTTCCTTTTC+AGG | - | chr4_1:6089255-6089274 | Msa0532060:intron | 20.0% |
| !!! | AAAGAAAATTTTCCTTTTCA+GGG | - | chr4_1:6089256-6089275 | Msa0532060:intron | 20.0% |
| !!! | GTTGAATTGAAATAATTTGT+AGG | - | chr4_1:6089634-6089653 | Msa0532060:CDS | 20.0% |
| !! | TCTTAAATTTCTCTTTAACA+TGG | + | chr4_1:6089767-6089786 | None:intergenic | 20.0% |
| !! | TAAAGAGAAATTTAAGAGAT+CGG | - | chr4_1:6089770-6089789 | Msa0532060:CDS | 20.0% |
| !!! | ATTGAATACAATACAGATTT+TGG | - | chr4_1:6089970-6089989 | Msa0532060:intron | 20.0% |
| !! | TAAGAGAATATGATTGATAA+AGG | + | chr4_1:6090307-6090326 | None:intergenic | 20.0% |
| !! | AATTATTTCAACTCAAAATC+TGG | + | chr4_1:6090365-6090384 | None:intergenic | 20.0% |
| !!! | TTTGAGTTGAAATAATTTTC+AGG | - | chr4_1:6090368-6090387 | Msa0532060:intron | 20.0% |
| !!! | TTGAGTTGAAATAATTTTCA+GGG | - | chr4_1:6090369-6090388 | Msa0532060:intron | 20.0% |
| !!! | TTTTCTGAAATTCATTTTTC+AGG | - | chr4_1:6090468-6090487 | Msa0532060:intron | 20.0% |
| !! | TAACAAGACAATATGATAAA+GGG | + | chr4_1:6090659-6090678 | None:intergenic | 20.0% |
| !! | TTAACAAGACAATATGATAA+AGG | + | chr4_1:6090660-6090679 | None:intergenic | 20.0% |
| !!! | GTTTTTTGAAATTCATTTTC+AGG | - | chr4_1:6090836-6090855 | Msa0532060:intron | 20.0% |
| !!! | GTTGAATTGAAATAATTTTC+AGG | - | chr4_1:6091108-6091127 | Msa0532060:intron | 20.0% |
| !!! | GTTTTTTGAAATTCATTTTC+AGG | - | chr4_1:6090836-6090855 | Msa0532060:intron | 20.0% |
| !! | TTAACAAGAGAATATGAAAA+CGG | + | chr4_1:6091474-6091493 | None:intergenic | 20.0% |
| !!! | GTTTTCCAAAATTCATTTTT+AGG | - | chr4_1:6091659-6091678 | Msa0532060:CDS | 20.0% |
| !! | TCATTCTATAAACAAATATG+TGG | + | chr4_1:6092205-6092224 | None:intergenic | 20.0% |
| !!! | ATCTAATGATTTTTTTTTGC+CGG | + | chr4_1:6092355-6092374 | None:intergenic | 20.0% |
| !! | TCGAGTAATTAATTTATAGT+TGG | - | chr4_1:6092745-6092764 | Msa0532060:intron | 20.0% |
| !!! | TTAACTATCGTTTTTAAGAA+TGG | + | chr4_1:6092799-6092818 | None:intergenic | 20.0% |
| !!! | TTTTAGAATTGTTAATGCAA+AGG | - | chr4_1:6092865-6092884 | Msa0532060:CDS | 20.0% |
| !!! | TTTAGAATTGTTAATGCAAA+GGG | - | chr4_1:6092866-6092885 | Msa0532060:CDS | 20.0% |
| !! | ACATGATATTCCAAAAAATT+GGG | + | chr4_1:6094201-6094220 | None:intergenic | 20.0% |
| !! | AACATGATATTCCAAAAAAT+TGG | + | chr4_1:6094202-6094221 | None:intergenic | 20.0% |
| !! | AAATTTCGAAGAAAACAAAT+TGG | + | chr4_1:6094645-6094664 | None:intergenic | 20.0% |
| !! | TTTATTAAAATTTACAGGGT+AGG | + | chr4_1:6094954-6094973 | None:intergenic | 20.0% |
| !! | TATTGACAAAAAACATGTTA+TGG | + | chr4_1:6094979-6094998 | None:intergenic | 20.0% |
| !! | TTGTCAATATTATTCAGATA+AGG | - | chr4_1:6094990-6095009 | Msa0532060:intron | 20.0% |
| !! | ATAAACATATTTACGATCAT+TGG | - | chr4_1:6095815-6095834 | Msa0532060:intron | 20.0% |
| !! | TAAACATATTTACGATCATT+GGG | - | chr4_1:6095816-6095835 | Msa0532060:intron | 20.0% |
| !! | TTTCTATCACAAAAAAACAT+AGG | + | chr4_1:6095874-6095893 | None:intergenic | 20.0% |
| !!! | TTTTTACTATGATTGTAAGA+AGG | + | chr4_1:6096043-6096062 | None:intergenic | 20.0% |
| !! | ATGTAAATATGGTTTACATT+TGG | - | chr4_1:6096080-6096099 | Msa0532060:five_prime_UTR | 20.0% |
| !! | TCATTACAAATATTGCTAAA+TGG | + | chr4_1:6096295-6096314 | None:intergenic | 20.0% |
| ! | ATGAAAATGAAAGCAGAAAA+TGG | + | chr4_1:6088411-6088430 | None:intergenic | 25.0% |
| ! | ACAATTCGTTTACCAAAATT+TGG | + | chr4_1:6088979-6088998 | None:intergenic | 25.0% |
| !!! | ATGCTGAATTGATAATTTTC+AGG | - | chr4_1:6089005-6089024 | Msa0532060:CDS | 25.0% |
| !!! | TGCTGAATTGATAATTTTCA+GGG | - | chr4_1:6089006-6089025 | Msa0532060:CDS | 25.0% |
| !!! | ATTGGTTATACCGATTTAAA+AGG | - | chr4_1:6089127-6089146 | Msa0532060:CDS | 25.0% |
| !!! | GTTTTCTGAAATTCATTTTC+AGG | - | chr4_1:6089360-6089379 | Msa0532060:intron | 25.0% |
| ! | ATTGTATTCAATTCACAGTA+AGG | + | chr4_1:6089583-6089602 | None:intergenic | 25.0% |
| ! | AATTGAATACAATCCAGATT+TGG | - | chr4_1:6089590-6089609 | Msa0532060:CDS | 25.0% |
| ! | ATTGAATACAATCCAGATTT+GGG | - | chr4_1:6089591-6089610 | Msa0532060:CDS | 25.0% |
| !!! | ACAATACAGATTTTGGTAAA+CGG | - | chr4_1:6089977-6089996 | Msa0532060:intron | 25.0% |
| !! | TTGAATTGGAATAGTTTTCA+GGG | - | chr4_1:6090014-6090033 | Msa0532060:intron | 25.0% |
| !!! | GTTTTCTGAAATTCATTTTC+AGG | - | chr4_1:6089360-6089379 | Msa0532060:intron | 25.0% |
| ! | ACTCTATTCAATTCACAATA+AGG | + | chr4_1:6090691-6090710 | None:intergenic | 25.0% |
| !! | TCTTAAACTTCTCTTTGAAA+TGG | + | chr4_1:6090864-6090883 | None:intergenic | 25.0% |
| ! | ATTTCAAAGAGAAGTTTAAG+AGG | - | chr4_1:6090863-6090882 | Msa0532060:intron | 25.0% |
| ! | TCAACTTCAAATTCATTTGA+TGG | + | chr4_1:6089486-6089505 | None:intergenic | 25.0% |
| ! | TGATAATCCATCAAATGATT+TGG | - | chr4_1:6091329-6091348 | Msa0532060:intron | 25.0% |
| ! | TAACAAGAGAATATGAAAAC+GGG | + | chr4_1:6091473-6091492 | None:intergenic | 25.0% |
| ! | TGTTAACTTCTATTCCTTAT+TGG | - | chr4_1:6091488-6091507 | Msa0532060:CDS | 25.0% |
| ! | GTTAACTTCTATTCCTTATT+GGG | - | chr4_1:6091489-6091508 | Msa0532060:CDS | 25.0% |
| !! | TGGAACCTAAAAATGAATTT+TGG | + | chr4_1:6091667-6091686 | None:intergenic | 25.0% |
| !!! | AAATTCATTTTTAGGTTCCA+TGG | - | chr4_1:6091667-6091686 | Msa0532060:CDS | 25.0% |
| ! | TAATAATCCATCAAATGAGT+TGG | - | chr4_1:6091775-6091794 | Msa0532060:CDS | 25.0% |
| ! | CAACATGTAAAACTATAACA+TGG | + | chr4_1:6091949-6091968 | None:intergenic | 25.0% |
| ! | AGAACTGTATGTTAATGTTA+TGG | + | chr4_1:6092148-6092167 | None:intergenic | 25.0% |
| !! | CATTAGATTTTATAGGGAAA+AGG | - | chr4_1:6092367-6092386 | Msa0532060:intron | 25.0% |
| !!! | AAAGCAAGTTTTGATATATG+AGG | + | chr4_1:6092415-6092434 | None:intergenic | 25.0% |
| ! | ATAATCCTCAAAAATAAGTG+AGG | + | chr4_1:6092441-6092460 | None:intergenic | 25.0% |
| !!! | CACTTATTTTTGAGGATTAT+TGG | - | chr4_1:6092441-6092460 | Msa0532060:intron | 25.0% |
| ! | TACTAAGTATAGTATGTACT+AGG | + | chr4_1:6092719-6092738 | None:intergenic | 25.0% |
| !!! | CGTTTTTAAGAATGGAATAA+AGG | + | chr4_1:6092791-6092810 | None:intergenic | 25.0% |
| !! | TGCAGATGTCTTATTATTAA+TGG | - | chr4_1:6092832-6092851 | Msa0532060:CDS | 25.0% |
| ! | TTAGAATTGTTAATGCAAAG+GGG | - | chr4_1:6092867-6092886 | Msa0532060:CDS | 25.0% |
| !! | GTTGAATGTTTTCATTTCAA+TGG | - | chr4_1:6092950-6092969 | Msa0532060:CDS | 25.0% |
| !! | TATCTGAAGCAAAATACAAT+AGG | + | chr4_1:6093024-6093043 | None:intergenic | 25.0% |
| ! | AAGTACTAAAGATACTATAG+TGG | - | chr4_1:6093261-6093280 | Msa0532060:intron | 25.0% |
| !! | AAAAAGTTCTGGTATGTTAT+TGG | - | chr4_1:6093284-6093303 | Msa0532060:intron | 25.0% |
| ! | GTATTAATGTTATACAACGT+GGG | + | chr4_1:6093753-6093772 | None:intergenic | 25.0% |
| !! | ATATGTTTTCTAATGCCATA+GGG | + | chr4_1:6094124-6094143 | None:intergenic | 25.0% |
| !! | AATATGTTTTCTAATGCCAT+AGG | + | chr4_1:6094125-6094144 | None:intergenic | 25.0% |
| ! | TATGGCATTAGAAAACATAT+TGG | - | chr4_1:6094124-6094143 | Msa0532060:CDS | 25.0% |
| !! | GAAATTTTTGCCCAATTTTT+TGG | - | chr4_1:6094188-6094207 | Msa0532060:intron | 25.0% |
| !!! | ATTGGTGTGTGTTTTAATTA+CGG | - | chr4_1:6094467-6094486 | Msa0532060:CDS | 25.0% |
| !!! | AGACTGTACTTTTTTATAGA+TGG | + | chr4_1:6094499-6094518 | None:intergenic | 25.0% |
| !! | GTTTTCTTCGAAATTTATTG+AGG | - | chr4_1:6094649-6094668 | Msa0532060:intron | 25.0% |
| !! | TATTCTTTTCACAGAACAAT+TGG | - | chr4_1:6094705-6094724 | Msa0532060:intron | 25.0% |
| ! | AATCAATATACCTCAAAAGA+AGG | + | chr4_1:6094917-6094936 | None:intergenic | 25.0% |
| !! | TTGTTATTAACAGTCTAACT+AGG | - | chr4_1:6095154-6095173 | Msa0532060:CDS | 25.0% |
| ! | ATTGTATTCATTATAGGACA+AGG | - | chr4_1:6095399-6095418 | Msa0532060:intron | 25.0% |
| ! | AAGATGTGATAACAGATATT+AGG | - | chr4_1:6095964-6095983 | Msa0532060:CDS | 25.0% |
| ! | AGATGTGATAACAGATATTA+GGG | - | chr4_1:6095965-6095984 | Msa0532060:CDS | 25.0% |
| !! | ATTTTGTGCTGTATAGAAAA+TGG | - | chr4_1:6096244-6096263 | Msa0532060:five_prime_UTR | 25.0% |
| !! | GTCCAGATTTTAGTAAACTA+AGG | - | chr4_1:6088371-6088390 | Msa0532060:three_prime_UTR | 30.0% |
| GGTAGAAATATGTTAGCTAT+AGG | - | chr4_1:6088448-6088467 | Msa0532060:three_prime_UTR | 30.0% | |
| TAATACATATGCTTTCATGG+AGG | + | chr4_1:6088581-6088600 | None:intergenic | 30.0% | |
| ! | GTTTTCCCAAATTCATTTTC+AGG | - | chr4_1:6088627-6088646 | Msa0532060:three_prime_UTR | 30.0% |
| TGGTACCTGAAAATGAATTT+GGG | + | chr4_1:6088635-6088654 | None:intergenic | 30.0% | |
| ATGGTACCTGAAAATGAATT+TGG | + | chr4_1:6088636-6088655 | None:intergenic | 30.0% | |
| !!! | AAATTCATTTTCAGGTACCA+TGG | - | chr4_1:6088635-6088654 | Msa0532060:three_prime_UTR | 30.0% |
| !! | GATGGATTATTAAGAACAAC+CGG | + | chr4_1:6088735-6088754 | None:intergenic | 30.0% |
| TCAACTTCCAATTCAAATGA+TGG | + | chr4_1:6088753-6088772 | None:intergenic | 30.0% | |
| ! | TTTGAATTGGAAGTTGATCT+TGG | - | chr4_1:6088756-6088775 | Msa0532060:CDS | 30.0% |
| ! | TTGAATTGGAAGTTGATCTT+GGG | - | chr4_1:6088757-6088776 | Msa0532060:CDS | 30.0% |
| ! | TTTGAACACAGTCCAAATTT+TGG | - | chr4_1:6088964-6088983 | Msa0532060:CDS | 30.0% |
| !! | GCTGAATTGATAATTTTCAG+GGG | - | chr4_1:6089007-6089026 | Msa0532060:CDS | 30.0% |
| !! | TGGGGTATTAAGGTAATTTT+GGG | + | chr4_1:6089072-6089091 | None:intergenic | 30.0% |
| !! | TTGGGGTATTAAGGTAATTT+TGG | + | chr4_1:6089073-6089092 | None:intergenic | 30.0% |
| AATTACCTTAATACCCCAAA+AGG | - | chr4_1:6089074-6089093 | Msa0532060:CDS | 30.0% | |
| ! | AGCTTAAGCACCTTTTAAAT+CGG | + | chr4_1:6089140-6089159 | None:intergenic | 30.0% |
| !!! | AAATTCATTTTCAGGTACCA+TGG | - | chr4_1:6088635-6088654 | Msa0532060:three_prime_UTR | 30.0% |
| CAAAGAGAAAGTTAAGAGAT+CGG | - | chr4_1:6089391-6089410 | Msa0532060:CDS | 30.0% | |
| TTCAATTCACAGTAAGGAAT+AGG | + | chr4_1:6089577-6089596 | None:intergenic | 30.0% | |
| TCCCTAATAACACTTCAAAT+GGG | - | chr4_1:6089657-6089676 | Msa0532060:intron | 30.0% | |
| !! | GTCATCTGAAATTCATTTTC+AGG | - | chr4_1:6089739-6089758 | Msa0532060:intron | 30.0% |
| TGTTAATTCCTATTCCTTAC+TGG | - | chr4_1:6089945-6089964 | Msa0532060:intron | 30.0% | |
| GTTAATTCCTATTCCTTACT+GGG | - | chr4_1:6089946-6089965 | Msa0532060:intron | 30.0% | |
| ATTGTATTCAATTCCCAGTA+AGG | + | chr4_1:6089962-6089981 | None:intergenic | 30.0% | |
| !! | CAATACAGATTTTGGTAAAC+GGG | - | chr4_1:6089978-6089997 | Msa0532060:intron | 30.0% |
| !! | GTTATTTCTGGATGTTGAAT+TGG | - | chr4_1:6090000-6090019 | Msa0532060:intron | 30.0% |
| ! | GTTGAATTGGAATAGTTTTC+AGG | - | chr4_1:6090013-6090032 | Msa0532060:intron | 30.0% |
| ! | TGAATTGGAATAGTTTTCAG+GGG | - | chr4_1:6090015-6090034 | Msa0532060:intron | 30.0% |
| CAAAGAGAAATTTGAGAGAT+CGG | - | chr4_1:6090146-6090165 | Msa0532060:intron | 30.0% | |
| TGATAACCCATCAAATGAAT+TGG | - | chr4_1:6090231-6090250 | Msa0532060:intron | 30.0% | |
| CAACTTCCAATTCATTTGAT+GGG | + | chr4_1:6089864-6089883 | None:intergenic | 30.0% | |
| TCAACTTCCAATTCATTTGA+TGG | + | chr4_1:6089865-6089884 | None:intergenic | 30.0% | |
| TATTAACTCCTATTCCTTAC+TGG | - | chr4_1:6089566-6089585 | Msa0532060:intron | 30.0% | |
| ATTAACTCCTATTCCTTACT+GGG | - | chr4_1:6089567-6089586 | Msa0532060:intron | 30.0% | |
| ATTGTATTCAATTCCCAGTA+AGG | + | chr4_1:6089962-6089981 | None:intergenic | 30.0% | |
| GCCATAATAACACTTCAAAT+GGG | - | chr4_1:6090391-6090410 | Msa0532060:intron | 30.0% | |
| !!! | AATTCATTTTTCAGGTACCA+TGG | - | chr4_1:6090476-6090495 | Msa0532060:intron | 30.0% |
| TCAACTTCTAATTCATTCGA+TGG | + | chr4_1:6090594-6090613 | None:intergenic | 30.0% | |
| ! | ATTGAATAGAGTCCTGATTT+TGG | - | chr4_1:6090699-6090718 | Msa0532060:intron | 30.0% |
| !! | GCCATTTTGATGATCTATTA+GGG | + | chr4_1:6090758-6090777 | None:intergenic | 30.0% |
| !! | GTTTTCATAAAGAAGCATGT+AGG | + | chr4_1:6090780-6090799 | None:intergenic | 30.0% |
| ! | TAACAGGAGAGTATGATAAA+GGG | + | chr4_1:6091027-6091046 | None:intergenic | 30.0% |
| ! | TTAACAGGAGAGTATGATAA+AGG | + | chr4_1:6091028-6091047 | None:intergenic | 30.0% |
| TCATACATAAGCTTTCATAG+AGG | + | chr4_1:6091167-6091186 | None:intergenic | 30.0% | |
| TCTTAACTTTCTCTTTGCAA+TGG | + | chr4_1:6091241-6091260 | None:intergenic | 30.0% | |
| ATTGCAAAGAGAAAGTTAAG+AGG | - | chr4_1:6091240-6091259 | Msa0532060:intron | 30.0% | |
| TCAACTTCCAAATCATTTGA+TGG | + | chr4_1:6091339-6091358 | None:intergenic | 30.0% | |
| ACTGTATTCAATTCCCAATA+AGG | + | chr4_1:6091505-6091524 | None:intergenic | 30.0% | |
| ! | ATTGAATACAGTCCAGATTT+TGG | - | chr4_1:6091513-6091532 | Msa0532060:CDS | 30.0% |
| ACAATCTGTTTACCAAAATC+TGG | + | chr4_1:6091528-6091547 | None:intergenic | 30.0% | |
| ! | TCATACATATGCTTTTCTAG+AGG | + | chr4_1:6091615-6091634 | None:intergenic | 30.0% |
| GGAGAATCAATCAAATGAAT+TGG | - | chr4_1:6091826-6091845 | Msa0532060:intron | 30.0% | |
| !! | TGATTGAAGTTCTGTTTTGA+AGG | + | chr4_1:6091922-6091941 | None:intergenic | 30.0% |
| CATGTAAAACTATAACATGG+AGG | + | chr4_1:6091946-6091965 | None:intergenic | 30.0% | |
| !! | TGAGTTCTAAACTGTATTCT+TGG | + | chr4_1:6092048-6092067 | None:intergenic | 30.0% |
| ! | AAGAATACAGTTTAGAACTC+AGG | - | chr4_1:6092047-6092066 | Msa0532060:intron | 30.0% |
| ! | AGAATACAGTTTAGAACTCA+GGG | - | chr4_1:6092048-6092067 | Msa0532060:intron | 30.0% |
| AATTATGGAGTGCAATGATA+AGG | - | chr4_1:6092095-6092114 | Msa0532060:intron | 30.0% | |
| GTATGTTAATGTTATGGTGT+GGG | + | chr4_1:6092142-6092161 | None:intergenic | 30.0% | |
| TGTATGTTAATGTTATGGTG+TGG | + | chr4_1:6092143-6092162 | None:intergenic | 30.0% | |
| !!! | AATGATTTTTTTTTGCCGGT+AGG | + | chr4_1:6092351-6092370 | None:intergenic | 30.0% |
| !! | ATTTTTGAGGATTATTGGTC+CGG | - | chr4_1:6092446-6092465 | Msa0532060:intron | 30.0% |
| CAATTTCTTCCTTTCATACA+GGG | + | chr4_1:6092472-6092491 | None:intergenic | 30.0% | |
| ATAGAATGCGAGAAAAACTT+AGG | - | chr4_1:6092686-6092705 | Msa0532060:intron | 30.0% | |
| ! | TTCAATGGTTCTATAGTTCA+TGG | - | chr4_1:6092965-6092984 | Msa0532060:CDS | 30.0% |
| GATCAGTAATGAAGTCATTA+CGG | + | chr4_1:6093180-6093199 | None:intergenic | 30.0% | |
| TCCACTTGTTCACATTAAAA+CGG | + | chr4_1:6093228-6093247 | None:intergenic | 30.0% | |
| ! | TACTATAGTGGAAAAAGTTC+TGG | - | chr4_1:6093273-6093292 | Msa0532060:intron | 30.0% |
| GTTATTAACTTAATTGGCTG+GGG | + | chr4_1:6093426-6093445 | None:intergenic | 30.0% | |
| CGTTATTAACTTAATTGGCT+GGG | + | chr4_1:6093427-6093446 | None:intergenic | 30.0% | |
| ACGTTATTAACTTAATTGGC+TGG | + | chr4_1:6093428-6093447 | None:intergenic | 30.0% | |
| AGCCAATTAAGTTAATAACG+TGG | - | chr4_1:6093427-6093446 | Msa0532060:intron | 30.0% | |
| GCCAATTAAGTTAATAACGT+GGG | - | chr4_1:6093428-6093447 | Msa0532060:intron | 30.0% | |
| CCAATTAAGTTAATAACGTG+GGG | - | chr4_1:6093429-6093448 | Msa0532060:intron | 30.0% | |
| CAATTAAGTTAATAACGTGG+GGG | - | chr4_1:6093430-6093449 | Msa0532060:intron | 30.0% | |
| GGTATTAATGTTATACAACG+TGG | + | chr4_1:6093754-6093773 | None:intergenic | 30.0% | |
| ACTGAATGTGTGATCTTAAT+AGG | + | chr4_1:6093795-6093814 | None:intergenic | 30.0% | |
| ATGAACAAATGATGGTATGA+TGG | + | chr4_1:6093978-6093997 | None:intergenic | 30.0% | |
| ! | TATGTTTTCTAATGCCATAG+GGG | + | chr4_1:6094123-6094142 | None:intergenic | 30.0% |
| TTGGGCAAAAATTTCAAGAA+AGG | + | chr4_1:6094183-6094202 | None:intergenic | 30.0% | |
| TTTCGAAGAAAACAAATTGG+AGG | + | chr4_1:6094642-6094661 | None:intergenic | 30.0% | |
| TCGAAATTTATTGAGGATTG+TGG | - | chr4_1:6094656-6094675 | Msa0532060:intron | 30.0% | |
| TAAAATTTACAGGGTAGGAT+AGG | + | chr4_1:6094949-6094968 | None:intergenic | 30.0% | |
| !! | GATAAGGAGCATTAAAAACA+AGG | - | chr4_1:6095006-6095025 | Msa0532060:intron | 30.0% |
| CATTAAAAACAAGGCAAGTA+AGG | - | chr4_1:6095015-6095034 | Msa0532060:intron | 30.0% | |
| !!! | AGTAAGATGTCGATTTTACA+TGG | - | chr4_1:6095099-6095118 | Msa0532060:intron | 30.0% |
| ! | TTATCTTTTATACTCACTCG+TGG | + | chr4_1:6095799-6095818 | None:intergenic | 30.0% |
| ! | AGGAATTTGCTTTAAACTCT+CGG | - | chr4_1:6096110-6096129 | Msa0532060:five_prime_UTR | 30.0% |
| GGCCTTAGTTTACTAAAATC+TGG | + | chr4_1:6088376-6088395 | None:intergenic | 35.0% | |
| TGTTTACTCCTATTCCTTAC+CGG | - | chr4_1:6088939-6088958 | Msa0532060:CDS | 35.0% | |
| !! | GTATTAAGGTAATTTTGGGG+TGG | + | chr4_1:6089068-6089087 | None:intergenic | 35.0% |
| !! | GGGGTATTAAGGTAATTTTG+GGG | + | chr4_1:6089071-6089090 | None:intergenic | 35.0% |
| ! | ATGACAGTTAACTGCCTTTT+GGG | + | chr4_1:6089091-6089110 | None:intergenic | 35.0% |
| ! | AATGACAGTTAACTGCCTTT+TGG | + | chr4_1:6089092-6089111 | None:intergenic | 35.0% |
| AAAGGCAGTTAACTGTCATT+CGG | - | chr4_1:6089092-6089111 | Msa0532060:CDS | 35.0% | |
| GCCATAATAGCACTTCAAAT+GGG | - | chr4_1:6089278-6089297 | Msa0532060:intron | 35.0% | |
| TCATACATATGCTTTCGTAG+AGG | + | chr4_1:6089314-6089333 | None:intergenic | 35.0% | |
| TCTTAACTTTCTCTTTGCCA+TGG | + | chr4_1:6089388-6089407 | None:intergenic | 35.0% | |
| ACAGAGAGCAAATGTCAAAT+CGG | - | chr4_1:6089446-6089465 | Msa0532060:CDS | 35.0% | |
| ! | ATTTGAAGTTGATCCTGAGT+TGG | - | chr4_1:6089494-6089513 | Msa0532060:intron | 35.0% |
| GTCCCTAATAACACTTCAAA+TGG | - | chr4_1:6089656-6089675 | Msa0532060:intron | 35.0% | |
| ! | GCCCATTTGAAGTGTTATTA+GGG | + | chr4_1:6089661-6089680 | None:intergenic | 35.0% |
| TCATACATATGCTTTCGTAG+CGG | + | chr4_1:6089314-6089333 | None:intergenic | 35.0% | |
| TTCAATTCCCAGTAAGGAAT+AGG | + | chr4_1:6089956-6089975 | None:intergenic | 35.0% | |
| !! | TTTGGTAAACGGGTTATTTC+TGG | - | chr4_1:6089988-6090007 | Msa0532060:intron | 35.0% |
| TGATACATATGCTTTCGTAG+AGG | + | chr4_1:6090072-6090091 | None:intergenic | 35.0% | |
| CGATCTCTCAAATTTCTCTT+TGG | + | chr4_1:6090148-6090167 | None:intergenic | 35.0% | |
| TTTGTAGAGGAGCAAGAAAT+AGG | - | chr4_1:6090268-6090287 | Msa0532060:intron | 35.0% | |
| TTCAATTCCCAGTAAGGAAT+AGG | + | chr4_1:6089956-6089975 | None:intergenic | 35.0% | |
| GGCCATAATAACACTTCAAA+TGG | - | chr4_1:6090390-6090409 | Msa0532060:intron | 35.0% | |
| ! | GCCCATTTGAAGTGTTATTA+TGG | + | chr4_1:6089661-6089680 | None:intergenic | 35.0% |
| TTCAAAAGACTTGACGCTTT+AGG | + | chr4_1:6090525-6090544 | None:intergenic | 35.0% | |
| TCTTGCTTCTCTACAAACTT+GGG | + | chr4_1:6090618-6090637 | None:intergenic | 35.0% | |
| AACATCCAGAAACCAAAATC+AGG | + | chr4_1:6090714-6090733 | None:intergenic | 35.0% | |
| GCCCTAATAGATCATCAAAA+TGG | - | chr4_1:6090754-6090773 | Msa0532060:intron | 35.0% | |
| !! | GGCCATTTTGATGATCTATT+AGG | + | chr4_1:6090759-6090778 | None:intergenic | 35.0% |
| CAAAGAGAAGTTTAAGAGGT+AGG | - | chr4_1:6090867-6090886 | Msa0532060:intron | 35.0% | |
| ! | TTCTGAAGACTTGACACTTT+AGG | + | chr4_1:6090893-6090912 | None:intergenic | 35.0% |
| AGTTGATCTTGAGTTTGTAG+AGG | - | chr4_1:6090976-6090995 | Msa0532060:intron | 35.0% | |
| GCCCTAATAGCATTTCAAAT+GGG | - | chr4_1:6091131-6091150 | Msa0532060:intron | 35.0% | |
| ! | GCCCATTTGAAATGCTATTA+GGG | + | chr4_1:6091135-6091154 | None:intergenic | 35.0% |
| CAAAGAGAAAGTTAAGAGGT+AGG | - | chr4_1:6091244-6091263 | Msa0532060:intron | 35.0% | |
| ! | AAAGAGTGCAAATGTCAAAC+CGG | - | chr4_1:6091299-6091318 | Msa0532060:intron | 35.0% |
| !! | GATGGATTATCAAGAACAAC+CGG | + | chr4_1:6091321-6091340 | None:intergenic | 35.0% |
| TTTGGTAAACAGATTGTGTC+TGG | - | chr4_1:6091531-6091550 | Msa0532060:CDS | 35.0% | |
| ! | GCCTATTTGAAGTGCTATTA+GGG | + | chr4_1:6091583-6091602 | None:intergenic | 35.0% |
| !! | GCTTTTCTAGAGGAACATAT+AGG | + | chr4_1:6091605-6091624 | None:intergenic | 35.0% |
| ! | TTCTGAAGACTTGACACTTT+AGG | + | chr4_1:6090893-6090912 | None:intergenic | 35.0% |
| ! | GAATACAGTTTAGAACTCAG+GGG | - | chr4_1:6092049-6092068 | Msa0532060:intron | 35.0% |
| !!! | TTGAGCCTCACTTATTTTTG+AGG | - | chr4_1:6092433-6092452 | Msa0532060:intron | 35.0% |
| GCAATTTCTTCCTTTCATAC+AGG | + | chr4_1:6092473-6092492 | None:intergenic | 35.0% | |
| ! | TTCTATAGTTCATGGCTTTG+AGG | - | chr4_1:6092973-6092992 | Msa0532060:CDS | 35.0% |
| AGGCGTAAGAATAAAGTAAG+AGG | - | chr4_1:6093052-6093071 | Msa0532060:intron | 35.0% | |
| AAAGTAAGAGGACAAACAAG+AGG | - | chr4_1:6093064-6093083 | Msa0532060:intron | 35.0% | |
| AAGTAAGAGGACAAACAAGA+GGG | - | chr4_1:6093065-6093084 | Msa0532060:intron | 35.0% | |
| ATGTTGATATTCATCCTACG+AGG | - | chr4_1:6093134-6093153 | Msa0532060:intron | 35.0% | |
| CCACTTGTTCACATTAAAAC+GGG | + | chr4_1:6093227-6093246 | None:intergenic | 35.0% | |
| CCCCACGTTATTAACTTAAT+TGG | + | chr4_1:6093432-6093451 | None:intergenic | 35.0% | |
| TTGGTGTGGATTTCTTCTAT+GGG | + | chr4_1:6093466-6093485 | None:intergenic | 35.0% | |
| AGGTTACTATGCAGTATGTT+GGG | + | chr4_1:6093775-6093794 | None:intergenic | 35.0% | |
| TAGGTTACTATGCAGTATGT+TGG | + | chr4_1:6093776-6093795 | None:intergenic | 35.0% | |
| ! | AGCCTTATAAGGACTACTTT+GGG | + | chr4_1:6093827-6093846 | None:intergenic | 35.0% |
| ATGTATGATGACTGCAATGA+AGG | + | chr4_1:6093886-6093905 | None:intergenic | 35.0% | |
| GCATTGAGTAAAATGTGTCA+TGG | - | chr4_1:6094388-6094407 | Msa0532060:intron | 35.0% | |
| AAACACACACCAATGTAGTA+CGG | + | chr4_1:6094461-6094480 | None:intergenic | 35.0% | |
| CAGAGTCAAAACAGAACAAA+TGG | + | chr4_1:6094606-6094625 | None:intergenic | 35.0% | |
| !!! | CATTTGTTCTGTTTTGACTC+TGG | - | chr4_1:6094604-6094623 | Msa0532060:intron | 35.0% |
| TTTATTGAGGATTGTGGATG+AGG | - | chr4_1:6094662-6094681 | Msa0532060:intron | 35.0% | |
| TTCAAGATACAGATGTGGTT+CGG | - | chr4_1:6094732-6094751 | Msa0532060:intron | 35.0% | |
| TGAGTCTGATTGGAAATTCT+TGG | - | chr4_1:6094874-6094893 | Msa0532060:CDS | 35.0% | |
| ! | TTTTAGCAGTCCTTCTTTTG+AGG | - | chr4_1:6094904-6094923 | Msa0532060:intron | 35.0% |
| AAAAGTCACACGATTTGACA+AGG | + | chr4_1:6095132-6095151 | None:intergenic | 35.0% | |
| ATGGCAGATAACACACAAAA+AGG | - | chr4_1:6095233-6095252 | Msa0532060:CDS | 35.0% | |
| ATAACACACAAAAAGGCCAA+TGG | - | chr4_1:6095240-6095259 | Msa0532060:CDS | 35.0% | |
| TAACACACAAAAAGGCCAAT+GGG | - | chr4_1:6095241-6095260 | Msa0532060:CDS | 35.0% | |
| TCCACAATTTAAACAAGTGG+CGG | + | chr4_1:6095354-6095373 | None:intergenic | 35.0% | |
| CAGTCCACAATTTAAACAAG+TGG | + | chr4_1:6095357-6095376 | None:intergenic | 35.0% | |
| AATGGAAACTGCCTTTAAGT+CGG | - | chr4_1:6095477-6095496 | Msa0532060:intron | 35.0% | |
| ! | CAATCATATATGCAGGGTTT+TGG | - | chr4_1:6095511-6095530 | Msa0532060:intron | 35.0% |
| !! | ATTAAGAGCCAAACTTGTTG+AGG | - | chr4_1:6095639-6095658 | Msa0532060:intron | 35.0% |
| GTATCGTCAAAAAGATATGC+AGG | - | chr4_1:6095720-6095739 | Msa0532060:intron | 35.0% | |
| AATATTGAGACAATGCTGAC+TGG | + | chr4_1:6095774-6095793 | None:intergenic | 35.0% | |
| ! | CTTTTCTTTATCGTCTGATG+AGG | + | chr4_1:6095910-6095929 | None:intergenic | 35.0% |
| AGCTAGATATCGCTTGTATT+AGG | - | chr4_1:6095995-6096014 | Msa0532060:CDS | 35.0% | |
| ! | GGTTTACATTTGGAGTATGT+AGG | - | chr4_1:6096090-6096109 | Msa0532060:five_prime_UTR | 35.0% |
| AGAAAATGGCTCAAGTAACG+GGG | + | chr4_1:6088397-6088416 | None:intergenic | 40.0% | |
| CAGAAAATGGCTCAAGTAAC+GGG | + | chr4_1:6088398-6088417 | None:intergenic | 40.0% | |
| GCAGAAAATGGCTCAAGTAA+CGG | + | chr4_1:6088399-6088418 | None:intergenic | 40.0% | |
| TTCAGAAGACTTGACGCTTT+AGG | + | chr4_1:6088684-6088703 | None:intergenic | 40.0% | |
| AGTTGATCTTGGGTTTGTAG+AGG | - | chr4_1:6088767-6088786 | Msa0532060:CDS | 40.0% | |
| TATTCTGCTCCAGTTGATCT+TGG | - | chr4_1:6088825-6088844 | Msa0532060:intron | 40.0% | |
| ATTCTGCTCCAGTTGATCTT+GGG | - | chr4_1:6088826-6088845 | Msa0532060:intron | 40.0% | |
| TCTACAAACCCAAGATCAAC+TGG | + | chr4_1:6088768-6088787 | None:intergenic | 40.0% | |
| AGTTGATCTTGGGTTTGTAG+AGG | - | chr4_1:6088767-6088786 | Msa0532060:CDS | 40.0% | |
| GTTTACTCCTATTCCTTACC+GGG | - | chr4_1:6088940-6088959 | Msa0532060:CDS | 40.0% | |
| TTCAAATCCCGGTAAGGAAT+AGG | + | chr4_1:6088950-6088969 | None:intergenic | 40.0% | |
| TTTGGACTGTGTTCAAATCC+CGG | + | chr4_1:6088961-6088980 | None:intergenic | 40.0% | |
| TCAGGGGAAAATTGCTCATT+AGG | - | chr4_1:6089023-6089042 | Msa0532060:CDS | 40.0% | |
| !!! | AACTGCCTTTTGGGGTATTA+AGG | + | chr4_1:6089082-6089101 | None:intergenic | 40.0% |
| ! | TGACAGTTAACTGCCTTTTG+GGG | + | chr4_1:6089090-6089109 | None:intergenic | 40.0% |
| ! | AACGGCAGTTAAGTGTTGTT+CGG | + | chr4_1:6089176-6089195 | None:intergenic | 40.0% |
| CAGGGAAGCTTAAGAGAAAT+TGG | - | chr4_1:6089225-6089244 | Msa0532060:CDS | 40.0% | |
| GGCCATAATAGCACTTCAAA+TGG | - | chr4_1:6089277-6089296 | Msa0532060:intron | 40.0% | |
| ! | GCCCATTTGAAGTGCTATTA+TGG | + | chr4_1:6089282-6089301 | None:intergenic | 40.0% |
| ! | GGCCCATTTGAAGTGTTATT+AGG | + | chr4_1:6089662-6089681 | None:intergenic | 40.0% |
| ! | TTCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6089796-6089815 | None:intergenic | 40.0% |
| GGCCTTAGAACACTTCAAAT+GGG | - | chr4_1:6090036-6090055 | Msa0532060:intron | 40.0% | |
| ! | TTCTGAAGAGTAGACGCTTT+AGG | + | chr4_1:6090172-6090191 | None:intergenic | 40.0% |
| AGTTGATCCTGAGTTTGTAG+AGG | - | chr4_1:6090255-6090274 | Msa0532060:intron | 40.0% | |
| GAGCAAGAAATAGGTACACA+TGG | - | chr4_1:6090277-6090296 | Msa0532060:intron | 40.0% | |
| AGCATATCATGCTTTCGTAG+AGG | + | chr4_1:6090427-6090446 | None:intergenic | 40.0% | |
| !! | AGCGTCAAGTCTTTTGAAGA+AGG | - | chr4_1:6090527-6090546 | Msa0532060:intron | 40.0% |
| !! | GCGTCAAGTCTTTTGAAGAA+GGG | - | chr4_1:6090528-6090547 | Msa0532060:intron | 40.0% |
| CTCTTGCTTCTCTACAAACT+TGG | + | chr4_1:6090619-6090638 | None:intergenic | 40.0% | |
| TTTGTAGAGAAGCAAGAGAC+AGG | - | chr4_1:6090621-6090640 | Msa0532060:intron | 40.0% | |
| !!! | AGAGTCCTGATTTTGGTTTC+TGG | - | chr4_1:6090706-6090725 | Msa0532060:intron | 40.0% |
| ACAGAGCGCAAATGTCAAAA+CGG | - | chr4_1:6090922-6090941 | Msa0532060:intron | 40.0% | |
| ATTGAATGCAGTCCAGATGT+TGG | - | chr4_1:6091065-6091084 | Msa0532060:intron | 40.0% | |
| ! | ACAACTCGTTTTCCAACATC+TGG | + | chr4_1:6091080-6091099 | None:intergenic | 40.0% |
| ! | GTTGGAAAACGAGTTGTTTC+TGG | - | chr4_1:6091083-6091102 | Msa0532060:intron | 40.0% |
| GGCCCTAATAGCATTTCAAA+TGG | - | chr4_1:6091130-6091149 | Msa0532060:intron | 40.0% | |
| ! | GGCCCATTTGAAATGCTATT+AGG | + | chr4_1:6091136-6091155 | None:intergenic | 40.0% |
| ! | TTCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6089796-6089815 | None:intergenic | 40.0% |
| TCTACAAACCCAGTATCAAG+TGG | + | chr4_1:6091423-6091442 | None:intergenic | 40.0% | |
| ACTTGATACTGGGTTTGTAG+AGG | - | chr4_1:6091422-6091441 | Msa0532060:CDS | 40.0% | |
| GCCCTAATAGCACTTCAAAT+AGG | - | chr4_1:6091579-6091598 | Msa0532060:CDS | 40.0% | |
| ! | GGCCTATTTGAAGTGCTATT+AGG | + | chr4_1:6091584-6091603 | None:intergenic | 40.0% |
| CAAAGAGAAAGGGAAGATGT+CGG | - | chr4_1:6091690-6091709 | Msa0532060:CDS | 40.0% | |
| AGTGTCAAGTCTTCAGAAGA+AGG | - | chr4_1:6091718-6091737 | Msa0532060:CDS | 40.0% | |
| GCAACTTCCAACTCATTTGA+TGG | + | chr4_1:6091785-6091804 | None:intergenic | 40.0% | |
| ! | TTTAGAACTCAGGGGATGTA+AGG | - | chr4_1:6092057-6092076 | Msa0532060:intron | 40.0% |
| TATGGAGTGCAATGATAAGG+AGG | - | chr4_1:6092098-6092117 | Msa0532060:intron | 40.0% | |
| TGCAATGATAAGGAGGTTGA+AGG | - | chr4_1:6092105-6092124 | Msa0532060:intron | 40.0% | |
| TTAATGTTATGGTGTGGGTG+GGG | + | chr4_1:6092137-6092156 | None:intergenic | 40.0% | |
| GTTAATGTTATGGTGTGGGT+GGG | + | chr4_1:6092138-6092157 | None:intergenic | 40.0% | |
| TGTTAATGTTATGGTGTGGG+TGG | + | chr4_1:6092139-6092158 | None:intergenic | 40.0% | |
| ATGTTAAAAATCAGTGCCCG+AGG | - | chr4_1:6092297-6092316 | Msa0532060:intron | 40.0% | |
| TGTTAAAAATCAGTGCCCGA+GGG | - | chr4_1:6092298-6092317 | Msa0532060:intron | 40.0% | |
| ! | AGTTGGTCTGTAAGTTTGCT+TGG | - | chr4_1:6092762-6092781 | Msa0532060:intron | 40.0% |
| TTCTGATTCATTGACCCTCT+TGG | + | chr4_1:6092903-6092922 | None:intergenic | 40.0% | |
| AACTTTCCATCTGCATTCTG+TGG | + | chr4_1:6092933-6092952 | None:intergenic | 40.0% | |
| TTGCTTCAGATACAAGAGTC+AGG | - | chr4_1:6093032-6093051 | Msa0532060:intron | 40.0% | |
| !! | CCCGTTTTAATGTGAACAAG+TGG | - | chr4_1:6093224-6093243 | Msa0532060:intron | 40.0% |
| !! | ATTGGCATTCACGTTGATTC+TGG | - | chr4_1:6093302-6093321 | Msa0532060:CDS | 40.0% |
| ACATAATCAGACGGCTTAGT+GGG | + | chr4_1:6093376-6093395 | None:intergenic | 40.0% | |
| AAAATAGAGTCCCCTCAACT+GGG | + | chr4_1:6093401-6093420 | None:intergenic | 40.0% | |
| TGGTGTGGATTTCTTCTATG+GGG | + | chr4_1:6093465-6093484 | None:intergenic | 40.0% | |
| GTTGGTGTGGATTTCTTCTA+TGG | + | chr4_1:6093467-6093486 | None:intergenic | 40.0% | |
| AATGTTATACAACGTGGGAG+TGG | + | chr4_1:6093748-6093767 | None:intergenic | 40.0% | |
| TGCCCAAAGTAGTCCTTATA+AGG | - | chr4_1:6093822-6093841 | Msa0532060:intron | 40.0% | |
| ! | GAGCCTTATAAGGACTACTT+TGG | + | chr4_1:6093828-6093847 | None:intergenic | 40.0% |
| AAGTAGTCCTTATAAGGCTC+AGG | - | chr4_1:6093828-6093847 | Msa0532060:intron | 40.0% | |
| ! | CAAAAGTCCTGAGCCTTATA+AGG | + | chr4_1:6093838-6093857 | None:intergenic | 40.0% |
| ! | AGGACTTTTGATGTGTGTGT+TGG | - | chr4_1:6093848-6093867 | Msa0532060:intron | 40.0% |
| AACCCAAAAAGCTAGCTCAT+GGG | - | chr4_1:6094024-6094043 | Msa0532060:intron | 40.0% | |
| !!! | ATCCCATGAGCTAGCTTTTT+GGG | + | chr4_1:6094029-6094048 | None:intergenic | 40.0% |
| AGGAGTGACGAAACTTTCTA+CGG | - | chr4_1:6094057-6094076 | Msa0532060:CDS | 40.0% | |
| AAACTTTCTACGGACCACTT+TGG | - | chr4_1:6094067-6094086 | Msa0532060:CDS | 40.0% | |
| TTTGGCCATATCTTCGATGT+GGG | - | chr4_1:6094085-6094104 | Msa0532060:CDS | 40.0% | |
| !!! | TTTTTTTGGGGTGTGTGTGT+TGG | - | chr4_1:6094233-6094252 | Msa0532060:intron | 40.0% |
| CTTTGAACAACTAGTTGCAG+AGG | - | chr4_1:6094301-6094320 | Msa0532060:intron | 40.0% | |
| TAAGGGTAAGGGAAAATCCT+TGG | - | chr4_1:6094419-6094438 | Msa0532060:CDS | 40.0% | |
| ACTTCTCTTCCGTACTACAT+TGG | - | chr4_1:6094449-6094468 | Msa0532060:CDS | 40.0% | |
| GAGACTTCAAGATACAGATG+TGG | - | chr4_1:6094727-6094746 | Msa0532060:intron | 40.0% | |
| ATGAAGCAGGCCGTTTATAT+CGG | - | chr4_1:6094768-6094787 | Msa0532060:CDS | 40.0% | |
| ATGACGTCAATGAGTCTGAT+TGG | - | chr4_1:6094864-6094883 | Msa0532060:CDS | 40.0% | |
| AGCGGATACATCATACTAGT+GGG | - | chr4_1:6095044-6095063 | Msa0532060:intron | 40.0% | |
| ATCAAAGCTAGCTGCTTGAA+AGG | + | chr4_1:6095077-6095096 | None:intergenic | 40.0% | |
| CTAGGATATGCATCTAACAG+CGG | - | chr4_1:6095172-6095191 | Msa0532060:CDS | 40.0% | |
| TAGGATATGCATCTAACAGC+GGG | - | chr4_1:6095173-6095192 | Msa0532060:CDS | 40.0% | |
| ! | AGCCTGATTTGCAGACATTA+TGG | - | chr4_1:6095214-6095233 | Msa0532060:CDS | 40.0% |
| TGCCATAATGTCTGCAAATC+AGG | + | chr4_1:6095219-6095238 | None:intergenic | 40.0% | |
| AACACACAAAAAGGCCAATG+GGG | - | chr4_1:6095242-6095261 | Msa0532060:CDS | 40.0% | |
| TCCGCCACTTGTTTAAATTG+TGG | - | chr4_1:6095350-6095369 | Msa0532060:intron | 40.0% | |
| TGGGAAGCAATCATATATGC+AGG | - | chr4_1:6095504-6095523 | Msa0532060:intron | 40.0% | |
| GGGAAGCAATCATATATGCA+GGG | - | chr4_1:6095505-6095524 | Msa0532060:intron | 40.0% | |
| !!! | TATATGCAGGGTTTTGGAGA+AGG | - | chr4_1:6095517-6095536 | Msa0532060:intron | 40.0% |
| TATGCAGGAAATCAACAGTC+AGG | - | chr4_1:6095735-6095754 | Msa0532060:intron | 40.0% | |
| CGCTTGTATTAGGAAAGTGA+AGG | - | chr4_1:6096005-6096024 | Msa0532060:CDS | 40.0% | |
| CCAGTCTACTAGTGACATTA+GGG | + | chr4_1:6096207-6096226 | None:intergenic | 40.0% | |
| TCCAGTCTACTAGTGACATT+AGG | + | chr4_1:6096208-6096227 | None:intergenic | 40.0% | |
| ACAAAATCAACTGCACAAGC+AGG | + | chr4_1:6096231-6096250 | None:intergenic | 40.0% | |
| !! | GCTCGTTTGAAGCACTGTTA+TGG | + | chr4_1:6088549-6088568 | None:intergenic | 45.0% |
| GCTTTCATGGAGGAACACAT+AGG | + | chr4_1:6088571-6088590 | None:intergenic | 45.0% | |
| AGGTACCATGGCAAAGAGAA+AGG | - | chr4_1:6088647-6088666 | Msa0532060:exon | 45.0% | |
| GGTACCATGGCAAAGAGAAA+GGG | - | chr4_1:6088648-6088667 | Msa0532060:exon | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6088655-6088674 | None:intergenic | 45.0% | |
| ATGGCAAAGAGAAAGGGAAG+AGG | - | chr4_1:6088654-6088673 | Msa0532060:exon | 45.0% | |
| ! | AGCGTCAAGTCTTCTGAAGA+AGG | - | chr4_1:6088686-6088705 | Msa0532060:CDS | 45.0% |
| TTTGTAGAGGAGCTGTAGTC+AGG | - | chr4_1:6088849-6088868 | Msa0532060:intron | 45.0% | |
| TTGTAGAGGAGCTGTAGTCA+GGG | - | chr4_1:6088850-6088869 | Msa0532060:intron | 45.0% | |
| ACTGTGTTCAAATCCCGGTA+AGG | + | chr4_1:6088956-6088975 | None:intergenic | 45.0% | |
| !!! | AAGGTAATTTTGGGGTGGCT+GGG | + | chr4_1:6089063-6089082 | None:intergenic | 45.0% |
| !!! | TAAGGTAATTTTGGGGTGGC+TGG | + | chr4_1:6089064-6089083 | None:intergenic | 45.0% |
| GAACAACACTTAACTGCCGT+TGG | - | chr4_1:6089175-6089194 | Msa0532060:CDS | 45.0% | |
| TTCTCTTAAGCTTCCCTGAG+TGG | + | chr4_1:6089223-6089242 | None:intergenic | 45.0% | |
| ! | GTGCTATTATGGCCCTGAAA+AGG | + | chr4_1:6089271-6089290 | None:intergenic | 45.0% |
| TGCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6089417-6089436 | None:intergenic | 45.0% | |
| CCAACTCGTTTACCCAAATC+TGG | + | chr4_1:6089606-6089625 | None:intergenic | 45.0% | |
| CCAGATTTGGGTAAACGAGT+TGG | - | chr4_1:6089603-6089622 | Msa0532060:CDS | 45.0% | |
| !! | TTGGGTAAACGAGTTGGTTC+TGG | - | chr4_1:6089609-6089628 | Msa0532060:CDS | 45.0% |
| AGCGTCAAGTCTTCAGAAGA+AGG | - | chr4_1:6089798-6089817 | Msa0532060:CDS | 45.0% | |
| AGTTGATCCTGAGCTTGTAG+AGG | - | chr4_1:6089879-6089898 | Msa0532060:CDS | 45.0% | |
| GGGCCTTAGAACACTTCAAA+TGG | - | chr4_1:6090035-6090054 | Msa0532060:intron | 45.0% | |
| ! | GGCCCATTTGAAGTGTTCTA+AGG | + | chr4_1:6090041-6090060 | None:intergenic | 45.0% |
| AGCGTCTACTCTTCAGAAGA+AGG | - | chr4_1:6090174-6090193 | Msa0532060:intron | 45.0% | |
| TCTTGCTCCTCTACAAACTC+AGG | + | chr4_1:6090265-6090284 | None:intergenic | 45.0% | |
| AACACTTCAAATGGGCCTAC+AGG | - | chr4_1:6089665-6089684 | Msa0532060:intron | 45.0% | |
| AGGTACCATGGCAAAGAGAA+AGG | - | chr4_1:6088647-6088666 | Msa0532060:exon | 45.0% | |
| GGTACCATGGCAAAGAGAAA+GGG | - | chr4_1:6088648-6088667 | Msa0532060:exon | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6088655-6088674 | None:intergenic | 45.0% | |
| ATGGCAAAGAGAAAGGGAAG+AGG | - | chr4_1:6088654-6088673 | Msa0532060:exon | 45.0% | |
| CAAAGAGAAAGGGAAGAGGT+CGG | - | chr4_1:6088658-6088677 | Msa0532060:exon | 45.0% | |
| AAGCAAGAGACAGGTACACA+TGG | - | chr4_1:6090630-6090649 | Msa0532060:intron | 45.0% | |
| AGTGTCAAGTCTTCAGAAGC+AGG | - | chr4_1:6090895-6090914 | Msa0532060:intron | 45.0% | |
| GTGTCAAGTCTTCAGAAGCA+GGG | - | chr4_1:6090896-6090915 | Msa0532060:intron | 45.0% | |
| TCTTGAGTTTGTAGAGGAGC+AGG | - | chr4_1:6090982-6091001 | Msa0532060:intron | 45.0% | |
| CCTGTTAACTCCTACCTTAC+CGG | - | chr4_1:6091040-6091059 | Msa0532060:intron | 45.0% | |
| CTGTTAACTCCTACCTTACC+GGG | - | chr4_1:6091041-6091060 | Msa0532060:intron | 45.0% | |
| CATTCAATTCCCGGTAAGGT+AGG | + | chr4_1:6091053-6091072 | None:intergenic | 45.0% | |
| ACTGCATTCAATTCCCGGTA+AGG | + | chr4_1:6091057-6091076 | None:intergenic | 45.0% | |
| TCTGGACTGCATTCAATTCC+CGG | + | chr4_1:6091062-6091081 | None:intergenic | 45.0% | |
| AGTTGATCCCGAGTTTGTAG+AGG | - | chr4_1:6091353-6091372 | Msa0532060:intron | 45.0% | |
| TGTCTCCTCCTCTACAAACT+CGG | + | chr4_1:6091364-6091383 | None:intergenic | 45.0% | |
| AACCCAGTATCAAGTGGAAC+AGG | + | chr4_1:6091417-6091436 | None:intergenic | 45.0% | |
| TACTGGGTTTGTAGAGGAGT+AGG | - | chr4_1:6091428-6091447 | Msa0532060:CDS | 45.0% | |
| AGGTTCCATGGCAAAGAGAA+AGG | - | chr4_1:6091679-6091698 | Msa0532060:CDS | 45.0% | |
| GGTTCCATGGCAAAGAGAAA+GGG | - | chr4_1:6091680-6091699 | Msa0532060:CDS | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6088655-6088674 | None:intergenic | 45.0% | |
| AGATGATCCTGACTCTGTAG+AGG | - | chr4_1:6091850-6091869 | Msa0532060:intron | 45.0% | |
| TCAGGGGATGTAAGGTTGTT+GGG | - | chr4_1:6092065-6092084 | Msa0532060:intron | 45.0% | |
| TTCTTCCTTTCATACAGGGC+CGG | + | chr4_1:6092468-6092487 | None:intergenic | 45.0% | |
| ! | TATAGCCACGTAGTGGGATA+AGG | + | chr4_1:6092669-6092688 | None:intergenic | 45.0% |
| GCATTCTATAGCCACGTAGT+GGG | + | chr4_1:6092675-6092694 | None:intergenic | 45.0% | |
| TTGTTAATGCAAAGGGGACC+AGG | - | chr4_1:6092873-6092892 | Msa0532060:CDS | 45.0% | |
| TGTTAATGCAAAGGGGACCA+GGG | - | chr4_1:6092874-6092893 | Msa0532060:CDS | 45.0% | |
| AACCATCCACAGAATGCAGA+TGG | - | chr4_1:6092924-6092943 | Msa0532060:CDS | 45.0% | |
| TTCCATCTGCATTCTGTGGA+TGG | + | chr4_1:6092929-6092948 | None:intergenic | 45.0% | |
| AAGCGTAAACTGAGTCGAGA+TGG | - | chr4_1:6093103-6093122 | Msa0532060:intron | 45.0% | |
| ACTGAGTCGAGATGGAAAGT+TGG | - | chr4_1:6093111-6093130 | Msa0532060:intron | 45.0% | |
| TGATATTCATCCTACGAGGC+TGG | - | chr4_1:6093138-6093157 | Msa0532060:intron | 45.0% | |
| GTAATGAAGTCATTACGGCC+TGG | + | chr4_1:6093175-6093194 | None:intergenic | 45.0% | |
| GACATAATCAGACGGCTTAG+TGG | + | chr4_1:6093377-6093396 | None:intergenic | 45.0% | |
| AACTGGGGGACATAATCAGA+CGG | + | chr4_1:6093385-6093404 | None:intergenic | 45.0% | |
| TGATTATGTCCCCCAGTTGA+GGG | - | chr4_1:6093387-6093406 | Msa0532060:CDS | 45.0% | |
| AAATAGAGTCCCCTCAACTG+GGG | + | chr4_1:6093400-6093419 | None:intergenic | 45.0% | |
| CAAAATAGAGTCCCCTCAAC+TGG | + | chr4_1:6093402-6093421 | None:intergenic | 45.0% | |
| ! | CAGTTGAGGGGACTCTATTT+TGG | - | chr4_1:6093400-6093419 | Msa0532060:CDS | 45.0% |
| TTAATAACGTGGGGGCTTCA+AGG | - | chr4_1:6093438-6093457 | Msa0532060:intron | 45.0% | |
| GATGACATGAAACAGAGAGG+TGG | + | chr4_1:6093504-6093523 | None:intergenic | 45.0% | |
| GAGGATGACATGAAACAGAG+AGG | + | chr4_1:6093507-6093526 | None:intergenic | 45.0% | |
| CATGAAAATGAGCAACGCAG+AGG | + | chr4_1:6093526-6093545 | None:intergenic | 45.0% | |
| GATGTGTGTGTTGGAAACAC+TGG | - | chr4_1:6093857-6093876 | Msa0532060:intron | 45.0% | |
| ATCATACATCCATGCCCCAA+AGG | - | chr4_1:6093897-6093916 | Msa0532060:intron | 45.0% | |
| ! | TGATGGTATGATGGAATGCC+AGG | + | chr4_1:6093969-6093988 | None:intergenic | 45.0% |
| CAACCCAAAAAGCTAGCTCA+TGG | - | chr4_1:6094023-6094042 | Msa0532060:intron | 45.0% | |
| !!! | CATCCCATGAGCTAGCTTTT+TGG | + | chr4_1:6094030-6094049 | None:intergenic | 45.0% |
| AGCTCATGGGATGACAAGTA+AGG | - | chr4_1:6094037-6094056 | Msa0532060:CDS | 45.0% | |
| CATCGAAGATATGGCCAAAG+TGG | + | chr4_1:6094084-6094103 | None:intergenic | 45.0% | |
| CTTTGGCCATATCTTCGATG+TGG | - | chr4_1:6094084-6094103 | Msa0532060:CDS | 45.0% | |
| TTGGCCATATCTTCGATGTG+GGG | - | chr4_1:6094086-6094105 | Msa0532060:CDS | 45.0% | |
| GAACAACTAGTTGCAGAGGT+TGG | - | chr4_1:6094305-6094324 | Msa0532060:intron | 45.0% | |
| AACTAGTTGCAGAGGTTGGA+AGG | - | chr4_1:6094309-6094328 | Msa0532060:intron | 45.0% | |
| !! | ACAGCGGGTTGGCTTAAAAT+AGG | - | chr4_1:6094332-6094351 | Msa0532060:intron | 45.0% |
| TGTGTCATGGCACAGTTGTA+AGG | - | chr4_1:6094401-6094420 | Msa0532060:CDS | 45.0% | |
| GTGTCATGGCACAGTTGTAA+GGG | - | chr4_1:6094402-6094421 | Msa0532060:CDS | 45.0% | |
| ATGGCACAGTTGTAAGGGTA+AGG | - | chr4_1:6094407-6094426 | Msa0532060:CDS | 45.0% | |
| TGGCACAGTTGTAAGGGTAA+GGG | - | chr4_1:6094408-6094427 | Msa0532060:CDS | 45.0% | |
| TACAAGTGGAAGAGCAGCTA+GGG | + | chr4_1:6094562-6094581 | None:intergenic | 45.0% | |
| CAGAACAAATGGAGCTTCTG+CGG | + | chr4_1:6094595-6094614 | None:intergenic | 45.0% | |
| ! | AGATACAGATGTGGTTCGGA+AGG | - | chr4_1:6094736-6094755 | Msa0532060:intron | 45.0% |
| AAGGCGATTATCGATGAAGC+AGG | - | chr4_1:6094755-6094774 | Msa0532060:intron | 45.0% | |
| AGTAATGCTCATGAAGCCTG+TGG | + | chr4_1:6094802-6094821 | None:intergenic | 45.0% | |
| GTCATCAGGGATATGCTTCA+AGG | + | chr4_1:6094849-6094868 | None:intergenic | 45.0% | |
| CAGACTCATTGACGTCATCA+GGG | + | chr4_1:6094862-6094881 | None:intergenic | 45.0% | |
| TCAGACTCATTGACGTCATC+AGG | + | chr4_1:6094863-6094882 | None:intergenic | 45.0% | |
| AGGCAAGTAAGGCAAAACAG+CGG | - | chr4_1:6095026-6095045 | Msa0532060:intron | 45.0% | |
| CAGCGGATACATCATACTAG+TGG | - | chr4_1:6095043-6095062 | Msa0532060:intron | 45.0% | |
| GAGTCTGCTAGAGAATTCTG+AGG | - | chr4_1:6095441-6095460 | Msa0532060:intron | 45.0% | |
| ! | GCTAGAGAATTCTGAGGATG+AGG | - | chr4_1:6095447-6095466 | Msa0532060:intron | 45.0% |
| ! | AGAGAATTCTGAGGATGAGG+TGG | - | chr4_1:6095450-6095469 | Msa0532060:intron | 45.0% |
| TGAGGATGAGGTGGAAGTAA+TGG | - | chr4_1:6095459-6095478 | Msa0532060:intron | 45.0% | |
| !!! | AGGGTTTTGGAGAAGGATTG+AGG | - | chr4_1:6095524-6095543 | Msa0532060:intron | 45.0% |
| AGGCTGAATTAGATGCCCAA+AGG | - | chr4_1:6095581-6095600 | Msa0532060:intron | 45.0% | |
| GGCTGAATTAGATGCCCAAA+GGG | - | chr4_1:6095582-6095601 | Msa0532060:intron | 45.0% | |
| TGAATTAGATGCCCAAAGGG+TGG | - | chr4_1:6095585-6095604 | Msa0532060:intron | 45.0% | |
| ! | TTGAGACAATGCTGACTGGA+TGG | + | chr4_1:6095770-6095789 | None:intergenic | 45.0% |
| TTATCACATCTTCCGCCTCA+TGG | + | chr4_1:6095956-6095975 | None:intergenic | 45.0% | |
| !!! | CGCTAGGAGCATCTATGTTT+TGG | - | chr4_1:6096140-6096159 | Msa0532060:five_prime_UTR | 45.0% |
| CCCTAATGTCACTAGTAGAC+TGG | - | chr4_1:6096204-6096223 | Msa0532060:five_prime_UTR | 45.0% | |
| !! | CTATAATATATTATAAATTA+TGG | + | chr4_1:6092588-6092607 | None:intergenic | 5.0% |
| !!! | TTCTTTTTTTTTTTTTTTTT+GGG | - | chr4_1:6094220-6094239 | Msa0532060:intron | 5.0% |
| !! | ACACAGTGCAAGTGTCGAAC+CGG | - | chr4_1:6088713-6088732 | Msa0532060:CDS | 50.0% |
| TCTTGGGTTTGTAGAGGAGC+AGG | - | chr4_1:6088773-6088792 | Msa0532060:intron | 50.0% | |
| CTTGGGTTTGTAGAGGAGCA+GGG | - | chr4_1:6088774-6088793 | Msa0532060:intron | 50.0% | |
| TTGGGTTTGTAGAGGAGCAG+GGG | - | chr4_1:6088775-6088794 | Msa0532060:intron | 50.0% | |
| ! | AGTGGCACTTAAGTACCGCT+TGG | + | chr4_1:6089205-6089224 | None:intergenic | 50.0% |
| ! | CGGTACTTAAGTGCCACTCA+GGG | - | chr4_1:6089207-6089226 | Msa0532060:CDS | 50.0% |
| AGCGTCAAGTCTTCAGCAGA+TGG | - | chr4_1:6089419-6089438 | Msa0532060:CDS | 50.0% | |
| ! | GCTTTCGTAGAGGAGCATGT+AGG | + | chr4_1:6090062-6090081 | None:intergenic | 50.0% |
| TTTGTAGAGGAGCAGGCAAC+AGG | - | chr4_1:6090989-6091008 | Msa0532060:intron | 50.0% | |
| GAGCAGGCAACAGGTACAAA+TGG | - | chr4_1:6090998-6091017 | Msa0532060:intron | 50.0% | |
| CCGGTAAGGTAGGAGTTAAC+AGG | + | chr4_1:6091043-6091062 | None:intergenic | 50.0% | |
| ! | GCTTTCATAGAGGAGCACGT+AGG | + | chr4_1:6091157-6091176 | None:intergenic | 50.0% |
| AGCGTCAAGTCTTCAGAAGC+AGG | - | chr4_1:6091272-6091291 | Msa0532060:intron | 50.0% | |
| TGATCCCGAGTTTGTAGAGG+AGG | - | chr4_1:6091356-6091375 | Msa0532060:intron | 50.0% | |
| GTCTCCTCCTCTACAAACTC+GGG | + | chr4_1:6091363-6091382 | None:intergenic | 50.0% | |
| GAGTTTGTAGAGGAGGAGAC+AGG | - | chr4_1:6091363-6091382 | Msa0532060:intron | 50.0% | |
| TCGCCTGTTCCACTTGATAC+TGG | - | chr4_1:6091411-6091430 | Msa0532060:CDS | 50.0% | |
| CGCCTGTTCCACTTGATACT+GGG | - | chr4_1:6091412-6091431 | Msa0532060:CDS | 50.0% | |
| GAGTAGGAGACACGTACACA+TGG | - | chr4_1:6091444-6091463 | Msa0532060:CDS | 50.0% | |
| AGTTGCTCCTGACGTTGTAG+AGG | - | chr4_1:6091799-6091818 | Msa0532060:CDS | 50.0% | |
| CTCAGGGGATGTAAGGTTGT+TGG | - | chr4_1:6092064-6092083 | Msa0532060:intron | 50.0% | |
| CAGGGGATGTAAGGTTGTTG+GGG | - | chr4_1:6092066-6092085 | Msa0532060:intron | 50.0% | |
| GGATGTAAGGTTGTTGGGGT+GGG | - | chr4_1:6092070-6092089 | Msa0532060:intron | 50.0% | |
| GATGTAAGGTTGTTGGGGTG+GGG | - | chr4_1:6092071-6092090 | Msa0532060:intron | 50.0% | |
| ATGTAAGGTTGTTGGGGTGG+GGG | - | chr4_1:6092072-6092091 | Msa0532060:intron | 50.0% | |
| TTGTTGGGGTGGGGGAATTA+TGG | - | chr4_1:6092080-6092099 | Msa0532060:intron | 50.0% | |
| AAAATCAGTGCCCGAGGGTA+AGG | - | chr4_1:6092303-6092322 | Msa0532060:intron | 50.0% | |
| GCCTCACATGCAGACACAAA+AGG | - | chr4_1:6092389-6092408 | Msa0532060:intron | 50.0% | |
| ! | GCCTTTTGTGTCTGCATGTG+AGG | + | chr4_1:6092393-6092412 | None:intergenic | 50.0% |
| CGCATTCTATAGCCACGTAG+TGG | + | chr4_1:6092676-6092695 | None:intergenic | 50.0% | |
| TATTCATCCTACGAGGCTGG+TGG | - | chr4_1:6093141-6093160 | Msa0532060:intron | 50.0% | |
| ! | AATCAGACGGCTTAGTGGGT+GGG | + | chr4_1:6093372-6093391 | None:intergenic | 50.0% |
| TAATCAGACGGCTTAGTGGG+TGG | + | chr4_1:6093373-6093392 | None:intergenic | 50.0% | |
| CTGATTATGTCCCCCAGTTG+AGG | - | chr4_1:6093386-6093405 | Msa0532060:CDS | 50.0% | |
| GATTATGTCCCCCAGTTGAG+GGG | - | chr4_1:6093388-6093407 | Msa0532060:CDS | 50.0% | |
| AATAGAGTCCCCTCAACTGG+GGG | + | chr4_1:6093399-6093418 | None:intergenic | 50.0% | |
| ! | GGTATGATGGAATGCCAGGA+TGG | + | chr4_1:6093965-6093984 | None:intergenic | 50.0% |
| GAGTCCCCACATCGAAGATA+TGG | + | chr4_1:6094093-6094112 | None:intergenic | 50.0% | |
| !! | GCGGGTTGGCTTAAAATAGG+AGG | - | chr4_1:6094335-6094354 | Msa0532060:intron | 50.0% |
| GGGTAAGGGAAAATCCTTGG+AGG | - | chr4_1:6094422-6094441 | Msa0532060:CDS | 50.0% | |
| GAAGAGAAGTCTCTCCTCCA+AGG | + | chr4_1:6094439-6094458 | None:intergenic | 50.0% | |
| GTACAAGTGGAAGAGCAGCT+AGG | + | chr4_1:6094563-6094582 | None:intergenic | 50.0% | |
| GCGGAGACACAAAGTACAAG+TGG | + | chr4_1:6094576-6094595 | None:intergenic | 50.0% | |
| CAGGCCGTTTATATCGGAGT+CGG | - | chr4_1:6094774-6094793 | Msa0532060:CDS | 50.0% | |
| ACAAAAAGGCCAATGGGGAG+TGG | - | chr4_1:6095247-6095266 | Msa0532060:CDS | 50.0% | |
| CAAAAAGGCCAATGGGGAGT+GGG | - | chr4_1:6095248-6095267 | Msa0532060:CDS | 50.0% | |
| CTCATTAACCCACTCCCCAT+TGG | + | chr4_1:6095259-6095278 | None:intergenic | 50.0% | |
| !! | CAATGGGGAGTGGGTTAATG+AGG | - | chr4_1:6095257-6095276 | Msa0532060:CDS | 50.0% |
| GGAAACTGCCTTTAAGTCGG+TGG | - | chr4_1:6095480-6095499 | Msa0532060:intron | 50.0% | |
| ACTGCCTTTAAGTCGGTGGT+TGG | - | chr4_1:6095484-6095503 | Msa0532060:intron | 50.0% | |
| CTGCCTTTAAGTCGGTGGTT+GGG | - | chr4_1:6095485-6095504 | Msa0532060:intron | 50.0% | |
| !! | CTTCCCAACCACCGACTTAA+AGG | + | chr4_1:6095491-6095510 | None:intergenic | 50.0% |
| ! | TGTTCGAGTTCAAGAGCTGC+AGG | - | chr4_1:6095561-6095580 | Msa0532060:intron | 50.0% |
| ATTAGATGCCCAAAGGGTGG+AGG | - | chr4_1:6095588-6095607 | Msa0532060:intron | 50.0% | |
| ATTCTCTGCCTCCACCCTTT+GGG | + | chr4_1:6095599-6095618 | None:intergenic | 50.0% | |
| GGACTCGACCTCAACAAGTT+TGG | + | chr4_1:6095650-6095669 | None:intergenic | 50.0% | |
| GCTTGAAGCACAACTCCATG+AGG | - | chr4_1:6095938-6095957 | Msa0532060:CDS | 50.0% | |
| TGAAGCACAACTCCATGAGG+CGG | - | chr4_1:6095941-6095960 | Msa0532060:CDS | 50.0% | |
| !! | AACTCTCGGAAGCATTCGCT+AGG | - | chr4_1:6096124-6096143 | Msa0532060:five_prime_UTR | 50.0% |
| TTTGTAGAGGAGCAGGGGAC+AGG | - | chr4_1:6088780-6088799 | Msa0532060:intron | 55.0% | |
| ! | AGTACCGCTTGGCTCTCCAA+CGG | + | chr4_1:6089194-6089213 | None:intergenic | 55.0% |
| ! | GCGGTACTTAAGTGCCACTC+AGG | - | chr4_1:6089206-6089225 | Msa0532060:CDS | 55.0% |
| !! | TCCTGAGTTGGTAGAGCAGC+AGG | - | chr4_1:6089506-6089525 | Msa0532060:intron | 55.0% |
| ACCTGCTGCTCTACCAACTC+AGG | + | chr4_1:6089510-6089529 | None:intergenic | 55.0% | |
| TTGGTAGAGCAGCAGGTGAC+AGG | - | chr4_1:6089513-6089532 | Msa0532060:intron | 55.0% | |
| ! | GCTTTCGTAGCGGAGCATGT+AGG | + | chr4_1:6089683-6089702 | None:intergenic | 55.0% |
| TCCTGAGCTTGTAGAGGAGC+AGG | - | chr4_1:6089885-6089904 | Msa0532060:CDS | 55.0% | |
| TCCTGCTCCTCTACAAGCTC+AGG | + | chr4_1:6089889-6089908 | None:intergenic | 55.0% | |
| CTTGTAGAGGAGCAGGAGAC+AGG | - | chr4_1:6089892-6089911 | Msa0532060:CDS | 55.0% | |
| GAGCAGGAGACAGGTACACA+TGG | - | chr4_1:6089901-6089920 | Msa0532060:CDS | 55.0% | |
| GCTTTCGTAGAGGAGCCTGT+AGG | + | chr4_1:6090417-6090436 | None:intergenic | 55.0% | |
| GAGGAGGAGACAGGTACACA+TGG | - | chr4_1:6091372-6091391 | Msa0532060:intron | 55.0% | |
| TCCTGACGTTGTAGAGGAGC+AGG | - | chr4_1:6091805-6091824 | Msa0532060:CDS | 55.0% | |
| TCCTGCTCCTCTACAACGTC+AGG | + | chr4_1:6091809-6091828 | None:intergenic | 55.0% | |
| TCCTGACTCTGTAGAGGAGC+AGG | - | chr4_1:6091856-6091875 | Msa0532060:intron | 55.0% | |
| TCCTGCTCCTCTACAGAGTC+AGG | + | chr4_1:6091860-6091879 | None:intergenic | 55.0% | |
| TCTGTAGAGGAGCAGGAGAC+AGG | - | chr4_1:6091863-6091882 | Msa0532060:intron | 55.0% | |
| GGGATGTAAGGTTGTTGGGG+TGG | - | chr4_1:6092069-6092088 | Msa0532060:intron | 55.0% | |
| ! | GCTTTAGTGGCCTTACCCTC+GGG | + | chr4_1:6092316-6092335 | None:intergenic | 55.0% |
| ! | GGCTTTAGTGGCCTTACCCT+CGG | + | chr4_1:6092317-6092336 | None:intergenic | 55.0% |
| GCCACTAAAGCCCTCGCTTT+AGG | - | chr4_1:6092325-6092344 | Msa0532060:intron | 55.0% | |
| ! | GCCTAAAGCGAGGGCTTTAG+TGG | + | chr4_1:6092329-6092348 | None:intergenic | 55.0% |
| TTGGTCCGGCCCTGTATGAA+AGG | - | chr4_1:6092460-6092479 | Msa0532060:intron | 55.0% | |
| ! | CCACGTAGTGGGATAAGGCT+TGG | + | chr4_1:6092664-6092683 | None:intergenic | 55.0% |
| ! | CCAAGCCTTATCCCACTACG+TGG | - | chr4_1:6092661-6092680 | Msa0532060:intron | 55.0% |
| ! | ATCAGACGGCTTAGTGGGTG+GGG | + | chr4_1:6093371-6093390 | None:intergenic | 55.0% |
| GCTATGCGACTACGTTGGTG+TGG | + | chr4_1:6093480-6093499 | None:intergenic | 55.0% | |
| GTGGAGCTATGCGACTACGT+TGG | + | chr4_1:6093485-6093504 | None:intergenic | 55.0% | |
| ACGCCTACCACTGGACCTTT+GGG | + | chr4_1:6093915-6093934 | None:intergenic | 55.0% | |
| GTAGGCGTGAGGGGATTTGT+TGG | - | chr4_1:6093927-6093946 | Msa0532060:intron | 55.0% | |
| GAATGCCAGGATGGCAGCAA+CGG | + | chr4_1:6093956-6093975 | None:intergenic | 55.0% | |
| TGCAGAGGTTGGAAGGACAG+CGG | - | chr4_1:6094316-6094335 | Msa0532060:intron | 55.0% | |
| !! | GGCGCCGACTCCGATATAAA+CGG | + | chr4_1:6094781-6094800 | None:intergenic | 55.0% |
| CAGGCTCCTTTCCAGTCACA+GGG | + | chr4_1:6095200-6095219 | None:intergenic | 55.0% | |
| TCAGGCTCCTTTCCAGTCAC+AGG | + | chr4_1:6095201-6095220 | None:intergenic | 55.0% | |
| CATTCTCTGCCTCCACCCTT+TGG | + | chr4_1:6095600-6095619 | None:intergenic | 55.0% | |
| TGTTGAGGTCGAGTCCCAAC+TGG | - | chr4_1:6095654-6095673 | Msa0532060:intron | 55.0% | |
| ACGGAAACGAGAGGAGAGTG+AGG | - | chr4_1:6095687-6095706 | Msa0532060:intron | 55.0% | |
| ACTGCCGTTGGAGAGCCAAG+CGG | - | chr4_1:6089187-6089206 | Msa0532060:CDS | 60.0% | |
| ! | GCTTTCGTAGAGGCGCACGT+AGG | + | chr4_1:6089304-6089323 | None:intergenic | 60.0% |
| CAGCAGGTGACAGGTGCACA+TGG | - | chr4_1:6089522-6089541 | Msa0532060:intron | 60.0% | |
| ! | AGCCCTCGCTTTAGGCCTAC+CGG | - | chr4_1:6092333-6092352 | Msa0532060:intron | 60.0% |
| TGCCGGTAGGCCTAAAGCGA+GGG | + | chr4_1:6092338-6092357 | None:intergenic | 60.0% | |
| TTGCCGGTAGGCCTAAAGCG+AGG | + | chr4_1:6092339-6092358 | None:intergenic | 60.0% | |
| ATTGACCCTCTTGGTCGCCC+TGG | + | chr4_1:6092894-6092913 | None:intergenic | 60.0% | |
| TCCATGCCCCAAAGGTCCAG+TGG | - | chr4_1:6093905-6093924 | Msa0532060:intron | 60.0% | |
| !! | ACCACTGGACCTTTGGGGCA+TGG | + | chr4_1:6093909-6093928 | None:intergenic | 60.0% |
| TGCCCCAAAGGTCCAGTGGT+AGG | - | chr4_1:6093909-6093928 | Msa0532060:intron | 60.0% | |
| CGCCTACCACTGGACCTTTG+GGG | + | chr4_1:6093914-6093933 | None:intergenic | 60.0% | |
| CACGCCTACCACTGGACCTT+TGG | + | chr4_1:6093916-6093935 | None:intergenic | 60.0% | |
| AAGGTCCAGTGGTAGGCGTG+AGG | - | chr4_1:6093916-6093935 | Msa0532060:intron | 60.0% | |
| AGGTCCAGTGGTAGGCGTGA+GGG | - | chr4_1:6093917-6093936 | Msa0532060:intron | 60.0% | |
| AATCCCCTCACGCCTACCAC+TGG | + | chr4_1:6093924-6093943 | None:intergenic | 60.0% | |
| GGGACTCAGCGTAACCCCTA+TGG | - | chr4_1:6094106-6094125 | Msa0532060:CDS | 60.0% | |
| GCAGAGGTTGGAAGGACAGC+GGG | - | chr4_1:6094317-6094336 | Msa0532060:intron | 60.0% | |
| AGGTTGGAAGGACAGCGGGT+TGG | - | chr4_1:6094321-6094340 | Msa0532060:intron | 60.0% | |
| TATATCGGAGTCGGCGCCAC+AGG | - | chr4_1:6094783-6094802 | Msa0532060:CDS | 60.0% | |
| TAACAGCGGGACCCTGTGAC+TGG | - | chr4_1:6095186-6095205 | Msa0532060:CDS | 60.0% | |
| GGGTGGAGGCAGAGAATGCT+AGG | - | chr4_1:6095602-6095621 | Msa0532060:intron | 60.0% | |
| AGAGGAGCGACGGAAACGAG+AGG | - | chr4_1:6095678-6095697 | Msa0532060:intron | 60.0% | |
| CCTACAGCCACCAGCCTCGT+AGG | + | chr4_1:6093151-6093170 | None:intergenic | 65.0% | |
| CCTACGAGGCTGGTGGCTGT+AGG | - | chr4_1:6093148-6093167 | Msa0532060:intron | 65.0% | |
| AGGCTGGTGGCTGTAGGTCC+AGG | - | chr4_1:6093154-6093173 | Msa0532060:intron | 65.0% | |
| GGTCCAGTGGTAGGCGTGAG+GGG | - | chr4_1:6093918-6093937 | Msa0532060:intron | 65.0% | |
| GGAGACCGTTGCTGCCATCC+TGG | - | chr4_1:6093948-6093967 | Msa0532060:intron | 65.0% | |
| GCGGGACCCTGTGACTGGAA+AGG | - | chr4_1:6095191-6095210 | Msa0532060:CDS | 65.0% | |
| GGTCGAGTCCCAACTGGCAG+AGG | - | chr4_1:6095660-6095679 | Msa0532060:intron | 65.0% | |
| CCGTCGCTCCTCTGCCAGTT+GGG | + | chr4_1:6095671-6095690 | None:intergenic | 65.0% | |
| CCCAACTGGCAGAGGAGCGA+CGG | - | chr4_1:6095668-6095687 | Msa0532060:intron | 65.0% | |
| TCCGTCGCTCCTCTGCCAGT+TGG | + | chr4_1:6095672-6095691 | None:intergenic | 65.0% | |
| AGGGGACCAGGGCGACCAAG+AGG | - | chr4_1:6092885-6092904 | Msa0532060:CDS | 70.0% | |
| GGGGACCAGGGCGACCAAGA+GGG | - | chr4_1:6092886-6092905 | Msa0532060:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 6088356 | 6096322 | 6088356 | ID=Msa0532060;Name=Msa0532060 |
| chr4_1 | mRNA | 6088356 | 6096322 | 6088356 | ID=Msa0532060-mRNA-1;Parent=Msa0532060;Name=Msa0532060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=298|0.78|0.86|1|1|1|15|306|899 |
| chr4_1 | exon | 6088356 | 6088787 | 6088356 | ID=Msa0532060-mRNA-1:exon:2196;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6088877 | 6089263 | 6088877 | ID=Msa0532060-mRNA-1:exon:2195;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6089382 | 6089486 | 6089382 | ID=Msa0532060-mRNA-1:exon:2194;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6089579 | 6089671 | 6089579 | ID=Msa0532060-mRNA-1:exon:2193;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6089753 | 6089959 | 6089753 | ID=Msa0532060-mRNA-1:exon:2192;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6090070 | 6090126 | 6090070 | ID=Msa0532060-mRNA-1:exon:2191;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6091384 | 6091841 | 6091384 | ID=Msa0532060-mRNA-1:exon:2190;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6092794 | 6092997 | 6092794 | ID=Msa0532060-mRNA-1:exon:2189;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6093294 | 6093443 | 6093294 | ID=Msa0532060-mRNA-1:exon:2188;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6093668 | 6093820 | 6093668 | ID=Msa0532060-mRNA-1:exon:2187;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6094036 | 6094188 | 6094036 | ID=Msa0532060-mRNA-1:exon:2186;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6094389 | 6094541 | 6094389 | ID=Msa0532060-mRNA-1:exon:2185;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6094765 | 6094917 | 6094765 | ID=Msa0532060-mRNA-1:exon:2184;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6095144 | 6095296 | 6095144 | ID=Msa0532060-mRNA-1:exon:2183;Parent=Msa0532060-mRNA-1 |
| chr4_1 | exon | 6095877 | 6096322 | 6095877 | ID=Msa0532060-mRNA-1:exon:2182;Parent=Msa0532060-mRNA-1 |
| chr4_1 | five_prime_UTR | 6096025 | 6096322 | 6096025 | ID=Msa0532060-mRNA-1:five_prime_utr;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6095877 | 6096024 | 6095877 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6095144 | 6095296 | 6095144 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6094765 | 6094917 | 6094765 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6094389 | 6094541 | 6094389 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6094036 | 6094188 | 6094036 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6093668 | 6093820 | 6093668 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6093294 | 6093443 | 6093294 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6092794 | 6092997 | 6092794 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6091384 | 6091841 | 6091384 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6090070 | 6090126 | 6090070 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6089753 | 6089959 | 6089753 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6089579 | 6089671 | 6089579 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6089382 | 6089486 | 6089382 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6088877 | 6089263 | 6088877 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | CDS | 6088662 | 6088787 | 6088662 | ID=Msa0532060-mRNA-1:cds;Parent=Msa0532060-mRNA-1 |
| chr4_1 | three_prime_UTR | 6088356 | 6088661 | 6088356 | ID=Msa0532060-mRNA-1:three_prime_utr;Parent=Msa0532060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
