AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1398340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398340 MtrunA17_Chr3g0115391 96.817 1979 61 1 1 1979 1 1977 0.0 3861
Msa1398340 MtrunA17_Chr5g0397721 44.056 143 80 0 1 143 1 143 2.38e-39 160
Msa1398340 MtrunA17_Chr8g0386571 30.521 403 221 9 6 384 3 370 9.82e-39 158
Msa1398340 MtrunA17_Chr1g0203361 27.865 384 213 9 7 384 5 330 2.14e-38 156
Msa1398340 MtrunA17_Chr1g0203361 56.364 55 24 0 1908 1962 797 851 9.90e-11 67.4
Msa1398340 MtrunA17_Chr1g0179821 35.099 151 96 2 1 150 1 150 1.56e-25 115
Msa1398340 MtrunA17_Chr1g0197491 36.220 127 77 4 22 147 47 170 6.49e-16 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398340 AT1G22060.2 44.131 2053 990 36 1 1964 1 1985 0.0 1441
Msa1398340 AT1G22060.1 44.131 2053 990 36 1 1964 1 1985 0.0 1441
Msa1398340 AT5G41140.1 46.429 140 73 2 1 138 1 140 2.46e-36 151
Msa1398340 AT5G41140.2 46.429 140 73 2 1 138 1 140 2.55e-36 150
Msa1398340 AT1G63300.1 43.885 139 77 1 1 138 1 139 2.44e-35 148
Msa1398340 AT1G63300.1 27.949 390 227 12 1586 1962 679 1027 1.04e-13 77.4
Msa1398340 AT5G52280.1 31.621 253 152 4 7 246 5 249 9.37e-34 142

Find 330 sgRNAs with CRISPR-Local

Find 679 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAACCTCTACTTCAATTT+TGG 0.118980 tig0022248:-55540 None:intergenic
TTAAATTTGCCTCTAAAATT+TGG 0.129734 tig0022248:-52934 None:intergenic
TTATCTGCTCATTCATATTT+TGG 0.147127 tig0022248:-52247 None:intergenic
CTGCAGAAGCAGCCCTTAAA+AGG 0.164880 tig0022248:+52336 Msa1398340:CDS
CGGAGAATTTGGAGCCATTT+TGG 0.168227 tig0022248:-58260 None:intergenic
ACGTCTTGAAGATGCTTTAA+AGG 0.191930 tig0022248:+54404 Msa1398340:CDS
CTTAATCAAGCATGGATTAT+TGG 0.192215 tig0022248:-58353 None:intergenic
TTCATAATTTACAGTTTAAA+TGG 0.194292 tig0022248:+51664 Msa1398340:CDS
TTAGTACAATTCACTAGTTC+TGG 0.227614 tig0022248:-52506 None:intergenic
CAAAATCATTCTGATGAAAT+TGG 0.232300 tig0022248:+51450 Msa1398340:CDS
CTTGACTAAGATCCTGATTT+CGG 0.233390 tig0022248:-53672 None:intergenic
ATCTTCTTCTATTAGTTATC+TGG 0.233647 tig0022248:+54428 Msa1398340:CDS
CTGAAGTAGGTCGGAGAATT+TGG 0.234689 tig0022248:-58271 None:intergenic
TGCGCGATGAAAAGAATTTC+AGG 0.235805 tig0022248:+53875 Msa1398340:CDS
GGGTTCTGAGTAGTTTCTTT+TGG 0.239454 tig0022248:+46952 Msa1398340:five_prime_UTR
GAATCTAGCGATCCAATTTC+AGG 0.240103 tig0022248:+51822 Msa1398340:CDS
TATATAGATTATGTTATATA+AGG 0.241586 tig0022248:+58435 Msa1398340:three_prime_UTR
AGAAAATATTCGAACTTCTA+AGG 0.243989 tig0022248:+52027 Msa1398340:CDS
TAATGTGATTATTAACATTC+TGG 0.244279 tig0022248:-50811 None:intergenic
TTCTGAAGATAGGCGCATTT+TGG 0.245959 tig0022248:+52277 Msa1398340:CDS
GAATGATATCCTCTCGTTAA+AGG 0.252669 tig0022248:+52862 Msa1398340:CDS
ACAACTTTAGTCCCTGAAAT+TGG 0.252818 tig0022248:-51834 None:intergenic
TGTAGCAGTAGCAGTCTTAA+AGG 0.253214 tig0022248:+51369 Msa1398340:CDS
GAAGAATGTACCTCTGAAAT+TGG 0.257804 tig0022248:-57198 None:intergenic
AAATGCTTATGACCTGTTAA+AGG 0.259151 tig0022248:+55424 Msa1398340:CDS
GGAATTGGAGGCTGAGTTAC+AGG 0.259330 tig0022248:+55373 Msa1398340:CDS
AAATGGAATTTGAAGAGATT+TGG 0.260019 tig0022248:-47053 None:intergenic
CCAATGAGTCACTGGTTCTT+AGG 0.263165 tig0022248:+52825 Msa1398340:CDS
ATTTGAAGAGATTTGGAAAA+TGG 0.264601 tig0022248:-47046 None:intergenic
TTCCTTTCATAGACAACATT+TGG 0.266977 tig0022248:+52580 Msa1398340:CDS
AAAATGGGACCTTCAAGTTT+TGG 0.268824 tig0022248:+47645 Msa1398340:five_prime_UTR
TTGACTAAGATCCTGATTTC+GGG 0.269466 tig0022248:-53671 None:intergenic
AAGAACCTAAAATCCCTTTC+AGG 0.282665 tig0022248:-51750 None:intergenic
AAGCAGTATTCAGAAGTTTC+AGG 0.283820 tig0022248:+58068 Msa1398340:CDS
AGAAGGCTTTGTACGGAAAA+TGG 0.284210 tig0022248:+52076 Msa1398340:CDS
AAAGCCTTCTCTTTCAGTTT+TGG 0.284332 tig0022248:-52063 None:intergenic
TGTTAATAATCACATTAATA+AGG 0.284656 tig0022248:+50817 Msa1398340:CDS
CAGCTTCTCACTTCCAAAAC+TGG 0.285362 tig0022248:+50601 Msa1398340:CDS
CCTCTTCAGTTCCCAGAGTT+TGG 0.289302 tig0022248:-56584 None:intergenic
GACTCAGCTGCTGGATTTGA+TGG 0.303288 tig0022248:+51114 Msa1398340:CDS
TTGTAGTAGTTCTGCTTGTT+TGG 0.309497 tig0022248:+53276 Msa1398340:CDS
AGATAACGAGCCATGCTTTC+GGG 0.309608 tig0022248:-51942 None:intergenic
AGATATTCAGAAAGTATCTA+TGG 0.310607 tig0022248:+51722 Msa1398340:CDS
TTTGACTTTGGCTTCTTCAT+TGG 0.312444 tig0022248:-54901 None:intergenic
AGCACAGTGTCTGGTGATTT+AGG 0.319675 tig0022248:+51204 Msa1398340:CDS
TGAAGCCAGTCTTAACATTC+AGG 0.322615 tig0022248:+52748 Msa1398340:CDS
TCCTACTCTTGTGTTCCTTA+AGG 0.323172 tig0022248:-54764 None:intergenic
TCCATTTCTCACATTTGCTT+TGG 0.325285 tig0022248:-49601 None:intergenic
TTTGGAAATTAATGTATGTT+AGG 0.327005 tig0022248:+47663 Msa1398340:five_prime_UTR
TACCATGAGGCTTTCTGAAC+AGG 0.327628 tig0022248:+55028 Msa1398340:CDS
TTGGATGCTAGACTTCTTCC+TGG 0.330612 tig0022248:-57179 None:intergenic
CTATTCAGCTGCAAATAAAT+TGG 0.330641 tig0022248:+51329 Msa1398340:CDS
GAGGCAAATTTAAAAGATCT+TGG 0.346365 tig0022248:+52944 Msa1398340:CDS
AATGTACCTAAAACCAGTTT+TGG 0.346600 tig0022248:-50614 None:intergenic
AGTCTTGTAGTTTCATAGAT+TGG 0.349959 tig0022248:-49642 None:intergenic
TTGCCTCTAAAATTTGGTTC+TGG 0.351436 tig0022248:-52928 None:intergenic
TATAGTTCTCCAGGGAAAAC+TGG 0.355210 tig0022248:+54926 Msa1398340:CDS
GTTGGAGCTGAGGATGAAAA+TGG 0.361462 tig0022248:+47629 Msa1398340:five_prime_UTR
TGAAATTAGGTCCATTCAAA+AGG 0.361578 tig0022248:+51012 Msa1398340:intron
CTTGTCATGAAACAGAAGTT+TGG 0.362017 tig0022248:+53457 Msa1398340:CDS
TTTACAGTTTAAATGGCATA+AGG 0.366049 tig0022248:+51671 Msa1398340:CDS
AGGATTGAATTTGCACTCTC+TGG 0.368256 tig0022248:-55686 None:intergenic
GATCAGGCCAATCAAGAGTT+AGG 0.371338 tig0022248:+57061 Msa1398340:intron
TAGCATTGAGCACCTGAATA+AGG 0.372993 tig0022248:+56662 Msa1398340:CDS
TAACTCTTGATATAGCTGAT+AGG 0.376174 tig0022248:-58461 None:intergenic
TTACAGTTTAAATGGCATAA+GGG 0.382590 tig0022248:+51672 Msa1398340:CDS
GCTGTTGCTTTGCCTCTTAA+CGG 0.383729 tig0022248:+50320 Msa1398340:CDS
GAGATAACGAGCCATGCTTT+CGG 0.383823 tig0022248:-51943 None:intergenic
TACAGAGGAGAAGAAAGCTT+TGG 0.392239 tig0022248:+53759 Msa1398340:CDS
GCAACTGAATTCCCGAAATC+AGG 0.394944 tig0022248:+53660 Msa1398340:CDS
CATGCTTCCTAACTCTTGAT+TGG 0.395198 tig0022248:-57068 None:intergenic
CAGTTCTTGTCTGTTCATAT+CGG 0.399307 tig0022248:-54304 None:intergenic
CATTAATTTCCAAAACTTGA+AGG 0.401101 tig0022248:-47654 None:intergenic
TTGTCATGAAACAGAAGTTT+GGG 0.401598 tig0022248:+53458 Msa1398340:CDS
ACTAAGCTAACTGTAATTTA+CGG 0.402260 tig0022248:-47606 None:intergenic
TTTGAAGAGATTTGGAAAAT+GGG 0.404495 tig0022248:-47045 None:intergenic
TGCAAGGCTGGAGCAATTGC+TGG 0.406540 tig0022248:+54842 Msa1398340:CDS
ACCAAAGCAAATGTGAGAAA+TGG 0.406973 tig0022248:+49600 Msa1398340:CDS
CAGAACTAAATTTGATGTGC+TGG 0.407090 tig0022248:+53153 Msa1398340:CDS
TCTTTCATCCCAGCTGACTC+TGG 0.407892 tig0022248:+49558 Msa1398340:CDS
TTGCTGAAGCATTGCAAGCC+AGG 0.408432 tig0022248:+57161 Msa1398340:CDS
ATATAGATTATGTTATATAA+GGG 0.408647 tig0022248:+58436 Msa1398340:three_prime_UTR
GGGAATGAAGATCTTGGAAT+TGG 0.409774 tig0022248:+55358 Msa1398340:CDS
TCTTGAACTTCTTTCTTGCC+AGG 0.415122 tig0022248:+52403 Msa1398340:CDS
TAGTACAATTCACTAGTTCT+GGG 0.417739 tig0022248:-52505 None:intergenic
ATTCAAAAGGGAAATTGAAA+AGG 0.418804 tig0022248:+51025 Msa1398340:CDS
GAATTTGTCTACTCATTTGA+AGG 0.419500 tig0022248:+55073 Msa1398340:CDS
CTGACTCAAGTTTCTGCAAC+TGG 0.420464 tig0022248:-53525 None:intergenic
ATTAATCTCAGATGAAATCT+TGG 0.420944 tig0022248:-53815 None:intergenic
GAATACTCGAGCATCCAAAA+TGG 0.422813 tig0022248:+58246 Msa1398340:CDS
CCTCTTAACGGAAGTGAGCC+TGG 0.422879 tig0022248:+50332 Msa1398340:CDS
ATTAGAAAGGGTGCTTGCTT+TGG 0.424943 tig0022248:+57129 Msa1398340:CDS
GGTGCCCTAGTGCGGGGATA+AGG 0.426421 tig0022248:-58302 None:intergenic
TCAATTAAGCCTTCAGTTCG+CGG 0.427124 tig0022248:+58183 Msa1398340:CDS
TTTCTTGCTTGCAACATTCA+AGG 0.427481 tig0022248:-55472 None:intergenic
CTGGAAAGTGTCAGCAGAGA+TGG 0.431057 tig0022248:+54861 Msa1398340:CDS
TTCTTGAGCATTTAATAAAG+AGG 0.433551 tig0022248:-55630 None:intergenic
TAGTCAAGAAATTATAAAGC+TGG 0.440884 tig0022248:+53687 Msa1398340:CDS
GTCAGTTCTCTTTGCAGACC+TGG 0.441745 tig0022248:-56954 None:intergenic
AATAAAAGTAAATGAAGAGC+TGG 0.442603 tig0022248:+55337 Msa1398340:CDS
CCTAAGAACCAGTGACTCAT+TGG 0.442948 tig0022248:-52825 None:intergenic
AGAGCTGGGAATGAAGATCT+TGG 0.443285 tig0022248:+55352 Msa1398340:CDS
TACTTCTATAATCTGTCAAA+AGG 0.443583 tig0022248:-53012 None:intergenic
CTCCTTTAGTTCTGTCTCCA+TGG 0.443636 tig0022248:-58143 None:intergenic
AGTCAAATGTATAGTTCTCC+AGG 0.447255 tig0022248:+54917 Msa1398340:CDS
AACTCTTGATATAGCTGATA+GGG 0.447262 tig0022248:-58460 None:intergenic
GCAAGAGGGGTTATACAAAC+AGG 0.448418 tig0022248:+52646 Msa1398340:CDS
CAAAGTCCTCAGCGAGAGAA+AGG 0.449526 tig0022248:+51243 Msa1398340:CDS
ACTGCTACTGCTACAGTCTT+CGG 0.449630 tig0022248:-51361 None:intergenic
CGATATGAACAGACAAGAAC+TGG 0.449895 tig0022248:+54305 Msa1398340:CDS
TGCGAAGATGGAGTTACAAA+TGG 0.450901 tig0022248:+51872 Msa1398340:CDS
GAGAACTATACATTTGACTT+TGG 0.451719 tig0022248:-54913 None:intergenic
TGAGCTTGAGGTTGCAAGGC+TGG 0.453023 tig0022248:+54830 Msa1398340:CDS
GGTCTCTAGATTCCACAATC+TGG 0.453832 tig0022248:+49516 Msa1398340:intron
AATCAGATAATGAGTTGATA+AGG 0.454672 tig0022248:+54982 Msa1398340:CDS
TACGAATGGATGCCAAACTC+TGG 0.454679 tig0022248:+56572 Msa1398340:CDS
AGATCCCACCCTTGCTATGA+AGG 0.454736 tig0022248:+52004 Msa1398340:CDS
TTACCTCTGGCTGCATATTG+AGG 0.455671 tig0022248:-55706 None:intergenic
CTCCTCTGTAATTGCTGCTA+AGG 0.455840 tig0022248:-53746 None:intergenic
ATGGATCGAGTAGAAAGAAA+TGG 0.457875 tig0022248:-47070 None:intergenic
TCAAACTTTGAGCTAAAGCC+AGG 0.457883 tig0022248:-56635 None:intergenic
AGTCTTAAAAGCACAGTGTC+TGG 0.459101 tig0022248:+51195 Msa1398340:CDS
TGCATATATGCAATTTCTGC+TGG 0.459105 tig0022248:+52200 Msa1398340:CDS
TGACCTGTTAAAGGCTGAAA+AGG 0.459813 tig0022248:+55433 Msa1398340:CDS
TGACTACTTAAAATCTGAGT+TGG 0.460204 tig0022248:+54683 Msa1398340:CDS
TCCTTTCATAGACAACATTT+GGG 0.460769 tig0022248:+52581 Msa1398340:CDS
AGCTTTGGAGTTGTCTCTCC+AGG 0.461208 tig0022248:+53774 Msa1398340:CDS
TTCTGCTGGTAAGAACGAAA+TGG 0.461357 tig0022248:+52214 Msa1398340:CDS
TGTGGCAACATCAGACCTTA+AGG 0.462236 tig0022248:+54749 Msa1398340:CDS
CCAGGCTCACTTCCGTTAAG+AGG 0.463458 tig0022248:-50332 None:intergenic
ATCTATGGGATTACCTGAAA+GGG 0.463662 tig0022248:+51737 Msa1398340:CDS
TGTGGTGGAAACTGATTGTC+AGG 0.463680 tig0022248:-51273 None:intergenic
TCTGAGAATTGCATTTATCA+AGG 0.465435 tig0022248:+55181 Msa1398340:CDS
AACTCATGAGCCACAAGGCC+AGG 0.467284 tig0022248:-51972 None:intergenic
TTCCACCACAGGACAATGCT+TGG 0.467803 tig0022248:+51286 Msa1398340:CDS
CTACTTAAAATCTGAGTTGG+AGG 0.468304 tig0022248:+54686 Msa1398340:CDS
CAAGCAACTGGTGACAGACT+TGG 0.473421 tig0022248:+54335 Msa1398340:CDS
CATGTGTAGCATGGAATTGA+AGG 0.473685 tig0022248:-47763 None:intergenic
AAAGTTTACAAACTTGTTGT+GGG 0.473879 tig0022248:+49699 Msa1398340:CDS
GAAAGTTTACAAACTTGTTG+TGG 0.473944 tig0022248:+49698 Msa1398340:CDS
TATTAAAACAAGACAATATG+AGG 0.476752 tig0022248:+49674 Msa1398340:CDS
GTGAAGAATCAGAAAGGGTC+TGG 0.477459 tig0022248:-52463 None:intergenic
AGCAGTATTCAGAAGTTTCA+GGG 0.477610 tig0022248:+58069 Msa1398340:CDS
CCATTCCTTATCCCCGCACT+AGG 0.478105 tig0022248:+58297 Msa1398340:CDS
ACTGGTCCATCTCAAGCAAC+TGG 0.478257 tig0022248:+54323 Msa1398340:CDS
CGGAAGAGAAAATGCGAAGA+TGG 0.479460 tig0022248:+51860 Msa1398340:CDS
CTTCAGTTCGCGGAAGTTGA+AGG 0.479720 tig0022248:+58193 Msa1398340:CDS
CTGCTACAGTCTTCGGAAGC+AGG 0.479959 tig0022248:-51354 None:intergenic
AAACAACTTGTCTTCTCTAC+AGG 0.482208 tig0022248:+53846 Msa1398340:CDS
CTGTACCAGAGCTCAGTTTG+AGG 0.482262 tig0022248:+54506 Msa1398340:CDS
CTTGTTGAAAAGATGAGTGC+TGG 0.482367 tig0022248:+53559 Msa1398340:CDS
TAATAAGTTGCAGAAATTAG+TGG 0.483743 tig0022248:+53219 Msa1398340:CDS
CAGGACAATGCTTGGGCACA+TGG 0.483859 tig0022248:+51294 Msa1398340:CDS
CCTCTCGTTAAAGGAGTACA+AGG 0.489406 tig0022248:+52871 Msa1398340:CDS
TCTTAATTCTTAATCAAGCA+TGG 0.490370 tig0022248:-58361 None:intergenic
ACTTTAAGATAGAGAATCAA+TGG 0.490539 tig0022248:-47089 None:intergenic
TGATTATTAACATTCTGGTC+AGG 0.490727 tig0022248:-50806 None:intergenic
TCCACCACAGGACAATGCTT+GGG 0.490769 tig0022248:+51287 Msa1398340:CDS
TTACAAACTTGTTGTGGGGA+TGG 0.493629 tig0022248:+49704 Msa1398340:CDS
AAATCAATCCAATGAGTCAC+TGG 0.494627 tig0022248:+52817 Msa1398340:CDS
TTTAGTTTGCCACCTTGCAC+AGG 0.494865 tig0022248:+58330 Msa1398340:three_prime_UTR
GTAACCTTCCCAGAGTCAGC+TGG 0.495398 tig0022248:-49567 None:intergenic
TCTTCAAGATCTAGCATCCT+TGG 0.496067 tig0022248:+50248 Msa1398340:CDS
AATTACAGTTAGCTTAGTGT+TGG 0.497502 tig0022248:+47611 Msa1398340:five_prime_UTR
AGGACCACCGGTCGCTATGC+AGG 0.497936 tig0022248:+55154 Msa1398340:CDS
TTCTCTGTTTGCAGTTGGAA+AGG 0.499779 tig0022248:+56874 Msa1398340:intron
ATTTCAACTCTCTAGGCAGC+TGG 0.500743 tig0022248:+52787 Msa1398340:CDS
GATTGAGAAAACTAAAGTTA+AGG 0.501725 tig0022248:+47730 Msa1398340:CDS
GATTATGCTGACTCAGCTGC+TGG 0.502092 tig0022248:+51105 Msa1398340:CDS
TAAAGTGAATGTTCTGAATG+AGG 0.503037 tig0022248:+55595 Msa1398340:CDS
TTCAAAAGGGAAATTGAAAA+GGG 0.504660 tig0022248:+51026 Msa1398340:CDS
GAAATTAGGTCCATTCAAAA+GGG 0.505858 tig0022248:+51013 Msa1398340:intron
AAGAGATTTGGAAAATGGGT+GGG 0.506295 tig0022248:-47041 None:intergenic
TATTATTTCTTTCTGCAAAG+TGG 0.506980 tig0022248:-53125 None:intergenic
TTCCATGGAGACAGAACTAA+AGG 0.507603 tig0022248:+58141 Msa1398340:CDS
AGGAGAAGAGCTAGCAAAAG+AGG 0.508385 tig0022248:+51521 Msa1398340:CDS
TGGGCATGATTTACAGCAGA+TGG 0.508877 tig0022248:+53477 Msa1398340:CDS
CTTCAACTTCCGCGAACTGA+AGG 0.508892 tig0022248:-58192 None:intergenic
AATCTAGCGATCCAATTTCA+GGG 0.510512 tig0022248:+51823 Msa1398340:CDS
TCTTACTCATAAAATTAATG+AGG 0.511404 tig0022248:+52982 Msa1398340:CDS
AATTATAAAGCTGGGTACTT+CGG 0.511730 tig0022248:+53696 Msa1398340:CDS
TGAGAAAACTAAAGTTAAGG+TGG 0.513271 tig0022248:+47733 Msa1398340:CDS
TGGATATTTCATCATGAAGA+TGG 0.514716 tig0022248:-53105 None:intergenic
ATATATTTACAAAATGCATC+TGG 0.515525 tig0022248:-52685 None:intergenic
AGTTTATCCCATCCAGATTG+TGG 0.515836 tig0022248:-49528 None:intergenic
TACAGTTTAAATGGCATAAG+GGG 0.517234 tig0022248:+51673 Msa1398340:CDS
ACAATGCTTGGGCACATGGT+TGG 0.518960 tig0022248:+51298 Msa1398340:CDS
ATTGCTGCTGAGATATCATC+AGG 0.520128 tig0022248:+51501 Msa1398340:CDS
TCAGTGGCAATGCATTAGAA+AGG 0.520779 tig0022248:+57116 Msa1398340:CDS
TTCTCCTTCATAGCAAGGGT+GGG 0.522952 tig0022248:-52008 None:intergenic
TAATGTCTAGAGTTACCAAA+TGG 0.524122 tig0022248:+47705 Msa1398340:exon
TTCTTGCTTGCAACATTCAA+GGG 0.524750 tig0022248:-55471 None:intergenic
TATCTATGGGATTACCTGAA+AGG 0.525221 tig0022248:+51736 Msa1398340:CDS
TGGAAAGTGTCAGCAGAGAT+GGG 0.525309 tig0022248:+54862 Msa1398340:CDS
TGTGGCCTGAATGTTAAGAC+TGG 0.526859 tig0022248:-52753 None:intergenic
TACTCATAAAATTAATGAGG+TGG 0.527249 tig0022248:+52985 Msa1398340:CDS
TTCTAGAGAATTGAATTGCA+TGG 0.529381 tig0022248:+54632 Msa1398340:CDS
CTTTCATCCCAGCTGACTCT+GGG 0.530270 tig0022248:+49559 Msa1398340:CDS
TCTTCACTCTCAAACACTGA+TGG 0.530801 tig0022248:+52479 Msa1398340:CDS
CTCACATGTAGTGTGACTCC+AGG 0.532505 tig0022248:-50350 None:intergenic
AAGATGGAGTTACAAATGGA+TGG 0.533782 tig0022248:+51876 Msa1398340:CDS
AGTCAAGAAATTATAAAGCT+GGG 0.534621 tig0022248:+53688 Msa1398340:CDS
CTTCACTCGAAGGAGAATCA+AGG 0.535001 tig0022248:+51073 Msa1398340:CDS
ACCCAAATGTTGTCTATGAA+AGG 0.535118 tig0022248:-52582 None:intergenic
TGCAGAAGCAGCCCTTAAAA+GGG 0.535333 tig0022248:+52337 Msa1398340:CDS
GAAGAGATTTGGAAAATGGG+TGG 0.536302 tig0022248:-47042 None:intergenic
AGCTCAGTTTGAGGGTCATG+TGG 0.536763 tig0022248:+54515 Msa1398340:CDS
CTTCATAGTAGCACTCCATC+TGG 0.537752 tig0022248:-52100 None:intergenic
GCTCGTTATCTCACTGCACC+TGG 0.541669 tig0022248:+51954 Msa1398340:CDS
TGGTTGAGTTGCAGAACCTC+AGG 0.541852 tig0022248:+52162 Msa1398340:CDS
AATGAAGATCTTGGAATTGG+AGG 0.542268 tig0022248:+55361 Msa1398340:CDS
CAGAGGGAACTCAGAGAGAA+GGG 0.542428 tig0022248:+50722 Msa1398340:CDS
GCGCGATGAAAAGAATTTCA+GGG 0.542636 tig0022248:+53876 Msa1398340:CDS
GAAAATATTCGAACTTCTAA+GGG 0.544490 tig0022248:+52028 Msa1398340:CDS
TCATTCTGCGCGCAGACAAG+TGG 0.544526 tig0022248:+54557 Msa1398340:CDS
CTCAAACTGAGCTCTGGTAC+AGG 0.544563 tig0022248:-54505 None:intergenic
TAAGGAATGGTCTCTGAAGT+AGG 0.545171 tig0022248:-58284 None:intergenic
CTTAATGCTCGTGACAAAAG+AGG 0.546535 tig0022248:+55125 Msa1398340:CDS
CTGAAAGAGAAGGCTTTGTA+CGG 0.547568 tig0022248:+52069 Msa1398340:CDS
AGAGCTAGCAAAAGAGGTTG+CGG 0.547665 tig0022248:+51527 Msa1398340:CDS
CTTGCATTTAGAGTTACGAA+TGG 0.549661 tig0022248:+56558 Msa1398340:CDS
GATTTAGGTGTACTATCTCT+CGG 0.549935 tig0022248:+51219 Msa1398340:CDS
ATGACCCTCAAACTGAGCTC+TGG 0.550504 tig0022248:-54511 None:intergenic
AAGAACTTGAGCAGAATCAA+AGG 0.550634 tig0022248:+52132 Msa1398340:CDS
AAAGTCCAAAATTGAAGTAG+AGG 0.550949 tig0022248:+55535 Msa1398340:CDS
TCTCACTGCACCTGGCCTTG+TGG 0.552439 tig0022248:+51962 Msa1398340:CDS
CTGTCACCAGTTGCTTGAGA+TGG 0.552492 tig0022248:-54329 None:intergenic
TGTACCAGAGCTCAGTTTGA+GGG 0.552554 tig0022248:+54507 Msa1398340:CDS
TTAGCTTAGTGTTGGAGCTG+AGG 0.553240 tig0022248:+47619 Msa1398340:five_prime_UTR
AAAGTGAATGTTCTGAATGA+GGG 0.553274 tig0022248:+55596 Msa1398340:CDS
GCAGAGGGAACTCAGAGAGA+AGG 0.554862 tig0022248:+50721 Msa1398340:CDS
TGGCTTTGACAATCTTCAGT+AGG 0.555393 tig0022248:-56918 None:intergenic
TCTAGATTCCACAATCTGGA+TGG 0.556461 tig0022248:+49520 Msa1398340:intron
TAGAGAATTCGAACAGCAGA+GGG 0.557302 tig0022248:+50706 Msa1398340:intron
CTAGATTCCACAATCTGGAT+GGG 0.558043 tig0022248:+49521 Msa1398340:intron
TGAAAAGCAACACCAGCTGC+AGG 0.558469 tig0022248:+54110 Msa1398340:CDS
GCAGAATCAAAGGCAGATGA+TGG 0.559944 tig0022248:+52142 Msa1398340:CDS
TGAGAGTGAAGAATCAGAAA+GGG 0.561238 tig0022248:-52468 None:intergenic
TGAAAAGCAACACAAGCTGC+AGG 0.561618 tig0022248:+54278 Msa1398340:CDS
TTGAACTATTCTATTGCTGT+CGG 0.563784 tig0022248:+52365 Msa1398340:CDS
TTTATTTCAACCCGAAAGCA+TGG 0.565809 tig0022248:+51932 Msa1398340:CDS
TTGAGAGTGAAGAATCAGAA+AGG 0.567409 tig0022248:-52469 None:intergenic
TTCAATAAAATCTCTGTCAG+TGG 0.568804 tig0022248:+57100 Msa1398340:CDS
CTATCCCTCTCCGTCTCAGT+AGG 0.570057 tig0022248:-51636 None:intergenic
TATTCTTGATCTAAAACTGA+AGG 0.571425 tig0022248:+51416 Msa1398340:CDS
CAGTGGCAATGCATTAGAAA+GGG 0.572623 tig0022248:+57117 Msa1398340:CDS
CCAAACTCTGGGAACTGAAG+AGG 0.572864 tig0022248:+56584 Msa1398340:CDS
AAAATCAGCGAGATCTATGT+TGG 0.573024 tig0022248:-50276 None:intergenic
GAAACTTGAGTCAGATCTTG+AGG 0.573341 tig0022248:+53534 Msa1398340:CDS
GACCTGGAAAACTTGTCTCA+TGG 0.573341 tig0022248:-56938 None:intergenic
TAACCTTCCCAGAGTCAGCT+GGG 0.573905 tig0022248:-49566 None:intergenic
CGAACTTCTAAGGGAGCTAG+AGG 0.574403 tig0022248:+52037 Msa1398340:CDS
GATCACTTCGATTGCAAGAG+GGG 0.576870 tig0022248:+52633 Msa1398340:CDS
TCATGGTAAGCTCATTACAT+TGG 0.578349 tig0022248:-55013 None:intergenic
GTGAACCTACTGAGACGGAG+AGG 0.578350 tig0022248:+51631 Msa1398340:CDS
AAAATTGGAGACAACAGTCA+TGG 0.579128 tig0022248:+54068 Msa1398340:CDS
GAAGCATGATACGCATGAAG+TGG 0.580690 tig0022248:+51170 Msa1398340:CDS
AAATGAAGAAAGCAAGCACC+TGG 0.582066 tig0022248:+56617 Msa1398340:CDS
AGAGACTCCTGCATAGCGAC+CGG 0.582950 tig0022248:-55161 None:intergenic
AGAGGCAAAGCAACAGCTGT+AGG 0.583683 tig0022248:-50314 None:intergenic
GAAAATGGGTGGGAGAAAGA+TGG 0.584110 tig0022248:-47031 None:intergenic
AATTGTACTAAAAGTTCAGA+AGG 0.586528 tig0022248:+52518 Msa1398340:CDS
CAGATTCATCATGACTACCT+TGG 0.586731 tig0022248:-50763 None:intergenic
TTTCTCCTTCATAGCAAGGG+TGG 0.587879 tig0022248:-52009 None:intergenic
ATAAAAGTAAATGAAGAGCT+GGG 0.588013 tig0022248:+55338 Msa1398340:CDS
GATATTCAGAAAGTATCTAT+GGG 0.588634 tig0022248:+51723 Msa1398340:CDS
ACGAATGGATGCCAAACTCT+GGG 0.589028 tig0022248:+56573 Msa1398340:CDS
CATCCCAGCTGACTCTGGGA+AGG 0.589396 tig0022248:+49563 Msa1398340:CDS
CCTAGTGCGGGGATAAGGAA+TGG 0.590482 tig0022248:-58297 None:intergenic
TTCGTAACTCTAAATGCAAG+AGG 0.591265 tig0022248:-56555 None:intergenic
TCAGGGACTAAAGTTGTGAA+CGG 0.594505 tig0022248:+51840 Msa1398340:CDS
ACAATTACAACACTCAGGGA+TGG 0.595395 tig0022248:-58603 None:intergenic
AGATGGAGTTACAAATGGAT+GGG 0.596537 tig0022248:+51877 Msa1398340:CDS
TATAGATTATGTTATATAAG+GGG 0.597171 tig0022248:+58437 Msa1398340:three_prime_UTR
GGGTTGAAATAAAGCAGCAT+CGG 0.599968 tig0022248:-51922 None:intergenic
TGACAATCAGTTTCCACCAC+AGG 0.600238 tig0022248:+51275 Msa1398340:CDS
GAGTCCAAAACTGAAAGAGA+AGG 0.600288 tig0022248:+52059 Msa1398340:CDS
TTAGAGAATTCGAACAGCAG+AGG 0.605412 tig0022248:+50705 Msa1398340:intron
ACCTTAAGGAACACAAGAGT+AGG 0.606768 tig0022248:+54763 Msa1398340:CDS
AAGTAGAATGTTCATTCCTG+AGG 0.607414 tig0022248:-52178 None:intergenic
AAGATCTAGCATCCTTGGTG+AGG 0.608701 tig0022248:+50253 Msa1398340:CDS
AAAGACAAGACATTCTTCCA+TGG 0.611002 tig0022248:+58126 Msa1398340:CDS
CCTTGTACTCCTTTAACGAG+AGG 0.611316 tig0022248:-52871 None:intergenic
CTACAAACAACCTCTGACCA+AGG 0.613390 tig0022248:+50746 Msa1398340:CDS
AAGATCACTTCGATTGCAAG+AGG 0.613447 tig0022248:+52631 Msa1398340:CDS
TGAACAGGTTCTTAAGACAG+AGG 0.614044 tig0022248:+55043 Msa1398340:CDS
TTGGAGCTGAGGATGAAAAT+GGG 0.616264 tig0022248:+47630 Msa1398340:five_prime_UTR
AGATCACTTCGATTGCAAGA+GGG 0.616277 tig0022248:+52632 Msa1398340:CDS
TCTCATGCATAGAAAGAACC+TGG 0.618986 tig0022248:-52421 None:intergenic
ATCATGACTACCTTGGTCAG+AGG 0.620746 tig0022248:-50756 None:intergenic
AAGTTTACAAACTTGTTGTG+GGG 0.621362 tig0022248:+49700 Msa1398340:CDS
AGTGTGAGCTTGAGGTTGCA+AGG 0.623156 tig0022248:+54826 Msa1398340:CDS
TGTACGGAAAATGGACCAGA+TGG 0.623403 tig0022248:+52085 Msa1398340:CDS
CCTCGTACTTCTTCACTCGA+AGG 0.623917 tig0022248:+51063 Msa1398340:CDS
GTCAAATGTATAGTTCTCCA+GGG 0.624594 tig0022248:+54918 Msa1398340:CDS
GCTTCTCCTTTCTCTCGCTG+AGG 0.625158 tig0022248:-51249 None:intergenic
GAATGGTCTCTGAAGTAGGT+CGG 0.625729 tig0022248:-58280 None:intergenic
AAGAGGACATGAAGGACCAC+CGG 0.626032 tig0022248:+55142 Msa1398340:CDS
CATTCCTTATCCCCGCACTA+GGG 0.628749 tig0022248:+58298 Msa1398340:CDS
AACCTGTTCAGAAAGCCTCA+TGG 0.630172 tig0022248:-55030 None:intergenic
ACTAATTGATCAAAATAGTG+TGG 0.631760 tig0022248:+54731 Msa1398340:CDS
AGCATAGTGAGGAAATGCTG+TGG 0.633202 tig0022248:+55258 Msa1398340:CDS
TCGCAGTGAACCTACTGAGA+CGG 0.635236 tig0022248:+51626 Msa1398340:CDS
TGAAAGAGAGTGTGAGCTTG+AGG 0.637715 tig0022248:+54818 Msa1398340:CDS
AAACAAGCAGAACTACTACA+AGG 0.642243 tig0022248:-53274 None:intergenic
CATTGAGCACCTGAATAAGG+AGG 0.642782 tig0022248:+56665 Msa1398340:CDS
GACTCCTGCATAGCGACCGG+TGG 0.643734 tig0022248:-55158 None:intergenic
GGAAAGTGTCAGCAGAGATG+GGG 0.643881 tig0022248:+54863 Msa1398340:CDS
GCCCAAGCATTGTCCTGTGG+TGG 0.645370 tig0022248:-51288 None:intergenic
AGTCTAGCATCCAATTTCAG+AGG 0.647883 tig0022248:+57188 Msa1398340:CDS
TGAACCTACTGAGACGGAGA+GGG 0.651930 tig0022248:+51632 Msa1398340:CDS
CGTGACAAAAGAGGACATGA+AGG 0.653825 tig0022248:+55134 Msa1398340:CDS
TCAGTTTGAGGGTCATGTGG+AGG 0.655134 tig0022248:+54518 Msa1398340:CDS
ATGGATTATTGGCCTGTGCA+AGG 0.661108 tig0022248:-58342 None:intergenic
AATCAAACTCATGAGCCACA+AGG 0.666174 tig0022248:-51977 None:intergenic
AGTGTCAGCAGAGATGGGGA+AGG 0.671101 tig0022248:+54867 Msa1398340:CDS
CCTTCGAGTGAAGAAGTACG+AGG 0.671906 tig0022248:-51063 None:intergenic
AAAACAACTTGTGTTCTCTG+CGG 0.674830 tig0022248:+54013 Msa1398340:CDS
TGTGCCCAAGCATTGTCCTG+TGG 0.677896 tig0022248:-51291 None:intergenic
AATCCTCAATATGCAGCCAG+AGG 0.679292 tig0022248:+55703 Msa1398340:CDS
AATGTTCTGAATGAGGGCAA+TGG 0.686646 tig0022248:+55602 Msa1398340:CDS
AGAACTGACACAGTTACATG+AGG 0.687924 tig0022248:+56968 Msa1398340:CDS
GACCTTAGCAGCAATTACAG+AGG 0.691473 tig0022248:+53744 Msa1398340:CDS
GAAGGCTTAATTGAGAGTAA+CGG 0.692155 tig0022248:-58174 None:intergenic
CTTCGAGTGAAGAAGTACGA+GGG 0.693950 tig0022248:-51062 None:intergenic
GATCTATGTTGGCCTCACCA+AGG 0.695108 tig0022248:-50265 None:intergenic
TTCTCTTCAGAAATGCAGTG+AGG 0.704213 tig0022248:+55511 Msa1398340:CDS
TGAGAAATGGAACTTGCAAG+TGG 0.722510 tig0022248:+49613 Msa1398340:CDS
GATTATTGGCCTGTGCAAGG+TGG 0.768784 tig0022248:-58339 None:intergenic
AATGTAATGAGCTTACCATG+AGG 0.780587 tig0022248:+55015 Msa1398340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTATAAAAATAAA+AGG - tig0022248:57516-57535 None:intergenic 0.0%
!! TATATAAAAAGTGAAATTAA+TGG + tig0022248:48271-48290 Msa1398340:intron 10.0%
!! TAATTTCATTAAATAAACAA+AGG - tig0022248:51000-51019 None:intergenic 10.0%
!! TTTGTTTATTTAATGAAATT+AGG + tig0022248:50999-51018 Msa1398340:intron 10.0%
!!! TTTTTTTTTTTTTTTACCTT+GGG - tig0022248:55861-55880 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTACCT+TGG - tig0022248:55862-55881 None:intergenic 10.0%
!!! AATTTTATAAAAATAAAAGG+TGG - tig0022248:57513-57532 None:intergenic 10.0%
!! TATATAGATTATGTTATATA+AGG + tig0022248:58435-58454 Msa1398340:three_prime_UTR 10.0%
!! ATATAGATTATGTTATATAA+GGG + tig0022248:58436-58455 Msa1398340:three_prime_UTR 10.0%
!!! AATTTTTTTACTTCGTTTTT+TGG + tig0022248:47805-47824 Msa1398340:intron 15.0%
!!! TTAAATTTTTCAAGTAGATA+AGG + tig0022248:47837-47856 Msa1398340:intron 15.0%
!!! TCACTTTTTATATATTGTTA+GGG - tig0022248:48265-48284 None:intergenic 15.0%
!!! TTCACTTTTTATATATTGTT+AGG - tig0022248:48266-48285 None:intergenic 15.0%
!! AAGTAGTTTATATTAAATCA+AGG + tig0022248:49335-49354 Msa1398340:intron 15.0%
!! TGTTAATAATCACATTAATA+AGG + tig0022248:50817-50836 Msa1398340:CDS 15.0%
!! TTCATAATTTACAGTTTAAA+TGG + tig0022248:51664-51683 Msa1398340:CDS 15.0%
!!! TTTGTAGTTTTTTTTCTTAT+GGG - tig0022248:55799-55818 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+TGG - tig0022248:55979-55998 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTACCTTG+GGG - tig0022248:55860-55879 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG + tig0022248:55979-55998 Msa1398340:intron 15.0%
!! AAAATTGAAATCAGAAATAA+AGG - tig0022248:56768-56787 None:intergenic 15.0%
!! AACTAACTAATAAAATCTTA+AGG - tig0022248:57273-57292 None:intergenic 15.0%
!!! TAAATCTATTATTCTGTTTT+AGG + tig0022248:57313-57332 Msa1398340:intron 15.0%
!!! AATGATTTGTATTAATTGAA+TGG + tig0022248:57390-57409 Msa1398340:intron 15.0%
!! ACTATCAAATATTTACTTTA+AGG + tig0022248:57840-57859 Msa1398340:intron 15.0%
!! ACAAAATATAAGATATAATG+GGG - tig0022248:58396-58415 None:intergenic 15.0%
!! CACAAAATATAAGATATAAT+GGG - tig0022248:58397-58416 None:intergenic 15.0%
!! ACACAAAATATAAGATATAA+TGG - tig0022248:58398-58417 None:intergenic 15.0%
!! TATAGATTATGTTATATAAG+GGG + tig0022248:58437-58456 Msa1398340:three_prime_UTR 15.0%
!!! TTTTTGCTTTTTTTGAATTC+AGG + tig0022248:47570-47589 Msa1398340:intron 20.0%
!! TTTGGAAATTAATGTATGTT+AGG + tig0022248:47663-47682 Msa1398340:five_prime_UTR 20.0%
!! AAGAAAAGAAGTTTACAAAT+CGG - tig0022248:48051-48070 None:intergenic 20.0%
!! ATATTTGAAAAGTAGGTTAT+AGG - tig0022248:48154-48173 None:intergenic 20.0%
!!! CACTTTTTATATATTGTTAG+GGG - tig0022248:48264-48283 None:intergenic 20.0%
!!! AATGTTACAGAAAATCATTT+TGG - tig0022248:48371-48390 None:intergenic 20.0%
!! TATATAGAATAAAGGGAAAT+TGG + tig0022248:48557-48576 Msa1398340:intron 20.0%
!! TGTATAAATATCAGAATACA+AGG + tig0022248:48646-48665 Msa1398340:intron 20.0%
!!! TTTTATTGAAAGATTGAGAA+AGG - tig0022248:48776-48795 None:intergenic 20.0%
!! GATAGGATATATAGAATAAA+GGG - tig0022248:49080-49099 None:intergenic 20.0%
!! AGATAGGATATATAGAATAA+AGG - tig0022248:49081-49100 None:intergenic 20.0%
!! TTTATTCTATATATCCTATC+TGG + tig0022248:49080-49099 Msa1398340:intron 20.0%
!! TCAAATAAAATAATTCTCCA+AGG - tig0022248:49287-49306 None:intergenic 20.0%
!! TTTATATTAAATCAAGGCAA+TGG + tig0022248:49341-49360 Msa1398340:intron 20.0%
!! CATTAATTGCATAAAAAGAT+AGG - tig0022248:49474-49493 None:intergenic 20.0%
!!! TCTTTTTATGCAATTAATGA+CGG + tig0022248:49475-49494 Msa1398340:intron 20.0%
!! TATTAAAACAAGACAATATG+AGG + tig0022248:49674-49693 Msa1398340:CDS 20.0%
!! TTAAACTTCTATAAATGCTA+CGG - tig0022248:49772-49791 None:intergenic 20.0%
!! CATGAATATAAGCAATATAA+TGG - tig0022248:49861-49880 None:intergenic 20.0%
!! CATTATATTGCTTATATTCA+TGG + tig0022248:49859-49878 Msa1398340:intron 20.0%
!! TAATTACATAAGGAATGAAA+GGG - tig0022248:50420-50439 None:intergenic 20.0%
!! ATAATTACATAAGGAATGAA+AGG - tig0022248:50421-50440 None:intergenic 20.0%
!! CACATTTGTATAATTACATA+AGG - tig0022248:50430-50449 None:intergenic 20.0%
!! GTAATTATACAAATGTGTTT+CGG + tig0022248:50433-50452 Msa1398340:intron 20.0%
!! TAATGTGATTATTAACATTC+TGG - tig0022248:50814-50833 None:intergenic 20.0%
!!! TAATGAAATTTTCTGAAGAT+AGG + tig0022248:52267-52286 Msa1398340:CDS 20.0%
!! ATATATTTACAAAATGCATC+TGG - tig0022248:52688-52707 None:intergenic 20.0%
!!! TTAAATTTGCCTCTAAAATT+TGG - tig0022248:52937-52956 None:intergenic 20.0%
!! TCTTACTCATAAAATTAATG+AGG + tig0022248:52982-53001 Msa1398340:CDS 20.0%
!! AAAAATCTTCAGAGAAAAAT+TGG + tig0022248:54053-54072 Msa1398340:CDS 20.0%
!!! TTGTAGTTTTTTTTCTTATG+GGG - tig0022248:55798-55817 None:intergenic 20.0%
!!! TTTTTTTTTTTTTACCTTGG+GGG - tig0022248:55859-55878 None:intergenic 20.0%
!! AAAAAAAAAAAAAACACACG+TGG + tig0022248:55868-55887 Msa1398340:intron 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG + tig0022248:55978-55997 Msa1398340:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG + tig0022248:55980-55999 Msa1398340:intron 20.0%
!! TATACACACAAATGTAAATA+AGG + tig0022248:56182-56201 Msa1398340:intron 20.0%
!! GTTATGTAAATAAATTGTCA+AGG - tig0022248:56516-56535 None:intergenic 20.0%
!! TATTTACATAACTGTTTGAT+AGG + tig0022248:56524-56543 Msa1398340:intron 20.0%
!!! AATTTTTGCTGATAACATAT+TGG + tig0022248:57352-57371 Msa1398340:intron 20.0%
!!! TGCATTCAAATTTTAGTATT+TGG - tig0022248:57635-57654 None:intergenic 20.0%
!!! TATTGAAACTTGCTATAATT+GGG - tig0022248:57698-57717 None:intergenic 20.0%
!!! TTATTGAAACTTGCTATAAT+TGG - tig0022248:57699-57718 None:intergenic 20.0%
!! TTTATCCATTAACAAATAAG+TGG - tig0022248:57900-57919 None:intergenic 20.0%
!!! AGAGTTATTATTTTTTTGCA+AGG + tig0022248:58477-58496 Msa1398340:three_prime_UTR 20.0%
!!! GAGTTATTATTTTTTTGCAA+GGG + tig0022248:58478-58497 Msa1398340:three_prime_UTR 20.0%
! TTTGAAGAGATTTGGAAAAT+GGG - tig0022248:47048-47067 None:intergenic 25.0%
! ATTTGAAGAGATTTGGAAAA+TGG - tig0022248:47049-47068 None:intergenic 25.0%
! AAATGGAATTTGAAGAGATT+TGG - tig0022248:47056-47075 None:intergenic 25.0%
!!! ACTTTAAGATAGAGAATCAA+TGG - tig0022248:47092-47111 None:intergenic 25.0%
! ACTGAACTAAATCATTAACA+TGG - tig0022248:47232-47251 None:intergenic 25.0%
!! TGTTAATGATTTAGTTCAGT+TGG + tig0022248:47232-47251 Msa1398340:intron 25.0%
!!! TGCTTTTATTTCTCCATAAA+AGG + tig0022248:47283-47302 Msa1398340:intron 25.0%
!!! GCTTTTATTTCTCCATAAAA+GGG + tig0022248:47284-47303 Msa1398340:intron 25.0%
!! TAAGAAAGTTTTCCCTTTTA+TGG - tig0022248:47299-47318 None:intergenic 25.0%
! ATAAAAGGGAAAACTTTCTT+AGG + tig0022248:47298-47317 Msa1398340:intron 25.0%
!!! ACTTTTAATTCTAGATCAGT+AGG + tig0022248:47399-47418 Msa1398340:intron 25.0%
!!! CTTTTAATTCTAGATCAGTA+GGG + tig0022248:47400-47419 Msa1398340:intron 25.0%
!!! TAATAGCTGATTTGCTTTTA+AGG + tig0022248:47447-47466 Msa1398340:intron 25.0%
!!! TTAAGTTTTGTGTTTAACCA+AGG + tig0022248:47509-47528 Msa1398340:intron 25.0%
! ACTAAGCTAACTGTAATTTA+CGG - tig0022248:47609-47628 None:intergenic 25.0%
! CATTAATTTCCAAAACTTGA+AGG - tig0022248:47657-47676 None:intergenic 25.0%
! GATTGAGAAAACTAAAGTTA+AGG + tig0022248:47730-47749 Msa1398340:CDS 25.0%
!!! TTTTACTTCGTTTTTTGGTT+TGG + tig0022248:47810-47829 Msa1398340:intron 25.0%
! TTCTCAGATTTAAGCTTAAA+TGG - tig0022248:47963-47982 None:intergenic 25.0%
! GAATTTATTCAAAATCCAGT+TGG + tig0022248:47980-47999 Msa1398340:intron 25.0%
! CACGAATATATTTGAAAAGT+AGG - tig0022248:48161-48180 None:intergenic 25.0%
!! TGATTTTCTGTAACATTTCT+AGG + tig0022248:48374-48393 Msa1398340:intron 25.0%
! TCTAGATAACACAGAATAAA+GGG + tig0022248:48502-48521 Msa1398340:intron 25.0%
! TGGTAGGATATATAGAATAA+AGG + tig0022248:48549-48568 Msa1398340:intron 25.0%
! GGTAGGATATATAGAATAAA+GGG + tig0022248:48550-48569 Msa1398340:intron 25.0%
!!! AAAGATGAATTGGTTTTAGT+TGG - tig0022248:48819-48838 None:intergenic 25.0%
!!! CGGTAAATTTTGTTTTTACA+TGG + tig0022248:49495-49514 Msa1398340:intron 25.0%
!!! GTCTTGTTTTAATATCTTGA+AGG - tig0022248:49668-49687 None:intergenic 25.0%
!!! AAAGTTTACAAACTTGTTGT+GGG + tig0022248:49699-49718 Msa1398340:CDS 25.0%
! GAATATAAGCAATATAATGG+AGG - tig0022248:49858-49877 None:intergenic 25.0%
!!! TATTGAATAAGCCTTATTTC+TGG + tig0022248:49886-49905 Msa1398340:intron 25.0%
!!! ATTGAATAAGCCTTATTTCT+GGG + tig0022248:49887-49906 Msa1398340:intron 25.0%
! TTTACAGTATCTATACTTTG+AGG + tig0022248:49913-49932 Msa1398340:intron 25.0%
! CAATTCTTAAGCATTTCTAA+TGG - tig0022248:50136-50155 None:intergenic 25.0%
!!! ATTTTTTCCTTAACCAATTC+AGG + tig0022248:50223-50242 Msa1398340:intron 25.0%
!!! TTTTTTCCTTAACCAATTCA+GGG + tig0022248:50224-50243 Msa1398340:intron 25.0%
! CTAAAGAACTCTTAACAATT+AGG - tig0022248:50510-50529 None:intergenic 25.0%
! ACTGTGAATTATGACATTTA+AGG + tig0022248:50637-50656 Msa1398340:intron 25.0%
! TCTGTTAGGATATAGAATAA+AGG + tig0022248:50928-50947 Msa1398340:intron 25.0%
! AATAAACAAAGGAGAATGTT+AGG - tig0022248:50989-51008 None:intergenic 25.0%
!! TTTTCAATTTCCCTTTTGAA+TGG - tig0022248:51026-51045 None:intergenic 25.0%
! ATTCAAAAGGGAAATTGAAA+AGG + tig0022248:51025-51044 Msa1398340:CDS 25.0%
! TTCAAAAGGGAAATTGAAAA+GGG + tig0022248:51026-51045 Msa1398340:CDS 25.0%
!! TATTCTTGATCTAAAACTGA+AGG + tig0022248:51416-51435 Msa1398340:CDS 25.0%
! CAAAATCATTCTGATGAAAT+TGG + tig0022248:51450-51469 Msa1398340:CDS 25.0%
! TTTACAGTTTAAATGGCATA+AGG + tig0022248:51671-51690 Msa1398340:CDS 25.0%
! TTACAGTTTAAATGGCATAA+GGG + tig0022248:51672-51691 Msa1398340:CDS 25.0%
!!! AGATATTCAGAAAGTATCTA+TGG + tig0022248:51722-51741 Msa1398340:CDS 25.0%
!!! GATATTCAGAAAGTATCTAT+GGG + tig0022248:51723-51742 Msa1398340:CDS 25.0%
! AGAAAATATTCGAACTTCTA+AGG + tig0022248:52027-52046 Msa1398340:CDS 25.0%
! GAAAATATTCGAACTTCTAA+GGG + tig0022248:52028-52047 Msa1398340:CDS 25.0%
!! TTATCTGCTCATTCATATTT+TGG - tig0022248:52250-52269 None:intergenic 25.0%
! AATTGTACTAAAAGTTCAGA+AGG + tig0022248:52518-52537 Msa1398340:CDS 25.0%
! TACTCATAAAATTAATGAGG+TGG + tig0022248:52985-53004 Msa1398340:CDS 25.0%
! TACTTCTATAATCTGTCAAA+AGG - tig0022248:53015-53034 None:intergenic 25.0%
!! TATTATTTCTTTCTGCAAAG+TGG - tig0022248:53128-53147 None:intergenic 25.0%
!! ATTTTGCAGATCATTATTCA+TGG - tig0022248:53182-53201 None:intergenic 25.0%
! TAATAAGTTGCAGAAATTAG+TGG + tig0022248:53219-53238 Msa1398340:CDS 25.0%
! TAGTCAAGAAATTATAAAGC+TGG + tig0022248:53687-53706 Msa1398340:CDS 25.0%
! AGTCAAGAAATTATAAAGCT+GGG + tig0022248:53688-53707 Msa1398340:CDS 25.0%
! ATTAATCTCAGATGAAATCT+TGG - tig0022248:53818-53837 None:intergenic 25.0%
! AAAGAATTTCAGGGAAAAAT+CGG + tig0022248:53885-53904 Msa1398340:CDS 25.0%
! AAAAATCTTCAGGGAAAAAT+CGG + tig0022248:54221-54240 Msa1398340:CDS 25.0%
! ATCTTCTTCTATTAGTTATC+TGG + tig0022248:54428-54447 Msa1398340:CDS 25.0%
! ACTAATTGATCAAAATAGTG+TGG + tig0022248:54731-54750 Msa1398340:CDS 25.0%
!!! AATCAGATAATGAGTTGATA+AGG + tig0022248:54982-55001 Msa1398340:CDS 25.0%
! AATAAAAGTAAATGAAGAGC+TGG + tig0022248:55337-55356 Msa1398340:CDS 25.0%
! ATAAAAGTAAATGAAGAGCT+GGG + tig0022248:55338-55357 Msa1398340:CDS 25.0%
! TTCTTGAGCATTTAATAAAG+AGG - tig0022248:55633-55652 None:intergenic 25.0%
!!! TTTTTTTTTTTTACCTTGGG+GGG - tig0022248:55858-55877 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG + tig0022248:55981-56000 Msa1398340:intron 25.0%
! AAAAAATTACCTCCTTATTC+AGG - tig0022248:56677-56696 None:intergenic 25.0%
! GTAACTAGAATAGATGAAAA+TGG - tig0022248:56734-56753 None:intergenic 25.0%
! AGAAATAAAGGAAAGAGTAA+TGG - tig0022248:56756-56775 None:intergenic 25.0%
! AATATAATAGTAGCAACTGA+AGG - tig0022248:56822-56841 None:intergenic 25.0%
! ATTAATAAGAATCTAGACGA+AGG - tig0022248:57031-57050 None:intergenic 25.0%
! ATTAATTCTGTACTTTGATC+AGG + tig0022248:57045-57064 Msa1398340:intron 25.0%
!!! GTTATTATGTTTTAGTCAGT+TGG - tig0022248:57447-57466 None:intergenic 25.0%
!!! TTTTAGTATTTGGAACCAAT+TGG - tig0022248:57625-57644 None:intergenic 25.0%
! AAAATTTGAATGCAACAAGT+TGG + tig0022248:57641-57660 Msa1398340:intron 25.0%
! ATAGCAAGTTTCAATAAGAA+TGG + tig0022248:57702-57721 Msa1398340:intron 25.0%
! CAATAAGAATGGATGTAATA+CGG + tig0022248:57713-57732 Msa1398340:intron 25.0%
!! GTTTACCACTTATTTGTTAA+TGG + tig0022248:57892-57911 Msa1398340:intron 25.0%
!!! ATATTGTTGACTTTGTTACA+TGG + tig0022248:57932-57951 Msa1398340:intron 25.0%
! AAAAAATGTCTCAAACATTG+TGG - tig0022248:58004-58023 None:intergenic 25.0%
! TCTTAATTCTTAATCAAGCA+TGG - tig0022248:58364-58383 None:intergenic 25.0%
! ATTAAGAATTAAGATATCCG+CGG + tig0022248:58370-58389 Msa1398340:intron 25.0%
!!! TATTATTTTTTTGCAAGGGT+TGG + tig0022248:58482-58501 Msa1398340:three_prime_UTR 25.0%
! AAAAACAATTACAACACTCA+GGG - tig0022248:58610-58629 None:intergenic 25.0%
!!! TTGTAATTGTTTTTCTGTAC+AGG + tig0022248:58616-58635 Msa1398340:three_prime_UTR 25.0%
!!! GATGGTGATTTTTTTGAGAA+TGG - tig0022248:47016-47035 None:intergenic 30.0%
! TCATCTTTTGTCTCTTTACA+AGG + tig0022248:47114-47133 Msa1398340:five_prime_UTR 30.0%
CTTAAGAAGCTTCATTATCT+TGG + tig0022248:47371-47390 Msa1398340:intron 30.0%
AAAAACACTCAAACCAACTT+AGG - tig0022248:47427-47446 None:intergenic 30.0%
TTAAGTGTGAATTGTGAATG+TGG + tig0022248:47540-47559 Msa1398340:intron 30.0%
! AATTACAGTTAGCTTAGTGT+TGG + tig0022248:47611-47630 Msa1398340:five_prime_UTR 30.0%
! GTTAGGTGTGATTAATTTTC+TGG + tig0022248:47680-47699 Msa1398340:five_prime_UTR 30.0%
! TAATGTCTAGAGTTACCAAA+TGG + tig0022248:47705-47724 Msa1398340:exon 30.0%
! AGTTTTCTCAATCTTCCATT+TGG - tig0022248:47723-47742 None:intergenic 30.0%
TGAGAAAACTAAAGTTAAGG+TGG + tig0022248:47733-47752 Msa1398340:CDS 30.0%
AAAAACTTACATGTGTAGCA+TGG - tig0022248:47775-47794 None:intergenic 30.0%
AAAGAAGTTTACAAATCGGT+TGG - tig0022248:48047-48066 None:intergenic 30.0%
TTGCATTCATTAGACATAAG+AGG + tig0022248:48119-48138 Msa1398340:intron 30.0%
TGCATTCATTAGACATAAGA+GGG + tig0022248:48120-48139 Msa1398340:intron 30.0%
! TAAAGTGACAAACTTTTCAG+TGG + tig0022248:48232-48251 Msa1398340:intron 30.0%
ATTCTGTACTAATCATGTGA+TGG + tig0022248:48299-48318 Msa1398340:intron 30.0%
CTCTAGATAACACAGAATAA+AGG + tig0022248:48501-48520 Msa1398340:intron 30.0%
AACACAGAATAAAGGGAAAT+TGG + tig0022248:48509-48528 Msa1398340:intron 30.0%
TTAGACATTGTGAATAGAGT+AGG + tig0022248:48691-48710 Msa1398340:intron 30.0%
TAGACATTGTGAATAGAGTA+GGG + tig0022248:48692-48711 Msa1398340:intron 30.0%
AAAAGAATTCGAGTCTAAGA+AGG + tig0022248:48907-48926 Msa1398340:intron 30.0%
AATAGAACCATCTCTAACTA+GGG - tig0022248:48948-48967 None:intergenic 30.0%
!! AAGGGGGTATTTGTATAAAT+AGG - tig0022248:49000-49019 None:intergenic 30.0%
AATACAAATGAGTTCCAGAT+AGG - tig0022248:49097-49116 None:intergenic 30.0%
AAGTTCAATATATGCTGACA+TGG + tig0022248:49206-49225 Msa1398340:intron 30.0%
!! TTGAGTGCTGACAATATTAT+GGG - tig0022248:49232-49251 None:intergenic 30.0%
GCACTCAACATTAAACTTAT+TGG + tig0022248:49244-49263 Msa1398340:intron 30.0%
!!! TAAACTTATTGGCCCTTTTT+TGG + tig0022248:49255-49274 Msa1398340:intron 30.0%
!!! AAACTTATTGGCCCTTTTTT+GGG + tig0022248:49256-49275 Msa1398340:intron 30.0%
AGACTTATGTCATGAAGATT+CGG - tig0022248:49387-49406 None:intergenic 30.0%
! AGTCTTGTAGTTTCATAGAT+TGG - tig0022248:49645-49664 None:intergenic 30.0%
!! GAAAGTTTACAAACTTGTTG+TGG + tig0022248:49698-49717 Msa1398340:CDS 30.0%
!! AAGTTTACAAACTTGTTGTG+GGG + tig0022248:49700-49719 Msa1398340:CDS 30.0%
TTCTTAAGCATTTCTAATGG+TGG - tig0022248:50133-50152 None:intergenic 30.0%
TGTGTGATATATTAATGCCA+AGG - tig0022248:50485-50504 None:intergenic 30.0%
TTGGCATTAATATATCACAC+AGG + tig0022248:50484-50503 Msa1398340:intron 30.0%
TTAGCTGCTTAAGATATCAT+TGG + tig0022248:50526-50545 Msa1398340:intron 30.0%
! AATGTACCTAAAACCAGTTT+TGG - tig0022248:50617-50636 None:intergenic 30.0%
! ATTTAAGGATTTGCTTTAGC+TGG + tig0022248:50652-50671 Msa1398340:intron 30.0%
TGATTATTAACATTCTGGTC+AGG - tig0022248:50809-50828 None:intergenic 30.0%
TTCTTCTCTTATTCTCTGTT+AGG + tig0022248:50914-50933 Msa1398340:intron 30.0%
GAATAAAGGAGAATTAGTCA+TGG + tig0022248:50942-50961 Msa1398340:intron 30.0%
TGAAATTAGGTCCATTCAAA+AGG + tig0022248:51012-51031 Msa1398340:intron 30.0%
GAAATTAGGTCCATTCAAAA+GGG + tig0022248:51013-51032 Msa1398340:intron 30.0%
CTATTCAGCTGCAAATAAAT+TGG + tig0022248:51329-51348 Msa1398340:CDS 30.0%
TACAGTTTAAATGGCATAAG+GGG + tig0022248:51673-51692 Msa1398340:CDS 30.0%
!!! GGATTTTAGGTTCTTTAACT+TGG + tig0022248:51758-51777 Msa1398340:CDS 30.0%
! TATTTTCTCCTTCATAGCAA+GGG - tig0022248:52015-52034 None:intergenic 30.0%
! ATATTTTCTCCTTCATAGCA+AGG - tig0022248:52016-52035 None:intergenic 30.0%
TTGAACTATTCTATTGCTGT+CGG + tig0022248:52365-52384 Msa1398340:CDS 30.0%
! TAGTACAATTCACTAGTTCT+GGG - tig0022248:52508-52527 None:intergenic 30.0%
TTAGTACAATTCACTAGTTC+TGG - tig0022248:52509-52528 None:intergenic 30.0%
TTCCTTTCATAGACAACATT+TGG + tig0022248:52580-52599 Msa1398340:CDS 30.0%
TCCTTTCATAGACAACATTT+GGG + tig0022248:52581-52600 Msa1398340:CDS 30.0%
! ATACTCAGATGTGTTTTCTA+AGG + tig0022248:52706-52725 Msa1398340:CDS 30.0%
! TTGAAATTTTTCACGTTCTG+TGG - tig0022248:52774-52793 None:intergenic 30.0%
GTGAAAAATTTCAACTCTCT+AGG + tig0022248:52780-52799 Msa1398340:CDS 30.0%
GAGGCAAATTTAAAAGATCT+TGG + tig0022248:52944-52963 Msa1398340:CDS 30.0%
TGGATATTTCATCATGAAGA+TGG - tig0022248:53108-53127 None:intergenic 30.0%
! TAATGCTTTTGATAGGATCT+TGG + tig0022248:53354-53373 Msa1398340:CDS 30.0%
TTTAGTGCACGAAAAACAAA+TGG + tig0022248:53399-53418 Msa1398340:CDS 30.0%
TTGTCATGAAACAGAAGTTT+GGG + tig0022248:53458-53477 Msa1398340:CDS 30.0%
!!! GTTGTCTAGTTTTGATCATT+TGG + tig0022248:53624-53643 Msa1398340:CDS 30.0%
AATTATAAAGCTGGGTACTT+CGG + tig0022248:53696-53715 Msa1398340:CDS 30.0%
!!! GTGTTGCTTTTCATTCAATT+CGG - tig0022248:54103-54122 None:intergenic 30.0%
TGTGTGATGAAAAAATCTTC+AGG + tig0022248:54043-54062 Msa1398340:CDS 30.0%
GTGTGATGAAAAAATCTTCA+GGG + tig0022248:54044-54063 Msa1398340:CDS 30.0%
! TTCTAGAGAATTGAATTGCA+TGG + tig0022248:54632-54651 Msa1398340:CDS 30.0%
TGACTACTTAAAATCTGAGT+TGG + tig0022248:54683-54702 Msa1398340:CDS 30.0%
! GAGAACTATACATTTGACTT+TGG - tig0022248:54916-54935 None:intergenic 30.0%
GAATTTGTCTACTCATTTGA+AGG + tig0022248:55073-55092 Msa1398340:CDS 30.0%
TCTGAGAATTGCATTTATCA+AGG + tig0022248:55181-55200 Msa1398340:CDS 30.0%
! TTTGTCAAAAAAGCATAGTG+AGG + tig0022248:55247-55266 Msa1398340:CDS 30.0%
AAATGCTTATGACCTGTTAA+AGG + tig0022248:55424-55443 Msa1398340:CDS 30.0%
AAAGTCCAAAATTGAAGTAG+AGG + tig0022248:55535-55554 Msa1398340:CDS 30.0%
! AGTAACCTCTACTTCAATTT+TGG - tig0022248:55543-55562 None:intergenic 30.0%
! TAAAGTGAATGTTCTGAATG+AGG + tig0022248:55595-55614 Msa1398340:CDS 30.0%
! AAAGTGAATGTTCTGAATGA+GGG + tig0022248:55596-55615 Msa1398340:CDS 30.0%
!!! GGTAACTGACTGTTTTATTT+TGG + tig0022248:55724-55743 Msa1398340:intron 30.0%
! ATCGAAATCACATGTTTTCT+AGG + tig0022248:56092-56111 Msa1398340:intron 30.0%
! AAGTAGAAGTTCTAGCTAAA+AGG - tig0022248:56285-56304 None:intergenic 30.0%
AACAAGGAAGAAATGATAAC+TGG - tig0022248:56358-56377 None:intergenic 30.0%
AAATGGGAAATAAAGGCAAA+TGG - tig0022248:56388-56407 None:intergenic 30.0%
TGAGAACAAATGGGAAATAA+AGG - tig0022248:56395-56414 None:intergenic 30.0%
CAAAGAGTTAATGTAAGACT+AGG - tig0022248:56420-56439 None:intergenic 30.0%
AGTCTTACATTAACTCTTTG+AGG + tig0022248:56420-56439 Msa1398340:intron 30.0%
! ACATTAACTCTTTGAGGAAA+AGG + tig0022248:56426-56445 Msa1398340:intron 30.0%
GGAATCTTTCATAGTAAACA+AGG - tig0022248:57010-57029 None:intergenic 30.0%
! CAGAGATTTTATTGAACACA+GGG - tig0022248:57096-57115 None:intergenic 30.0%
! ACAGAGATTTTATTGAACAC+AGG - tig0022248:57097-57116 None:intergenic 30.0%
TTCAATAAAATCTCTGTCAG+TGG + tig0022248:57100-57119 Msa1398340:CDS 30.0%
!!! TGTTTTAGGAAAGTTGTTAG+TGG + tig0022248:57327-57346 Msa1398340:intron 30.0%
AATGGAACTAAAATGAGAGT+TGG + tig0022248:57408-57427 Msa1398340:intron 30.0%
!!! TTATGTTTTAGTCAGTTGGT+TGG - tig0022248:57443-57462 None:intergenic 30.0%
!! TATTTGGAACCAATTGGTTT+TGG - tig0022248:57619-57638 None:intergenic 30.0%
! AACAAGTTGGAGTAATTGTT+CGG + tig0022248:57654-57673 Msa1398340:intron 30.0%
! CAAATACCTACTCATTGTTT+TGG + tig0022248:57794-57813 Msa1398340:intron 30.0%
AAGGTGGCAAACTAAAAAAA+TGG - tig0022248:58326-58345 None:intergenic 30.0%
! CTTAATCAAGCATGGATTAT+TGG - tig0022248:58356-58375 None:intergenic 30.0%
AACTCTTGATATAGCTGATA+GGG - tig0022248:58463-58482 None:intergenic 30.0%
TAACTCTTGATATAGCTGAT+AGG - tig0022248:58464-58483 None:intergenic 30.0%
! ATTTCATAGTTTTCATGACG+AGG + tig0022248:58511-58530 Msa1398340:three_prime_UTR 30.0%
GAAAAACAATTACAACACTC+AGG - tig0022248:58611-58630 None:intergenic 30.0%
!! TCTTCACTTTTGTCAGTCAT+TGG + tig0022248:46931-46950 Msa1398340:five_prime_UTR 35.0%
!! CTTCACTTTTGTCAGTCATT+GGG + tig0022248:46932-46951 Msa1398340:five_prime_UTR 35.0%
!!! GGTTCTGAGTAGTTTCTTTT+GGG + tig0022248:46953-46972 Msa1398340:five_prime_UTR 35.0%
!!! TGAGTAGTTTCTTTTGGGTT+GGG + tig0022248:46958-46977 Msa1398340:five_prime_UTR 35.0%
AAGAGATTTGGAAAATGGGT+GGG - tig0022248:47044-47063 None:intergenic 35.0%
ATGGATCGAGTAGAAAGAAA+TGG - tig0022248:47073-47092 None:intergenic 35.0%
CACACTTAATCACTTATCCT+TGG - tig0022248:47529-47548 None:intergenic 35.0%
!! AAAATGGGACCTTCAAGTTT+TGG + tig0022248:47645-47664 Msa1398340:five_prime_UTR 35.0%
GAGTATAACATAATGCCAAC+TGG - tig0022248:47998-48017 None:intergenic 35.0%
AAACTAAACAAGAGAAGCAG+AGG + tig0022248:48188-48207 Msa1398340:intron 35.0%
AACTAAACAAGAGAAGCAGA+GGG + tig0022248:48189-48208 Msa1398340:intron 35.0%
TTATATATTGTTAGGGGCCA+CGG - tig0022248:48258-48277 None:intergenic 35.0%
! GATTAACTTTTCAGCAAGTC+AGG - tig0022248:48478-48497 None:intergenic 35.0%
GGAAATTGGAATAGCTAGTT+TGG + tig0022248:48523-48542 Msa1398340:intron 35.0%
GAATAGAACCATCTCTAACT+AGG - tig0022248:48949-48968 None:intergenic 35.0%
TTAGCTAACGAGTCAGTTAA+GGG - tig0022248:49018-49037 None:intergenic 35.0%
ATTAGCTAACGAGTCAGTTA+AGG - tig0022248:49019-49038 None:intergenic 35.0%
CACATAATCAAGAAAGAGGT+TGG - tig0022248:49138-49157 None:intergenic 35.0%
ATGGCACATAATCAAGAAAG+AGG - tig0022248:49142-49161 None:intergenic 35.0%
! CTCAAGATGACATTTTCGAA+TGG - tig0022248:49161-49180 None:intergenic 35.0%
!! GTTGAGTGCTGACAATATTA+TGG - tig0022248:49233-49252 None:intergenic 35.0%
!! TAAATCAAGGCAATGGATTG+TGG + tig0022248:49348-49367 Msa1398340:intron 35.0%
ACCAAAGCAAATGTGAGAAA+TGG + tig0022248:49600-49619 Msa1398340:CDS 35.0%
TCCATTTCTCACATTTGCTT+TGG - tig0022248:49604-49623 None:intergenic 35.0%
CTGTAAAAGACCCAGAAATA+AGG - tig0022248:49900-49919 None:intergenic 35.0%
AAAATCAGCGAGATCTATGT+TGG - tig0022248:50279-50298 None:intergenic 35.0%
!! GAACTTCATTTTCTCTGAAG+TGG + tig0022248:50380-50399 Msa1398340:intron 35.0%
TAGATGCATTTCTGTTTCCT+TGG + tig0022248:50465-50484 Msa1398340:intron 35.0%
!!! TCACTTCCAAAACTGGTTTT+AGG + tig0022248:50608-50627 Msa1398340:CDS 35.0%
ATATATAGAGTACGCTTGTG+AGG - tig0022248:50858-50877 None:intergenic 35.0%
! CATGGATGTTGGTTAGTTAT+TGG + tig0022248:50960-50979 Msa1398340:intron 35.0%
GATTTAGGTGTACTATCTCT+CGG + tig0022248:51219-51238 Msa1398340:CDS 35.0%
TATCTATGGGATTACCTGAA+AGG + tig0022248:51736-51755 Msa1398340:CDS 35.0%
ATCTATGGGATTACCTGAAA+GGG + tig0022248:51737-51756 Msa1398340:CDS 35.0%
! GATTACCTGAAAGGGATTTT+AGG + tig0022248:51745-51764 Msa1398340:CDS 35.0%
AAGAACCTAAAATCCCTTTC+AGG - tig0022248:51753-51772 None:intergenic 35.0%
AATCTAGCGATCCAATTTCA+GGG + tig0022248:51823-51842 Msa1398340:CDS 35.0%
ACAACTTTAGTCCCTGAAAT+TGG - tig0022248:51837-51856 None:intergenic 35.0%
AAGATGGAGTTACAAATGGA+TGG + tig0022248:51876-51895 Msa1398340:CDS 35.0%
AGATGGAGTTACAAATGGAT+GGG + tig0022248:51877-51896 Msa1398340:CDS 35.0%
TTTATTTCAACCCGAAAGCA+TGG + tig0022248:51932-51951 Msa1398340:CDS 35.0%
! AAAGCCTTCTCTTTCAGTTT+TGG - tig0022248:52066-52085 None:intergenic 35.0%
AAGAACTTGAGCAGAATCAA+AGG + tig0022248:52132-52151 Msa1398340:CDS 35.0%
AAGTAGAATGTTCATTCCTG+AGG - tig0022248:52181-52200 None:intergenic 35.0%
TGCATATATGCAATTTCTGC+TGG + tig0022248:52200-52219 Msa1398340:CDS 35.0%
TCAACAGCGAGTTTGAAAAA+AGG + tig0022248:52306-52325 Msa1398340:CDS 35.0%
CAACAGCGAGTTTGAAAAAA+GGG + tig0022248:52307-52326 Msa1398340:CDS 35.0%
! GTTCAATCTAGCCCTTTTAA+GGG - tig0022248:52351-52370 None:intergenic 35.0%
! AGTTCAATCTAGCCCTTTTA+AGG - tig0022248:52352-52371 None:intergenic 35.0%
TGAGAGTGAAGAATCAGAAA+GGG - tig0022248:52471-52490 None:intergenic 35.0%
TTGAGAGTGAAGAATCAGAA+AGG - tig0022248:52472-52491 None:intergenic 35.0%
ACCCAAATGTTGTCTATGAA+AGG - tig0022248:52585-52604 None:intergenic 35.0%
AAATCAATCCAATGAGTCAC+TGG + tig0022248:52817-52836 Msa1398340:CDS 35.0%
GAATGATATCCTCTCGTTAA+AGG + tig0022248:52862-52881 Msa1398340:CDS 35.0%
! TCACCAGAACCAAATTTTAG+AGG + tig0022248:52925-52944 Msa1398340:CDS 35.0%
!! TTGCCTCTAAAATTTGGTTC+TGG - tig0022248:52931-52950 None:intergenic 35.0%
!! CATGAAGATGGTCATTTTCT+AGG - tig0022248:53096-53115 None:intergenic 35.0%
CAGAACTAAATTTGATGTGC+TGG + tig0022248:53153-53172 Msa1398340:CDS 35.0%
AAACAAGCAGAACTACTACA+AGG - tig0022248:53277-53296 None:intergenic 35.0%
! TTGTAGTAGTTCTGCTTGTT+TGG + tig0022248:53276-53295 Msa1398340:CDS 35.0%
! AGCAACGTAATGCTTTTGAT+AGG + tig0022248:53347-53366 Msa1398340:CDS 35.0%
CTTGTCATGAAACAGAAGTT+TGG + tig0022248:53457-53476 Msa1398340:CDS 35.0%
!!! GTCTAGTTTTGATCATTTGG+AGG + tig0022248:53627-53646 Msa1398340:CDS 35.0%
TTGACTAAGATCCTGATTTC+GGG - tig0022248:53674-53693 None:intergenic 35.0%
CTTGACTAAGATCCTGATTT+CGG - tig0022248:53675-53694 None:intergenic 35.0%
AAACAACTTGTCTTCTCTAC+AGG + tig0022248:53846-53865 Msa1398340:CDS 35.0%
AAAACAACTTGTGTTCTCTG+CGG + tig0022248:54013-54032 Msa1398340:CDS 35.0%
AAAATTGGAGACAACAGTCA+TGG + tig0022248:54068-54087 Msa1398340:CDS 35.0%
CAGTTCTTGTCTGTTCATAT+CGG - tig0022248:54307-54326 None:intergenic 35.0%
ACGTCTTGAAGATGCTTTAA+AGG + tig0022248:54404-54423 Msa1398340:CDS 35.0%
! CTACTTAAAATCTGAGTTGG+AGG + tig0022248:54686-54705 Msa1398340:CDS 35.0%
! TTTGACTTTGGCTTCTTCAT+TGG - tig0022248:54904-54923 None:intergenic 35.0%
AGTCAAATGTATAGTTCTCC+AGG + tig0022248:54917-54936 Msa1398340:CDS 35.0%
GTCAAATGTATAGTTCTCCA+GGG + tig0022248:54918-54937 Msa1398340:CDS 35.0%
TCATGGTAAGCTCATTACAT+TGG - tig0022248:55016-55035 None:intergenic 35.0%
AATGTAATGAGCTTACCATG+AGG + tig0022248:55015-55034 Msa1398340:CDS 35.0%
AATGAAGATCTTGGAATTGG+AGG + tig0022248:55361-55380 Msa1398340:CDS 35.0%
TTCTTGCTTGCAACATTCAA+GGG - tig0022248:55474-55493 None:intergenic 35.0%
TTTCTTGCTTGCAACATTCA+AGG - tig0022248:55475-55494 None:intergenic 35.0%
!! AGTAGAGGTTACTGTTTTGA+AGG + tig0022248:55550-55569 Msa1398340:CDS 35.0%
ATAAAACAGTCAGTTACCTC+TGG - tig0022248:55722-55741 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG - tig0022248:55828-55847 None:intergenic 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG + tig0022248:55832-55851 Msa1398340:intron 35.0%
! ACATTCTCTAGAGGAAGAAT+GGG + tig0022248:56140-56159 Msa1398340:intron 35.0%
! AGGAACATGTGATGAAGTTT+TGG + tig0022248:56330-56349 Msa1398340:intron 35.0%
GGCAAATGGTAAAGAAAACA+AGG - tig0022248:56374-56393 None:intergenic 35.0%
GACTAGGTTTGAGAACAAAT+GGG - tig0022248:56404-56423 None:intergenic 35.0%
AGACTAGGTTTGAGAACAAA+TGG - tig0022248:56405-56424 None:intergenic 35.0%
CACTCAGGATTAATAAAGGA+AGG - tig0022248:56488-56507 None:intergenic 35.0%
CTTCCTTTATTAATCCTGAG+TGG + tig0022248:56486-56505 Msa1398340:intron 35.0%
TTGCCACTCAGGATTAATAA+AGG - tig0022248:56492-56511 None:intergenic 35.0%
CATAACTGTTTGATAGGATC+AGG + tig0022248:56530-56549 Msa1398340:intron 35.0%
TTCGTAACTCTAAATGCAAG+AGG - tig0022248:56558-56577 None:intergenic 35.0%
! CTTGCATTTAGAGTTACGAA+TGG + tig0022248:56558-56577 Msa1398340:CDS 35.0%
!! GCTCTTTATTTCTGATAACC+TGG + tig0022248:56795-56814 Msa1398340:intron 35.0%
! TTTTGTTCTCTGTTTGCAGT+TGG + tig0022248:56869-56888 Msa1398340:intron 35.0%
!! GAAGAATGTACCTCTGAAAT+TGG - tig0022248:57201-57220 None:intergenic 35.0%
TTTCAGCATGAAACTGAAGT+GGG - tig0022248:57584-57603 None:intergenic 35.0%
! TTTTCAGCATGAAACTGAAG+TGG - tig0022248:57585-57604 None:intergenic 35.0%
AGTTTCATGCTGAAAATGTG+TGG + tig0022248:57589-57608 Msa1398340:intron 35.0%
TAAGAATGGATGTAATACGG+TGG + tig0022248:57716-57735 Msa1398340:intron 35.0%
GTAGGTATTTGTCATGTCTA+TGG - tig0022248:57785-57804 None:intergenic 35.0%
AACACTCCAAAACAATGAGT+AGG - tig0022248:57803-57822 None:intergenic 35.0%
TCTCAAACATTGTGGTTGAA+TGG - tig0022248:57996-58015 None:intergenic 35.0%
AAGCAGTATTCAGAAGTTTC+AGG + tig0022248:58068-58087 Msa1398340:CDS 35.0%
AGCAGTATTCAGAAGTTTCA+GGG + tig0022248:58069-58088 Msa1398340:CDS 35.0%
AAAGACAAGACATTCTTCCA+TGG + tig0022248:58126-58145 Msa1398340:CDS 35.0%
GAAGGCTTAATTGAGAGTAA+CGG - tig0022248:58177-58196 None:intergenic 35.0%
!!! GGGTTCTGAGTAGTTTCTTT+TGG + tig0022248:46952-46971 Msa1398340:five_prime_UTR 40.0%
!! CTGAGTAGTTTCTTTTGGGT+TGG + tig0022248:46957-46976 Msa1398340:five_prime_UTR 40.0%
GAAGAGATTTGGAAAATGGG+TGG - tig0022248:47045-47064 None:intergenic 40.0%
TTGGAGCTGAGGATGAAAAT+GGG + tig0022248:47630-47649 Msa1398340:five_prime_UTR 40.0%
CATGTGTAGCATGGAATTGA+AGG - tig0022248:47766-47785 None:intergenic 40.0%
CAATCTTCTGTGTTTGACAC+TGG + tig0022248:48324-48343 Msa1398340:intron 40.0%
CTGCTTCAGTCTGCTAAATT+TGG - tig0022248:48436-48455 None:intergenic 40.0%
AGCAGACTGAAGCAGTTATT+AGG + tig0022248:48441-48460 Msa1398340:intron 40.0%
! TGGAATAGCTAGTTTGGAAC+TGG + tig0022248:48529-48548 Msa1398340:intron 40.0%
! ATAGCTAGTTTGGAACTGGT+AGG + tig0022248:48533-48552 Msa1398340:intron 40.0%
AGTAGGGACTCTATTGTGAA+GGG + tig0022248:48708-48727 Msa1398340:intron 40.0%
TGAGAGAAATCTATCCTCCA+AGG - tig0022248:48740-48759 None:intergenic 40.0%
AACCAATTCATCTTTGTCGC+CGG + tig0022248:48824-48843 Msa1398340:intron 40.0%
TGTTTCCACCATTCAAACAC+CGG - tig0022248:48846-48865 None:intergenic 40.0%
! CTCGAATTCTTTTTCCTCCA+AGG - tig0022248:48900-48919 None:intergenic 40.0%
TCTGATACCCTAGTTAGAGA+TGG + tig0022248:48938-48957 Msa1398340:intron 40.0%
TAGCTAACGAGTCAGTTAAG+GGG - tig0022248:49017-49036 None:intergenic 40.0%
! CCAAGGTATCACCCAAAAAA+GGG - tig0022248:49270-49289 None:intergenic 40.0%
! TCCAAGGTATCACCCAAAAA+AGG - tig0022248:49271-49290 None:intergenic 40.0%
TCTAGATTCCACAATCTGGA+TGG + tig0022248:49520-49539 Msa1398340:intron 40.0%
CTAGATTCCACAATCTGGAT+GGG + tig0022248:49521-49540 Msa1398340:intron 40.0%
AGTTTATCCCATCCAGATTG+TGG - tig0022248:49531-49550 None:intergenic 40.0%
TGAGAAATGGAACTTGCAAG+TGG + tig0022248:49613-49632 Msa1398340:CDS 40.0%
!! TTACAAACTTGTTGTGGGGA+TGG + tig0022248:49704-49723 Msa1398340:CDS 40.0%
CATAACAACTTTGTTGCTGC+CGG + tig0022248:50107-50126 Msa1398340:intron 40.0%
TAAGCATTTCTAATGGTGGC+CGG - tig0022248:50129-50148 None:intergenic 40.0%
! TGTAGCAATAGTCTTGAGAG+AGG + tig0022248:50181-50200 Msa1398340:intron 40.0%
TCTTCAAGATCTAGCATCCT+TGG + tig0022248:50248-50267 Msa1398340:CDS 40.0%
AGGAATGAAAGGGTAAACAC+AGG - tig0022248:50410-50429 None:intergenic 40.0%
! TCTTCTCATTGTTTGAAGCC+AGG + tig0022248:50570-50589 Msa1398340:intron 40.0%
TTAGAGAATTCGAACAGCAG+AGG + tig0022248:50705-50724 Msa1398340:intron 40.0%
TAGAGAATTCGAACAGCAGA+GGG + tig0022248:50706-50725 Msa1398340:intron 40.0%
CAGATTCATCATGACTACCT+TGG - tig0022248:50766-50785 None:intergenic 40.0%
GGAGAATTAGTCATGGATGT+TGG + tig0022248:50949-50968 Msa1398340:intron 40.0%
! AGTCTTAAAAGCACAGTGTC+TGG + tig0022248:51195-51214 Msa1398340:CDS 40.0%
TGTAGCAGTAGCAGTCTTAA+AGG + tig0022248:51369-51388 Msa1398340:CDS 40.0%
ATTGCTGCTGAGATATCATC+AGG + tig0022248:51501-51520 Msa1398340:CDS 40.0%
! GAGAGTAGTTGAGATTTTGC+AGG + tig0022248:51788-51807 Msa1398340:CDS 40.0%
GAATCTAGCGATCCAATTTC+AGG + tig0022248:51822-51841 Msa1398340:CDS 40.0%
TCAGGGACTAAAGTTGTGAA+CGG + tig0022248:51840-51859 Msa1398340:CDS 40.0%
TGCGAAGATGGAGTTACAAA+TGG + tig0022248:51872-51891 Msa1398340:CDS 40.0%
GGGTTGAAATAAAGCAGCAT+CGG - tig0022248:51925-51944 None:intergenic 40.0%
AATCAAACTCATGAGCCACA+AGG - tig0022248:51980-51999 None:intergenic 40.0%
GAGTCCAAAACTGAAAGAGA+AGG + tig0022248:52059-52078 Msa1398340:CDS 40.0%
! CTGAAAGAGAAGGCTTTGTA+CGG + tig0022248:52069-52088 Msa1398340:CDS 40.0%
! AGAAGGCTTTGTACGGAAAA+TGG + tig0022248:52076-52095 Msa1398340:CDS 40.0%
TTCTGCTGGTAAGAACGAAA+TGG + tig0022248:52214-52233 Msa1398340:CDS 40.0%
!! TTCTGAAGATAGGCGCATTT+TGG + tig0022248:52277-52296 Msa1398340:CDS 40.0%
TCTTGAACTTCTTTCTTGCC+AGG + tig0022248:52403-52422 Msa1398340:CDS 40.0%
TCTCATGCATAGAAAGAACC+TGG - tig0022248:52424-52443 None:intergenic 40.0%
TCTTCACTCTCAAACACTGA+TGG + tig0022248:52479-52498 Msa1398340:CDS 40.0%
AAGATCACTTCGATTGCAAG+AGG + tig0022248:52631-52650 Msa1398340:CDS 40.0%
AGATCACTTCGATTGCAAGA+GGG + tig0022248:52632-52651 Msa1398340:CDS 40.0%
TGAAGCCAGTCTTAACATTC+AGG + tig0022248:52748-52767 Msa1398340:CDS 40.0%
GAAACTTGAGTCAGATCTTG+AGG + tig0022248:53534-53553 Msa1398340:CDS 40.0%
CTTGTTGAAAAGATGAGTGC+TGG + tig0022248:53559-53578 Msa1398340:CDS 40.0%
TACAGAGGAGAAGAAAGCTT+TGG + tig0022248:53759-53778 Msa1398340:CDS 40.0%
! CAGATTCTTCTGTTTTGTCC+TGG - tig0022248:53795-53814 None:intergenic 40.0%
TGCGCGATGAAAAGAATTTC+AGG + tig0022248:53875-53894 Msa1398340:CDS 40.0%
GCGCGATGAAAAGAATTTCA+GGG + tig0022248:53876-53895 Msa1398340:CDS 40.0%
CGATATGAACAGACAAGAAC+TGG + tig0022248:54305-54324 Msa1398340:CDS 40.0%
ACCTTAAGGAACACAAGAGT+AGG + tig0022248:54763-54782 Msa1398340:CDS 40.0%
TCCTACTCTTGTGTTCCTTA+AGG - tig0022248:54767-54786 None:intergenic 40.0%
TATAGTTCTCCAGGGAAAAC+TGG + tig0022248:54926-54945 Msa1398340:CDS 40.0%
TGAACAGGTTCTTAAGACAG+AGG + tig0022248:55043-55062 Msa1398340:CDS 40.0%
CTTAATGCTCGTGACAAAAG+AGG + tig0022248:55125-55144 Msa1398340:CDS 40.0%
GGGAATGAAGATCTTGGAAT+TGG + tig0022248:55358-55377 Msa1398340:CDS 40.0%
TGACCTGTTAAAGGCTGAAA+AGG + tig0022248:55433-55452 Msa1398340:CDS 40.0%
! ACTCCTTTTCAGCCTTTAAC+AGG - tig0022248:55439-55458 None:intergenic 40.0%
TTCTCTTCAGAAATGCAGTG+AGG + tig0022248:55511-55530 Msa1398340:CDS 40.0%
! AATGTTCTGAATGAGGGCAA+TGG + tig0022248:55602-55621 Msa1398340:CDS 40.0%
AGGATTGAATTTGCACTCTC+TGG - tig0022248:55689-55708 None:intergenic 40.0%
TCGCAACTTCGTGAAAGTTA+GGG - tig0022248:56010-56029 None:intergenic 40.0%
ATCGCAACTTCGTGAAAGTT+AGG - tig0022248:56009-56028 None:intergenic 40.0%
! CTTTCACGAAGTTGCGATTT+TGG + tig0022248:55772-55791 Msa1398340:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG - tig0022248:55826-55845 None:intergenic 40.0%
GCTACAGTTGCAAAACTTAG+GGG - tig0022248:55827-55846 None:intergenic 40.0%
CTGCTACAGTTGCAAAACTT+AGG - tig0022248:55829-55848 None:intergenic 40.0%
! AGACGAGTCAAAATTGGCTT+TGG + tig0022248:55918-55937 Msa1398340:intron 40.0%
!! GACGAGTCAAAATTGGCTTT+GGG + tig0022248:55919-55938 Msa1398340:intron 40.0%
!! ACGAGTCAAAATTGGCTTTG+GGG + tig0022248:55920-55939 Msa1398340:intron 40.0%
! TTTTGCACATGTGGCAGTTT+TGG - tig0022248:55947-55966 None:intergenic 40.0%
TGCCACATGTGCAAAACTTA+GGG + tig0022248:55951-55970 Msa1398340:intron 40.0%
ATCGCAACTTCGTGAAAGTT+AGG + tig0022248:56009-56028 Msa1398340:intron 40.0%
TCGCAACTTCGTGAAAGTTA+GGG + tig0022248:56010-56029 Msa1398340:intron 40.0%
! GACATTCTCTAGAGGAAGAA+TGG + tig0022248:56139-56158 Msa1398340:intron 40.0%
! CATTCTCTAGAGGAAGAATG+GGG + tig0022248:56141-56160 Msa1398340:intron 40.0%
!!! AGTTTTTAGAGTTCGAACCC+TGG + tig0022248:56258-56277 Msa1398340:intron 40.0%
! AGTTCTAGCTAAAAGGTCCA+GGG - tig0022248:56278-56297 None:intergenic 40.0%
! AAGTTCTAGCTAAAAGGTCC+AGG - tig0022248:56279-56298 None:intergenic 40.0%
AAATGAAGAAAGCAAGCACC+TGG + tig0022248:56617-56636 Msa1398340:CDS 40.0%
TCAAACTTTGAGCTAAAGCC+AGG - tig0022248:56638-56657 None:intergenic 40.0%
! TAGCATTGAGCACCTGAATA+AGG + tig0022248:56662-56681 Msa1398340:CDS 40.0%
TTCTCTGTTTGCAGTTGGAA+AGG + tig0022248:56874-56893 Msa1398340:intron 40.0%
!! TGGCTTTGACAATCTTCAGT+AGG - tig0022248:56921-56940 None:intergenic 40.0%
AGAACTGACACAGTTACATG+AGG + tig0022248:56968-56987 Msa1398340:CDS 40.0%
CATGCTTCCTAACTCTTGAT+TGG - tig0022248:57071-57090 None:intergenic 40.0%
TCAGTGGCAATGCATTAGAA+AGG + tig0022248:57116-57135 Msa1398340:CDS 40.0%
CAGTGGCAATGCATTAGAAA+GGG + tig0022248:57117-57136 Msa1398340:CDS 40.0%
!! ATTAGAAAGGGTGCTTGCTT+TGG + tig0022248:57129-57148 Msa1398340:CDS 40.0%
AGTCTAGCATCCAATTTCAG+AGG + tig0022248:57188-57207 Msa1398340:CDS 40.0%
TTCAGCATGAAACTGAAGTG+GGG - tig0022248:57583-57602 None:intergenic 40.0%
TGTGGAACACCAAAACCAAT+TGG + tig0022248:57607-57626 Msa1398340:intron 40.0%
! TTGGAGTGTTTCTTTCTGAC+TGG + tig0022248:57813-57832 Msa1398340:intron 40.0%
TCGTGAAAGAACTGGAACAT+TGG - tig0022248:58030-58049 None:intergenic 40.0%
TTCCATGGAGACAGAACTAA+AGG + tig0022248:58141-58160 Msa1398340:CDS 40.0%
TCAATTAAGCCTTCAGTTCG+CGG + tig0022248:58183-58202 Msa1398340:CDS 40.0%
GAATACTCGAGCATCCAAAA+TGG + tig0022248:58246-58265 Msa1398340:CDS 40.0%
!! TAAGGAATGGTCTCTGAAGT+AGG - tig0022248:58287-58306 None:intergenic 40.0%
AAAAAAATGGTGCCCTAGTG+CGG - tig0022248:58313-58332 None:intergenic 40.0%
! TATAAGATATAATGGGGCCG+CGG - tig0022248:58390-58409 None:intergenic 40.0%
ACAATTACAACACTCAGGGA+TGG - tig0022248:58606-58625 None:intergenic 40.0%
GAAAATGGGTGGGAGAAAGA+TGG - tig0022248:47034-47053 None:intergenic 45.0%
AGATCAGTAGGGTCCTAAGT+TGG + tig0022248:47411-47430 Msa1398340:intron 45.0%
! TTAGCTTAGTGTTGGAGCTG+AGG + tig0022248:47619-47638 Msa1398340:five_prime_UTR 45.0%
GTTGGAGCTGAGGATGAAAA+TGG + tig0022248:47629-47648 Msa1398340:five_prime_UTR 45.0%
ATGAATTGTGCAGTGCACAC+TGG - tig0022248:47932-47951 None:intergenic 45.0%
GAGTAGGGACTCTATTGTGA+AGG + tig0022248:48707-48726 Msa1398340:intron 45.0%
GTAGGGACTCTATTGTGAAG+GGG + tig0022248:48709-48728 Msa1398340:intron 45.0%
TAGGGACTCTATTGTGAAGG+GGG + tig0022248:48710-48729 Msa1398340:intron 45.0%
!! TTAGTTGGTGACTGAGCATG+AGG - tig0022248:48804-48823 None:intergenic 45.0%
GAAACAGAAGCCAAGAACGA+TGG + tig0022248:48860-48879 Msa1398340:intron 45.0%
AGCTAACGAGTCAGTTAAGG+GGG - tig0022248:49016-49035 None:intergenic 45.0%
!!! CCCTTTTTTGGGTGATACCT+TGG + tig0022248:49267-49286 Msa1398340:intron 45.0%
GGTCTCTAGATTCCACAATC+TGG + tig0022248:49516-49535 Msa1398340:intron 45.0%
GAAGAGCCCTGAATTGGTTA+AGG - tig0022248:50233-50252 None:intergenic 45.0%
GATCTTGAAGAGCCCTGAAT+TGG - tig0022248:50239-50258 None:intergenic 45.0%
AAGATCTAGCATCCTTGGTG+AGG + tig0022248:50253-50272 Msa1398340:CDS 45.0%
!! GCTGTTGCTTTGCCTCTTAA+CGG + tig0022248:50320-50339 Msa1398340:CDS 45.0%
CAGCTTCTCACTTCCAAAAC+TGG + tig0022248:50601-50620 Msa1398340:CDS 45.0%
CTACAAACAACCTCTGACCA+AGG + tig0022248:50746-50765 Msa1398340:CDS 45.0%
ATCATGACTACCTTGGTCAG+AGG - tig0022248:50759-50778 None:intergenic 45.0%
! CTTCGAGTGAAGAAGTACGA+GGG - tig0022248:51065-51084 None:intergenic 45.0%
CTTCACTCGAAGGAGAATCA+AGG + tig0022248:51073-51092 Msa1398340:CDS 45.0%
GAAGCATGATACGCATGAAG+TGG + tig0022248:51170-51189 Msa1398340:CDS 45.0%
AGCACAGTGTCTGGTGATTT+AGG + tig0022248:51204-51223 Msa1398340:CDS 45.0%
! TGTGGTGGAAACTGATTGTC+AGG - tig0022248:51276-51295 None:intergenic 45.0%
TGACAATCAGTTTCCACCAC+AGG + tig0022248:51275-51294 Msa1398340:CDS 45.0%
ACTGCTACTGCTACAGTCTT+CGG - tig0022248:51364-51383 None:intergenic 45.0%
AGGAGAAGAGCTAGCAAAAG+AGG + tig0022248:51521-51540 Msa1398340:CDS 45.0%
AGAGCTAGCAAAAGAGGTTG+CGG + tig0022248:51527-51546 Msa1398340:CDS 45.0%
CGGAAGAGAAAATGCGAAGA+TGG + tig0022248:51860-51879 Msa1398340:CDS 45.0%
AGATAACGAGCCATGCTTTC+GGG - tig0022248:51945-51964 None:intergenic 45.0%
GAGATAACGAGCCATGCTTT+CGG - tig0022248:51946-51965 None:intergenic 45.0%
TTCTCCTTCATAGCAAGGGT+GGG - tig0022248:52011-52030 None:intergenic 45.0%
TTTCTCCTTCATAGCAAGGG+TGG - tig0022248:52012-52031 None:intergenic 45.0%
TGTACGGAAAATGGACCAGA+TGG + tig0022248:52085-52104 Msa1398340:CDS 45.0%
CTTCATAGTAGCACTCCATC+TGG - tig0022248:52103-52122 None:intergenic 45.0%
GCAGAATCAAAGGCAGATGA+TGG + tig0022248:52142-52161 Msa1398340:CDS 45.0%
TGCAGAAGCAGCCCTTAAAA+GGG + tig0022248:52337-52356 Msa1398340:CDS 45.0%
GTGAAGAATCAGAAAGGGTC+TGG - tig0022248:52466-52485 None:intergenic 45.0%
GATCACTTCGATTGCAAGAG+GGG + tig0022248:52633-52652 Msa1398340:CDS 45.0%
GCAAGAGGGGTTATACAAAC+AGG + tig0022248:52646-52665 Msa1398340:CDS 45.0%
TGTGGCCTGAATGTTAAGAC+TGG - tig0022248:52756-52775 None:intergenic 45.0%
ATTTCAACTCTCTAGGCAGC+TGG + tig0022248:52787-52806 Msa1398340:CDS 45.0%
CCTAAGAACCAGTGACTCAT+TGG - tig0022248:52828-52847 None:intergenic 45.0%
!! CCAATGAGTCACTGGTTCTT+AGG + tig0022248:52825-52844 Msa1398340:CDS 45.0%
CCTTGTACTCCTTTAACGAG+AGG - tig0022248:52874-52893 None:intergenic 45.0%
! CCTCTCGTTAAAGGAGTACA+AGG + tig0022248:52871-52890 Msa1398340:CDS 45.0%
TGGGCATGATTTACAGCAGA+TGG + tig0022248:53477-53496 Msa1398340:CDS 45.0%
CTGACTCAAGTTTCTGCAAC+TGG - tig0022248:53528-53547 None:intergenic 45.0%
GCAACTGAATTCCCGAAATC+AGG + tig0022248:53660-53679 Msa1398340:CDS 45.0%
GACCTTAGCAGCAATTACAG+AGG + tig0022248:53744-53763 Msa1398340:CDS 45.0%
CTCCTCTGTAATTGCTGCTA+AGG - tig0022248:53749-53768 None:intergenic 45.0%
TGAAAAACAACAGCAGCTGC+AGG + tig0022248:53942-53961 Msa1398340:CDS 45.0%
TGAAAAGCAACACAAGCTGC+AGG + tig0022248:54278-54297 Msa1398340:CDS 45.0%
TGTACCAGAGCTCAGTTTGA+GGG + tig0022248:54507-54526 Msa1398340:CDS 45.0%
TGTGGCAACATCAGACCTTA+AGG + tig0022248:54749-54768 Msa1398340:CDS 45.0%
! TGAAAGAGAGTGTGAGCTTG+AGG + tig0022248:54818-54837 Msa1398340:CDS 45.0%
!! TGGAAAGTGTCAGCAGAGAT+GGG + tig0022248:54862-54881 Msa1398340:CDS 45.0%
! TCAGTTCATCCAGTTTTCCC+TGG - tig0022248:54938-54957 None:intergenic 45.0%
TACCATGAGGCTTTCTGAAC+AGG + tig0022248:55028-55047 Msa1398340:CDS 45.0%
AACCTGTTCAGAAAGCCTCA+TGG - tig0022248:55033-55052 None:intergenic 45.0%
CGTGACAAAAGAGGACATGA+AGG + tig0022248:55134-55153 Msa1398340:CDS 45.0%
AGCATAGTGAGGAAATGCTG+TGG + tig0022248:55258-55277 Msa1398340:CDS 45.0%
AGAGCTGGGAATGAAGATCT+TGG + tig0022248:55352-55371 Msa1398340:CDS 45.0%
AATCCTCAATATGCAGCCAG+AGG + tig0022248:55703-55722 Msa1398340:CDS 45.0%
TTACCTCTGGCTGCATATTG+AGG - tig0022248:55709-55728 None:intergenic 45.0%
GCAACTTCGTGAAAGTTAGG+GGG - tig0022248:56012-56031 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG - tig0022248:56011-56030 None:intergenic 45.0%
CAGCGTAGACGAGTCAAAAT+TGG + tig0022248:55912-55931 Msa1398340:intron 45.0%
!! CGAGTCAAAATTGGCTTTGG+GGG + tig0022248:55921-55940 Msa1398340:intron 45.0%
CTGCCACATGTGCAAAACTT+AGG + tig0022248:55950-55969 Msa1398340:intron 45.0%
GCCACATGTGCAAAACTTAG+GGG + tig0022248:55952-55971 Msa1398340:intron 45.0%
CCACATGTGCAAAACTTAGG+GGG + tig0022248:55953-55972 Msa1398340:intron 45.0%
CTTTCACGAAGTTGCGATTC+TGG - tig0022248:56007-56026 None:intergenic 45.0%
CGCAACTTCGTGAAAGTTAG+GGG + tig0022248:56011-56030 Msa1398340:intron 45.0%
GCAACTTCGTGAAAGTTAGG+GGG + tig0022248:56012-56031 Msa1398340:intron 45.0%
CTTCGTACGACATTCTCTAG+AGG + tig0022248:56131-56150 Msa1398340:intron 45.0%
!! TAGCAAACAGCTGAGTTGGT+GGG - tig0022248:56311-56330 None:intergenic 45.0%
TTCCTAGCAAACAGCTGAGT+TGG - tig0022248:56315-56334 None:intergenic 45.0%
TACGAATGGATGCCAAACTC+TGG + tig0022248:56572-56591 Msa1398340:CDS 45.0%
ACGAATGGATGCCAAACTCT+GGG + tig0022248:56573-56592 Msa1398340:CDS 45.0%
CATTGAGCACCTGAATAAGG+AGG + tig0022248:56665-56684 Msa1398340:CDS 45.0%
ATAGTAGCAACTGAAGGACC+AGG - tig0022248:56816-56835 None:intergenic 45.0%
! AGCCATGAGACAAGTTTTCC+AGG + tig0022248:56936-56955 Msa1398340:CDS 45.0%
GACCTGGAAAACTTGTCTCA+TGG - tig0022248:56941-56960 None:intergenic 45.0%
GATCAGGCCAATCAAGAGTT+AGG + tig0022248:57061-57080 Msa1398340:intron 45.0%
TTGGATGCTAGACTTCTTCC+TGG - tig0022248:57182-57201 None:intergenic 45.0%
TCAGCATGAAACTGAAGTGG+GGG - tig0022248:57582-57601 None:intergenic 45.0%
!! GTGTTGCTTCGTGAAAGAAC+TGG - tig0022248:58038-58057 None:intergenic 45.0%
!! CTCCTTTAGTTCTGTCTCCA+TGG - tig0022248:58146-58165 None:intergenic 45.0%
!! CGGAGAATTTGGAGCCATTT+TGG - tig0022248:58263-58282 None:intergenic 45.0%
CTGAAGTAGGTCGGAGAATT+TGG - tig0022248:58274-58293 None:intergenic 45.0%
!! GAATGGTCTCTGAAGTAGGT+CGG - tig0022248:58283-58302 None:intergenic 45.0%
AAAAAATGGTGCCCTAGTGC+GGG - tig0022248:58312-58331 None:intergenic 45.0%
!! TTTAGTTTGCCACCTTGCAC+AGG + tig0022248:58330-58349 Msa1398340:three_prime_UTR 45.0%
! ATGGATTATTGGCCTGTGCA+AGG - tig0022248:58345-58364 None:intergenic 45.0%
!! TTAAATAAATTAATTAATCA+TGG - tig0022248:49317-49336 None:intergenic 5.0%
!!! AATGTTTTATAAAAATAAAT+AGG - tig0022248:56055-56074 None:intergenic 5.0%
! GACAAACTTTTCAGTGGCCG+TGG + tig0022248:48238-48257 Msa1398340:intron 50.0%
ATTGTGAAGGGGGAAAGCCT+TGG + tig0022248:48720-48739 Msa1398340:intron 50.0%
CACCGGCGACAAAGATGAAT+TGG - tig0022248:48829-48848 None:intergenic 50.0%
CTTTGTCGCCGGTGTTTGAA+TGG + tig0022248:48835-48854 Msa1398340:intron 50.0%
ACTAGACTCGCCATCGTTCT+TGG - tig0022248:48873-48892 None:intergenic 50.0%
! TCTTTCATCCCAGCTGACTC+TGG + tig0022248:49558-49577 Msa1398340:CDS 50.0%
! CTTTCATCCCAGCTGACTCT+GGG + tig0022248:49559-49578 Msa1398340:CDS 50.0%
TAACCTTCCCAGAGTCAGCT+GGG - tig0022248:49569-49588 None:intergenic 50.0%
! GATCTATGTTGGCCTCACCA+AGG - tig0022248:50268-50287 None:intergenic 50.0%
AGAGGCAAAGCAACAGCTGT+AGG - tig0022248:50317-50336 None:intergenic 50.0%
CTCACATGTAGTGTGACTCC+AGG - tig0022248:50353-50372 None:intergenic 50.0%
CTGGAGTCACACTACATGTG+AGG + tig0022248:50351-50370 Msa1398340:intron 50.0%
CAGAGGGAACTCAGAGAGAA+GGG + tig0022248:50722-50741 Msa1398340:CDS 50.0%
AGTACGCTTGTGAGGAGAGA+AGG - tig0022248:50850-50869 None:intergenic 50.0%
! CCTTCGAGTGAAGAAGTACG+AGG - tig0022248:51066-51085 None:intergenic 50.0%
CCTCGTACTTCTTCACTCGA+AGG + tig0022248:51063-51082 Msa1398340:CDS 50.0%
!! GATTATGCTGACTCAGCTGC+TGG + tig0022248:51105-51124 Msa1398340:CDS 50.0%
GACTCAGCTGCTGGATTTGA+TGG + tig0022248:51114-51133 Msa1398340:CDS 50.0%
CAAAGTCCTCAGCGAGAGAA+AGG + tig0022248:51243-51262 Msa1398340:CDS 50.0%
TTCCACCACAGGACAATGCT+TGG + tig0022248:51286-51305 Msa1398340:CDS 50.0%
TCCACCACAGGACAATGCTT+GGG + tig0022248:51287-51306 Msa1398340:CDS 50.0%
ACAATGCTTGGGCACATGGT+TGG + tig0022248:51298-51317 Msa1398340:CDS 50.0%
TCGCAGTGAACCTACTGAGA+CGG + tig0022248:51626-51645 Msa1398340:CDS 50.0%
TGAACCTACTGAGACGGAGA+GGG + tig0022248:51632-51651 Msa1398340:CDS 50.0%
! GCATAAGGGGCTTTTGCTCA+TGG + tig0022248:51686-51705 Msa1398340:CDS 50.0%
! AGATCCCACCCTTGCTATGA+AGG + tig0022248:52004-52023 Msa1398340:CDS 50.0%
! CGAACTTCTAAGGGAGCTAG+AGG + tig0022248:52037-52056 Msa1398340:CDS 50.0%
! TGGTTGAGTTGCAGAACCTC+AGG + tig0022248:52162-52181 Msa1398340:CDS 50.0%
CTGCAGAAGCAGCCCTTAAA+AGG + tig0022248:52336-52355 Msa1398340:CDS 50.0%
!! AGCTTTGGAGTTGTCTCTCC+AGG + tig0022248:53774-53793 Msa1398340:CDS 50.0%
TGAAAAGCAACACCAGCTGC+AGG + tig0022248:54110-54129 Msa1398340:CDS 50.0%
! CTTCTGTTTTGTCCTGCAGC+TGG - tig0022248:53957-53976 None:intergenic 50.0%
ACTGGTCCATCTCAAGCAAC+TGG + tig0022248:54323-54342 Msa1398340:CDS 50.0%
CTGTCACCAGTTGCTTGAGA+TGG - tig0022248:54332-54351 None:intergenic 50.0%
CAAGCAACTGGTGACAGACT+TGG + tig0022248:54335-54354 Msa1398340:CDS 50.0%
! CTCAAACTGAGCTCTGGTAC+AGG - tig0022248:54508-54527 None:intergenic 50.0%
CTGTACCAGAGCTCAGTTTG+AGG + tig0022248:54506-54525 Msa1398340:CDS 50.0%
ATGACCCTCAAACTGAGCTC+TGG - tig0022248:54514-54533 None:intergenic 50.0%
AGCTCAGTTTGAGGGTCATG+TGG + tig0022248:54515-54534 Msa1398340:CDS 50.0%
TCAGTTTGAGGGTCATGTGG+AGG + tig0022248:54518-54537 Msa1398340:CDS 50.0%
AGTGTGAGCTTGAGGTTGCA+AGG + tig0022248:54826-54845 Msa1398340:CDS 50.0%
!! CTGGAAAGTGTCAGCAGAGA+TGG + tig0022248:54861-54880 Msa1398340:CDS 50.0%
!! GGAAAGTGTCAGCAGAGATG+GGG + tig0022248:54863-54882 Msa1398340:CDS 50.0%
AAGAGGACATGAAGGACCAC+CGG + tig0022248:55142-55161 Msa1398340:CDS 50.0%
GGAATTGGAGGCTGAGTTAC+AGG + tig0022248:55373-55392 Msa1398340:CDS 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - tig0022248:55823-55842 None:intergenic 50.0%
! CCCCCTAAGTTTTGCACATG+TGG - tig0022248:55956-55975 None:intergenic 50.0%
CATGTGCAAAACTTAGGGGG+CGG + tig0022248:55956-55975 Msa1398340:intron 50.0%
! CTAGCAAACAGCTGAGTTGG+TGG - tig0022248:56312-56331 None:intergenic 50.0%
CACCAACTCAGCTGTTTGCT+AGG + tig0022248:56310-56329 Msa1398340:intron 50.0%
ATTGTCAAGGCTTGCCACTC+AGG - tig0022248:56503-56522 None:intergenic 50.0%
CCTCTTCAGTTCCCAGAGTT+TGG - tig0022248:56587-56606 None:intergenic 50.0%
! CCAAACTCTGGGAACTGAAG+AGG + tig0022248:56584-56603 Msa1398340:CDS 50.0%
GTCAGTTCTCTTTGCAGACC+TGG - tig0022248:56957-56976 None:intergenic 50.0%
!! TTGCTGAAGCATTGCAAGCC+AGG + tig0022248:57161-57180 Msa1398340:CDS 50.0%
CTTCAACTTCCGCGAACTGA+AGG - tig0022248:58195-58214 None:intergenic 50.0%
CTTCAGTTCGCGGAAGTTGA+AGG + tig0022248:58193-58212 Msa1398340:CDS 50.0%
CATTCCTTATCCCCGCACTA+GGG + tig0022248:58298-58317 Msa1398340:CDS 50.0%
AAAAATGGTGCCCTAGTGCG+GGG - tig0022248:58311-58330 None:intergenic 50.0%
! GATTATTGGCCTGTGCAAGG+TGG - tig0022248:58342-58361 None:intergenic 50.0%
TGTCGCCGGTGTTTGAATGG+TGG + tig0022248:48838-48857 Msa1398340:intron 55.0%
TGGCGAGTCTAGTAGAGCCT+TGG + tig0022248:48880-48899 Msa1398340:intron 55.0%
CGAGTCTAGTAGAGCCTTGG+AGG + tig0022248:48883-48902 Msa1398340:intron 55.0%
GTAACCTTCCCAGAGTCAGC+TGG - tig0022248:49570-49589 None:intergenic 55.0%
CCAGGCTCACTTCCGTTAAG+AGG - tig0022248:50335-50354 None:intergenic 55.0%
CCTCTTAACGGAAGTGAGCC+TGG + tig0022248:50332-50351 Msa1398340:CDS 55.0%
TGAGAAGCTGCACTGCAACC+TGG - tig0022248:50591-50610 None:intergenic 55.0%
GCAGAGGGAACTCAGAGAGA+AGG + tig0022248:50721-50740 Msa1398340:CDS 55.0%
GCTTCTCCTTTCTCTCGCTG+AGG - tig0022248:51252-51271 None:intergenic 55.0%
! TGTGCCCAAGCATTGTCCTG+TGG - tig0022248:51294-51313 None:intergenic 55.0%
CAGGACAATGCTTGGGCACA+TGG + tig0022248:51294-51313 Msa1398340:CDS 55.0%
CTGCTACAGTCTTCGGAAGC+AGG - tig0022248:51357-51376 None:intergenic 55.0%
GTGAACCTACTGAGACGGAG+AGG + tig0022248:51631-51650 Msa1398340:CDS 55.0%
CTATCCCTCTCCGTCTCAGT+AGG - tig0022248:51639-51658 None:intergenic 55.0%
GCTCGTTATCTCACTGCACC+TGG + tig0022248:51954-51973 Msa1398340:CDS 55.0%
AACTCATGAGCCACAAGGCC+AGG - tig0022248:51975-51994 None:intergenic 55.0%
TCATTCTGCGCGCAGACAAG+TGG + tig0022248:54557-54576 Msa1398340:CDS 55.0%
TGAGCTTGAGGTTGCAAGGC+TGG + tig0022248:54830-54849 Msa1398340:CDS 55.0%
TGCAAGGCTGGAGCAATTGC+TGG + tig0022248:54842-54861 Msa1398340:CDS 55.0%
AGTGTCAGCAGAGATGGGGA+AGG + tig0022248:54867-54886 Msa1398340:CDS 55.0%
AGAGACTCCTGCATAGCGAC+CGG - tig0022248:55164-55183 None:intergenic 55.0%
ACACACGTGGCACCACACTT+AGG + tig0022248:55881-55900 Msa1398340:intron 55.0%
! TTGACTCGTCTACGCTGACG+TGG - tig0022248:55909-55928 None:intergenic 55.0%
CCTAGTGCGGGGATAAGGAA+TGG - tig0022248:58300-58319 None:intergenic 55.0%
CCATTCCTTATCCCCGCACT+AGG + tig0022248:58297-58316 Msa1398340:CDS 55.0%
GTGAAGGGGGAAAGCCTTGG+AGG + tig0022248:48723-48742 Msa1398340:intron 60.0%
! CATCCCAGCTGACTCTGGGA+AGG + tig0022248:49563-49582 Msa1398340:CDS 60.0%
! GCCCAAGCATTGTCCTGTGG+TGG - tig0022248:51291-51310 None:intergenic 60.0%
!! TCTCACTGCACCTGGCCTTG+TGG + tig0022248:51962-51981 Msa1398340:CDS 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + tig0022248:55842-55861 Msa1398340:intron 60.0%
GCTGACGTGGCACCTAAGTG+TGG - tig0022248:55896-55915 None:intergenic 60.0%
AGGACCACCGGTCGCTATGC+AGG + tig0022248:55154-55173 Msa1398340:CDS 65.0%
GACTCCTGCATAGCGACCGG+TGG - tig0022248:55161-55180 None:intergenic 65.0%
GGTGCCCTAGTGCGGGGATA+AGG - tig0022248:58305-58324 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0022248 gene 46915 58649 46915 ID=Msa1398340;Name=Msa1398340
tig0022248 mRNA 46915 58649 46915 ID=Msa1398340-mRNA-1;Parent=Msa1398340;Name=Msa1398340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=336|1|0.91|1|0.81|0.66|12|277|1979
tig0022248 exon 46915 47135 46915 ID=Msa1398340-mRNA-1:exon:16540;Parent=Msa1398340-mRNA-1
tig0022248 exon 47592 47784 47592 ID=Msa1398340-mRNA-1:exon:16541;Parent=Msa1398340-mRNA-1
tig0022248 exon 49525 49725 49525 ID=Msa1398340-mRNA-1:exon:16542;Parent=Msa1398340-mRNA-1
tig0022248 exon 50245 50367 50245 ID=Msa1398340-mRNA-1:exon:16543;Parent=Msa1398340-mRNA-1
tig0022248 exon 50592 50629 50592 ID=Msa1398340-mRNA-1:exon:16544;Parent=Msa1398340-mRNA-1
tig0022248 exon 50709 50838 50709 ID=Msa1398340-mRNA-1:exon:16545;Parent=Msa1398340-mRNA-1
tig0022248 exon 51021 55724 51021 ID=Msa1398340-mRNA-1:exon:16546;Parent=Msa1398340-mRNA-1
tig0022248 exon 56546 56686 56546 ID=Msa1398340-mRNA-1:exon:16547;Parent=Msa1398340-mRNA-1
tig0022248 exon 56888 56989 56888 ID=Msa1398340-mRNA-1:exon:16548;Parent=Msa1398340-mRNA-1
tig0022248 exon 57067 57209 57067 ID=Msa1398340-mRNA-1:exon:16549;Parent=Msa1398340-mRNA-1
tig0022248 exon 58039 58368 58039 ID=Msa1398340-mRNA-1:exon:16550;Parent=Msa1398340-mRNA-1
tig0022248 exon 58423 58649 58423 ID=Msa1398340-mRNA-1:exon:16551;Parent=Msa1398340-mRNA-1
tig0022248 five_prime_UTR 46915 47135 46915 ID=Msa1398340-mRNA-1:five_prime_utr;Parent=Msa1398340-mRNA-1
tig0022248 five_prime_UTR 47592 47706 47592 ID=Msa1398340-mRNA-1:five_prime_utr;Parent=Msa1398340-mRNA-1
tig0022248 CDS 47707 47784 47707 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 49525 49725 49525 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 50245 50367 50245 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 50592 50629 50592 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 50709 50838 50709 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 51021 55724 51021 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 56546 56686 56546 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 56888 56989 56888 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 57067 57209 57067 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 CDS 58039 58318 58039 ID=Msa1398340-mRNA-1:cds;Parent=Msa1398340-mRNA-1
tig0022248 three_prime_UTR 58319 58368 58319 ID=Msa1398340-mRNA-1:three_prime_utr;Parent=Msa1398340-mRNA-1
tig0022248 three_prime_UTR 58423 58649 58423 ID=Msa1398340-mRNA-1:three_prime_utr;Parent=Msa1398340-mRNA-1
Gene Sequence

>Msa1398340

ATGTCTAGAGTTACCAAATGGAAGATTGAGAAAACTAAAGTTAAGGTGGTTTTTCGCCTTCAATTCCATGCTACACATATTCCACAATCTGGATGGGATAAACTGTTTATCTCTTTCATCCCAGCTGACTCTGGGAAGGTTACATCAAAAACAACCAAAGCAAATGTGAGAAATGGAACTTGCAAGTGGTCAGATCCAATCTATGAAACTACAAGACTCCTTCAAGATATTAAAACAAGACAATATGAGGAGAAAGTTTACAAACTTGTTGTGGGGATGGGCTCTTCAAGATCTAGCATCCTTGGTGAGGCCAACATAGATCTCGCTGATTTTGTTGATGCGTTGAAGCCTACAGCTGTTGCTTTGCCTCTTAACGGAAGTGAGCCTGGAGTCACACTACATGTTGCAGTGCAGCTTCTCACTTCCAAAACTGGTTTTAGAGAATTCGAACAGCAGAGGGAACTCAGAGAGAAGGGTCTACAAACAACCTCTGACCAAGGTAGTCATGATGAATCTGCTGATAGCAAAGATTCATCTCCTGACCAGAATGTTAATAATCACATTAATAAGGTCCATTCAAAAGGGAAATTGAAAAGGGAATCAAAATATCTCCCTCGTACTTCTTCACTCGAAGGAGAATCAAGGTTAAATGAAGATTATGCTGACTCAGCTGCTGGATTTGATGGCTCTTCTACTACTTCTGAAAGTGTGTATACTGAGAAGCATGATACGCATGAAGTGGAAAGTCTTAAAAGCACAGTGTCTGGTGATTTAGGTGTACTATCTCTCGGACAAAGTCCTCAGCGAGAGAAAGGAGAAGCACCTGACAATCAGTTTCCACCACAGGACAATGCTTGGGCACATGGTTGGAGCATAGACTATTCAGCTGCAAATAAATTGGCTCCTGCTTCCGAAGACTGTAGCAGTAGCAGTCTTAAAGGAAATTTAGAAGCAGTTGAGTCATCTATTCTTGATCTAAAACTGAAGGTGAGCTGTTTGCAAAATCATTCTGATGAAATTGGTGTTGAAACAAAACTTTTTTCTGAGCAAATTGCTGCTGAGATATCATCAGGAGAAGAGCTAGCAAAAGAGGTTGCGGTACTAAAATCAGAATGTTCAAAGTTTAAAGATGAATTTGAGCAGCTTAAAAGTTCTAAGTTAAGCTTAGCATTTGCTCGCAGTGAACCTACTGAGACGGAGAGGGATAGATTATTTCATAATTTACAGTTTAAATGGCATAAGGGGCTTTTGCTCATGGAAGATAAGTTAAGAGATATTCAGAAAGTATCTATGGGATTACCTGAAAGGGATTTTAGGTTCTTTAACTTGGAGTTAGAGAGAGTAGTTGAGATTTTGCAGGATCTCAAACAAGAATCTAGCGATCCAATTTCAGGGACTAAAGTTGTGAACGGAAGAGAAAATGCGAAGATGGAGTTACAAATGGATGGGCAATTTTTAACAGATATTGGGTCCGATGCTGCTTTATTTCAACCCGAAAGCATGGCTCGTTATCTCACTGCACCTGGCCTTGTGGCTCATGAGTTTGATTCTGTAGATCCCACCCTTGCTATGAAGGAGAAAATATTCGAACTTCTAAGGGAGCTAGAGGAGTCCAAAACTGAAAGAGAAGGCTTTGTACGGAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAAGAACTTGAGCAGAATCAAAGGCAGATGATGGTTGAGTTGCAGAACCTCAGGAATGAACATTCTACTTGCATATATGCAATTTCTGCTGGTAAGAACGAAATGGAGAAAATGCACCAAAATATGAATGAGCAGATAATGAAATTTTCTGAAGATAGGCGCATTTTGGAATCTCTCAACAGCGAGTTTGAAAAAAGGGCTACTTCTGCAGAAGCAGCCCTTAAAAGGGCTAGATTGAACTATTCTATTGCTGTCGGTCAATTGCAAAAAGATCTTGAACTTCTTTCTTGCCAGGTTCTTTCTATGCATGAGACAAATGAGAATCTCATAAACCAGACCCTTTCTGATTCTTCACTCTCAAACACTGATGGTTTCCCAGAACTAGTGAATTGTACTAAAAGTTCAGAAGGTCATACTTCTAATCAATTGCTACGACAAAATCACAGTTCTTCCTTTCATAGACAACATTTGGGTGAAGACGTTTTACTAAGCGATTTGAAAAGATCACTTCGATTGCAAGAGGGGTTATACAAACAGGTTGAAGAAGAAATCTGCCAGATGCATTTTGTAAATATATACTCAGATGTGTTTTCTAAGGCTCTGCAAGAAACATTGCTTGAAGCCAGTCTTAACATTCAGGCCACAGAACGTGAAAAATTTCAACTCTCTAGGCAGCTGGAGCTTTCAAATCAATCCAATGAGTCACTGGTTCTTAGGTTGCAGAACGCTATGAATGATATCCTCTCGTTAAAGGAGTACAAGGAGATTTGCATAGCAAAGAGCAATGATCTTACTCACCAGAACCAAATTTTAGAGGCAAATTTAAAAGATCTTGGTCATGAAAACAATCTTCTTACTCATAAAATTAATGAGGTGGAAGTCCTTTTGACAGATTATAGAAGTAAATATGTTGCATGCAGTGCAGAGAACTCAGAGTTGAATAACTTATTGAAAAAAGAGAGCCTAGAAAATGACCATCTTCATGATGAAATATCCACTTTGCAGAAAGAAATAATATCTTTCAGAACTAAATTTGATGTGCTGGACTCCATGAATAATGATCTGCAAAATAAAGTCATGTTTTTGTCTAATAAGTTGCAGAAATTAGTGGCATCATATGATGATAGATGCACTGAACTTTCTCCTTGTAGTAGTTCTGCTTGTTTGGATTCAGAATGCAAAGACTTAGAAATTTTGTTATTGCAACTAGAAGAGCAGCAACGTAATGCTTTTGATAGGATCTTGGTACTCGTTGAAGAGAAGAAAACTTTAGTGCACGAAAAACAAATGGCTCAAGTATCTTTAAGCACAGCAGAATCAGATGCTCTTGTCATGAAACAGAAGTTTGGGCATGATTTACAGCAGATGGCAAGCAACATAAGTGTGTCTAGTATCCAGTTGCAGAAACTTGAGTCAGATCTTGAGGTGCTTGTTGAAAAGATGAGTGCTGGTTTTAAATCTGAAGAAAGATACTCTCAGCAACAGTATGAATTGTTGTCTAGTTTTGATCATTTGGAGGCTGAACTTCAGCAACTGAATTCCCGAAATCAGGATCTTAGTCAAGAAATTATAAAGCTGGGTACTTCGGCTAGTGATCTTGAAATGTGTAAGCTGACCTTAGCAGCAATTACAGAGGAGAAGAAAGCTTTGGAGTTGTCTCTCCAGGACAAAACAGAAGAATCTGCCAAGATTTCATCTGAGATTAATTTTTTGAAAAACAACTTGTCTTCTCTACAGGATGAGTTGCGCGATGAAAAGAATTTCAGGGAAAAATCGGAGAAAACAGTCTTAGATCTTACAACAGAATTGAATGAAAAACAACAGCAGCTGCAGGACAAAACAGAAGAATCTGCAAAGATTTCATCTGAGATTAATTTTTTGAAAAACAACTTGTGTTCTCTGCGGAATGAGTTGTGTGATGAAAAAATCTTCAGAGAAAAATTGGAGACAACAGTCATGGATCTTACAACCGAATTGAATGAAAAGCAACACCAGCTGCAGGACAAAACAGAAGAATCTGCAAAGATCTCATCTGAGCTTATTTTTTTGAAAAACAACTTGTGTTCTCTGCAGAATGAGTTGTGTGATGAAAAAATCTTCAGGGAAAAATCGGAGAAAACAGTTATAGATCTTACAGCAGAATTGAATGAAAAGCAACACAAGCTGCAGGATTCCGATATGAACAGACAAGAACTGGTCCATCTCAAGCAACTGGTGACAGACTTGGAATCTGAGAGATCGAGAATCGTAGATCTTCTGCAGATATCTGAGAAACGTCTTGAAGATGCTTTAAAGGAATCTTCTTCTATTAGTTATCTGGAAACACACTTATCTGAAATGCATGAATGTTCAATAGCTACTGATGTCGTTATGACCTGTACCAGAGCTCAGTTTGAGGGTCATGTGGAGGAACTTGCTGAGAAACTTCATTCTGCGCGCAGACAAGTGGATGTGCTATGTGAGAAGAATCTTGATTTAGAATCTGAATTGAATGCTTGTCTTTCTAGAGAATTGAATTGCATGGAAGAAAATATGACACTGTCGACAAGTCTTGACTACTTAAAATCTGAGTTGGAGGTCTATACTGCTCAGTGTAGAGCACTAATTGATCAAAATAGTGTGGCAACATCAGACCTTAAGGAACACAAGAGTAGGACAGAAAATGTCAGCAATTCTTCTTACTTGCGTGAAAGAGAGTGTGAGCTTGAGGTTGCAAGGCTGGAGCAATTGCTGGAAAGTGTCAGCAGAGATGGGGAAGGACTGTTTTTGTCCAATGAAGAAGCCAAAGTCAAATGTATAGTTCTCCAGGGAAAACTGGATGAACTGAAAACTGCAATTACTTCACTGCAACAATCAGATAATGAGTTGATAAGGCTGCAGAACCAATGTAATGAGCTTACCATGAGGCTTTCTGAACAGGTTCTTAAGACAGAGGAGTTCAAGAATTTGTCTACTCATTTGAAGGAACTGAAAGACAAAGCTGAAACTGAGTGTCTTAATGCTCGTGACAAAAGAGGACATGAAGGACCACCGGTCGCTATGCAGGAGTCTCTGAGAATTGCATTTATCAAGGAACAGTATGAAACTAAGTTGCAAGAAATAAAACAACAACTGTCTTTGTCAAAAAAGCATAGTGAGGAAATGCTGTGGAAACTACAACATGCAAGTGAAGAAACTGAGAATAGAAAAAAGTCTGAAGATGCTCAAATAAAAGTAAATGAAGAGCTGGGAATGAAGATCTTGGAATTGGAGGCTGAGTTACAGGCTGTAATTTCTGACAAACGCAATTTGTTAAATGCTTATGACCTGTTAAAGGCTGAAAAGGAGTGCTCAGTGATATCCCTTGAATGTTGCAAGCAAGAAAAACAAGAACTTGAAGCTTCTCTTCAGAAATGCAGTGAGGAAAAGTCCAAAATTGAAGTAGAGGTTACTGTTTTGAAGGAATCAATTGAGACTTTGAAATCTAAAGTGAATGTTCTGAATGAGGGCAATGGCACATCCTCTTTATTAAATGCTCAAGAAAAATCAAAGTCTGCAGTTTGCAGCAGTCATGAACCAGAGAGTGCAAATTCAATCCTCAATATGCAGCCAGAGGATCAGGATCCTCTTGCATTTAGAGTTACGAATGGATGCCAAACTCTGGGAACTGAAGAGGACTTGCAGCAAAATGAAGAAAGCAAGCACCTGGCTTTAGCTCAAAGTTTGAAATCTAGCATTGAGCACCTGAATAAGGAGTTGGAAAGGATGAAAAACGATAATATGCTTCCTACTGAAGATTGTCAAAGCCATGAGACAAGTTTTCCAGGTCTGCAAAGAGAACTGACACAGTTACATGAGGCCAATCAAGAGTTAGGAAGCATGTTCCCTGTGTTCAATAAAATCTCTGTCAGTGGCAATGCATTAGAAAGGGTGCTTGCTTTGGAGATTGAGCTTGCTGAAGCATTGCAAGCCAGGAAGAAGTCTAGCATCCAATTTCAGAGTTCTTTCACGAAGCAACACAGCGATGAAGAAGCAGTATTCAGAAGTTTCAGGGATATCAATGAGCTAATCAAAGATATGTTAGAACTAAAGACAAGACATTCTTCCATGGAGACAGAACTAAAGGAGATGCACGACCGTTACTCTCAATTAAGCCTTCAGTTCGCGGAAGTTGAAGGTGAGAGACAAAAACTGATGATGACTCTTAAGAATACTCGAGCATCCAAAATGGCTCCAAATTCTCCGACCTACTTCAGAGACCATTCCTTATCCCCGCACTAG
Protein sequence

>Msa1398340

MSRVTKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADSGKVTSKTTKANVRNGTCKWSDPIYETTRLLQDIKTRQYEEKVYKLVVGMGSSRSSILGEANIDLADFVDALKPTAVALPLNGSEPGVTLHVAVQLLTSKTGFREFEQQRELREKGLQTTSDQGSHDESADSKDSSPDQNVNNHINKVHSKGKLKRESKYLPRTSSLEGESRLNEDYADSAAGFDGSSTTSESVYTEKHDTHEVESLKSTVSGDLGVLSLGQSPQREKGEAPDNQFPPQDNAWAHGWSIDYSAANKLAPASEDCSSSSLKGNLEAVESSILDLKLKVSCLQNHSDEIGVETKLFSEQIAAEISSGEELAKEVAVLKSECSKFKDEFEQLKSSKLSLAFARSEPTETERDRLFHNLQFKWHKGLLLMEDKLRDIQKVSMGLPERDFRFFNLELERVVEILQDLKQESSDPISGTKVVNGRENAKMELQMDGQFLTDIGSDAALFQPESMARYLTAPGLVAHEFDSVDPTLAMKEKIFELLRELEESKTEREGFVRKMDQMECYYEALIQELEQNQRQMMVELQNLRNEHSTCIYAISAGKNEMEKMHQNMNEQIMKFSEDRRILESLNSEFEKRATSAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLINQTLSDSSLSNTDGFPELVNCTKSSEGHTSNQLLRQNHSSSFHRQHLGEDVLLSDLKRSLRLQEGLYKQVEEEICQMHFVNIYSDVFSKALQETLLEASLNIQATEREKFQLSRQLELSNQSNESLVLRLQNAMNDILSLKEYKEICIAKSNDLTHQNQILEANLKDLGHENNLLTHKINEVEVLLTDYRSKYVACSAENSELNNLLKKESLENDHLHDEISTLQKEIISFRTKFDVLDSMNNDLQNKVMFLSNKLQKLVASYDDRCTELSPCSSSACLDSECKDLEILLLQLEEQQRNAFDRILVLVEEKKTLVHEKQMAQVSLSTAESDALVMKQKFGHDLQQMASNISVSSIQLQKLESDLEVLVEKMSAGFKSEERYSQQQYELLSSFDHLEAELQQLNSRNQDLSQEIIKLGTSASDLEMCKLTLAAITEEKKALELSLQDKTEESAKISSEINFLKNNLSSLQDELRDEKNFREKSEKTVLDLTTELNEKQQQLQDKTEESAKISSEINFLKNNLCSLRNELCDEKIFREKLETTVMDLTTELNEKQHQLQDKTEESAKISSELIFLKNNLCSLQNELCDEKIFREKSEKTVIDLTAELNEKQHKLQDSDMNRQELVHLKQLVTDLESERSRIVDLLQISEKRLEDALKESSSISYLETHLSEMHECSIATDVVMTCTRAQFEGHVEELAEKLHSARRQVDVLCEKNLDLESELNACLSRELNCMEENMTLSTSLDYLKSELEVYTAQCRALIDQNSVATSDLKEHKSRTENVSNSSYLRERECELEVARLEQLLESVSRDGEGLFLSNEEAKVKCIVLQGKLDELKTAITSLQQSDNELIRLQNQCNELTMRLSEQVLKTEEFKNLSTHLKELKDKAETECLNARDKRGHEGPPVAMQESLRIAFIKEQYETKLQEIKQQLSLSKKHSEEMLWKLQHASEETENRKKSEDAQIKVNEELGMKILELEAELQAVISDKRNLLNAYDLLKAEKECSVISLECCKQEKQELEASLQKCSEEKSKIEVEVTVLKESIETLKSKVNVLNEGNGTSSLLNAQEKSKSAVCSSHEPESANSILNMQPEDQDPLAFRVTNGCQTLGTEEDLQQNEESKHLALAQSLKSSIEHLNKELERMKNDNMLPTEDCQSHETSFPGLQRELTQLHEANQELGSMFPVFNKISVSGNALERVLALEIELAEALQARKKSSIQFQSSFTKQHSDEEAVFRSFRDINELIKDMLELKTRHSSMETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNTRASKMAPNSPTYFRDHSLSPH*