Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238280 | XP_020208899.1 | 70.253 | 316 | 31 | 3 | 4 | 259 | 38 | 350 | 7.45e-145 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238280 | sp|Q94B38|GPT2_ARATH | 90.860 | 186 | 17 | 0 | 70 | 255 | 165 | 350 | 1.11e-120 | 352 |
| Msa0238280 | sp|Q94B38|GPT2_ARATH | 53.125 | 64 | 22 | 1 | 4 | 67 | 47 | 102 | 8.18e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238280 | A0A151U0K2 | 70.253 | 316 | 31 | 3 | 4 | 259 | 34 | 346 | 4.38e-144 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0196370 | Msa0238280 | 0.857748 | 1.321280e-62 | -8.615850e-47 |
| Msa0238260 | Msa0238280 | 0.892548 | 1.434019e-74 | -8.615850e-47 |
| Msa0238280 | Msa0275690 | 0.924601 | 5.664092e-90 | -8.615850e-47 |
| Msa0238280 | Msa0316270 | 0.896147 | 4.876082e-76 | -8.615850e-47 |
| Msa0238280 | Msa0316280 | 0.846743 | 1.793260e-59 | -8.615850e-47 |
| Msa0238280 | Msa0386740 | 0.830451 | 2.915717e-55 | -8.615850e-47 |
| Msa0238280 | Msa0550330 | 0.821018 | 5.047185e-53 | -8.615850e-47 |
| Msa0238280 | Msa0646780 | 0.805632 | 1.215284e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238280 | MtrunA17_Chr2g0288011 | 67.823 | 317 | 38 | 7 | 1 | 255 | 43 | 357 | 1.98e-134 | 384 |
| Msa0238280 | MtrunA17_Chr4g0074541 | 85.922 | 206 | 26 | 1 | 53 | 255 | 149 | 354 | 3.98e-118 | 343 |
| Msa0238280 | MtrunA17_Chr4g0074541 | 62.903 | 62 | 23 | 0 | 6 | 67 | 45 | 106 | 3.88e-18 | 82.8 |
| Msa0238280 | MtrunA17_Chr3g0097931 | 81.553 | 206 | 35 | 1 | 53 | 255 | 158 | 363 | 2.64e-117 | 341 |
| Msa0238280 | MtrunA17_Chr2g0291851 | 54.787 | 188 | 80 | 4 | 71 | 255 | 172 | 357 | 3.06e-60 | 195 |
| Msa0238280 | MtrunA17_Chr4g0046561 | 44.330 | 194 | 99 | 4 | 70 | 259 | 167 | 355 | 2.43e-50 | 169 |
| Msa0238280 | MtrunA17_Chr5g0419001 | 42.784 | 194 | 102 | 3 | 70 | 259 | 172 | 360 | 1.91e-48 | 165 |
| Msa0238280 | MtrunA17_Chr6g0449891 | 45.833 | 192 | 96 | 4 | 70 | 255 | 181 | 370 | 2.68e-40 | 144 |
| Msa0238280 | MtrunA17_Chr4g0058971 | 39.048 | 210 | 120 | 3 | 52 | 259 | 140 | 343 | 2.35e-36 | 132 |
| Msa0238280 | MtrunA17_Chr3g0117501 | 41.361 | 191 | 107 | 4 | 68 | 255 | 176 | 364 | 2.37e-35 | 130 |
| Msa0238280 | MtrunA17_Chr3g0114581 | 29.114 | 158 | 102 | 3 | 41 | 198 | 68 | 215 | 1.17e-13 | 69.7 |
| Msa0238280 | MtrunA17_Chr1g0160071 | 29.114 | 158 | 102 | 3 | 41 | 198 | 67 | 214 | 2.29e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238280 | AT1G61800.1 | 90.860 | 186 | 17 | 0 | 70 | 255 | 165 | 350 | 1.13e-121 | 352 |
| Msa0238280 | AT1G61800.1 | 53.125 | 64 | 22 | 1 | 4 | 67 | 47 | 102 | 8.32e-14 | 70.9 |
| Msa0238280 | AT1G61800.2 | 90.860 | 186 | 17 | 0 | 70 | 255 | 165 | 350 | 1.43e-121 | 353 |
| Msa0238280 | AT5G54800.1 | 88.710 | 186 | 21 | 0 | 70 | 255 | 165 | 350 | 1.22e-118 | 344 |
| Msa0238280 | AT5G17630.1 | 56.250 | 192 | 79 | 4 | 71 | 259 | 181 | 370 | 1.56e-67 | 215 |
| Msa0238280 | AT4G03950.1 | 64.497 | 169 | 44 | 3 | 70 | 237 | 66 | 219 | 9.17e-60 | 191 |
| Msa0238280 | AT5G46110.2 | 45.361 | 194 | 97 | 4 | 70 | 259 | 63 | 251 | 5.95e-52 | 171 |
| Msa0238280 | AT5G46110.4 | 45.361 | 194 | 97 | 4 | 70 | 259 | 176 | 364 | 6.46e-51 | 172 |
| Msa0238280 | AT5G46110.1 | 45.361 | 194 | 97 | 4 | 70 | 259 | 176 | 364 | 6.79e-51 | 171 |
| Msa0238280 | AT5G46110.3 | 43.299 | 194 | 90 | 5 | 70 | 259 | 176 | 353 | 9.57e-46 | 158 |
| Msa0238280 | AT3G01550.1 | 42.487 | 193 | 108 | 2 | 70 | 259 | 147 | 339 | 3.23e-34 | 127 |
| Msa0238280 | AT5G33320.1 | 39.683 | 189 | 109 | 4 | 70 | 255 | 176 | 362 | 1.66e-33 | 125 |
| Msa0238280 | AT3G01550.2 | 40.933 | 193 | 106 | 3 | 70 | 259 | 147 | 334 | 4.24e-30 | 116 |
| Msa0238280 | AT1G77610.1 | 29.932 | 147 | 95 | 1 | 52 | 198 | 71 | 209 | 3.31e-13 | 68.9 |
| Msa0238280 | AT1G21870.1 | 28.188 | 149 | 87 | 3 | 52 | 198 | 77 | 207 | 7.09e-12 | 65.1 |
Find 41 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTCACATTCTTTCTTT+TGG | 0.109741 | 2_2:-11696755 | None:intergenic |
| CTCTCATTGTTGCCAATAAT+TGG | 0.171795 | 2_2:+11701733 | Msa0238280:CDS |
| CAAATTTGGCATTTGTATTC+AGG | 0.181063 | 2_2:+11701906 | Msa0238280:CDS |
| GGGAGCTATGATATCAAATT+TGG | 0.191205 | 2_2:+11701892 | Msa0238280:CDS |
| CTGTTGAGGGTCCTAAAGTT+TGG | 0.285511 | 2_2:+11702035 | Msa0238280:CDS |
| TGAAAGGCAGAGAGGTTTCT+TGG | 0.312189 | 2_2:-11696701 | None:intergenic |
| CAACCAGCAGCCCAAACTTT+AGG | 0.316051 | 2_2:-11702046 | None:intergenic |
| AGTGCACAACCACCAATTAT+TGG | 0.331060 | 2_2:-11701745 | None:intergenic |
| TGTGCTTACCAAACAAAATT+CGG | 0.340997 | 2_2:-11702094 | None:intergenic |
| GGTCCTAAAGTTTGGGCTGC+TGG | 0.349467 | 2_2:+11702043 | Msa0238280:CDS |
| AGGAATATATTCTCAAATAA+AGG | 0.370780 | 2_2:+11701926 | Msa0238280:CDS |
| TGTTGAGGGTCCTAAAGTTT+GGG | 0.371200 | 2_2:+11702036 | Msa0238280:CDS |
| TTCTCAAATAAAGGAATGAA+TGG | 0.385136 | 2_2:+11701935 | Msa0238280:CDS |
| GAACTCAATTTCAATATGAT+TGG | 0.386036 | 2_2:+11701781 | Msa0238280:CDS |
| CAAACAGCTGTGTCTCAAAT+TGG | 0.392629 | 2_2:+11702070 | Msa0238280:CDS |
| GGCAACAATGAGAGGTAAAC+TGG | 0.394912 | 2_2:-11701724 | None:intergenic |
| GCAGCTCAAAAGCTCAAGAT+TGG | 0.431533 | 2_2:+11696844 | Msa0238280:CDS |
| CCTTGATCTATCAGCCTCAT+AGG | 0.468249 | 2_2:-11696785 | None:intergenic |
| GTAGCTGTGGCACACACAAT+TGG | 0.470268 | 2_2:+11701577 | Msa0238280:CDS |
| CATCATCAAGAGTGGAGAAC+CGG | 0.480485 | 2_2:+11701651 | Msa0238280:CDS |
| TAGCTGTGGCACACACAATT+GGG | 0.496344 | 2_2:+11701578 | Msa0238280:CDS |
| ATGAATGGGATGAGTGTTAG+TGG | 0.502849 | 2_2:+11701950 | Msa0238280:CDS |
| CCCTCAACAGCAATAGCAAA+AGG | 0.510807 | 2_2:-11702022 | None:intergenic |
| CTAAAGTTTGGGCTGCTGGT+TGG | 0.511387 | 2_2:+11702047 | Msa0238280:CDS |
| TCTCAAATAAAGGAATGAAT+GGG | 0.511923 | 2_2:+11701936 | Msa0238280:CDS |
| AATGAGAGGTAAACTGGCAT+AGG | 0.525217 | 2_2:-11701718 | None:intergenic |
| CAAAATTCTCATTAAATGAA+AGG | 0.528069 | 2_2:-11696717 | None:intergenic |
| ATTTCCTATGCTAAATGTCA+AGG | 0.536101 | 2_2:-11702316 | None:intergenic |
| TCATTGTTGCCAATAATTGG+TGG | 0.544739 | 2_2:+11701736 | Msa0238280:CDS |
| ATGAGAGGTAAACTGGCATA+GGG | 0.559771 | 2_2:-11701717 | None:intergenic |
| CCTATGAGGCTGATAGATCA+AGG | 0.566563 | 2_2:+11696785 | Msa0238280:CDS |
| TCTCCCTTGACATTTAGCAT+AGG | 0.585989 | 2_2:+11702312 | Msa0238280:CDS |
| GATACTAGCACACTGAAAGC+CGG | 0.587523 | 2_2:-11701670 | None:intergenic |
| AGCTCAATGTTAATCTCTAG+TGG | 0.590541 | 2_2:-11696808 | None:intergenic |
| TTCACTCACATCATCAAGAG+TGG | 0.593759 | 2_2:+11701643 | Msa0238280:CDS |
| ATTGGGTACGCAGGTAGCTG+TGG | 0.607043 | 2_2:+11701564 | Msa0238280:intron |
| GACAGAATGTCAAGCCTATG+AGG | 0.612479 | 2_2:+11696771 | Msa0238280:CDS |
| CAATTATTGGCAACAATGAG+AGG | 0.616851 | 2_2:-11701732 | None:intergenic |
| TTTCCTATGCTAAATGTCAA+GGG | 0.621205 | 2_2:-11702315 | None:intergenic |
| CTAGTATCAAGATTCATGCA+TGG | 0.637886 | 2_2:+11701685 | Msa0238280:CDS |
| TCATTAAATGAAAGGCAGAG+AGG | 0.678251 | 2_2:-11696709 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAAATAAAAGCAAA+TGG | - | chr2_2:11697732-11697751 | None:intergenic | 10.0% |
| !! | CAAATATAAATAAAAGTAAA+TGG | - | chr2_2:11697780-11697799 | None:intergenic | 10.0% |
| !! | TAATGTTAACAAAATAATTT+CGG | + | chr2_2:11697839-11697858 | Msa0238280:intron | 10.0% |
| !! | AAATAAAGAAACAAAAATAA+TGG | - | chr2_2:11698866-11698885 | None:intergenic | 10.0% |
| !!! | ATCTTACTTTTTATTTTATT+CGG | - | chr2_2:11699007-11699026 | None:intergenic | 10.0% |
| !!! | ATTAGATTTTTTTAGATTTA+GGG | - | chr2_2:11700551-11700570 | None:intergenic | 10.0% |
| !! | TTTCATTTCTAAATTATTAT+CGG | + | chr2_2:11701298-11701317 | Msa0238280:intron | 10.0% |
| !!! | ACTTTAATTAATAATAGTTT+TGG | + | chr2_2:11702199-11702218 | Msa0238280:intron | 10.0% |
| !! | ACTAAATTAATAAAAGCAAA+TGG | - | chr2_2:11697757-11697776 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTGTTACATTTA+AGG | - | chr2_2:11698111-11698130 | None:intergenic | 15.0% |
| !! | CTTAAATGTAACAAAAAAAA+AGG | + | chr2_2:11698109-11698128 | Msa0238280:intron | 15.0% |
| !!! | CAAAAATTTATTCTTTTCAA+AGG | - | chr2_2:11699743-11699762 | None:intergenic | 15.0% |
| !!! | GAAAAGAATAAATTTTTGTT+AGG | + | chr2_2:11699745-11699764 | Msa0238280:intron | 15.0% |
| !!! | GATTAGATTTTTTTAGATTT+AGG | - | chr2_2:11700552-11700571 | None:intergenic | 15.0% |
| !!! | GTATATTTGTATTTTACTTT+GGG | + | chr2_2:11701001-11701020 | Msa0238280:intron | 15.0% |
| !! | TTTATTACTTAAATTGTTAC+TGG | + | chr2_2:11701430-11701449 | Msa0238280:intron | 15.0% |
| !! | CAAAATTCTCATTAAATGAA+AGG | - | chr2_2:11696720-11696739 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCAATATTCTCTT+TGG | + | chr2_2:11697333-11697352 | Msa0238280:intron | 20.0% |
| !!! | TTCTTTTCAATATTCTCTTT+GGG | + | chr2_2:11697334-11697353 | Msa0238280:intron | 20.0% |
| !!! | CTACTTATTTTATCCTTTTT+GGG | - | chr2_2:11697597-11697616 | None:intergenic | 20.0% |
| !!! | TCTACTTATTTTATCCTTTT+TGG | - | chr2_2:11697598-11697617 | None:intergenic | 20.0% |
| !!! | GCACTAAATAATTTTCAATT+AGG | - | chr2_2:11698135-11698154 | None:intergenic | 20.0% |
| !! | TGTAAAAATCAATAAAACCA+TGG | + | chr2_2:11698203-11698222 | Msa0238280:intron | 20.0% |
| !!! | AAGTTTTTTAACCCTATTTA+TGG | + | chr2_2:11698441-11698460 | Msa0238280:intron | 20.0% |
| !!! | TTTTTACACCAAAATAAAGA+AGG | - | chr2_2:11698589-11698608 | None:intergenic | 20.0% |
| !!! | ATTTTGGTGTAAAAAAAGAA+AGG | + | chr2_2:11698594-11698613 | Msa0238280:intron | 20.0% |
| !! | TTCTTATTACATTTACAATG+AGG | - | chr2_2:11698816-11698835 | None:intergenic | 20.0% |
| !! | TCAAATAAAAATTGCAATAG+AGG | + | chr2_2:11699321-11699340 | Msa0238280:intron | 20.0% |
| !! | GAAAAGATTAAATTCTTGTT+AGG | - | chr2_2:11699849-11699868 | None:intergenic | 20.0% |
| !!! | CAAGAATTTAATCTTTTCAA+AGG | + | chr2_2:11699851-11699870 | Msa0238280:intron | 20.0% |
| !!! | TGTTGTAGTTATCATTTTTA+GGG | - | chr2_2:11700429-11700448 | None:intergenic | 20.0% |
| !!! | ATGTTGTAGTTATCATTTTT+AGG | - | chr2_2:11700430-11700449 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTTGTTTAATTTT+TGG | - | chr2_2:11700535-11700554 | None:intergenic | 20.0% |
| !!! | CACTTAATCTAGAATTTTTT+AGG | - | chr2_2:11700704-11700723 | None:intergenic | 20.0% |
| !!! | GGTATATTTGTATTTTACTT+TGG | + | chr2_2:11701000-11701019 | Msa0238280:intron | 20.0% |
| !!! | AATTTTTCTTACAGGAAAAA+GGG | - | chr2_2:11701161-11701180 | None:intergenic | 20.0% |
| !!! | TAATTTTTCTTACAGGAAAA+AGG | - | chr2_2:11701162-11701181 | None:intergenic | 20.0% |
| !! | ATTAGAATGAAAAGAAAATG+TGG | - | chr2_2:11701185-11701204 | None:intergenic | 20.0% |
| !!! | AATTTTGAAATTTCTTAGGT+GGG | - | chr2_2:11701547-11701566 | None:intergenic | 20.0% |
| !! | ACCTAAGAAATTTCAAAATT+GGG | + | chr2_2:11701547-11701566 | Msa0238280:intron | 20.0% |
| !!! | AATTTTTGTTTCAGGATTTA+TGG | + | chr2_2:11701871-11701890 | Msa0238280:intron | 20.0% |
| !!! | ATTTTTGTTTCAGGATTTAT+GGG | + | chr2_2:11701872-11701891 | Msa0238280:intron | 20.0% |
| !! | AGGAATATATTCTCAAATAA+AGG | + | chr2_2:11701926-11701945 | Msa0238280:CDS | 20.0% |
| !! | TATACTAGTTCAAATTTCTT+CGG | + | chr2_2:11702172-11702191 | Msa0238280:intron | 20.0% |
| ! | AAAAAAAAAACGTGTGAAAG+TGG | - | chr2_2:11697186-11697205 | None:intergenic | 25.0% |
| ! | ATTTATGTTAGATACAACCT+AGG | + | chr2_2:11697212-11697231 | Msa0238280:intron | 25.0% |
| !! | TCTTTTCAATATTCTCTTTG+GGG | + | chr2_2:11697335-11697354 | Msa0238280:intron | 25.0% |
| ! | AAAAAGTGATCAAAATTCGT+CGG | + | chr2_2:11697360-11697379 | Msa0238280:intron | 25.0% |
| !! | CAGATTTAAAATTATCCCAA+GGG | - | chr2_2:11697424-11697443 | None:intergenic | 25.0% |
| ! | AAAAAGTAATCAATCTTCGT+GGG | - | chr2_2:11697573-11697592 | None:intergenic | 25.0% |
| ! | TAAAAAGTAATCAATCTTCG+TGG | - | chr2_2:11697574-11697593 | None:intergenic | 25.0% |
| !!! | TGATTACTTTTTACCCAAAA+AGG | + | chr2_2:11697581-11697600 | Msa0238280:intron | 25.0% |
| ! | GGTTATATCTACCATAAATA+GGG | - | chr2_2:11698455-11698474 | None:intergenic | 25.0% |
| ! | AGGTTATATCTACCATAAAT+AGG | - | chr2_2:11698456-11698475 | None:intergenic | 25.0% |
| !! | AGTTTAGAGGTGTATATATA+GGG | - | chr2_2:11698493-11698512 | None:intergenic | 25.0% |
| !! | AAGTTTAGAGGTGTATATAT+AGG | - | chr2_2:11698494-11698513 | None:intergenic | 25.0% |
| !!! | CTCTTTTTCCTTCTTTATTT+TGG | + | chr2_2:11698578-11698597 | Msa0238280:intron | 25.0% |
| !!! | AATTGTCTTACCTCTAAAAT+GGG | - | chr2_2:11699936-11699955 | None:intergenic | 25.0% |
| !!! | ATTTGAAGTTGAAGGAATTT+TGG | + | chr2_2:11700792-11700811 | Msa0238280:intron | 25.0% |
| !! | AGAAATCCAAATCAACTTTT+GGG | - | chr2_2:11701132-11701151 | None:intergenic | 25.0% |
| !! | AATGTGGTAATTTTTCTTAC+AGG | - | chr2_2:11701169-11701188 | None:intergenic | 25.0% |
| ! | ATAAGACATATTTAGTGTCT+GGG | + | chr2_2:11701230-11701249 | Msa0238280:intron | 25.0% |
| !!! | CAATTTTGAAATTTCTTAGG+TGG | - | chr2_2:11701548-11701567 | None:intergenic | 25.0% |
| ! | CACCTAAGAAATTTCAAAAT+TGG | + | chr2_2:11701546-11701565 | Msa0238280:intron | 25.0% |
| !!! | ACCCAATTTTGAAATTTCTT+AGG | - | chr2_2:11701551-11701570 | None:intergenic | 25.0% |
| ! | GAACTCAATTTCAATATGAT+TGG | + | chr2_2:11701781-11701800 | Msa0238280:CDS | 25.0% |
| !! | TACAATATCAATGCTCTAAA+TGG | + | chr2_2:11701845-11701864 | Msa0238280:intron | 25.0% |
| !!! | AATGGATCAATTTTTGTTTC+AGG | + | chr2_2:11701863-11701882 | Msa0238280:intron | 25.0% |
| ! | TTCTCAAATAAAGGAATGAA+TGG | + | chr2_2:11701935-11701954 | Msa0238280:CDS | 25.0% |
| ! | TCTCAAATAAAGGAATGAAT+GGG | + | chr2_2:11701936-11701955 | Msa0238280:CDS | 25.0% |
| !!! | GGATTTTTTTTAATGTTTGC+AGG | + | chr2_2:11702220-11702239 | Msa0238280:intron | 25.0% |
| !!! | TTTTTTTTAATGTTTGCAGG+TGG | + | chr2_2:11702223-11702242 | Msa0238280:intron | 25.0% |
| !!! | TTTTTTTAATGTTTGCAGGT+GGG | + | chr2_2:11702224-11702243 | Msa0238280:intron | 25.0% |
| ! | TCTGTCACATTCTTTCTTTT+GGG | - | chr2_2:11696757-11696776 | None:intergenic | 30.0% |
| ! | TTCTGTCACATTCTTTCTTT+TGG | - | chr2_2:11696758-11696777 | None:intergenic | 30.0% |
| !! | TGGATTGTATTTTTGCTACT+TGG | + | chr2_2:11696864-11696883 | Msa0238280:CDS | 30.0% |
| !! | ATTGTATTTTTGCTACTTGG+TGG | + | chr2_2:11696867-11696886 | Msa0238280:intron | 30.0% |
| !! | TTGTATTTTTGCTACTTGGT+GGG | + | chr2_2:11696868-11696887 | Msa0238280:intron | 30.0% |
| !! | GCATTTTGGTCTTTTACTTT+GGG | - | chr2_2:11697005-11697024 | None:intergenic | 30.0% |
| ! | AACAAACGTTTTTCCAACTT+TGG | + | chr2_2:11697126-11697145 | Msa0238280:intron | 30.0% |
| !! | AAGTATGTGAGGGTATTTAT+AGG | - | chr2_2:11697250-11697269 | None:intergenic | 30.0% |
| ! | CTTTTCAATATTCTCTTTGG+GGG | + | chr2_2:11697336-11697355 | Msa0238280:intron | 30.0% |
| AAAAGTGATCAAAATTCGTC+GGG | + | chr2_2:11697361-11697380 | Msa0238280:intron | 30.0% | |
| ! | GCAGATTTAAAATTATCCCA+AGG | - | chr2_2:11697425-11697444 | None:intergenic | 30.0% |
| CAGATTTAAATTTAGCCCAA+GGG | + | chr2_2:11697505-11697524 | Msa0238280:intron | 30.0% | |
| AAAATACATCATCAACCCTT+GGG | - | chr2_2:11697523-11697542 | None:intergenic | 30.0% | |
| AAAAGTAATCAATCTTCGTG+GGG | - | chr2_2:11697572-11697591 | None:intergenic | 30.0% | |
| ! | TTTAGAGGTGTATATATAGG+GGG | - | chr2_2:11698491-11698510 | None:intergenic | 30.0% |
| ! | GTTTAGAGGTGTATATATAG+GGG | - | chr2_2:11698492-11698511 | None:intergenic | 30.0% |
| AGAAAGGAAGAAGATTCATA+GGG | - | chr2_2:11698556-11698575 | None:intergenic | 30.0% | |
| AAGAAAGGAAGAAGATTCAT+AGG | - | chr2_2:11698557-11698576 | None:intergenic | 30.0% | |
| AGAAGGAAAAAGAGAAAGAA+AGG | - | chr2_2:11698572-11698591 | None:intergenic | 30.0% | |
| AAAGAAAGGATGATAAGTAG+TGG | + | chr2_2:11698608-11698627 | Msa0238280:intron | 30.0% | |
| AAGAAAGGATGATAAGTAGT+GGG | + | chr2_2:11698609-11698628 | Msa0238280:intron | 30.0% | |
| ACAATTATCTTACCACTGAA+TGG | + | chr2_2:11699416-11699435 | Msa0238280:intron | 30.0% | |
| CAATTATCTTACCACTGAAT+GGG | + | chr2_2:11699417-11699436 | Msa0238280:intron | 30.0% | |
| !! | GGCAATTCAAACTTGTTAAT+CGG | - | chr2_2:11699586-11699605 | None:intergenic | 30.0% |
| !! | AATCATCTTACCTCTGAAAT+GGG | + | chr2_2:11699658-11699677 | Msa0238280:intron | 30.0% |
| GTTAGGCTTGATTTAGATTA+AGG | + | chr2_2:11699762-11699781 | Msa0238280:intron | 30.0% | |
| AGATTAAATTCTTGTTAGGC+TGG | - | chr2_2:11699845-11699864 | None:intergenic | 30.0% | |
| GGTAATTCAAATTTGCCAAA+CGG | - | chr2_2:11699914-11699933 | None:intergenic | 30.0% | |
| ! | TTTGAATTACCCCATTTTAG+AGG | + | chr2_2:11699923-11699942 | Msa0238280:intron | 30.0% |
| !! | ATTGTCTTACCTCTAAAATG+GGG | - | chr2_2:11699935-11699954 | None:intergenic | 30.0% |
| ! | CAATTGTCTTACCTCTAAAA+TGG | - | chr2_2:11699937-11699956 | None:intergenic | 30.0% |
| ! | ATTGTGTAGATTTGAAGCAA+TGG | - | chr2_2:11700331-11700350 | None:intergenic | 30.0% |
| CAAACATTTCATCAAACACT+TGG | + | chr2_2:11700384-11700403 | Msa0238280:intron | 30.0% | |
| !! | GTTGTTTGATTTGAAGTTGA+AGG | + | chr2_2:11700784-11700803 | Msa0238280:intron | 30.0% |
| !! | TGTGTTGTTTGATGAAAATG+AGG | + | chr2_2:11700849-11700868 | Msa0238280:intron | 30.0% |
| TCTCATGATGTTAATCTCAT+GGG | + | chr2_2:11701087-11701106 | Msa0238280:intron | 30.0% | |
| ! | GAAATCCAAATCAACTTTTG+GGG | - | chr2_2:11701131-11701150 | None:intergenic | 30.0% |
| ! | CAGAAATCCAAATCAACTTT+TGG | - | chr2_2:11701133-11701152 | None:intergenic | 30.0% |
| !! | CAAAAGTTGATTTGGATTTC+TGG | + | chr2_2:11701131-11701150 | Msa0238280:intron | 30.0% |
| CATAAGACATATTTAGTGTC+TGG | + | chr2_2:11701229-11701248 | Msa0238280:intron | 30.0% | |
| TTGAATGTAACTACATGCAT+CGG | - | chr2_2:11701274-11701293 | None:intergenic | 30.0% | |
| GAAATTACATTTGTCAGTGT+CGG | - | chr2_2:11701400-11701419 | None:intergenic | 30.0% | |
| CAAATTTGGCATTTGTATTC+AGG | + | chr2_2:11701906-11701925 | Msa0238280:CDS | 30.0% | |
| ! | AAATTGGTCCGAATTTTGTT+TGG | + | chr2_2:11702086-11702105 | Msa0238280:CDS | 30.0% |
| TGTGCTTACCAAACAAAATT+CGG | - | chr2_2:11702097-11702116 | None:intergenic | 30.0% | |
| TTTCCTATGCTAAATGTCAA+GGG | - | chr2_2:11702318-11702337 | None:intergenic | 30.0% | |
| ATTTCCTATGCTAAATGTCA+AGG | - | chr2_2:11702319-11702338 | None:intergenic | 30.0% | |
| TCATTAAATGAAAGGCAGAG+AGG | - | chr2_2:11696712-11696731 | None:intergenic | 35.0% | |
| AGCTCAATGTTAATCTCTAG+TGG | - | chr2_2:11696811-11696830 | None:intergenic | 35.0% | |
| !!! | TTTTGAGCTGCTTTTTCACT+TGG | - | chr2_2:11696835-11696854 | None:intergenic | 35.0% |
| AATTCTGCTCTTTACCCAAA+CGG | + | chr2_2:11696968-11696987 | Msa0238280:intron | 35.0% | |
| !! | GGCATTTTGGTCTTTTACTT+TGG | - | chr2_2:11697006-11697025 | None:intergenic | 35.0% |
| GAAAAACGTTTGTTCTTCAC+TGG | - | chr2_2:11697120-11697139 | None:intergenic | 35.0% | |
| ATAGGTAGAAATGTGAACCT+AGG | - | chr2_2:11697232-11697251 | None:intergenic | 35.0% | |
| GGAGATAATGTGAGGAATAT+GGG | - | chr2_2:11697273-11697292 | None:intergenic | 35.0% | |
| AGGAGATAATGTGAGGAATA+TGG | - | chr2_2:11697274-11697293 | None:intergenic | 35.0% | |
| AAAGTGATCAAAATTCGTCG+GGG | + | chr2_2:11697362-11697381 | Msa0238280:intron | 35.0% | |
| ! | CAAGAAGTTCTTTTTACCCA+CGG | - | chr2_2:11697472-11697491 | None:intergenic | 35.0% |
| TGGGTAAAAAGAACTTCTTG+TGG | + | chr2_2:11697472-11697491 | Msa0238280:intron | 35.0% | |
| CCTTGGGCTAAATTTAAATC+TGG | - | chr2_2:11697507-11697526 | None:intergenic | 35.0% | |
| CCAGATTTAAATTTAGCCCA+AGG | + | chr2_2:11697504-11697523 | Msa0238280:intron | 35.0% | |
| GAAAATACATCATCAACCCT+TGG | - | chr2_2:11697524-11697543 | None:intergenic | 35.0% | |
| ! | ATGATGTATTTTCCCCAAGA+AGG | + | chr2_2:11697531-11697550 | Msa0238280:intron | 35.0% |
| TGAGTTAACTCACGCTAATT+AGG | - | chr2_2:11698281-11698300 | None:intergenic | 35.0% | |
| AAAGGAAGAAGATTCATAGG+GGG | - | chr2_2:11698554-11698573 | None:intergenic | 35.0% | |
| GAAAGGAAGAAGATTCATAG+GGG | - | chr2_2:11698555-11698574 | None:intergenic | 35.0% | |
| !! | ACATTTAGTCTTACCCAATG+TGG | - | chr2_2:11698682-11698701 | None:intergenic | 35.0% |
| !! | TAGTTTTACCCCAGAAAGAT+AGG | + | chr2_2:11698751-11698770 | Msa0238280:intron | 35.0% |
| ACCAGAAAACCTATCTTTCT+GGG | - | chr2_2:11698763-11698782 | None:intergenic | 35.0% | |
| AGATAATTGTTGCACTTGGA+AGG | - | chr2_2:11699406-11699425 | None:intergenic | 35.0% | |
| GGTAAGATAATTGTTGCACT+TGG | - | chr2_2:11699410-11699429 | None:intergenic | 35.0% | |
| TTTGAATTTGACCCATTCAG+TGG | - | chr2_2:11699431-11699450 | None:intergenic | 35.0% | |
| ACAATTGTCTTACACTGGAT+GGG | - | chr2_2:11699608-11699627 | None:intergenic | 35.0% | |
| AACAATTGTCTTACACTGGA+TGG | - | chr2_2:11699609-11699628 | None:intergenic | 35.0% | |
| TGTAAGACAATTGTTGCAGT+TGG | + | chr2_2:11699614-11699633 | Msa0238280:intron | 35.0% | |
| GGTAAGATGATTGTTGTAGT+TGG | - | chr2_2:11699650-11699669 | None:intergenic | 35.0% | |
| ! | CAATCATCTTACCTCTGAAA+TGG | + | chr2_2:11699657-11699676 | Msa0238280:intron | 35.0% |
| !! | ATCATCTTACCTCTGAAATG+GGG | + | chr2_2:11699659-11699678 | Msa0238280:intron | 35.0% |
| TTGAATTTACCCCATTTCAG+AGG | - | chr2_2:11699671-11699690 | None:intergenic | 35.0% | |
| TTCAAACTTGCCAAACAACA+TGG | + | chr2_2:11699686-11699705 | Msa0238280:intron | 35.0% | |
| TTAAGGAATGGACCTCATTT+CGG | - | chr2_2:11699801-11699820 | None:intergenic | 35.0% | |
| AGGTATTAGGTGTTAAGGAA+TGG | - | chr2_2:11699813-11699832 | None:intergenic | 35.0% | |
| !! | GATGAAGGTATTAGGTGTTA+AGG | - | chr2_2:11699818-11699837 | None:intergenic | 35.0% |
| !! | CTGGTTTAGATGAAGGTATT+AGG | - | chr2_2:11699826-11699845 | None:intergenic | 35.0% |
| GGTAAGACAATTGTTGTAGT+TGG | + | chr2_2:11699944-11699963 | Msa0238280:intron | 35.0% | |
| CAACTGAATGAATTCTACCA+AGG | - | chr2_2:11700213-11700232 | None:intergenic | 35.0% | |
| GACGTTCATGCAAAATTCAA+CGG | - | chr2_2:11700297-11700316 | None:intergenic | 35.0% | |
| !!! | AGTTGAAGGAATTTTGGAGT+TGG | + | chr2_2:11700798-11700817 | Msa0238280:intron | 35.0% |
| !!! | GTTGAAGGAATTTTGGAGTT+GGG | + | chr2_2:11700799-11700818 | Msa0238280:intron | 35.0% |
| AACTAGCGCAAGTTAACTTA+CGG | + | chr2_2:11700955-11700974 | Msa0238280:intron | 35.0% | |
| CTCTCATGATGTTAATCTCA+TGG | + | chr2_2:11701086-11701105 | Msa0238280:intron | 35.0% | |
| AATTTCAAAATTGGGTACGC+AGG | + | chr2_2:11701555-11701574 | Msa0238280:intron | 35.0% | |
| CTAGTATCAAGATTCATGCA+TGG | + | chr2_2:11701685-11701704 | Msa0238280:CDS | 35.0% | |
| CAATTATTGGCAACAATGAG+AGG | - | chr2_2:11701735-11701754 | None:intergenic | 35.0% | |
| CTCTCATTGTTGCCAATAAT+TGG | + | chr2_2:11701733-11701752 | Msa0238280:CDS | 35.0% | |
| TCATTGTTGCCAATAATTGG+TGG | + | chr2_2:11701736-11701755 | Msa0238280:CDS | 35.0% | |
| GGGAGCTATGATATCAAATT+TGG | + | chr2_2:11701892-11701911 | Msa0238280:CDS | 35.0% | |
| TCAAGTGGAAGTAAGCCAAA+GGG | - | chr2_2:11696949-11696968 | None:intergenic | 40.0% | |
| TTCAAGTGGAAGTAAGCCAA+AGG | - | chr2_2:11696950-11696969 | None:intergenic | 40.0% | |
| GGTAAAGAGCAGAATTCAAG+TGG | - | chr2_2:11696964-11696983 | None:intergenic | 40.0% | |
| AACGCATGTTAACATGCGTA+GGG | - | chr2_2:11697028-11697047 | None:intergenic | 40.0% | |
| TAACGCATGTTAACATGCGT+AGG | - | chr2_2:11697029-11697048 | None:intergenic | 40.0% | |
| GCAAGTTAACTCACTCTAGT+TGG | + | chr2_2:11697094-11697113 | Msa0238280:intron | 40.0% | |
| GTTGAAAAGCTGACCAAAGT+TGG | - | chr2_2:11697142-11697161 | None:intergenic | 40.0% | |
| ! | GGAATATGGGAAGTATGTGA+GGG | - | chr2_2:11697260-11697279 | None:intergenic | 40.0% |
| ! | AGGAATATGGGAAGTATGTG+AGG | - | chr2_2:11697261-11697280 | None:intergenic | 40.0% |
| GAGAATTAGAGTGAGAGAGT+GGG | - | chr2_2:11697297-11697316 | None:intergenic | 40.0% | |
| AGAGAATTAGAGTGAGAGAG+TGG | - | chr2_2:11697298-11697317 | None:intergenic | 40.0% | |
| AAAATAGTGAGTAGCCGACT+TGG | + | chr2_2:11697386-11697405 | Msa0238280:intron | 40.0% | |
| ! | AAATAGTGAGTAGCCGACTT+GGG | + | chr2_2:11697387-11697406 | Msa0238280:intron | 40.0% |
| AAATAGTGAGCAGCCTTCTT+GGG | - | chr2_2:11697547-11697566 | None:intergenic | 40.0% | |
| AAAATAGTGAGCAGCCTTCT+TGG | - | chr2_2:11697548-11697567 | None:intergenic | 40.0% | |
| TTTGGTCGGTTATTCAACCA+TGG | - | chr2_2:11698223-11698242 | None:intergenic | 40.0% | |
| ! | AGAACACGTTTGTTGGACTT+TGG | - | chr2_2:11698241-11698260 | None:intergenic | 40.0% |
| CAACTCAAGAACACGTTTGT+TGG | - | chr2_2:11698248-11698267 | None:intergenic | 40.0% | |
| TTAACTCACGCTAATTAGGC+CGG | - | chr2_2:11698277-11698296 | None:intergenic | 40.0% | |
| ACTCACGCTAGTGTTAATCA+TGG | + | chr2_2:11698361-11698380 | Msa0238280:intron | 40.0% | |
| CTCACGCTAGTGTTAATCAT+GGG | + | chr2_2:11698362-11698381 | Msa0238280:intron | 40.0% | |
| ATAGGGGGAGATTGTAACAT+AGG | - | chr2_2:11698476-11698495 | None:intergenic | 40.0% | |
| GAGGAAATAGGGAAGTTTAG+AGG | - | chr2_2:11698506-11698525 | None:intergenic | 40.0% | |
| ! | ATGATAAGTAGTGGGAATGC+TGG | + | chr2_2:11698617-11698636 | Msa0238280:intron | 40.0% |
| ! | TGATAAGTAGTGGGAATGCT+GGG | + | chr2_2:11698618-11698637 | Msa0238280:intron | 40.0% |
| TAAGTAGTGAGCAGCTTTCT+TGG | + | chr2_2:11698648-11698667 | Msa0238280:intron | 40.0% | |
| AAGTAGTGAGCAGCTTTCTT+GGG | + | chr2_2:11698649-11698668 | Msa0238280:intron | 40.0% | |
| TCTTGGGAAAAGAACCACAT+TGG | + | chr2_2:11698665-11698684 | Msa0238280:intron | 40.0% | |
| CTTGGGAAAAGAACCACATT+GGG | + | chr2_2:11698666-11698685 | Msa0238280:intron | 40.0% | |
| !!! | TGCAGATTTAGTTTTACCCC+AGG | + | chr2_2:11698701-11698720 | Msa0238280:intron | 40.0% |
| !!! | GATTTAGTTTTACCCCAGGA+AGG | + | chr2_2:11698705-11698724 | Msa0238280:intron | 40.0% |
| ACAAGAAAACCAACCTTCCT+GGG | - | chr2_2:11698721-11698740 | None:intergenic | 40.0% | |
| CCAGAAAACCTATCTTTCTG+GGG | - | chr2_2:11698762-11698781 | None:intergenic | 40.0% | |
| CACCAGAAAACCTATCTTTC+TGG | - | chr2_2:11698764-11698783 | None:intergenic | 40.0% | |
| ! | CAGAAAGATAGGTTTTCTGG+TGG | + | chr2_2:11698762-11698781 | Msa0238280:intron | 40.0% |
| !! | ATTCAAACTTGCTAAGCAGC+AGG | + | chr2_2:11699444-11699463 | Msa0238280:intron | 40.0% |
| TCAAGATGCTCATCGAATGT+TGG | - | chr2_2:11699553-11699572 | None:intergenic | 40.0% | |
| ATTCAAGTGCCAACGAAATG+AGG | + | chr2_2:11699501-11699520 | Msa0238280:intron | 40.0% | |
| GGTATTCAAGTGTCAAGGAA+TGG | - | chr2_2:11699528-11699547 | None:intergenic | 40.0% | |
| ACGATGGTATTCAAGTGTCA+AGG | - | chr2_2:11699533-11699552 | None:intergenic | 40.0% | |
| TCAAGATGCTCATCGAATGT+TGG | + | chr2_2:11699553-11699572 | Msa0238280:intron | 40.0% | |
| CAATTGTCTTACACTGGATG+GGG | - | chr2_2:11699607-11699626 | None:intergenic | 40.0% | |
| CTGCAACAATTGTCTTACAC+TGG | - | chr2_2:11699613-11699632 | None:intergenic | 40.0% | |
| ATGCTTGAGTCCATGTTGTT+TGG | - | chr2_2:11699699-11699718 | None:intergenic | 40.0% | |
| !! | TGTTAGGCTGGTTTAGATGA+AGG | - | chr2_2:11699833-11699852 | None:intergenic | 40.0% |
| AAGGACTCAAGTATTTCGCT+CGG | - | chr2_2:11699890-11699909 | None:intergenic | 40.0% | |
| TTCAAATTTGCCAAACGGCA+AGG | - | chr2_2:11699909-11699928 | None:intergenic | 40.0% | |
| CAGAAGATCGTCGTTAGTTA+GGG | - | chr2_2:11699981-11700000 | None:intergenic | 40.0% | |
| ! | AAACGTGACGAGCATGTTTT+GGG | - | chr2_2:11700085-11700104 | None:intergenic | 40.0% |
| ! | AAAACGTGACGAGCATGTTT+TGG | - | chr2_2:11700086-11700105 | None:intergenic | 40.0% |
| TGTAACGTTAAGAGGTCTCA+AGG | - | chr2_2:11700238-11700257 | None:intergenic | 40.0% | |
| GACCTCTTAACGTTACATCA+AGG | + | chr2_2:11700241-11700260 | Msa0238280:intron | 40.0% | |
| TGCCTTGATGTAACGTTAAG+AGG | - | chr2_2:11700246-11700265 | None:intergenic | 40.0% | |
| AAACTCAGAGGTTGAAGGTT+CGG | - | chr2_2:11700269-11700288 | None:intergenic | 40.0% | |
| GTTCATGCAAAATTCAACGG+CGG | - | chr2_2:11700294-11700313 | None:intergenic | 40.0% | |
| ! | TGTAGATTTGAAGCAATGGC+CGG | - | chr2_2:11700327-11700346 | None:intergenic | 40.0% |
| TTGCGTGATGTTATTAGTCC+AGG | - | chr2_2:11700890-11700909 | None:intergenic | 40.0% | |
| ATCGCATGTTAACATGCGTA+GGG | + | chr2_2:11700978-11700997 | Msa0238280:intron | 40.0% | |
| AAACTGTTTGGGTAAAGAGC+AGG | + | chr2_2:11701032-11701051 | Msa0238280:intron | 40.0% | |
| ! | TGTTAATCTCATGGGCTACT+AGG | + | chr2_2:11701095-11701114 | Msa0238280:intron | 40.0% |
| ! | GTTAATCTCATGGGCTACTA+GGG | + | chr2_2:11701096-11701115 | Msa0238280:intron | 40.0% |
| ! | GTTTTCACTTTCACTAGCAC+TGG | + | chr2_2:11701206-11701225 | Msa0238280:intron | 40.0% |
| GTACTGTTGAAAAGTGGCAT+CGG | - | chr2_2:11701346-11701365 | None:intergenic | 40.0% | |
| GTGTCAGTACTGTTGAAAAG+TGG | - | chr2_2:11701352-11701371 | None:intergenic | 40.0% | |
| !! | TTCAACAGTACTGACACTTC+AGG | + | chr2_2:11701355-11701374 | Msa0238280:intron | 40.0% |
| CTATGTGTCAGTATAGTGTC+TGG | + | chr2_2:11701456-11701475 | Msa0238280:intron | 40.0% | |
| !!! | TAGTGTCTGGTTTTTGTGTC+TGG | + | chr2_2:11701469-11701488 | Msa0238280:intron | 40.0% |
| CTATGTGTGAGTGTAATGTC+AGG | + | chr2_2:11701502-11701521 | Msa0238280:intron | 40.0% | |
| TTCACTCACATCATCAAGAG+TGG | + | chr2_2:11701643-11701662 | Msa0238280:CDS | 40.0% | |
| ATGAGAGGTAAACTGGCATA+GGG | - | chr2_2:11701720-11701739 | None:intergenic | 40.0% | |
| AATGAGAGGTAAACTGGCAT+AGG | - | chr2_2:11701721-11701740 | None:intergenic | 40.0% | |
| AGTGCACAACCACCAATTAT+TGG | - | chr2_2:11701748-11701767 | None:intergenic | 40.0% | |
| ATGAATGGGATGAGTGTTAG+TGG | + | chr2_2:11701950-11701969 | Msa0238280:CDS | 40.0% | |
| !!! | ACCTTTTGCTATTGCTGTTG+AGG | + | chr2_2:11702021-11702040 | Msa0238280:CDS | 40.0% |
| !!! | CCTTTTGCTATTGCTGTTGA+GGG | + | chr2_2:11702022-11702041 | Msa0238280:CDS | 40.0% |
| TGTTGAGGGTCCTAAAGTTT+GGG | + | chr2_2:11702036-11702055 | Msa0238280:CDS | 40.0% | |
| CAAACAGCTGTGTCTCAAAT+TGG | + | chr2_2:11702070-11702089 | Msa0238280:CDS | 40.0% | |
| ! | TTTTAATGTTTGCAGGTGGG+TGG | + | chr2_2:11702227-11702246 | Msa0238280:intron | 40.0% |
| TCTCCCTTGACATTTAGCAT+AGG | + | chr2_2:11702312-11702331 | Msa0238280:CDS | 40.0% | |
| TGAAAGGCAGAGAGGTTTCT+TGG | - | chr2_2:11696704-11696723 | None:intergenic | 45.0% | |
| GACAGAATGTCAAGCCTATG+AGG | + | chr2_2:11696771-11696790 | Msa0238280:CDS | 45.0% | |
| CCTTGATCTATCAGCCTCAT+AGG | - | chr2_2:11696788-11696807 | None:intergenic | 45.0% | |
| CCTATGAGGCTGATAGATCA+AGG | + | chr2_2:11696785-11696804 | Msa0238280:CDS | 45.0% | |
| GCAGCTCAAAAGCTCAAGAT+TGG | + | chr2_2:11696844-11696863 | Msa0238280:CDS | 45.0% | |
| GAATGCCTTTCCTTACCCTT+TGG | + | chr2_2:11696931-11696950 | Msa0238280:intron | 45.0% | |
| GTAAGCCAAAGGGTAAGGAA+AGG | - | chr2_2:11696939-11696958 | None:intergenic | 45.0% | |
| TGGAAGTAAGCCAAAGGGTA+AGG | - | chr2_2:11696944-11696963 | None:intergenic | 45.0% | |
| !!! | TAACATGCGTAGGGGCATTT+TGG | - | chr2_2:11697019-11697038 | None:intergenic | 45.0% |
| ACGCATGTTAACATGCGTAG+GGG | - | chr2_2:11697027-11697046 | None:intergenic | 45.0% | |
| ! | TAACTTGCGCTAGTGCTAAG+TGG | - | chr2_2:11697082-11697101 | None:intergenic | 45.0% |
| AATTAGAGTGAGAGAGTGGG+AGG | - | chr2_2:11697294-11697313 | None:intergenic | 45.0% | |
| !! | AATAGTGAGTAGCCGACTTG+GGG | + | chr2_2:11697388-11697407 | Msa0238280:intron | 45.0% |
| ! | ACCGCAGAAACTTTTTACCG+TGG | + | chr2_2:11697452-11697471 | Msa0238280:intron | 45.0% |
| CCCACGGTAAAAAGTTTCTG+CGG | - | chr2_2:11697456-11697475 | None:intergenic | 45.0% | |
| ! | CCGCAGAAACTTTTTACCGT+GGG | + | chr2_2:11697453-11697472 | Msa0238280:intron | 45.0% |
| AATAGTGAGCAGCCTTCTTG+GGG | - | chr2_2:11697546-11697565 | None:intergenic | 45.0% | |
| ! | CACGTTTGTTGGACTTTGGT+CGG | - | chr2_2:11698237-11698256 | None:intergenic | 45.0% |
| ! | TGTTCTTGAGTTGTGACCAC+CGG | + | chr2_2:11698255-11698274 | Msa0238280:intron | 45.0% |
| CTCACGCTAGTGTTAATCCT+TGG | + | chr2_2:11698329-11698348 | Msa0238280:intron | 45.0% | |
| GGAGATGGTGTGAGGAAATA+GGG | - | chr2_2:11698517-11698536 | None:intergenic | 45.0% | |
| ! | GATAAGTAGTGGGAATGCTG+GGG | + | chr2_2:11698619-11698638 | Msa0238280:intron | 45.0% |
| !! | TAGTTTTACCCCAGGAAGGT+TGG | + | chr2_2:11698709-11698728 | Msa0238280:intron | 45.0% |
| CAAGAAAACCAACCTTCCTG+GGG | - | chr2_2:11698720-11698739 | None:intergenic | 45.0% | |
| CACAAGAAAACCAACCTTCC+TGG | - | chr2_2:11698722-11698741 | None:intergenic | 45.0% | |
| !!! | CAGGAAGGTTGGTTTTCTTG+TGG | + | chr2_2:11698720-11698739 | Msa0238280:intron | 45.0% |
| ! | CCCCAGAAAGATAGGTTTTC+TGG | + | chr2_2:11698759-11698778 | Msa0238280:intron | 45.0% |
| ! | TGCACTTGGAAGGTACATTC+TGG | - | chr2_2:11699396-11699415 | None:intergenic | 45.0% |
| TCGATGAGCATCTTGAACGA+TGG | + | chr2_2:11699477-11699496 | Msa0238280:intron | 45.0% | |
| AGGAATGGACCTCATTTCGT+TGG | - | chr2_2:11699513-11699532 | None:intergenic | 45.0% | |
| TCGATGAGCATCTTGAACGA+TGG | - | chr2_2:11699477-11699496 | None:intergenic | 45.0% | |
| ATTCAAGTGCCACCGAAATG+AGG | + | chr2_2:11699786-11699805 | Msa0238280:intron | 45.0% | |
| ATACTTGAGTCCTTGCCGTT+TGG | + | chr2_2:11699896-11699915 | Msa0238280:intron | 45.0% | |
| GATCGTCGTTAGTTAGGGTA+AGG | - | chr2_2:11699976-11699995 | None:intergenic | 45.0% | |
| CCAGAAGATCGTCGTTAGTT+AGG | - | chr2_2:11699982-11700001 | None:intergenic | 45.0% | |
| CCTAACTAACGACGATCTTC+TGG | + | chr2_2:11699979-11699998 | Msa0238280:intron | 45.0% | |
| AACTAACGACGATCTTCTGG+AGG | + | chr2_2:11699982-11700001 | Msa0238280:intron | 45.0% | |
| AGTTCCAGTGGATCGATATG+CGG | - | chr2_2:11700053-11700072 | None:intergenic | 45.0% | |
| CATATCGATCCACTGGAACT+TGG | + | chr2_2:11700053-11700072 | Msa0238280:intron | 45.0% | |
| !! | GAGAGTATCATTCACTTGGG+TGG | - | chr2_2:11700124-11700143 | None:intergenic | 45.0% |
| !! | GGGGAGAGTATCATTCACTT+GGG | - | chr2_2:11700127-11700146 | None:intergenic | 45.0% |
| !! | AGGGGAGAGTATCATTCACT+TGG | - | chr2_2:11700128-11700147 | None:intergenic | 45.0% |
| ! | GTAGATTTGAAGCAATGGCC+GGG | - | chr2_2:11700326-11700345 | None:intergenic | 45.0% |
| GATCGCATGTTAACATGCGT+AGG | + | chr2_2:11700977-11700996 | Msa0238280:intron | 45.0% | |
| TCGCATGTTAACATGCGTAG+GGG | + | chr2_2:11700979-11700998 | Msa0238280:intron | 45.0% | |
| TGGGAGTGAGCAAAACTGTT+TGG | + | chr2_2:11701020-11701039 | Msa0238280:intron | 45.0% | |
| GGGAGTGAGCAAAACTGTTT+GGG | + | chr2_2:11701021-11701040 | Msa0238280:intron | 45.0% | |
| GCAGCTAAGGATAAAGTGGA+AGG | - | chr2_2:11701061-11701080 | None:intergenic | 45.0% | |
| TCCACTTTATCCTTAGCTGC+TGG | + | chr2_2:11701061-11701080 | Msa0238280:intron | 45.0% | |
| ACCAGCAGCTAAGGATAAAG+TGG | - | chr2_2:11701065-11701084 | None:intergenic | 45.0% | |
| ! | TGAGGCCCCAAAAGTTGATT+TGG | + | chr2_2:11701123-11701142 | Msa0238280:intron | 45.0% |
| TGTGAGTGTAATGTCAGGTC+CGG | + | chr2_2:11701507-11701526 | Msa0238280:intron | 45.0% | |
| GTGGGCACTAATAATAACCC+CGG | - | chr2_2:11701529-11701548 | None:intergenic | 45.0% | |
| TAGCTGTGGCACACACAATT+GGG | + | chr2_2:11701578-11701597 | Msa0238280:CDS | 45.0% | |
| CATCATCAAGAGTGGAGAAC+CGG | + | chr2_2:11701651-11701670 | Msa0238280:CDS | 45.0% | |
| GGCAACAATGAGAGGTAAAC+TGG | - | chr2_2:11701727-11701746 | None:intergenic | 45.0% | |
| CCCTCAACAGCAATAGCAAA+AGG | - | chr2_2:11702025-11702044 | None:intergenic | 45.0% | |
| CTGTTGAGGGTCCTAAAGTT+TGG | + | chr2_2:11702035-11702054 | Msa0238280:CDS | 45.0% | |
| GGGAATGAGCAGAACCGTTT+GGG | - | chr2_2:11696985-11697004 | None:intergenic | 50.0% | |
| TGGGAATGAGCAGAACCGTT+TGG | - | chr2_2:11696986-11697005 | None:intergenic | 50.0% | |
| GAGTGGGAGGAGATAATGTG+AGG | - | chr2_2:11697281-11697300 | None:intergenic | 50.0% | |
| GGGAGATGGTGTGAGGAAAT+AGG | - | chr2_2:11698518-11698537 | None:intergenic | 50.0% | |
| TGAGAATGGGAGATGGTGTG+AGG | - | chr2_2:11698525-11698544 | None:intergenic | 50.0% | |
| GAGAGAGTGAGAATGGGAGA+TGG | - | chr2_2:11698532-11698551 | None:intergenic | 50.0% | |
| TAGGGGGAGAGAGTGAGAAT+GGG | - | chr2_2:11698538-11698557 | None:intergenic | 50.0% | |
| ATAGGGGGAGAGAGTGAGAA+TGG | - | chr2_2:11698539-11698558 | None:intergenic | 50.0% | |
| AGGAATGGACCTCATTTCGG+TGG | - | chr2_2:11699798-11699817 | None:intergenic | 50.0% | |
| GTTCCAGTGGATCGATATGC+GGG | - | chr2_2:11700052-11700071 | None:intergenic | 50.0% | |
| AAACGTCCAAAGCTCGACGA+GGG | - | chr2_2:11700147-11700166 | None:intergenic | 50.0% | |
| TAAACGTCCAAAGCTCGACG+AGG | - | chr2_2:11700148-11700167 | None:intergenic | 50.0% | |
| TTGCACCCTTCTTGTGTCTC+TGG | + | chr2_2:11700179-11700198 | Msa0238280:intron | 50.0% | |
| TGCACCCTTCTTGTGTCTCT+GGG | + | chr2_2:11700180-11700199 | Msa0238280:intron | 50.0% | |
| CAACCCCAGAGACACAAGAA+GGG | - | chr2_2:11700187-11700206 | None:intergenic | 50.0% | |
| TCAACCCCAGAGACACAAGA+AGG | - | chr2_2:11700188-11700207 | None:intergenic | 50.0% | |
| CGGAGAAACTCAGAGGTTGA+AGG | - | chr2_2:11700274-11700293 | None:intergenic | 50.0% | |
| AGGCAGAATGAAGTTCTGCC+TGG | + | chr2_2:11700869-11700888 | Msa0238280:intron | 50.0% | |
| CATGAGAGAACCAGCAGCTA+AGG | - | chr2_2:11701074-11701093 | None:intergenic | 50.0% | |
| GTGAGTGTAATGTCAGGTCC+GGG | + | chr2_2:11701508-11701527 | Msa0238280:intron | 50.0% | |
| TGAGTGTAATGTCAGGTCCG+GGG | + | chr2_2:11701509-11701528 | Msa0238280:intron | 50.0% | |
| GTAGCTGTGGCACACACAAT+TGG | + | chr2_2:11701577-11701596 | Msa0238280:CDS | 50.0% | |
| CAACCAGCAGCCCAAACTTT+AGG | - | chr2_2:11702049-11702068 | None:intergenic | 50.0% | |
| CTAAAGTTTGGGCTGCTGGT+TGG | + | chr2_2:11702047-11702066 | Msa0238280:CDS | 50.0% | |
| GGTCGATCACTTCCCCAAGT+CGG | - | chr2_2:11697403-11697422 | None:intergenic | 55.0% | |
| TTGGGGAAGTGATCGACCCT+TGG | + | chr2_2:11697405-11697424 | Msa0238280:intron | 55.0% | |
| TGGGGAAGTGATCGACCCTT+GGG | + | chr2_2:11697406-11697425 | Msa0238280:intron | 55.0% | |
| ACTCACGCTAATTAGGCCGG+TGG | - | chr2_2:11698274-11698293 | None:intergenic | 55.0% | |
| GCGTGAGTTAACTCACGCAC+AGG | - | chr2_2:11698316-11698335 | None:intergenic | 55.0% | |
| GCGTGAGTTAACTCACGCCA+AGG | - | chr2_2:11698349-11698368 | None:intergenic | 55.0% | |
| TCACCCGCATATCGATCCAC+TGG | + | chr2_2:11700046-11700065 | Msa0238280:intron | 55.0% | |
| AACGTCCAAAGCTCGACGAG+GGG | - | chr2_2:11700146-11700165 | None:intergenic | 55.0% | |
| GCACCCTTCTTGTGTCTCTG+GGG | + | chr2_2:11700181-11700200 | Msa0238280:intron | 55.0% | |
| !! | TGTCTCTGGGGTTGACTCCT+TGG | + | chr2_2:11700193-11700212 | Msa0238280:intron | 55.0% |
| TCAACGGCGGAGAAACTCAG+AGG | - | chr2_2:11700281-11700300 | None:intergenic | 55.0% | |
| TGCATGAACGTCGATCCACC+CGG | + | chr2_2:11700305-11700324 | Msa0238280:intron | 55.0% | |
| ! | GATTTGAAGCAATGGCCGGG+TGG | - | chr2_2:11700323-11700342 | None:intergenic | 55.0% |
| ! | ATGGGCTACTAGGGTTGCTG+AGG | + | chr2_2:11701105-11701124 | Msa0238280:intron | 55.0% |
| ATTGGGTACGCAGGTAGCTG+TGG | + | chr2_2:11701564-11701583 | Msa0238280:intron | 55.0% | |
| GGTCCTAAAGTTTGGGCTGC+TGG | + | chr2_2:11702043-11702062 | Msa0238280:CDS | 55.0% | |
| ! | GGGAGCACACCAAGTTCCAG+TGG | - | chr2_2:11700065-11700084 | None:intergenic | 60.0% |
| ACTCTCCCCTCGTCGAGCTT+TGG | + | chr2_2:11700138-11700157 | Msa0238280:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 11696679 | 11702362 | 11696679 | ID=Msa0238280;Name=Msa0238280 |
| chr2_2 | mRNA | 11696679 | 11702362 | 11696679 | ID=Msa0238280-mRNA-1;Parent=Msa0238280;Name=Msa0238280-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0.66|0.5|1|1|0.75|4|0|259 |
| chr2_2 | exon | 11696679 | 11696885 | 11696679 | ID=Msa0238280-mRNA-1:exon:5079;Parent=Msa0238280-mRNA-1 |
| chr2_2 | exon | 11701577 | 11701802 | 11701577 | ID=Msa0238280-mRNA-1:exon:5080;Parent=Msa0238280-mRNA-1 |
| chr2_2 | exon | 11701885 | 11702107 | 11701885 | ID=Msa0238280-mRNA-1:exon:5081;Parent=Msa0238280-mRNA-1 |
| chr2_2 | exon | 11702242 | 11702362 | 11702242 | ID=Msa0238280-mRNA-1:exon:5082;Parent=Msa0238280-mRNA-1 |
| chr2_2 | CDS | 11696679 | 11696885 | 11696679 | ID=Msa0238280-mRNA-1:cds;Parent=Msa0238280-mRNA-1 |
| chr2_2 | CDS | 11701577 | 11701802 | 11701577 | ID=Msa0238280-mRNA-1:cds;Parent=Msa0238280-mRNA-1 |
| chr2_2 | CDS | 11701885 | 11702107 | 11701885 | ID=Msa0238280-mRNA-1:cds;Parent=Msa0238280-mRNA-1 |
| chr2_2 | CDS | 11702242 | 11702362 | 11702242 | ID=Msa0238280-mRNA-1:cds;Parent=Msa0238280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
