Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386740 | XP_024635309.1 | 94.206 | 535 | 14 | 1 | 1 | 535 | 1 | 518 | 0.0 | 1041 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386740 | sp|Q00081|GLGL1_SOLTU | 73.868 | 486 | 110 | 1 | 50 | 535 | 2 | 470 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386740 | G7J745 | 94.206 | 535 | 14 | 1 | 1 | 535 | 1 | 518 | 0.0 | 1041 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0196370 | Msa0386740 | 0.806722 | 7.166395e-50 | -8.615850e-47 |
| Msa0225680 | Msa0386740 | 0.810609 | 1.058450e-50 | -8.615850e-47 |
| Msa0238260 | Msa0386740 | 0.835803 | 1.356250e-56 | -8.615850e-47 |
| Msa0238280 | Msa0386740 | 0.830451 | 2.915717e-55 | -8.615850e-47 |
| Msa0386740 | Msa0415620 | 0.807214 | 5.638528e-50 | -8.615850e-47 |
| Msa0386740 | Msa0490730 | -0.802792 | 4.741989e-49 | -8.615850e-47 |
| Msa0386740 | Msa0523780 | 0.837055 | 6.514985e-57 | -8.615850e-47 |
| Msa0386740 | Msa0873220 | 0.811908 | 5.532874e-51 | -8.615850e-47 |
| Msa0386740 | Msa0906610 | 0.806640 | 7.456032e-50 | -8.615850e-47 |
| Msa0386740 | Msa0938480 | 0.827188 | 1.795559e-54 | -8.615850e-47 |
| Msa0386740 | Msa1368500 | 0.884792 | 1.416542e-71 | -8.615850e-47 |
| Msa0386740 | Msa1422420 | 0.807366 | 5.234669e-50 | -8.615850e-47 |
| Msa0275690 | Msa0386740 | 0.858462 | 8.101423e-63 | -8.615850e-47 |
| Msa0316270 | Msa0386740 | 0.826374 | 2.809011e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386740 | MtrunA17_Chr4g0035171 | 77.248 | 545 | 97 | 3 | 1 | 535 | 1 | 528 | 0.0 | 877 |
| Msa0386740 | MtrunA17_Chr3g0141761 | 66.027 | 521 | 156 | 4 | 17 | 535 | 29 | 530 | 0.0 | 710 |
| Msa0386740 | MtrunA17_Chr3g0144741 | 92.113 | 355 | 11 | 1 | 1 | 355 | 1 | 338 | 0.0 | 671 |
| Msa0386740 | MtrunA17_Chr4g0074531 | 64.770 | 457 | 143 | 2 | 80 | 535 | 82 | 521 | 0.0 | 644 |
| Msa0386740 | MtrunA17_Chr7g0271011 | 58.071 | 539 | 195 | 6 | 9 | 535 | 17 | 536 | 0.0 | 628 |
| Msa0386740 | MtrunA17_Chr5g0447341 | 52.941 | 442 | 183 | 7 | 97 | 535 | 96 | 515 | 2.24e-162 | 471 |
| Msa0386740 | MtrunA17_Chr3g0120471 | 52.941 | 442 | 180 | 7 | 97 | 535 | 95 | 511 | 9.41e-160 | 464 |
| Msa0386740 | MtrunA17_Chr0c30g0494071 | 48.163 | 490 | 125 | 9 | 80 | 535 | 21 | 415 | 4.25e-147 | 429 |
| Msa0386740 | MtrunA17_Chr3g0144731 | 96.178 | 157 | 6 | 0 | 379 | 535 | 5 | 161 | 1.01e-106 | 316 |
| Msa0386740 | MtrunA17_Chr4g0077071 | 42.500 | 80 | 45 | 1 | 368 | 446 | 2 | 81 | 1.06e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386740 | AT4G39210.2 | 68.421 | 532 | 148 | 4 | 4 | 535 | 10 | 521 | 0.0 | 750 |
| Msa0386740 | AT4G39210.1 | 68.421 | 532 | 148 | 4 | 4 | 535 | 10 | 521 | 0.0 | 750 |
| Msa0386740 | AT2G21590.2 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.3 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.5 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.4 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.7 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.1 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT2G21590.6 | 68.053 | 529 | 150 | 3 | 7 | 535 | 14 | 523 | 0.0 | 733 |
| Msa0386740 | AT1G27680.1 | 69.777 | 493 | 128 | 3 | 44 | 535 | 46 | 518 | 0.0 | 720 |
| Msa0386740 | AT5G19220.1 | 64.254 | 456 | 146 | 1 | 80 | 535 | 84 | 522 | 0.0 | 643 |
| Msa0386740 | AT5G48300.1 | 53.167 | 442 | 182 | 6 | 97 | 535 | 101 | 520 | 3.38e-163 | 474 |
| Msa0386740 | AT1G05610.1 | 38.806 | 469 | 252 | 11 | 70 | 535 | 40 | 476 | 8.33e-105 | 323 |
| Msa0386740 | AT1G05610.2 | 38.559 | 472 | 255 | 11 | 70 | 535 | 40 | 482 | 1.63e-104 | 322 |
Find 172 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAAGTAAAATAAATTA+AGG | 0.198905 | 3_1:+90519061 | Msa0386740:three_prime_UTR |
| AGGAAAGGAAGTTGCCTTTA+TGG | 0.200848 | 3_1:-90515101 | None:intergenic |
| GAGTAACACTTACTTAATTT+TGG | 0.212813 | 3_1:-90518496 | None:intergenic |
| CATATCGCCCGCACCTATTT+TGG | 0.215257 | 3_1:+90516125 | Msa0386740:CDS |
| GTTCATTATTAATTTATTAT+AGG | 0.228741 | 3_1:+90514965 | Msa0386740:five_prime_UTR |
| GAAATGTTGTGTTGGGATTT+TGG | 0.247530 | 3_1:-90515047 | None:intergenic |
| CAGTGATACAATAATTTAAA+AGG | 0.248078 | 3_1:-90519141 | None:intergenic |
| AACACTCCCTCCCGCATCTT+TGG | 0.254491 | 3_1:+90518917 | Msa0386740:three_prime_UTR |
| GTTGATGCCATTACCAAAAT+AGG | 0.260803 | 3_1:-90516138 | None:intergenic |
| TAGGAGTATTTGTTTGTCTA+TGG | 0.261822 | 3_1:+90514984 | Msa0386740:five_prime_UTR |
| GATATCACTGCAATGGCTTC+TGG | 0.267251 | 3_1:+90515243 | Msa0386740:exon |
| CTCGCCATATATTGCATCTA+TGG | 0.272650 | 3_1:+90517327 | Msa0386740:CDS |
| AAATCATTCCTTCAGCTATA+AGG | 0.277518 | 3_1:+90517428 | Msa0386740:CDS |
| GAAAGATCACGTTTAGATTA+TGG | 0.279986 | 3_1:+90517980 | Msa0386740:CDS |
| CAGCATGTTTGATCTTCGTC+TGG | 0.284326 | 3_1:-90515395 | None:intergenic |
| AGATTATGGCGTTGAGCTTC+AGG | 0.286033 | 3_1:+90517994 | Msa0386740:CDS |
| AATGTAATTTCCATTGTATT+GGG | 0.289485 | 3_1:+90515700 | Msa0386740:CDS |
| CACTTGCAAGGGAGAGGATA+TGG | 0.290138 | 3_1:-90519109 | None:intergenic |
| AAATGTAATTTCCATTGTAT+TGG | 0.295734 | 3_1:+90515699 | Msa0386740:CDS |
| ATTTCTTGCACCTACCTCTT+TGG | 0.304070 | 3_1:-90517632 | None:intergenic |
| ACACTCCCTCCCGCATCTTT+GGG | 0.322517 | 3_1:+90518918 | Msa0386740:three_prime_UTR |
| TGCAAGAAGAGAAGCAATTT+CGG | 0.328432 | 3_1:-90518439 | None:intergenic |
| GAAAGCGGCATGTGTAAAAT+AGG | 0.331458 | 3_1:+90518981 | Msa0386740:three_prime_UTR |
| GGAGACTACTGGGAAGATAT+TGG | 0.344965 | 3_1:+90517571 | Msa0386740:CDS |
| AGCAAGGTTAGCATCGTAAA+AGG | 0.345758 | 3_1:-90517605 | None:intergenic |
| CGCGGGTGTTGCAGCTCGTT+TGG | 0.347912 | 3_1:-90515755 | None:intergenic |
| TTCAGCCGTGCATCAGATTA+CGG | 0.351349 | 3_1:+90517059 | Msa0386740:intron |
| TGAGCTTACCAAGGAACCTT+TGG | 0.354621 | 3_1:-90515448 | None:intergenic |
| ATTGACAAGAATGCAAAGAT+TGG | 0.362465 | 3_1:+90518620 | Msa0386740:CDS |
| CGGCAGTTGTCAATCTTTGT+TGG | 0.365264 | 3_1:-90517783 | None:intergenic |
| GAATCCAGGAGATGTGAAAA+TGG | 0.366447 | 3_1:-90517754 | None:intergenic |
| CACTTATTTCCTGCTTCTCC+TGG | 0.369510 | 3_1:-90516511 | None:intergenic |
| AAGAGAAGCAATTTCGGATT+CGG | 0.370014 | 3_1:-90518433 | None:intergenic |
| GAAGCTTCAACAACAGTTCC+TGG | 0.372443 | 3_1:+90515340 | Msa0386740:CDS |
| GAAACATCCATGGGAGATAA+TGG | 0.382042 | 3_1:-90517921 | None:intergenic |
| CTATTTATACAGTTGCTCAT+TGG | 0.382388 | 3_1:-90516047 | None:intergenic |
| AACAAGAAGAAACACATAAC+AGG | 0.383120 | 3_1:-90516931 | None:intergenic |
| TATAGCTGAAGGAATGATTT+CGG | 0.383531 | 3_1:-90517425 | None:intergenic |
| AAAATGGGTGTTGGGTTTAA+CGG | 0.384006 | 3_1:-90515274 | None:intergenic |
| ATCCTACATCTAATGACTTT+GGG | 0.387023 | 3_1:+90517401 | Msa0386740:CDS |
| TGGAGCTGTCATATAAATAA+TGG | 0.388609 | 3_1:+90518838 | Msa0386740:exon |
| TATCCTACATCTAATGACTT+TGG | 0.397963 | 3_1:+90517400 | Msa0386740:CDS |
| TTCACGAGAAATGTTGTGTT+GGG | 0.400240 | 3_1:-90515054 | None:intergenic |
| TCAATTCTGCTTCCCTCAAC+CGG | 0.402666 | 3_1:+90516102 | Msa0386740:CDS |
| GCTTTCAGATCAGCCCCTTT+CGG | 0.407207 | 3_1:-90517131 | None:intergenic |
| AATCATTCCTTCAGCTATAA+GGG | 0.414537 | 3_1:+90517429 | Msa0386740:CDS |
| CGGATGTAGAACCCATCTTC+TGG | 0.415604 | 3_1:-90518773 | None:intergenic |
| GTATTCCTTCCAATTCCAAT+TGG | 0.417493 | 3_1:-90518474 | None:intergenic |
| GAGCTTACCAAGGAACCTTT+GGG | 0.417954 | 3_1:-90515447 | None:intergenic |
| GGAAAGGTCCCAATTGGAAT+TGG | 0.427599 | 3_1:+90518465 | Msa0386740:CDS |
| AGCACACGAAATTGTAATAT+CGG | 0.428769 | 3_1:-90516881 | None:intergenic |
| TACAATTTCGTGTGCTGCTG+TGG | 0.429809 | 3_1:+90516888 | Msa0386740:CDS |
| TTTGGTAATGGCATCAACTT+TGG | 0.430851 | 3_1:+90516143 | Msa0386740:CDS |
| TGTCGAAAATGTATTGATCT+TGG | 0.433601 | 3_1:+90516709 | Msa0386740:CDS |
| TTCTCTTCTTGCAGAGGGAA+AGG | 0.438360 | 3_1:+90518449 | Msa0386740:CDS |
| AAGCAATTTCGGATTCGGTT+TGG | 0.438840 | 3_1:-90518428 | None:intergenic |
| TTTACAGGACACTGTAATGA+TGG | 0.445182 | 3_1:+90518392 | Msa0386740:intron |
| TGCGGGCGATATGCCGGTTG+AGG | 0.449127 | 3_1:-90516115 | None:intergenic |
| TCTTGCTCATACTTCCATAA+AGG | 0.453773 | 3_1:+90515087 | Msa0386740:five_prime_UTR |
| CGTGTGCTGCTGTGGGTGAC+AGG | 0.464034 | 3_1:+90516896 | Msa0386740:CDS |
| TTAGTGGCTATTTCATGAGC+TGG | 0.465861 | 3_1:+90518861 | Msa0386740:three_prime_UTR |
| AGATGATCCCAAAGGTTCCT+TGG | 0.467593 | 3_1:+90515440 | Msa0386740:CDS |
| TTGACAAGAATGCAAAGATT+GGG | 0.468391 | 3_1:+90518621 | Msa0386740:CDS |
| TCTATGATACTTGGAGCAAC+AGG | 0.469650 | 3_1:-90519212 | None:intergenic |
| TTTGTTGGTGGTAGGAATCC+AGG | 0.470257 | 3_1:-90517768 | None:intergenic |
| ATTGTATTGGGAGGAGGACC+AGG | 0.471865 | 3_1:+90515712 | Msa0386740:CDS |
| TGCCTTCATTTATGAGACTA+CGG | 0.472223 | 3_1:+90515665 | Msa0386740:CDS |
| AAGTAGATACCTCTCGTCTT+GGG | 0.473092 | 3_1:+90517281 | Msa0386740:CDS |
| TATTCCTTCCAATTCCAATT+GGG | 0.473128 | 3_1:-90518473 | None:intergenic |
| ATGAGCAACTGTATAAATAG+TGG | 0.474055 | 3_1:+90516050 | Msa0386740:CDS |
| GGATCATAAAACTGAAACTT+CGG | 0.474545 | 3_1:-90517723 | None:intergenic |
| GCAGGAAATAAGTGGTTTCA+AGG | 0.474657 | 3_1:+90516520 | Msa0386740:CDS |
| GTCTATCGGTCTATGATACT+TGG | 0.477449 | 3_1:-90519221 | None:intergenic |
| GAAAATGTATTGATCTTGGC+GGG | 0.477652 | 3_1:+90516713 | Msa0386740:CDS |
| ACACAAACACCAGGAGAAGC+AGG | 0.481113 | 3_1:+90516502 | Msa0386740:CDS |
| TCGCCATATATTGCATCTAT+GGG | 0.481636 | 3_1:+90517328 | Msa0386740:CDS |
| AGCTGGTTTCTCTGCGGCGT+CGG | 0.482030 | 3_1:+90518878 | Msa0386740:three_prime_UTR |
| ATTTCCATTGTATTGGGAGG+AGG | 0.482362 | 3_1:+90515706 | Msa0386740:CDS |
| GCAGAGGGAAAGGTCCCAAT+TGG | 0.488186 | 3_1:+90518459 | Msa0386740:CDS |
| AGGTGTCCTTTGCACTTGCA+AGG | 0.491764 | 3_1:-90519121 | None:intergenic |
| GTCATATAAATAATGGTTAG+TGG | 0.492267 | 3_1:+90518845 | Msa0386740:exon |
| ACAAAAGTAAAATAAATTAA+GGG | 0.497464 | 3_1:+90519062 | Msa0386740:three_prime_UTR |
| AGCAGGAATCACAGTCGTAA+TGG | 0.503836 | 3_1:+90518796 | Msa0386740:CDS |
| TGGTTTCTCTGCGGCGTCGG+AGG | 0.504394 | 3_1:+90518881 | Msa0386740:three_prime_UTR |
| AATAGGTGCGGGCGATATGC+CGG | 0.504786 | 3_1:-90516121 | None:intergenic |
| GTTTCTTGATATCACTGCAA+TGG | 0.505101 | 3_1:+90515236 | Msa0386740:exon |
| GTATGGTGACTGTTGCAAAA+TGG | 0.505746 | 3_1:+90518945 | Msa0386740:three_prime_UTR |
| ACAATTTACCTGGATATTTG+AGG | 0.505775 | 3_1:+90516561 | Msa0386740:CDS |
| GATGTGAAAATGGGTGTCTT+GGG | 0.507817 | 3_1:-90517744 | None:intergenic |
| AGATGTGAAAATGGGTGTCT+TGG | 0.507882 | 3_1:-90517745 | None:intergenic |
| CAAGTAGATACCTCTCGTCT+TGG | 0.508446 | 3_1:+90517280 | Msa0386740:CDS |
| AATGATTAGAGTGGTGATGA+AGG | 0.510104 | 3_1:-90515121 | None:intergenic |
| CAAGGTCCATGTAATCCATT+CGG | 0.514352 | 3_1:-90516748 | None:intergenic |
| AGCATGTTTGATCTTCGTCT+GGG | 0.516245 | 3_1:-90515394 | None:intergenic |
| TTTCACGAGAAATGTTGTGT+TGG | 0.518028 | 3_1:-90515055 | None:intergenic |
| CACTCCCTCCCGCATCTTTG+GGG | 0.518158 | 3_1:+90518919 | Msa0386740:three_prime_UTR |
| GTTGAATCGTACATTCTCTC+AGG | 0.518546 | 3_1:-90517943 | None:intergenic |
| CCTTTGCACTTGCAAGGGAG+AGG | 0.520026 | 3_1:-90519115 | None:intergenic |
| GGATTACATGGACCTTGTGC+AGG | 0.524100 | 3_1:+90516754 | Msa0386740:CDS |
| CTGATACTATGCCCGTCTAT+CGG | 0.526351 | 3_1:-90519235 | None:intergenic |
| CAGTTGTCAATCTTTGTTGG+TGG | 0.526500 | 3_1:-90517780 | None:intergenic |
| GCCATTACCAAAATAGGTGC+GGG | 0.529257 | 3_1:-90516132 | None:intergenic |
| TTTAGCTACCTCAAATATCC+AGG | 0.529473 | 3_1:-90516569 | None:intergenic |
| GCCTTCATTTATGAGACTAC+GGG | 0.529757 | 3_1:+90515666 | Msa0386740:CDS |
| GAAGCAGATAGACCAGAAGA+TGG | 0.530049 | 3_1:+90518761 | Msa0386740:CDS |
| GAGAAGGCAACAATAGAAGA+TGG | 0.536624 | 3_1:+90518818 | Msa0386740:CDS |
| GCGGGCGATATGCCGGTTGA+GGG | 0.537648 | 3_1:-90516114 | None:intergenic |
| GCCCGTAGTCTCATAAATGA+AGG | 0.540913 | 3_1:-90515667 | None:intergenic |
| TTTATACCGAATGGATTACA+TGG | 0.541016 | 3_1:+90516742 | Msa0386740:CDS |
| TTGTGTTCCCTTATAGCTGA+AGG | 0.541200 | 3_1:-90517436 | None:intergenic |
| AATCCAGGAGATGTGAAAAT+GGG | 0.542716 | 3_1:-90517753 | None:intergenic |
| TGTCAATCTTTGTTGGTGGT+AGG | 0.544891 | 3_1:-90517776 | None:intergenic |
| ATTGCTTCTCTTCTTGCAGA+GGG | 0.546628 | 3_1:+90518444 | Msa0386740:CDS |
| GGTGTCCTTTGCACTTGCAA+GGG | 0.547102 | 3_1:-90519120 | None:intergenic |
| ATGCTGTGAGACAATTTACC+TGG | 0.547645 | 3_1:+90516551 | Msa0386740:CDS |
| TTAGAGTGGTGATGAAGGAA+AGG | 0.548953 | 3_1:-90515116 | None:intergenic |
| GTTGCAGCTCGTTTGGTGAG+AGG | 0.549526 | 3_1:-90515748 | None:intergenic |
| TGAAAGCAAAATGATTAGAG+TGG | 0.555391 | 3_1:-90515130 | None:intergenic |
| ATTCTCTCAGGAAACATCCA+TGG | 0.560478 | 3_1:-90517931 | None:intergenic |
| CGAAAATGTATTGATCTTGG+CGG | 0.562354 | 3_1:+90516712 | Msa0386740:CDS |
| AGAGGATATAGATGTGTCCC+TGG | 0.562439 | 3_1:-90515730 | None:intergenic |
| GTGGATGCCATTATCTCCCA+TGG | 0.562721 | 3_1:+90517914 | Msa0386740:CDS |
| TTACAGGACACTGTAATGAT+GGG | 0.563295 | 3_1:+90518393 | Msa0386740:intron |
| ACGATTCAACACTCCATTGT+GGG | 0.563420 | 3_1:+90517956 | Msa0386740:CDS |
| AATGGCATCAACTTTGGTGA+TGG | 0.564301 | 3_1:+90516149 | Msa0386740:CDS |
| CAACAACAGTTCCTGGGTCA+CGG | 0.564955 | 3_1:+90515347 | Msa0386740:CDS |
| GATGGGTTCTACATCCGAGC+AGG | 0.567281 | 3_1:+90518779 | Msa0386740:CDS |
| AGTATCATAGACCGATAGAC+GGG | 0.569553 | 3_1:+90519224 | Msa0386740:three_prime_UTR |
| ACTCCCTCCCGCATCTTTGG+GGG | 0.569992 | 3_1:+90518920 | Msa0386740:three_prime_UTR |
| TAGACGGGCATAGTATCAGC+AGG | 0.575523 | 3_1:+90519239 | Msa0386740:three_prime_UTR |
| CTTTGGTGATGGATTTGTCG+AGG | 0.575589 | 3_1:+90516160 | Msa0386740:CDS |
| CAGGAGAAGCAGGAAATAAG+TGG | 0.578571 | 3_1:+90516512 | Msa0386740:CDS |
| TTACGACTGTGATTCCTGCT+CGG | 0.579118 | 3_1:-90518793 | None:intergenic |
| GTAATTTCCATTGTATTGGG+AGG | 0.579499 | 3_1:+90515703 | Msa0386740:CDS |
| AATTGCTTCTCTTCTTGCAG+AGG | 0.580389 | 3_1:+90518443 | Msa0386740:CDS |
| CGCCATATATTGCATCTATG+GGG | 0.580655 | 3_1:+90517329 | Msa0386740:CDS |
| AAATGTATTGATCTTGGCGG+GGG | 0.586103 | 3_1:+90516715 | Msa0386740:CDS |
| ATGGTAACTTCATAGCTCAC+AGG | 0.591489 | 3_1:-90519090 | None:intergenic |
| TACGATTCAACACTCCATTG+TGG | 0.592126 | 3_1:+90517955 | Msa0386740:CDS |
| AGGTCCCAATTGGAATTGGA+AGG | 0.593367 | 3_1:+90518469 | Msa0386740:CDS |
| CTACCTCTTTGGTAAGAGCA+AGG | 0.597638 | 3_1:-90517621 | None:intergenic |
| AATCACAGTCGTAATGGAGA+AGG | 0.598873 | 3_1:+90518802 | Msa0386740:CDS |
| ACGTGATCTTTCACCCACAA+TGG | 0.598941 | 3_1:-90517969 | None:intergenic |
| CTGGCGGCGACACAAACACC+AGG | 0.599567 | 3_1:+90516493 | Msa0386740:CDS |
| ACAATTTCGTGTGCTGCTGT+GGG | 0.600540 | 3_1:+90516889 | Msa0386740:CDS |
| CCTCTCCCTTGCAAGTGCAA+AGG | 0.601436 | 3_1:+90519115 | Msa0386740:three_prime_UTR |
| ATCAGATTACGGATTGGTCA+AGG | 0.601973 | 3_1:+90517070 | Msa0386740:CDS |
| GACCCAAAGTCATTAGATGT+AGG | 0.602968 | 3_1:-90517403 | None:intergenic |
| AAGCTTCAACAACAGTTCCT+GGG | 0.603713 | 3_1:+90515341 | Msa0386740:CDS |
| GGCGAGTTCAATGCATCTTG+TGG | 0.605926 | 3_1:-90517310 | None:intergenic |
| AAGTATCATAGACCGATAGA+CGG | 0.608777 | 3_1:+90519223 | Msa0386740:three_prime_UTR |
| AAGCAGATAGACCAGAAGAT+GGG | 0.608981 | 3_1:+90518762 | Msa0386740:CDS |
| CTTACTTCAGATGATCCCAA+AGG | 0.609533 | 3_1:+90515432 | Msa0386740:CDS |
| TGGTCCTCCTCCCAATACAA+TGG | 0.610133 | 3_1:-90515710 | None:intergenic |
| TGCCATTACCAAAATAGGTG+CGG | 0.611817 | 3_1:-90516133 | None:intergenic |
| TAACCTTGCTCTTACCAAAG+AGG | 0.620952 | 3_1:+90517618 | Msa0386740:CDS |
| TTCTCTCAGGAAACATCCAT+GGG | 0.621640 | 3_1:-90517930 | None:intergenic |
| ATTCAACTGATCCGTGACCC+AGG | 0.624435 | 3_1:-90515358 | None:intergenic |
| AAAATGTATTGATCTTGGCG+GGG | 0.624444 | 3_1:+90516714 | Msa0386740:CDS |
| CCGTGCATCAGATTACGGAT+TGG | 0.628119 | 3_1:+90517064 | Msa0386740:CDS |
| CCAATCCGTAATCTGATGCA+CGG | 0.631395 | 3_1:-90517064 | None:intergenic |
| GCCATATATTGCATCTATGG+GGG | 0.635669 | 3_1:+90517330 | Msa0386740:CDS |
| AGGGGCTGATCTGAAAGCAA+TGG | 0.635698 | 3_1:+90517136 | Msa0386740:CDS |
| GGTATGTTGAATAGAGAAAG+CGG | 0.636993 | 3_1:+90518966 | Msa0386740:three_prime_UTR |
| TTGGTCAAGGTAGACGAGAG+AGG | 0.645991 | 3_1:+90517083 | Msa0386740:CDS |
| TTCATGAGCTGGTTTCTCTG+CGG | 0.646676 | 3_1:+90518872 | Msa0386740:three_prime_UTR |
| AAATGGTAAATAGGTTCTGG+CGG | 0.656449 | 3_1:+90516477 | Msa0386740:intron |
| CATTTCTCGTGAAAAGAGAG+AGG | 0.666284 | 3_1:+90515064 | Msa0386740:five_prime_UTR |
| TGGCGACAACCCAAGACGAG+AGG | 0.678555 | 3_1:-90517290 | None:intergenic |
| TTGTATTGGGAGGAGGACCA+GGG | 0.698716 | 3_1:+90515713 | Msa0386740:CDS |
| CAAACGAGCTGCAACACCCG+CGG | 0.704400 | 3_1:+90515756 | Msa0386740:CDS |
| TTACAATGTATACCTGCACA+AGG | 0.713916 | 3_1:-90516766 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTCATTATTAATTTATTAT+AGG | + | chr3_1:90514965-90514984 | Msa0386740:five_prime_UTR | 10.0% |
| !!! | TTTTTTAGAATTTGAAAAAT+GGG | - | chr3_1:90515292-90515311 | None:intergenic | 10.0% |
| !!! | CTAATTATTTTTATATACTT+TGG | - | chr3_1:90515832-90515851 | None:intergenic | 10.0% |
| !! | TTATTAAAATTATATACTTG+AGG | + | chr3_1:90515889-90515908 | Msa0386740:intron | 10.0% |
| !! | TATTAAAATTATATACTTGA+GGG | + | chr3_1:90515890-90515909 | Msa0386740:intron | 10.0% |
| !! | TAATATAGTTATTGATAAAA+AGG | - | chr3_1:90516242-90516261 | None:intergenic | 10.0% |
| !! | ACAAAAGTAAAATAAATTAA+GGG | + | chr3_1:90519062-90519081 | Msa0386740:three_prime_UTR | 10.0% |
| !!! | CTTTTTTAGAATTTGAAAAA+TGG | - | chr3_1:90515293-90515312 | None:intergenic | 15.0% |
| !!! | CATTTTTCAAATTCTAAAAA+AGG | + | chr3_1:90515291-90515310 | Msa0386740:CDS | 15.0% |
| !! | AAATGGTTTAAATAACAAAA+AGG | - | chr3_1:90516602-90516621 | None:intergenic | 15.0% |
| !!! | AATAAAATTTCTGATTTTTG+AGG | + | chr3_1:90516638-90516657 | Msa0386740:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGAACCA+GGG | - | chr3_1:90518074-90518093 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAACC+AGG | - | chr3_1:90518075-90518094 | None:intergenic | 15.0% |
| !!! | TTTTATATTTAGTTAGTAGT+AGG | - | chr3_1:90518366-90518385 | None:intergenic | 15.0% |
| !!! | AATATAAAATCATCTTTTAC+AGG | + | chr3_1:90518377-90518396 | Msa0386740:intron | 15.0% |
| !! | CACAAAAGTAAAATAAATTA+AGG | + | chr3_1:90519061-90519080 | Msa0386740:three_prime_UTR | 15.0% |
| !!! | TTAATTTAATTTTTAACTGG+TGG | + | chr3_1:90519169-90519188 | Msa0386740:three_prime_UTR | 15.0% |
| !!! | TCTAAAAAAGGTTCTTTTTT+TGG | + | chr3_1:90515303-90515322 | Msa0386740:CDS | 20.0% |
| !! | CATAACATAATTGTAAAGTT+AGG | + | chr3_1:90515543-90515562 | Msa0386740:intron | 20.0% |
| !!! | ACAATGGAAATTACATTTTT+TGG | - | chr3_1:90515697-90515716 | None:intergenic | 20.0% |
| !! | AAATGTAATTTCCATTGTAT+TGG | + | chr3_1:90515699-90515718 | Msa0386740:CDS | 20.0% |
| !! | AATGTAATTTCCATTGTATT+GGG | + | chr3_1:90515700-90515719 | Msa0386740:CDS | 20.0% |
| !! | AATAGAAACAAACTTGAAAT+CGG | - | chr3_1:90516432-90516451 | None:intergenic | 20.0% |
| !! | CTAATTAAAGTGAATCTAAA+TGG | + | chr3_1:90516460-90516479 | Msa0386740:intron | 20.0% |
| !!! | ATTTTCGACATTTATATTCT+TGG | - | chr3_1:90516699-90516718 | None:intergenic | 20.0% |
| !! | TGCAATGCATATATATTTAT+TGG | - | chr3_1:90517481-90517500 | None:intergenic | 20.0% |
| !! | AAAAAAGCAGATATGTAAAA+CGG | + | chr3_1:90518093-90518112 | Msa0386740:intron | 20.0% |
| !!! | ATTCATTCTATTTTTACATG+TGG | - | chr3_1:90519017-90519036 | None:intergenic | 20.0% |
| !! | CAGTGATACAATAATTTAAA+AGG | - | chr3_1:90519144-90519163 | None:intergenic | 20.0% |
| !! | ATTTGTTTGTCTATGGTTTT+TGG | + | chr3_1:90514991-90515010 | Msa0386740:five_prime_UTR | 25.0% |
| !!! | AAGAAACTAAACTGTTTTTG+AGG | - | chr3_1:90515223-90515242 | None:intergenic | 25.0% |
| !!! | TTTTTTGGAGAAAGAATCAA+AGG | + | chr3_1:90515318-90515337 | Msa0386740:CDS | 25.0% |
| !! | TATGTGCCTACATTTTTATT+TGG | + | chr3_1:90515596-90515615 | Msa0386740:intron | 25.0% |
| !!! | ATGTGCCTACATTTTTATTT+GGG | + | chr3_1:90515597-90515616 | Msa0386740:intron | 25.0% |
| ! | CATATCCCAAATAAAAATGT+AGG | - | chr3_1:90515605-90515624 | None:intergenic | 25.0% |
| ! | AATAATTAGAGACTAAAGTG+TGG | + | chr3_1:90515843-90515862 | Msa0386740:intron | 25.0% |
| ! | AAGGTAATAGGAGAATAAAT+TGG | + | chr3_1:90515925-90515944 | Msa0386740:intron | 25.0% |
| !!! | TTACTGAAGTTTTGTTTCTT+TGG | - | chr3_1:90516312-90516331 | None:intergenic | 25.0% |
| ! | GAAACAAAACTTCAGTAATT+TGG | + | chr3_1:90516314-90516333 | Msa0386740:intron | 25.0% |
| ! | AGTGAATCTAAATGGTAAAT+AGG | + | chr3_1:90516468-90516487 | Msa0386740:intron | 25.0% |
| ! | TTATAGAAAATACGGAGAAA+TGG | - | chr3_1:90516619-90516638 | None:intergenic | 25.0% |
| !! | AGTATTCAATTCTTTGTTGT+AGG | + | chr3_1:90516670-90516689 | Msa0386740:intron | 25.0% |
| !!! | ATTGTAATTGTTTTGTAGAG+TGG | + | chr3_1:90516782-90516801 | Msa0386740:intron | 25.0% |
| !! | AATTTTCAGAAAAACCGAAA+GGG | + | chr3_1:90517117-90517136 | Msa0386740:CDS | 25.0% |
| !!! | TTTTACTCAAGCTTTTGAAA+TGG | + | chr3_1:90517374-90517393 | Msa0386740:CDS | 25.0% |
| ! | ATATATCTATCCATTTCAGA+AGG | + | chr3_1:90517506-90517525 | Msa0386740:intron | 25.0% |
| ! | GAATAATGAGTCTATGAATA+TGG | - | chr3_1:90518027-90518046 | None:intergenic | 25.0% |
| !! | ATTTTCTATCATTCAAGCTT+AGG | + | chr3_1:90518194-90518213 | Msa0386740:intron | 25.0% |
| ! | TACTTACAGTCCAATTTATA+AGG | + | chr3_1:90518227-90518246 | Msa0386740:intron | 25.0% |
| ! | TCAAGGTTAACCTTATAAAT+TGG | - | chr3_1:90518240-90518259 | None:intergenic | 25.0% |
| !! | GAGTAACACTTACTTAATTT+TGG | - | chr3_1:90518499-90518518 | None:intergenic | 25.0% |
| !! | AATTAAGTAAGTGTTACTCA+CGG | + | chr3_1:90518500-90518519 | Msa0386740:intron | 25.0% |
| !! | AATATCAGTTAGTAGTTTTC+TGG | + | chr3_1:90518680-90518699 | Msa0386740:intron | 25.0% |
| !! | ATAAACCATTCGAGTTTATA+AGG | - | chr3_1:90518726-90518745 | None:intergenic | 25.0% |
| ! | GTCATATAAATAATGGTTAG+TGG | + | chr3_1:90518845-90518864 | Msa0386740:exon | 25.0% |
| !!! | ATTCTATTTTTACATGTGGT+GGG | - | chr3_1:90519013-90519032 | None:intergenic | 25.0% |
| !! | TAGGAGTATTTGTTTGTCTA+TGG | + | chr3_1:90514984-90515003 | Msa0386740:five_prime_UTR | 30.0% |
| TGAAAGCAAAATGATTAGAG+TGG | - | chr3_1:90515133-90515152 | None:intergenic | 30.0% | |
| !!! | TAAACTGTTTTTGAGGTTGA+AGG | - | chr3_1:90515216-90515235 | None:intergenic | 30.0% |
| GAATTTGAAAAATGGGTGTT+GGG | - | chr3_1:90515285-90515304 | None:intergenic | 30.0% | |
| AGAATTTGAAAAATGGGTGT+TGG | - | chr3_1:90515286-90515305 | None:intergenic | 30.0% | |
| ! | TACTTTGGGAACTAAATTGA+TGG | - | chr3_1:90515817-90515836 | None:intergenic | 30.0% |
| ATATACTTGAGGGAATAAAC+TGG | + | chr3_1:90515900-90515919 | Msa0386740:intron | 30.0% | |
| AATAAACTGGAGAAGGTAAT+AGG | + | chr3_1:90515913-90515932 | Msa0386740:intron | 30.0% | |
| GTAATAGGAGAATAAATTGG+AGG | + | chr3_1:90515928-90515947 | Msa0386740:intron | 30.0% | |
| TTCAGACAACAATTATGAGT+AGG | - | chr3_1:90515959-90515978 | None:intergenic | 30.0% | |
| AAACATAGGGAACAAATGTT+AGG | - | chr3_1:90515983-90516002 | None:intergenic | 30.0% | |
| !!! | TGTTCCCTATGTTTGTTTTA+AGG | + | chr3_1:90515989-90516008 | Msa0386740:intron | 30.0% |
| GGAACCTTAAAACAAACATA+GGG | - | chr3_1:90515996-90516015 | None:intergenic | 30.0% | |
| AGGAACCTTAAAACAAACAT+AGG | - | chr3_1:90515997-90516016 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTAAGGTTCCTGTT+GGG | + | chr3_1:90516000-90516019 | Msa0386740:intron | 30.0% |
| CTATTTATACAGTTGCTCAT+TGG | - | chr3_1:90516050-90516069 | None:intergenic | 30.0% | |
| ATGAGCAACTGTATAAATAG+TGG | + | chr3_1:90516050-90516069 | Msa0386740:CDS | 30.0% | |
| ! | TTTCTTTGGAGGGATATTAT+TGG | - | chr3_1:90516298-90516317 | None:intergenic | 30.0% |
| !!! | TGAAGTTTTGTTTCTTTGGA+GGG | - | chr3_1:90516308-90516327 | None:intergenic | 30.0% |
| TGAATAAAGAAGCTCTTTCT+TGG | + | chr3_1:90516348-90516367 | Msa0386740:intron | 30.0% | |
| GAGAAAAAAATACAATCCAC+CGG | + | chr3_1:90516390-90516409 | Msa0386740:intron | 30.0% | |
| TCTAAATGGTAAATAGGTTC+TGG | + | chr3_1:90516474-90516493 | Msa0386740:intron | 30.0% | |
| ACAATTTACCTGGATATTTG+AGG | + | chr3_1:90516561-90516580 | Msa0386740:CDS | 30.0% | |
| ! | TGTCGAAAATGTATTGATCT+TGG | + | chr3_1:90516709-90516728 | Msa0386740:CDS | 30.0% |
| !! | TTTATACCGAATGGATTACA+TGG | + | chr3_1:90516742-90516761 | Msa0386740:CDS | 30.0% |
| AGCACACGAAATTGTAATAT+CGG | - | chr3_1:90516884-90516903 | None:intergenic | 30.0% | |
| AACAAGAAGAAACACATAAC+AGG | - | chr3_1:90516934-90516953 | None:intergenic | 30.0% | |
| !! | CTTTCGGTTTTTCTGAAAAT+TGG | - | chr3_1:90517118-90517137 | None:intergenic | 30.0% |
| ! | CAATTTTCAGAAAAACCGAA+AGG | + | chr3_1:90517116-90517135 | Msa0386740:CDS | 30.0% |
| ! | ATTTTCAGAAAAACCGAAAG+GGG | + | chr3_1:90517118-90517137 | Msa0386740:CDS | 30.0% |
| ATAACAAGAAAGCAGAAAGA+AGG | - | chr3_1:90517193-90517212 | None:intergenic | 30.0% | |
| TATCCTACATCTAATGACTT+TGG | + | chr3_1:90517400-90517419 | Msa0386740:CDS | 30.0% | |
| ATCCTACATCTAATGACTTT+GGG | + | chr3_1:90517401-90517420 | Msa0386740:CDS | 30.0% | |
| TATAGCTGAAGGAATGATTT+CGG | - | chr3_1:90517428-90517447 | None:intergenic | 30.0% | |
| AAATCATTCCTTCAGCTATA+AGG | + | chr3_1:90517428-90517447 | Msa0386740:CDS | 30.0% | |
| AATCATTCCTTCAGCTATAA+GGG | + | chr3_1:90517429-90517448 | Msa0386740:CDS | 30.0% | |
| TTATTGGAATTCCTCTTACT+TGG | - | chr3_1:90517465-90517484 | None:intergenic | 30.0% | |
| !!! | GAAAATTTGTGTTGTTTTGC+AGG | + | chr3_1:90517537-90517556 | Msa0386740:intron | 30.0% |
| !! | GTTTTGCAGGCATATTTTTT+CGG | + | chr3_1:90517550-90517569 | Msa0386740:intron | 30.0% |
| !!! | ATATTTTTTCGGAGACTACT+GGG | + | chr3_1:90517561-90517580 | Msa0386740:CDS | 30.0% |
| GGATCATAAAACTGAAACTT+CGG | - | chr3_1:90517726-90517745 | None:intergenic | 30.0% | |
| GATAGATAAATTGTCGTACT+CGG | - | chr3_1:90517806-90517825 | None:intergenic | 30.0% | |
| GAAAGATCACGTTTAGATTA+TGG | + | chr3_1:90517980-90517999 | Msa0386740:CDS | 30.0% | |
| GCTGTTCTAACATAGATATT+TGG | - | chr3_1:90518049-90518068 | None:intergenic | 30.0% | |
| GAACACACAATATTTGATCA+TGG | + | chr3_1:90518123-90518142 | Msa0386740:intron | 30.0% | |
| ACCATTTAATAGAGTGTGTT+GGG | - | chr3_1:90518343-90518362 | None:intergenic | 30.0% | |
| TATTCCTTCCAATTCCAATT+GGG | - | chr3_1:90518476-90518495 | None:intergenic | 30.0% | |
| !! | TTGCTTGTTATCTTTGTCAA+AGG | + | chr3_1:90518588-90518607 | Msa0386740:intron | 30.0% |
| ATTGACAAGAATGCAAAGAT+TGG | + | chr3_1:90518620-90518639 | Msa0386740:CDS | 30.0% | |
| TTGACAAGAATGCAAAGATT+GGG | + | chr3_1:90518621-90518640 | Msa0386740:CDS | 30.0% | |
| TGGAGCTGTCATATAAATAA+TGG | + | chr3_1:90518838-90518857 | Msa0386740:exon | 30.0% | |
| !!! | CATTCTATTTTTACATGTGG+TGG | - | chr3_1:90519014-90519033 | None:intergenic | 30.0% |
| ! | GAAATGTTGTGTTGGGATTT+TGG | - | chr3_1:90515050-90515069 | None:intergenic | 35.0% |
| TTCACGAGAAATGTTGTGTT+GGG | - | chr3_1:90515057-90515076 | None:intergenic | 35.0% | |
| TTTCACGAGAAATGTTGTGT+TGG | - | chr3_1:90515058-90515077 | None:intergenic | 35.0% | |
| TCTTGCTCATACTTCCATAA+AGG | + | chr3_1:90515087-90515106 | Msa0386740:five_prime_UTR | 35.0% | |
| ! | AATGATTAGAGTGGTGATGA+AGG | - | chr3_1:90515124-90515143 | None:intergenic | 35.0% |
| GTTTCTTGATATCACTGCAA+TGG | + | chr3_1:90515236-90515255 | Msa0386740:exon | 35.0% | |
| !! | AAAATGGGTGTTGGGTTTAA+CGG | - | chr3_1:90515277-90515296 | None:intergenic | 35.0% |
| GAATGAAATTGAGCTTACCA+AGG | - | chr3_1:90515460-90515479 | None:intergenic | 35.0% | |
| GGTAAGCTCAATTTCATTCT+AGG | + | chr3_1:90515461-90515480 | Msa0386740:intron | 35.0% | |
| TGCCTTCATTTATGAGACTA+CGG | + | chr3_1:90515665-90515684 | Msa0386740:CDS | 35.0% | |
| GTAATTTCCATTGTATTGGG+AGG | + | chr3_1:90515703-90515722 | Msa0386740:CDS | 35.0% | |
| !!! | GTTTGTTTTAAGGTTCCTGT+TGG | + | chr3_1:90515999-90516018 | Msa0386740:intron | 35.0% |
| !!! | TTGTTTTAAGGTTCCTGTTG+GGG | + | chr3_1:90516001-90516020 | Msa0386740:intron | 35.0% |
| GTTGATGCCATTACCAAAAT+AGG | - | chr3_1:90516141-90516160 | None:intergenic | 35.0% | |
| !! | TTTGGTAATGGCATCAACTT+TGG | + | chr3_1:90516143-90516162 | Msa0386740:CDS | 35.0% |
| ATTCACCATCAGTAGATGTA+TGG | + | chr3_1:90516198-90516217 | Msa0386740:intron | 35.0% | |
| ACTTTCCATACATCTACTGA+TGG | - | chr3_1:90516206-90516225 | None:intergenic | 35.0% | |
| !!! | CTGAAGTTTTGTTTCTTTGG+AGG | - | chr3_1:90516309-90516328 | None:intergenic | 35.0% |
| TAAAGAAGCTCTTTCTTGGT+TGG | + | chr3_1:90516352-90516371 | Msa0386740:intron | 35.0% | |
| ! | AAATGGTAAATAGGTTCTGG+CGG | + | chr3_1:90516477-90516496 | Msa0386740:intron | 35.0% |
| TTTAGCTACCTCAAATATCC+AGG | - | chr3_1:90516572-90516591 | None:intergenic | 35.0% | |
| ! | CGAAAATGTATTGATCTTGG+CGG | + | chr3_1:90516712-90516731 | Msa0386740:CDS | 35.0% |
| ! | GAAAATGTATTGATCTTGGC+GGG | + | chr3_1:90516713-90516732 | Msa0386740:CDS | 35.0% |
| ! | AAAATGTATTGATCTTGGCG+GGG | + | chr3_1:90516714-90516733 | Msa0386740:CDS | 35.0% |
| TTACAATGTATACCTGCACA+AGG | - | chr3_1:90516769-90516788 | None:intergenic | 35.0% | |
| ! | AGAAAGAAGGTGCAAACATT+GGG | - | chr3_1:90517180-90517199 | None:intergenic | 35.0% |
| ! | CTTTCTGCTTTCTTGTTATC+TGG | + | chr3_1:90517194-90517213 | Msa0386740:intron | 35.0% |
| ! | TTTCTGATAGTGAACAGTCT+CGG | - | chr3_1:90517228-90517247 | None:intergenic | 35.0% |
| ! | GAGGATGGTCAATTCATTTT+TGG | - | chr3_1:90517251-90517270 | None:intergenic | 35.0% |
| ! | TATCTACTTGCTGCAAAATG+AGG | - | chr3_1:90517270-90517289 | None:intergenic | 35.0% |
| TCGCCATATATTGCATCTAT+GGG | + | chr3_1:90517328-90517347 | Msa0386740:CDS | 35.0% | |
| !!! | CATATTTTTTCGGAGACTAC+TGG | + | chr3_1:90517560-90517579 | Msa0386740:CDS | 35.0% |
| AATCCAGGAGATGTGAAAAT+GGG | - | chr3_1:90517756-90517775 | None:intergenic | 35.0% | |
| !!! | GTCATGTGTTGCTTTGTTTT+TGG | + | chr3_1:90517882-90517901 | Msa0386740:intron | 35.0% |
| !!! | ATGTGTTGCTTTGTTTTTGG+TGG | + | chr3_1:90517885-90517904 | Msa0386740:intron | 35.0% |
| ACAAGTCACCATCTATTTGT+CGG | - | chr3_1:90518295-90518314 | None:intergenic | 35.0% | |
| ACCCAACACACTCTATTAAA+TGG | + | chr3_1:90518339-90518358 | Msa0386740:intron | 35.0% | |
| GACCATTTAATAGAGTGTGT+TGG | - | chr3_1:90518344-90518363 | None:intergenic | 35.0% | |
| TTTACAGGACACTGTAATGA+TGG | + | chr3_1:90518392-90518411 | Msa0386740:intron | 35.0% | |
| TTACAGGACACTGTAATGAT+GGG | + | chr3_1:90518393-90518412 | Msa0386740:intron | 35.0% | |
| AAGAGAAGCAATTTCGGATT+CGG | - | chr3_1:90518436-90518455 | None:intergenic | 35.0% | |
| TGCAAGAAGAGAAGCAATTT+CGG | - | chr3_1:90518442-90518461 | None:intergenic | 35.0% | |
| GTATTCCTTCCAATTCCAAT+TGG | - | chr3_1:90518477-90518496 | None:intergenic | 35.0% | |
| !! | AAGGATGCACAAAAGTATTG+CGG | - | chr3_1:90518707-90518726 | None:intergenic | 35.0% |
| TGCATCCTTATAAACTCGAA+TGG | + | chr3_1:90518718-90518737 | Msa0386740:intron | 35.0% | |
| AACTCGAATGGTTTATCTGT+AGG | + | chr3_1:90518730-90518749 | Msa0386740:intron | 35.0% | |
| ACTCGAATGGTTTATCTGTA+GGG | + | chr3_1:90518731-90518750 | Msa0386740:intron | 35.0% | |
| GGTATGTTGAATAGAGAAAG+CGG | + | chr3_1:90518966-90518985 | Msa0386740:three_prime_UTR | 35.0% | |
| !! | TTTTAACTGGTGGTGTGATA+AGG | + | chr3_1:90519179-90519198 | Msa0386740:three_prime_UTR | 35.0% |
| AAGTATCATAGACCGATAGA+CGG | + | chr3_1:90519223-90519242 | Msa0386740:three_prime_UTR | 35.0% | |
| CATTTCTCGTGAAAAGAGAG+AGG | + | chr3_1:90515064-90515083 | Msa0386740:five_prime_UTR | 40.0% | |
| AGGAAAGGAAGTTGCCTTTA+TGG | - | chr3_1:90515104-90515123 | None:intergenic | 40.0% | |
| ! | TTAGAGTGGTGATGAAGGAA+AGG | - | chr3_1:90515119-90515138 | None:intergenic | 40.0% |
| AAGCTTCAACAACAGTTCCT+GGG | + | chr3_1:90515341-90515360 | Msa0386740:CDS | 40.0% | |
| AGCATGTTTGATCTTCGTCT+GGG | - | chr3_1:90515397-90515416 | None:intergenic | 40.0% | |
| CTTACTTCAGATGATCCCAA+AGG | + | chr3_1:90515432-90515451 | Msa0386740:CDS | 40.0% | |
| GCCTTCATTTATGAGACTAC+GGG | + | chr3_1:90515666-90515685 | Msa0386740:CDS | 40.0% | |
| ATTTCCATTGTATTGGGAGG+AGG | + | chr3_1:90515706-90515725 | Msa0386740:CDS | 40.0% | |
| ATCATGATAGTCACTTACCG+CGG | - | chr3_1:90515776-90515795 | None:intergenic | 40.0% | |
| TTGAGGGAATAAACTGGAGA+AGG | + | chr3_1:90515906-90515925 | Msa0386740:intron | 40.0% | |
| !!! | TGTTTTAAGGTTCCTGTTGG+GGG | + | chr3_1:90516002-90516021 | Msa0386740:intron | 40.0% |
| TGCCATTACCAAAATAGGTG+CGG | - | chr3_1:90516136-90516155 | None:intergenic | 40.0% | |
| AATGGCATCAACTTTGGTGA+TGG | + | chr3_1:90516149-90516168 | Msa0386740:CDS | 40.0% | |
| ! | CTACTGATGGTGAATTGTGA+TGG | - | chr3_1:90516193-90516212 | None:intergenic | 40.0% |
| GCAGGAAATAAGTGGTTTCA+AGG | + | chr3_1:90516520-90516539 | Msa0386740:CDS | 40.0% | |
| ATGCTGTGAGACAATTTACC+TGG | + | chr3_1:90516551-90516570 | Msa0386740:CDS | 40.0% | |
| ! | AAATGTATTGATCTTGGCGG+GGG | + | chr3_1:90516715-90516734 | Msa0386740:CDS | 40.0% |
| CAAGGTCCATGTAATCCATT+CGG | - | chr3_1:90516751-90516770 | None:intergenic | 40.0% | |
| !! | ATCAGATTACGGATTGGTCA+AGG | + | chr3_1:90517070-90517089 | Msa0386740:CDS | 40.0% |
| ! | CAGAAAGAAGGTGCAAACAT+TGG | - | chr3_1:90517181-90517200 | None:intergenic | 40.0% |
| ! | TACTTGCTGCAAAATGAGGA+TGG | - | chr3_1:90517266-90517285 | None:intergenic | 40.0% |
| AAGTAGATACCTCTCGTCTT+GGG | + | chr3_1:90517281-90517300 | Msa0386740:CDS | 40.0% | |
| CTCGCCATATATTGCATCTA+TGG | + | chr3_1:90517327-90517346 | Msa0386740:CDS | 40.0% | |
| CGCCATATATTGCATCTATG+GGG | + | chr3_1:90517329-90517348 | Msa0386740:CDS | 40.0% | |
| GCCATATATTGCATCTATGG+GGG | + | chr3_1:90517330-90517349 | Msa0386740:CDS | 40.0% | |
| ACCCCCATAGATGCAATATA+TGG | - | chr3_1:90517334-90517353 | None:intergenic | 40.0% | |
| GACCCAAAGTCATTAGATGT+AGG | - | chr3_1:90517406-90517425 | None:intergenic | 40.0% | |
| TTGTGTTCCCTTATAGCTGA+AGG | - | chr3_1:90517439-90517458 | None:intergenic | 40.0% | |
| GAACACAATGTCCAAGTAAG+AGG | + | chr3_1:90517451-90517470 | Msa0386740:intron | 40.0% | |
| ! | TCTCATTGCTCCTTCTGAAA+TGG | - | chr3_1:90517519-90517538 | None:intergenic | 40.0% |
| AGCAAGGTTAGCATCGTAAA+AGG | - | chr3_1:90517608-90517627 | None:intergenic | 40.0% | |
| TAACCTTGCTCTTACCAAAG+AGG | + | chr3_1:90517618-90517637 | Msa0386740:CDS | 40.0% | |
| ATTTCTTGCACCTACCTCTT+TGG | - | chr3_1:90517635-90517654 | None:intergenic | 40.0% | |
| AGGTAGGTGCAAGAAATTGT+CGG | + | chr3_1:90517638-90517657 | Msa0386740:intron | 40.0% | |
| TCTGCATGAGAGTAGCATAA+AGG | - | chr3_1:90517701-90517720 | None:intergenic | 40.0% | |
| GATGTGAAAATGGGTGTCTT+GGG | - | chr3_1:90517747-90517766 | None:intergenic | 40.0% | |
| AGATGTGAAAATGGGTGTCT+TGG | - | chr3_1:90517748-90517767 | None:intergenic | 40.0% | |
| GAATCCAGGAGATGTGAAAA+TGG | - | chr3_1:90517757-90517776 | None:intergenic | 40.0% | |
| !! | TGTCAATCTTTGTTGGTGGT+AGG | - | chr3_1:90517779-90517798 | None:intergenic | 40.0% |
| CAGTTGTCAATCTTTGTTGG+TGG | - | chr3_1:90517783-90517802 | None:intergenic | 40.0% | |
| !!! | GTTGCTTTGTTTTTGGTGGT+AGG | + | chr3_1:90517889-90517908 | Msa0386740:intron | 40.0% |
| !!! | TTGTTTTTGGTGGTAGGTTG+TGG | + | chr3_1:90517895-90517914 | Msa0386740:intron | 40.0% |
| GAAACATCCATGGGAGATAA+TGG | - | chr3_1:90517924-90517943 | None:intergenic | 40.0% | |
| TTCTCTCAGGAAACATCCAT+GGG | - | chr3_1:90517933-90517952 | None:intergenic | 40.0% | |
| ATTCTCTCAGGAAACATCCA+TGG | - | chr3_1:90517934-90517953 | None:intergenic | 40.0% | |
| GTTGAATCGTACATTCTCTC+AGG | - | chr3_1:90517946-90517965 | None:intergenic | 40.0% | |
| TACGATTCAACACTCCATTG+TGG | + | chr3_1:90517955-90517974 | Msa0386740:CDS | 40.0% | |
| ACGATTCAACACTCCATTGT+GGG | + | chr3_1:90517956-90517975 | Msa0386740:CDS | 40.0% | |
| ATCAGAGACGTAGGAACAAT+TGG | - | chr3_1:90518156-90518175 | None:intergenic | 40.0% | |
| !! | CACTCTAAAATCAGAGACGT+AGG | - | chr3_1:90518165-90518184 | None:intergenic | 40.0% |
| !! | CTACGTCTCTGATTTTAGAG+TGG | + | chr3_1:90518163-90518182 | Msa0386740:intron | 40.0% |
| ! | AAGCAATTTCGGATTCGGTT+TGG | - | chr3_1:90518431-90518450 | None:intergenic | 40.0% |
| AATTGCTTCTCTTCTTGCAG+AGG | + | chr3_1:90518443-90518462 | Msa0386740:CDS | 40.0% | |
| ATTGCTTCTCTTCTTGCAGA+GGG | + | chr3_1:90518444-90518463 | Msa0386740:CDS | 40.0% | |
| AAGCAGATAGACCAGAAGAT+GGG | + | chr3_1:90518762-90518781 | Msa0386740:CDS | 40.0% | |
| ! | AATCACAGTCGTAATGGAGA+AGG | + | chr3_1:90518802-90518821 | Msa0386740:CDS | 40.0% |
| GAGAAGGCAACAATAGAAGA+TGG | + | chr3_1:90518818-90518837 | Msa0386740:CDS | 40.0% | |
| ! | TTAGTGGCTATTTCATGAGC+TGG | + | chr3_1:90518861-90518880 | Msa0386740:three_prime_UTR | 40.0% |
| GTATGGTGACTGTTGCAAAA+TGG | + | chr3_1:90518945-90518964 | Msa0386740:three_prime_UTR | 40.0% | |
| GAAAGCGGCATGTGTAAAAT+AGG | + | chr3_1:90518981-90519000 | Msa0386740:three_prime_UTR | 40.0% | |
| ATGGTAACTTCATAGCTCAC+AGG | - | chr3_1:90519093-90519112 | None:intergenic | 40.0% | |
| TCTATGATACTTGGAGCAAC+AGG | - | chr3_1:90519215-90519234 | None:intergenic | 40.0% | |
| GTCTATCGGTCTATGATACT+TGG | - | chr3_1:90519224-90519243 | None:intergenic | 40.0% | |
| AGTATCATAGACCGATAGAC+GGG | + | chr3_1:90519224-90519243 | Msa0386740:three_prime_UTR | 40.0% | |
| GATATCACTGCAATGGCTTC+TGG | + | chr3_1:90515243-90515262 | Msa0386740:exon | 45.0% | |
| GAAGCTTCAACAACAGTTCC+TGG | + | chr3_1:90515340-90515359 | Msa0386740:CDS | 45.0% | |
| CAGCATGTTTGATCTTCGTC+TGG | - | chr3_1:90515398-90515417 | None:intergenic | 45.0% | |
| AGATGATCCCAAAGGTTCCT+TGG | + | chr3_1:90515440-90515459 | Msa0386740:CDS | 45.0% | |
| GAGCTTACCAAGGAACCTTT+GGG | - | chr3_1:90515450-90515469 | None:intergenic | 45.0% | |
| TGAGCTTACCAAGGAACCTT+TGG | - | chr3_1:90515451-90515470 | None:intergenic | 45.0% | |
| GCCCGTAGTCTCATAAATGA+AGG | - | chr3_1:90515670-90515689 | None:intergenic | 45.0% | |
| AGAGGATATAGATGTGTCCC+TGG | - | chr3_1:90515733-90515752 | None:intergenic | 45.0% | |
| TCATGATAGTCACTTACCGC+GGG | - | chr3_1:90515775-90515794 | None:intergenic | 45.0% | |
| TCAATTCTGCTTCCCTCAAC+CGG | + | chr3_1:90516102-90516121 | Msa0386740:CDS | 45.0% | |
| GCCATTACCAAAATAGGTGC+GGG | - | chr3_1:90516135-90516154 | None:intergenic | 45.0% | |
| !! | CTTTGGTGATGGATTTGTCG+AGG | + | chr3_1:90516160-90516179 | Msa0386740:CDS | 45.0% |
| TCAACAAGAATCTCTTCCGG+TGG | - | chr3_1:90516409-90516428 | None:intergenic | 45.0% | |
| CGGTCAACAAGAATCTCTTC+CGG | - | chr3_1:90516412-90516431 | None:intergenic | 45.0% | |
| CACTTATTTCCTGCTTCTCC+TGG | - | chr3_1:90516514-90516533 | None:intergenic | 45.0% | |
| CAGGAGAAGCAGGAAATAAG+TGG | + | chr3_1:90516512-90516531 | Msa0386740:CDS | 45.0% | |
| GGGGGATCATTTATACCGAA+TGG | + | chr3_1:90516733-90516752 | Msa0386740:CDS | 45.0% | |
| ! | TACAATTTCGTGTGCTGCTG+TGG | + | chr3_1:90516888-90516907 | Msa0386740:CDS | 45.0% |
| ! | ACAATTTCGTGTGCTGCTGT+GGG | + | chr3_1:90516889-90516908 | Msa0386740:CDS | 45.0% |
| TTCAGCCGTGCATCAGATTA+CGG | + | chr3_1:90517059-90517078 | Msa0386740:intron | 45.0% | |
| CCAATCCGTAATCTGATGCA+CGG | - | chr3_1:90517067-90517086 | None:intergenic | 45.0% | |
| CAAGTAGATACCTCTCGTCT+TGG | + | chr3_1:90517280-90517299 | Msa0386740:CDS | 45.0% | |
| GGAGACTACTGGGAAGATAT+TGG | + | chr3_1:90517571-90517590 | Msa0386740:CDS | 45.0% | |
| CTACCTCTTTGGTAAGAGCA+AGG | - | chr3_1:90517624-90517643 | None:intergenic | 45.0% | |
| CTTGCTCTTACCAAAGAGGT+AGG | + | chr3_1:90517622-90517641 | Msa0386740:intron | 45.0% | |
| ! | ACACCCATTTTCACATCTCC+TGG | + | chr3_1:90517750-90517769 | Msa0386740:CDS | 45.0% |
| !! | TTTGTTGGTGGTAGGAATCC+AGG | - | chr3_1:90517771-90517790 | None:intergenic | 45.0% |
| CGGCAGTTGTCAATCTTTGT+TGG | - | chr3_1:90517786-90517805 | None:intergenic | 45.0% | |
| ACGTGATCTTTCACCCACAA+TGG | - | chr3_1:90517972-90517991 | None:intergenic | 45.0% | |
| ! | AGATTATGGCGTTGAGCTTC+AGG | + | chr3_1:90517994-90518013 | Msa0386740:CDS | 45.0% |
| CTATGTTAGAACAGCAACCC+TGG | + | chr3_1:90518054-90518073 | Msa0386740:intron | 45.0% | |
| TTCTCTTCTTGCAGAGGGAA+AGG | + | chr3_1:90518449-90518468 | Msa0386740:CDS | 45.0% | |
| GGAAAGGTCCCAATTGGAAT+TGG | + | chr3_1:90518465-90518484 | Msa0386740:CDS | 45.0% | |
| AGGTCCCAATTGGAATTGGA+AGG | + | chr3_1:90518469-90518488 | Msa0386740:CDS | 45.0% | |
| GAAGCAGATAGACCAGAAGA+TGG | + | chr3_1:90518761-90518780 | Msa0386740:CDS | 45.0% | |
| TTACGACTGTGATTCCTGCT+CGG | - | chr3_1:90518796-90518815 | None:intergenic | 45.0% | |
| AGCAGGAATCACAGTCGTAA+TGG | + | chr3_1:90518796-90518815 | Msa0386740:CDS | 45.0% | |
| ! | TTCATGAGCTGGTTTCTCTG+CGG | + | chr3_1:90518872-90518891 | Msa0386740:three_prime_UTR | 45.0% |
| CTGATACTATGCCCGTCTAT+CGG | - | chr3_1:90519238-90519257 | None:intergenic | 45.0% | |
| !!! | TAATTATTTTTATATACTTT+GGG | - | chr3_1:90515831-90515850 | None:intergenic | 5.0% |
| !!! | AATTTTATTTATAGAAAATA+CGG | - | chr3_1:90516627-90516646 | None:intergenic | 5.0% |
| !!! | TTATTAATTTAATTTTTAAC+TGG | + | chr3_1:90519166-90519185 | Msa0386740:three_prime_UTR | 5.0% |
| CAACAACAGTTCCTGGGTCA+CGG | + | chr3_1:90515347-90515366 | Msa0386740:CDS | 50.0% | |
| ATTCAACTGATCCGTGACCC+AGG | - | chr3_1:90515361-90515380 | None:intergenic | 50.0% | |
| TGGTCCTCCTCCCAATACAA+TGG | - | chr3_1:90515713-90515732 | None:intergenic | 50.0% | |
| ATTGTATTGGGAGGAGGACC+AGG | + | chr3_1:90515712-90515731 | Msa0386740:CDS | 50.0% | |
| TTGTATTGGGAGGAGGACCA+GGG | + | chr3_1:90515713-90515732 | Msa0386740:CDS | 50.0% | |
| TTCCTGTTGGGGGATGCTAT+AGG | + | chr3_1:90516012-90516031 | Msa0386740:CDS | 50.0% | |
| ! | CATATCGCCCGCACCTATTT+TGG | + | chr3_1:90516125-90516144 | Msa0386740:CDS | 50.0% |
| !!! | GCCCGCACCTATTTTGGTAA+TGG | + | chr3_1:90516131-90516150 | Msa0386740:CDS | 50.0% |
| ACACAAACACCAGGAGAAGC+AGG | + | chr3_1:90516502-90516521 | Msa0386740:CDS | 50.0% | |
| GGATTACATGGACCTTGTGC+AGG | + | chr3_1:90516754-90516773 | Msa0386740:CDS | 50.0% | |
| CCGTGCATCAGATTACGGAT+TGG | + | chr3_1:90517064-90517083 | Msa0386740:CDS | 50.0% | |
| TTGGTCAAGGTAGACGAGAG+AGG | + | chr3_1:90517083-90517102 | Msa0386740:CDS | 50.0% | |
| GCTTTCAGATCAGCCCCTTT+CGG | - | chr3_1:90517134-90517153 | None:intergenic | 50.0% | |
| AGGGGCTGATCTGAAAGCAA+TGG | + | chr3_1:90517136-90517155 | Msa0386740:CDS | 50.0% | |
| GGCGAGTTCAATGCATCTTG+TGG | - | chr3_1:90517313-90517332 | None:intergenic | 50.0% | |
| GTGGATGCCATTATCTCCCA+TGG | + | chr3_1:90517914-90517933 | Msa0386740:CDS | 50.0% | |
| TTAACCTTGAGCTGTACCGC+AGG | + | chr3_1:90518250-90518269 | Msa0386740:intron | 50.0% | |
| ACCATCTATTTGTCGGCCTG+CGG | - | chr3_1:90518288-90518307 | None:intergenic | 50.0% | |
| CGGATGTAGAACCCATCTTC+TGG | - | chr3_1:90518776-90518795 | None:intergenic | 50.0% | |
| CACTTGCAAGGGAGAGGATA+TGG | - | chr3_1:90519112-90519131 | None:intergenic | 50.0% | |
| GGTGTCCTTTGCACTTGCAA+GGG | - | chr3_1:90519123-90519142 | None:intergenic | 50.0% | |
| AGGTGTCCTTTGCACTTGCA+AGG | - | chr3_1:90519124-90519143 | None:intergenic | 50.0% | |
| TAGACGGGCATAGTATCAGC+AGG | + | chr3_1:90519239-90519258 | Msa0386740:three_prime_UTR | 50.0% | |
| ! | GTTGCAGCTCGTTTGGTGAG+AGG | - | chr3_1:90515751-90515770 | None:intergenic | 55.0% |
| AGCCTATAGCATCCCCCAAC+AGG | - | chr3_1:90516017-90516036 | None:intergenic | 55.0% | |
| AATAGGTGCGGGCGATATGC+CGG | - | chr3_1:90516124-90516143 | None:intergenic | 55.0% | |
| CTGATGCACGGCTGAAAAGC+AGG | - | chr3_1:90517055-90517074 | None:intergenic | 55.0% | |
| ATCTATTTGTCGGCCTGCGG+GGG | - | chr3_1:90518285-90518304 | None:intergenic | 55.0% | |
| CATCTATTTGTCGGCCTGCG+GGG | - | chr3_1:90518286-90518305 | None:intergenic | 55.0% | |
| CCATCTATTTGTCGGCCTGC+GGG | - | chr3_1:90518287-90518306 | None:intergenic | 55.0% | |
| GCAGAGGGAAAGGTCCCAAT+TGG | + | chr3_1:90518459-90518478 | Msa0386740:CDS | 55.0% | |
| ! | GATGGGTTCTACATCCGAGC+AGG | + | chr3_1:90518779-90518798 | Msa0386740:CDS | 55.0% |
| AACACTCCCTCCCGCATCTT+TGG | + | chr3_1:90518917-90518936 | Msa0386740:three_prime_UTR | 55.0% | |
| ACACTCCCTCCCGCATCTTT+GGG | + | chr3_1:90518918-90518937 | Msa0386740:three_prime_UTR | 55.0% | |
| CATACCTCCCCCAAAGATGC+GGG | - | chr3_1:90518930-90518949 | None:intergenic | 55.0% | |
| CCATACCTCCCCCAAAGATG+CGG | - | chr3_1:90518931-90518950 | None:intergenic | 55.0% | |
| CCTTTGCACTTGCAAGGGAG+AGG | - | chr3_1:90519118-90519137 | None:intergenic | 55.0% | |
| CCTCTCCCTTGCAAGTGCAA+AGG | + | chr3_1:90519115-90519134 | Msa0386740:three_prime_UTR | 55.0% | |
| CAAACGAGCTGCAACACCCG+CGG | + | chr3_1:90515756-90515775 | Msa0386740:CDS | 60.0% | |
| TGGCGACAACCCAAGACGAG+AGG | - | chr3_1:90517293-90517312 | None:intergenic | 60.0% | |
| ACCTTGAGCTGTACCGCAGG+AGG | + | chr3_1:90518253-90518272 | Msa0386740:intron | 60.0% | |
| CCTTGAGCTGTACCGCAGGA+GGG | + | chr3_1:90518254-90518273 | Msa0386740:intron | 60.0% | |
| CCCGCAGGCCGACAAATAGA+TGG | + | chr3_1:90518284-90518303 | Msa0386740:intron | 60.0% | |
| ! | AGCTGGTTTCTCTGCGGCGT+CGG | + | chr3_1:90518878-90518897 | Msa0386740:three_prime_UTR | 60.0% |
| CACTCCCTCCCGCATCTTTG+GGG | + | chr3_1:90518919-90518938 | Msa0386740:three_prime_UTR | 60.0% | |
| ACTCCCTCCCGCATCTTTGG+GGG | + | chr3_1:90518920-90518939 | Msa0386740:three_prime_UTR | 60.0% | |
| ! | CCGCATCTTTGGGGGAGGTA+TGG | + | chr3_1:90518928-90518947 | Msa0386740:three_prime_UTR | 60.0% |
| ! | CGCGGGTGTTGCAGCTCGTT+TGG | - | chr3_1:90515758-90515777 | None:intergenic | 65.0% |
| ! | GCGGGCGATATGCCGGTTGA+GGG | - | chr3_1:90516117-90516136 | None:intergenic | 65.0% |
| ! | TGCGGGCGATATGCCGGTTG+AGG | - | chr3_1:90516118-90516137 | None:intergenic | 65.0% |
| CTGGCGGCGACACAAACACC+AGG | + | chr3_1:90516493-90516512 | Msa0386740:CDS | 65.0% | |
| ! | CGTGTGCTGCTGTGGGTGAC+AGG | + | chr3_1:90516896-90516915 | Msa0386740:CDS | 65.0% |
| CCCTCCTGCGGTACAGCTCA+AGG | - | chr3_1:90518257-90518276 | None:intergenic | 65.0% | |
| ! | TGGTTTCTCTGCGGCGTCGG+AGG | + | chr3_1:90518881-90518900 | Msa0386740:three_prime_UTR | 65.0% |
| CCTCCCCCAAAGATGCGGGA+GGG | - | chr3_1:90518926-90518945 | None:intergenic | 65.0% | |
| ACCTCCCCCAAAGATGCGGG+AGG | - | chr3_1:90518927-90518946 | None:intergenic | 65.0% | |
| ! | CCCTCCCGCATCTTTGGGGG+AGG | + | chr3_1:90518923-90518942 | Msa0386740:three_prime_UTR | 70.0% |
| ! | GCGGGGGACGAGCCCTCCTG+CGG | - | chr3_1:90518269-90518288 | None:intergenic | 80.0% |
| ! | CAGGAGGGCTCGTCCCCCGC+AGG | + | chr3_1:90518269-90518288 | Msa0386740:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 90514955 | 90519285 | 90514955 | ID=Msa0386740;Name=Msa0386740 |
| chr3_1 | mRNA | 90514955 | 90519285 | 90514955 | ID=Msa0386740-mRNA-1;Parent=Msa0386740;Name=Msa0386740-mRNA-1;_AED=0.10;_eAED=0.10;_QI=300|0.92|0.92|1|1|1|14|432|535 |
| chr3_1 | exon | 90514955 | 90515461 | 90514955 | ID=Msa0386740-mRNA-1:exon:25027;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90515655 | 90515777 | 90515655 | ID=Msa0386740-mRNA-1:exon:25028;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90516011 | 90516181 | 90516011 | ID=Msa0386740-mRNA-1:exon:25029;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90516490 | 90516582 | 90516490 | ID=Msa0386740-mRNA-1:exon:25030;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90516692 | 90516775 | 90516692 | ID=Msa0386740-mRNA-1:exon:25031;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90516862 | 90516968 | 90516862 | ID=Msa0386740-mRNA-1:exon:25032;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90517064 | 90517157 | 90517064 | ID=Msa0386740-mRNA-1:exon:25033;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90517280 | 90517465 | 90517280 | ID=Msa0386740-mRNA-1:exon:25034;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90517559 | 90517639 | 90517559 | ID=Msa0386740-mRNA-1:exon:25035;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90517720 | 90517806 | 90517720 | ID=Msa0386740-mRNA-1:exon:25036;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90517911 | 90518015 | 90517911 | ID=Msa0386740-mRNA-1:exon:25037;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90518399 | 90518505 | 90518399 | ID=Msa0386740-mRNA-1:exon:25038;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90518610 | 90518670 | 90518610 | ID=Msa0386740-mRNA-1:exon:25039;Parent=Msa0386740-mRNA-1 |
| chr3_1 | exon | 90518752 | 90519285 | 90518752 | ID=Msa0386740-mRNA-1:exon:25040;Parent=Msa0386740-mRNA-1 |
| chr3_1 | five_prime_UTR | 90514955 | 90515254 | 90514955 | ID=Msa0386740-mRNA-1:five_prime_utr;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90515255 | 90515461 | 90515255 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90515655 | 90515777 | 90515655 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90516011 | 90516181 | 90516011 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90516490 | 90516582 | 90516490 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90516692 | 90516775 | 90516692 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90516862 | 90516968 | 90516862 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90517064 | 90517157 | 90517064 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90517280 | 90517465 | 90517280 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90517559 | 90517639 | 90517559 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90517720 | 90517806 | 90517720 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90517911 | 90518015 | 90517911 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90518399 | 90518505 | 90518399 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90518610 | 90518670 | 90518610 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | CDS | 90518752 | 90518853 | 90518752 | ID=Msa0386740-mRNA-1:cds;Parent=Msa0386740-mRNA-1 |
| chr3_1 | three_prime_UTR | 90518854 | 90519285 | 90518854 | ID=Msa0386740-mRNA-1:three_prime_utr;Parent=Msa0386740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
