Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274230 | KAG6784528.1 | 84.127 | 378 | 47 | 5 | 1 | 378 | 1 | 365 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274230 | sp|Q9LT08|PSDE_ARATH | 70.370 | 378 | 42 | 5 | 1 | 378 | 1 | 308 | 1.07e-180 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274230 | A0A5N5KAY2 | 80.203 | 394 | 37 | 5 | 1 | 378 | 1 | 369 | 0.0 | 616 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0274230 | Msa0314420 | 0.924797 | 4.357971e-90 | -8.615850e-47 |
| Msa0274230 | Msa0658590 | 0.800380 | 1.480875e-48 | -8.615850e-47 |
| Msa0274230 | Msa0839450 | 0.800720 | 1.262562e-48 | -8.615850e-47 |
| Msa0274230 | Msa1087350 | 0.876519 | 1.309154e-68 | -8.615850e-47 |
| Msa0274230 | Msa1226470 | 0.800177 | 1.628502e-48 | -8.615850e-47 |
| Msa0274230 | Msa1258780 | 0.801919 | 7.174156e-49 | -8.615850e-47 |
| Msa0274230 | Msa1330270 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa0274230 | Msa1369890 | 0.802506 | 5.432423e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274230 | MtrunA17_Chr2g0284651 | 100.000 | 178 | 0 | 0 | 201 | 378 | 132 | 309 | 4.78e-126 | 365 |
| Msa0274230 | MtrunA17_Chr2g0284651 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.02e-94 | 284 |
| Msa0274230 | MtrunA17_Chr1g0153761 | 98.876 | 178 | 2 | 0 | 201 | 378 | 136 | 313 | 6.97e-125 | 362 |
| Msa0274230 | MtrunA17_Chr1g0153761 | 96.350 | 137 | 4 | 1 | 1 | 136 | 4 | 140 | 2.58e-92 | 279 |
| Msa0274230 | MtrunA17_Chr8g0334331 | 52.381 | 105 | 45 | 3 | 29 | 130 | 58 | 160 | 7.01e-26 | 107 |
| Msa0274230 | MtrunA17_Chr3g0138921 | 52.381 | 105 | 45 | 3 | 29 | 130 | 92 | 194 | 1.36e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274230 | AT5G23540.1 | 70.370 | 378 | 42 | 5 | 1 | 378 | 1 | 308 | 0.0 | 506 |
| Msa0274230 | AT5G23540.2 | 67.683 | 328 | 37 | 4 | 51 | 378 | 1 | 259 | 9.94e-148 | 418 |
| Msa0274230 | AT1G71230.1 | 50.450 | 111 | 42 | 3 | 29 | 132 | 57 | 161 | 3.98e-26 | 108 |
| Msa0274230 | AT1G22920.1 | 49.038 | 104 | 50 | 2 | 29 | 130 | 57 | 159 | 1.48e-24 | 103 |
| Msa0274230 | AT1G22920.2 | 49.038 | 104 | 50 | 2 | 29 | 130 | 57 | 159 | 1.70e-24 | 103 |
| Msa0274230 | AT5G27607.1 | 89.286 | 28 | 3 | 0 | 104 | 131 | 78 | 105 | 3.29e-12 | 63.5 |
Find 118 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTTCCCATGGAGGTTA+TGG | 0.185250 | 2_3:+6033573 | Msa0274230:CDS |
| AACAGTCTGTTCATTAGTTT+TGG | 0.224880 | 2_3:-6035926 | None:intergenic |
| AACTTAGCACTTAGTTTCTT+TGG | 0.247885 | 2_3:+6036584 | Msa0274230:three_prime_UTR |
| TTAGGTTGTTTGCTCGCTTA+TGG | 0.255350 | 2_3:+6034561 | Msa0274230:intron |
| TTGAACAGCCTTGTTGTATT+TGG | 0.268596 | 2_3:-6036268 | None:intergenic |
| AGAGTTCAAACTTGGTATTT+TGG | 0.274285 | 2_3:+6034720 | Msa0274230:CDS |
| TTGAATACAGATGTATTCTT+TGG | 0.283103 | 2_3:+6036535 | Msa0274230:three_prime_UTR |
| GGTGTTCCCATGGAGGTTAT+GGG | 0.289500 | 2_3:+6033574 | Msa0274230:CDS |
| GATCCAATTCAAAGTGTTAA+AGG | 0.297544 | 2_3:+6035539 | Msa0274230:CDS |
| TAATTCTATTATTATATTGC+AGG | 0.300785 | 2_3:+6036636 | Msa0274230:three_prime_UTR |
| TTCATTCTTCCTGTAATTGA+TGG | 0.301331 | 2_3:-6035824 | None:intergenic |
| GGATTTGGCTGTTGGTTGTC+TGG | 0.310169 | 2_3:+6034088 | Msa0274230:CDS |
| ATTCCATAGCCATCAATTAC+AGG | 0.318521 | 2_3:+6035815 | Msa0274230:CDS |
| TTTCCTTTAACACTTTGAAT+TGG | 0.338465 | 2_3:-6035542 | None:intergenic |
| TATCATTCACATCCTGGATT+TGG | 0.349236 | 2_3:+6034073 | Msa0274230:CDS |
| AGACTTGTTCGGATGAATCT+AGG | 0.351262 | 2_3:-6033332 | None:intergenic |
| ATGCTCTTCGAGGTGCTTCT+TGG | 0.355935 | 2_3:-6036349 | None:intergenic |
| AGCCCAGATCCGATCTTCTT+GGG | 0.362520 | 2_3:-6034625 | None:intergenic |
| GAATCTAGGGTTGGAGAATC+TGG | 0.362906 | 2_3:-6033318 | None:intergenic |
| CTTGATATGCTCAAACAAAC+TGG | 0.363131 | 2_3:+6033718 | Msa0274230:CDS |
| CAGCCCAGATCCGATCTTCT+TGG | 0.372753 | 2_3:-6034626 | None:intergenic |
| TAATATTTCTATCTCTGATT+CGG | 0.376148 | 2_3:-6033114 | None:intergenic |
| CTCTTTAGGCATTGATCCAT+GGG | 0.379104 | 2_3:+6035776 | Msa0274230:intron |
| CTGGACCGTCTGTTCTTGAT+TGG | 0.383072 | 2_3:-6034699 | None:intergenic |
| CACATCCTGGATTTGGCTGT+TGG | 0.391614 | 2_3:+6034080 | Msa0274230:CDS |
| TCTAACATCGTTCAAACTCT+TGG | 0.396438 | 2_3:+6036390 | Msa0274230:CDS |
| TCTGAATAAACCATCCATTC+AGG | 0.402001 | 2_3:+6035652 | Msa0274230:CDS |
| AAGGCAGACAACTTCCAATC+TGG | 0.404764 | 2_3:+6035625 | Msa0274230:CDS |
| TCTCTTTAGGCATTGATCCA+TGG | 0.408154 | 2_3:+6035775 | Msa0274230:intron |
| TTCCCCAAGAAGATCGGATC+TGG | 0.411677 | 2_3:+6034622 | Msa0274230:CDS |
| TTTGATGCTTGGAGAATTTG+TGG | 0.413116 | 2_3:+6033597 | Msa0274230:CDS |
| ATTTGCTATTGCAAGTTTCT+CGG | 0.414356 | 2_3:-6036310 | None:intergenic |
| AATATAGTCTGAGAATAATC+AGG | 0.430400 | 2_3:-6036512 | None:intergenic |
| AGATTGGAAGTTGTCTGCCT+TGG | 0.433636 | 2_3:-6035623 | None:intergenic |
| CTAGGGGAAGACCGCAGTTA+AGG | 0.438316 | 2_3:-6034761 | None:intergenic |
| CATTGATCCATGGGTTGAAC+CGG | 0.440732 | 2_3:+6035785 | Msa0274230:CDS |
| CAAAGAATGTTCGCAGGTGC+AGG | 0.448769 | 2_3:+6033273 | Msa0274230:CDS |
| GGCTGGTATCATTCACATCC+TGG | 0.450530 | 2_3:+6034067 | Msa0274230:CDS |
| GAGGTTATGGGTTTGATGCT+TGG | 0.451218 | 2_3:+6033586 | Msa0274230:CDS |
| TTTGCTATTGCAAGTTTCTC+GGG | 0.452950 | 2_3:-6036309 | None:intergenic |
| ATAGAAAACACGTTACATAA+AGG | 0.454862 | 2_3:+6036688 | Msa0274230:three_prime_UTR |
| ATGGTTAATCTAGCATGTTA+AGG | 0.470634 | 2_3:+6036460 | Msa0274230:three_prime_UTR |
| AGTATACCAGGTAATATCAA+TGG | 0.472239 | 2_3:-6036612 | None:intergenic |
| AAGCATACAGTGCATACTAT+AGG | 0.475426 | 2_3:-6034596 | None:intergenic |
| AATTTGAGACATGCTCTTCG+AGG | 0.480365 | 2_3:-6036359 | None:intergenic |
| TGCAGACCAGAGATGGTTGT+TGG | 0.483028 | 2_3:+6034046 | Msa0274230:intron |
| GCAATGCCACAGAGTGGAAC+TGG | 0.486016 | 2_3:+6033652 | Msa0274230:CDS |
| CTTCCTGTAATTGATGGCTA+TGG | 0.489960 | 2_3:-6035818 | None:intergenic |
| AACTAATGAACAGACTGTTC+AGG | 0.493790 | 2_3:+6035930 | Msa0274230:CDS |
| TACCAGCCAACAACCATCTC+TGG | 0.496380 | 2_3:-6034052 | None:intergenic |
| GGATGAGATGTAGACTTGTT+CGG | 0.496633 | 2_3:-6033343 | None:intergenic |
| ATTCTTTGGACGAGCTGAAA+AGG | 0.501523 | 2_3:+6036549 | Msa0274230:three_prime_UTR |
| TTTATTCAGATGTCCCAGAT+TGG | 0.501681 | 2_3:-6035639 | None:intergenic |
| TGAATCGATGAATCTGTGTT+GGG | 0.502473 | 2_3:-6033236 | None:intergenic |
| GCAGGTGCAGGTGGAGCCCT+AGG | 0.507158 | 2_3:+6033285 | Msa0274230:CDS |
| AAACTTGCAATAGCAAATGT+TGG | 0.510302 | 2_3:+6036315 | Msa0274230:CDS |
| GTGACTCCATTGATATTACC+TGG | 0.511607 | 2_3:+6036606 | Msa0274230:three_prime_UTR |
| CTTAGTTTCCCCAAGAAGAT+CGG | 0.514901 | 2_3:+6034616 | Msa0274230:CDS |
| TGTCCAAGCATCATTGTCTG+TGG | 0.515753 | 2_3:-6035596 | None:intergenic |
| GACTTGTTCGGATGAATCTA+GGG | 0.516752 | 2_3:-6033331 | None:intergenic |
| GACAACCAACAGCCAAATCC+AGG | 0.516917 | 2_3:-6034085 | None:intergenic |
| GTTTGAGTTACGCACCTGAA+TGG | 0.524957 | 2_3:-6035666 | None:intergenic |
| ACCGTCTGTTCTTGATTGGA+CGG | 0.526631 | 2_3:-6034695 | None:intergenic |
| GGACTGATGGCTTGACACTT+AGG | 0.529421 | 2_3:+6035887 | Msa0274230:CDS |
| CATCAAACCCATAACCTCCA+TGG | 0.530750 | 2_3:-6033581 | None:intergenic |
| GAGAGCCGTGGCTGTAGTTG+TGG | 0.532971 | 2_3:+6035517 | Msa0274230:CDS |
| AATAATGCCGGTTCAACCCA+TGG | 0.533545 | 2_3:-6035792 | None:intergenic |
| AAGTCGATGGCGAAGTAAAG+AGG | 0.542405 | 2_3:-6033167 | None:intergenic |
| TTAACAATAATAGGTAGGGC+TGG | 0.544991 | 2_3:+6033553 | Msa0274230:intron |
| AGGTAGGGCTGGTGTTCCCA+TGG | 0.547536 | 2_3:+6033564 | Msa0274230:intron |
| AGGCAGACAACTTCCAATCT+GGG | 0.548081 | 2_3:+6035626 | Msa0274230:CDS |
| GAGTTACGCACCTGAATGGA+TGG | 0.549238 | 2_3:-6035662 | None:intergenic |
| TGTTCGGATGAATCTAGGGT+TGG | 0.556841 | 2_3:-6033327 | None:intergenic |
| ACAGATTCATCGATTCATCA+TGG | 0.557263 | 2_3:+6033242 | Msa0274230:exon |
| GACCAGAGATGGTTGTTGGC+TGG | 0.560653 | 2_3:+6034050 | Msa0274230:intron |
| AATCCACAGACAATGATGCT+TGG | 0.566917 | 2_3:+6035593 | Msa0274230:CDS |
| AAAATACCAAGTTTGAACTC+TGG | 0.567421 | 2_3:-6034718 | None:intergenic |
| GACGGTCCAGAGTTCAAACT+TGG | 0.572939 | 2_3:+6034712 | Msa0274230:CDS |
| TCCCCAAGAAGATCGGATCT+GGG | 0.573423 | 2_3:+6034623 | Msa0274230:CDS |
| ATGAATCGATGAATCTGTGT+TGG | 0.575503 | 2_3:-6033237 | None:intergenic |
| GAAGTTGAAGTTGAAGTCGA+TGG | 0.580205 | 2_3:-6033180 | None:intergenic |
| AGAATGTTCGCAGGTGCAGG+TGG | 0.582287 | 2_3:+6033276 | Msa0274230:CDS |
| AGGGTTGGAGAATCTGGTGG+TGG | 0.583084 | 2_3:-6033312 | None:intergenic |
| AATCTGGTGGTGGATGACCT+AGG | 0.583160 | 2_3:-6033302 | None:intergenic |
| ATCAAACCCATAACCTCCAT+GGG | 0.586388 | 2_3:-6033580 | None:intergenic |
| AATTCAAAGTGTTAAAGGAA+AGG | 0.587669 | 2_3:+6035544 | Msa0274230:CDS |
| ATCTGGTGGTGGATGACCTA+GGG | 0.587858 | 2_3:-6033301 | None:intergenic |
| ATACAACAAGGCTGTTCAAG+AGG | 0.587968 | 2_3:+6036272 | Msa0274230:CDS |
| ATTGTGTTGCAGACCAGAGA+TGG | 0.597906 | 2_3:+6034039 | Msa0274230:intron |
| TAATAGAATTAAAGTATACC+AGG | 0.598716 | 2_3:-6036624 | None:intergenic |
| TGGAAATTCCGCCTTAACTG+CGG | 0.605950 | 2_3:+6034750 | Msa0274230:CDS |
| TTCATCGATTCATCATGGAA+AGG | 0.606178 | 2_3:+6033247 | Msa0274230:exon |
| ATATGCTCAAACAAACTGGA+AGG | 0.606861 | 2_3:+6033722 | Msa0274230:CDS |
| GCCCAGATCCGATCTTCTTG+GGG | 0.610918 | 2_3:-6034624 | None:intergenic |
| TCAAAGTGTTAAAGGAAAGG+TGG | 0.613319 | 2_3:+6035547 | Msa0274230:CDS |
| TGGCTATGGAATAATAATGC+CGG | 0.615459 | 2_3:-6035804 | None:intergenic |
| AGGCTTCAAAGAATGTTCGC+AGG | 0.619756 | 2_3:+6033267 | Msa0274230:CDS |
| TTGATTGGACGGTACATACG+TGG | 0.620140 | 2_3:-6034684 | None:intergenic |
| AGTCGATGGCGAAGTAAAGA+GGG | 0.620664 | 2_3:-6033166 | None:intergenic |
| TTGGACGGTACATACGTGGT+TGG | 0.623303 | 2_3:-6034680 | None:intergenic |
| TAGGGCTGGTGTTCCCATGG+AGG | 0.627642 | 2_3:+6033567 | Msa0274230:CDS |
| GGGGAAGACCGCAGTTAAGG+CGG | 0.628694 | 2_3:-6034758 | None:intergenic |
| AAGCATCTTGAGAAGAGCGA+GGG | 0.629521 | 2_3:-6033364 | None:intergenic |
| GGCTTTGAATCAGAGAGCCG+TGG | 0.631150 | 2_3:+6035505 | Msa0274230:CDS |
| TGGATCCACAACTACAGCCA+CGG | 0.635765 | 2_3:-6035522 | None:intergenic |
| CTTAGCTACCAAATACAACA+AGG | 0.639370 | 2_3:+6036260 | Msa0274230:CDS |
| TGTTGACATCAATACACAGC+AGG | 0.639510 | 2_3:+6034111 | Msa0274230:CDS |
| GTTGGCTGCATGCAGCCACA+AGG | 0.646321 | 2_3:-6034662 | None:intergenic |
| TAAGCATCTTGAGAAGAGCG+AGG | 0.654674 | 2_3:-6033365 | None:intergenic |
| TGCGTGCAGTCACAACCTTG+TGG | 0.656939 | 2_3:+6034647 | Msa0274230:CDS |
| ACCGTCCAATCAAGAACAGA+CGG | 0.660489 | 2_3:+6034694 | Msa0274230:CDS |
| TTACAGGAAGAATGAACTCG+AGG | 0.664198 | 2_3:+6035831 | Msa0274230:CDS |
| GAATCGATGAATCTGTGTTG+GGG | 0.664991 | 2_3:-6033235 | None:intergenic |
| CTTCTCAAGATGCTTAAACA+CGG | 0.678967 | 2_3:+6033372 | Msa0274230:CDS |
| TCTAGGGTTGGAGAATCTGG+TGG | 0.686607 | 2_3:-6033315 | None:intergenic |
| CTAACACCAGTTCCACTCTG+TGG | 0.696288 | 2_3:-6033658 | None:intergenic |
| TGATGCTTGGACAAGAACCA+AGG | 0.701272 | 2_3:+6035606 | Msa0274230:CDS |
| GTGTTTGCAATGCCACAGAG+TGG | 0.719761 | 2_3:+6033646 | Msa0274230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTTTAAAAAAATAAAAT+CGG | + | chr2_3:6034945-6034964 | Msa0274230:intron | 10.0% |
| !!! | GTGTTTTTTTTAACAATAAT+AGG | + | chr2_3:6033544-6033563 | Msa0274230:intron | 15.0% |
| !!! | TTTTTTTAACAATAATAGGT+AGG | + | chr2_3:6033548-6033567 | Msa0274230:intron | 15.0% |
| !!! | TTTTTTAACAATAATAGGTA+GGG | + | chr2_3:6033549-6033568 | Msa0274230:intron | 15.0% |
| !! | AGTTATTAATTTACTTTCAA+TGG | + | chr2_3:6034262-6034281 | Msa0274230:intron | 15.0% |
| !! | AAATGAGTTTGATTAATTTA+AGG | + | chr2_3:6035076-6035095 | Msa0274230:intron | 15.0% |
| !!! | TAAGATTTTCATTCATTAAA+TGG | - | chr2_3:6035196-6035215 | None:intergenic | 15.0% |
| !!! | TTTTTTTGGATGTATTATTT+TGG | + | chr2_3:6035717-6035736 | Msa0274230:intron | 15.0% |
| !! | TAATTCTATTATTATATTGC+AGG | + | chr2_3:6036636-6036655 | Msa0274230:three_prime_UTR | 15.0% |
| !!! | TTTTTAACTTCATCAAATCA+TGG | + | chr2_3:6033488-6033507 | Msa0274230:intron | 20.0% |
| !!! | TTTTAACTTCATCAAATCAT+GGG | + | chr2_3:6033489-6033508 | Msa0274230:intron | 20.0% |
| !! | GGTATTTCAATTTCAAAATT+AGG | + | chr2_3:6033510-6033529 | Msa0274230:intron | 20.0% |
| !!! | TATTATAATTTTTGACGACA+TGG | + | chr2_3:6034233-6034252 | Msa0274230:intron | 20.0% |
| !! | TTTAAAAGCTGTTGAAATTT+GGG | - | chr2_3:6034935-6034954 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGCTGTTGAAATT+TGG | - | chr2_3:6034936-6034955 | None:intergenic | 20.0% |
| !!! | AGTTGTAATCTTGTTTTTAA+AGG | + | chr2_3:6035135-6035154 | Msa0274230:intron | 20.0% |
| !!! | GTTGTAATCTTGTTTTTAAA+GGG | + | chr2_3:6035136-6035155 | Msa0274230:intron | 20.0% |
| !!! | AAGTCAATATTTTTTAAGCA+TGG | + | chr2_3:6035238-6035257 | Msa0274230:intron | 20.0% |
| !! | AATTTCAATTATCAAGACAA+TGG | - | chr2_3:6035339-6035358 | None:intergenic | 20.0% |
| !!! | ATCAACGTAATTCAAATTTT+TGG | - | chr2_3:6035373-6035392 | None:intergenic | 20.0% |
| !!! | ACTTGTTTCTAATTAGTTAT+TGG | + | chr2_3:6035430-6035449 | Msa0274230:intron | 20.0% |
| !!! | CGATATTCATACAATTTTTT+TGG | + | chr2_3:6035703-6035722 | Msa0274230:intron | 20.0% |
| !! | TTAATCTTCACAAAAAGAAA+TGG | + | chr2_3:6035866-6035885 | Msa0274230:CDS | 20.0% |
| !! | GTTTATTTGATTAATCAGAT+AGG | - | chr2_3:6035997-6036016 | None:intergenic | 20.0% |
| !!! | CCGTTTTTAAATCTAAAAAT+CGG | - | chr2_3:6036041-6036060 | None:intergenic | 20.0% |
| !!! | CCGATTTTTAGATTTAAAAA+CGG | + | chr2_3:6036038-6036057 | Msa0274230:intron | 20.0% |
| !!! | TCTCAATTAATTTGAAATGT+AGG | + | chr2_3:6036227-6036246 | Msa0274230:intron | 20.0% |
| !! | TAATAGAATTAAAGTATACC+AGG | - | chr2_3:6036627-6036646 | None:intergenic | 20.0% |
| ! | TCTTTAACCTAATCAAATCA+TGG | + | chr2_3:6033406-6033425 | Msa0274230:intron | 25.0% |
| ! | CTTTAACCTAATCAAATCAT+GGG | + | chr2_3:6033407-6033426 | Msa0274230:intron | 25.0% |
| ! | GCTATCCAATTTCATAATTA+GGG | + | chr2_3:6033429-6033448 | Msa0274230:intron | 25.0% |
| ! | CAAAACCCTAATTATGAAAT+TGG | - | chr2_3:6033437-6033456 | None:intergenic | 25.0% |
| !! | ATGCTAAGATTTGTTCATTT+AGG | + | chr2_3:6033763-6033782 | Msa0274230:intron | 25.0% |
| !! | TGCTAAGATTTGTTCATTTA+GGG | + | chr2_3:6033764-6033783 | Msa0274230:intron | 25.0% |
| ! | AACATGAATAACACAATGTT+TGG | - | chr2_3:6034007-6034026 | None:intergenic | 25.0% |
| !! | AATCCAAAGTATTTATGTGT+CGG | + | chr2_3:6034180-6034199 | Msa0274230:intron | 25.0% |
| ! | CACTAAAATCAAAACTATCT+AGG | - | chr2_3:6034211-6034230 | None:intergenic | 25.0% |
| ! | TTTCCAAAACAGAGTAAATT+AGG | - | chr2_3:6034383-6034402 | None:intergenic | 25.0% |
| ! | ATTATGATGAGACTGATAAT+AGG | - | chr2_3:6034529-6034548 | None:intergenic | 25.0% |
| ! | TTAAAAGCTGTTGAAATTTG+GGG | - | chr2_3:6034934-6034953 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTAAAGGGATTTT+AGG | + | chr2_3:6035144-6035163 | Msa0274230:intron | 25.0% |
| !! | TCATAACTGTTAGATTTTGT+CGG | + | chr2_3:6035168-6035187 | Msa0274230:intron | 25.0% |
| !!! | TATTGACTTTCTAAGAAATC+AGG | - | chr2_3:6035227-6035246 | None:intergenic | 25.0% |
| !! | AAAATATTTTCCGTTATCAG+TGG | + | chr2_3:6035306-6035325 | Msa0274230:intron | 25.0% |
| ! | GTTTCTAATTAGTTATTGGT+TGG | + | chr2_3:6035434-6035453 | Msa0274230:intron | 25.0% |
| ! | TTTCCTTTAACACTTTGAAT+TGG | - | chr2_3:6035545-6035564 | None:intergenic | 25.0% |
| !! | AATTCAAAGTGTTAAAGGAA+AGG | + | chr2_3:6035544-6035563 | Msa0274230:CDS | 25.0% |
| ! | TATAAGTTTCATAAGCTTTC+AGG | + | chr2_3:6036156-6036175 | Msa0274230:intron | 25.0% |
| ! | ATAAGTTTCATAAGCTTTCA+GGG | + | chr2_3:6036157-6036176 | Msa0274230:intron | 25.0% |
| ! | TTGAGATCTATTAGTATCTA+GGG | - | chr2_3:6036213-6036232 | None:intergenic | 25.0% |
| ! | ATTGAGATCTATTAGTATCT+AGG | - | chr2_3:6036214-6036233 | None:intergenic | 25.0% |
| ! | AATATAGTCTGAGAATAATC+AGG | - | chr2_3:6036515-6036534 | None:intergenic | 25.0% |
| ! | TTGAATACAGATGTATTCTT+TGG | + | chr2_3:6036535-6036554 | Msa0274230:three_prime_UTR | 25.0% |
| !! | TTTATGTAACGTGTTTTCTA+TGG | - | chr2_3:6036689-6036708 | None:intergenic | 25.0% |
| ! | ATAGAAAACACGTTACATAA+AGG | + | chr2_3:6036688-6036707 | Msa0274230:three_prime_UTR | 25.0% |
| GGCTATCCAATTTCATAATT+AGG | + | chr2_3:6033428-6033447 | Msa0274230:intron | 30.0% | |
| ! | TAAGATTTGTTCATTTAGGG+TGG | + | chr2_3:6033767-6033786 | Msa0274230:intron | 30.0% |
| TAAACACTTGTTTGAGCTTA+TGG | + | chr2_3:6033819-6033838 | Msa0274230:intron | 30.0% | |
| TTCATGGCATCATTCATAAA+CGG | + | chr2_3:6033848-6033867 | Msa0274230:intron | 30.0% | |
| ATATAAGCACTTATGTGACA+AGG | + | chr2_3:6033962-6033981 | Msa0274230:intron | 30.0% | |
| TATAAGCACTTATGTGACAA+GGG | + | chr2_3:6033963-6033982 | Msa0274230:intron | 30.0% | |
| GATACAGAAACAAGACATAA+AGG | - | chr2_3:6034149-6034168 | None:intergenic | 30.0% | |
| GACACATAAATACTTTGGAT+TGG | - | chr2_3:6034181-6034200 | None:intergenic | 30.0% | |
| ! | TAATTTTTGACGACATGGTT+TGG | + | chr2_3:6034238-6034257 | Msa0274230:intron | 30.0% |
| ! | ATTTTGCTGAACACTCTTTT+TGG | + | chr2_3:6034355-6034374 | Msa0274230:intron | 30.0% |
| ! | GTTCCTAATTTACTCTGTTT+TGG | + | chr2_3:6034377-6034396 | Msa0274230:intron | 30.0% |
| !!! | TCTGTTTTGGAAAAGTTTTG+TGG | + | chr2_3:6034390-6034409 | Msa0274230:intron | 30.0% |
| GTGGAAAGAACATTAGTTAA+TGG | + | chr2_3:6034409-6034428 | Msa0274230:intron | 30.0% | |
| AAAATACCAAGTTTGAACTC+TGG | - | chr2_3:6034721-6034740 | None:intergenic | 30.0% | |
| ! | AGAGTTCAAACTTGGTATTT+TGG | + | chr2_3:6034720-6034739 | Msa0274230:CDS | 30.0% |
| CTAATTCATCCTTACAAAAC+CGG | - | chr2_3:6034910-6034929 | None:intergenic | 30.0% | |
| ! | ATAAAATCGGCATTGAAATC+TGG | + | chr2_3:6034958-6034977 | Msa0274230:intron | 30.0% |
| AAACAAGATTACAACTGCAA+TGG | - | chr2_3:6035131-6035150 | None:intergenic | 30.0% | |
| ! | CATAACTGTTAGATTTTGTC+GGG | + | chr2_3:6035169-6035188 | Msa0274230:intron | 30.0% |
| ! | ATAACTGTTAGATTTTGTCG+GGG | + | chr2_3:6035170-6035189 | Msa0274230:intron | 30.0% |
| ! | ATTAAGAGCTCCTTATTTGA+GGG | - | chr2_3:6035278-6035297 | None:intergenic | 30.0% |
| ! | GTTGATCGAAGTTTTCATTT+AGG | + | chr2_3:6035387-6035406 | Msa0274230:intron | 30.0% |
| ! | AAGTTTTCATTTAGGTCTAG+TGG | + | chr2_3:6035395-6035414 | Msa0274230:intron | 30.0% |
| ! | GATCCAATTCAAAGTGTTAA+AGG | + | chr2_3:6035539-6035558 | Msa0274230:CDS | 30.0% |
| GTATCATATTACCTCTCTTT+AGG | + | chr2_3:6035762-6035781 | Msa0274230:intron | 30.0% | |
| TTCATTCTTCCTGTAATTGA+TGG | - | chr2_3:6035827-6035846 | None:intergenic | 30.0% | |
| !! | AACAGTCTGTTCATTAGTTT+TGG | - | chr2_3:6035929-6035948 | None:intergenic | 30.0% |
| TTGATTAATCAGATAGGCAA+CGG | - | chr2_3:6035991-6036010 | None:intergenic | 30.0% | |
| !! | ATTTGCTATTGCAAGTTTCT+CGG | - | chr2_3:6036313-6036332 | None:intergenic | 30.0% |
| AAACTTGCAATAGCAAATGT+TGG | + | chr2_3:6036315-6036334 | Msa0274230:CDS | 30.0% | |
| !!! | AGTTGTCTTTTTGGAACTTA+TGG | + | chr2_3:6036441-6036460 | Msa0274230:three_prime_UTR | 30.0% |
| ATGGTTAATCTAGCATGTTA+AGG | + | chr2_3:6036460-6036479 | Msa0274230:three_prime_UTR | 30.0% | |
| AACTTAGCACTTAGTTTCTT+TGG | + | chr2_3:6036584-6036603 | Msa0274230:three_prime_UTR | 30.0% | |
| AGTATACCAGGTAATATCAA+TGG | - | chr2_3:6036615-6036634 | None:intergenic | 30.0% | |
| ! | TATTGCAGGATTTTATGTTC+AGG | + | chr2_3:6036650-6036669 | Msa0274230:three_prime_UTR | 30.0% |
| TGAATCGATGAATCTGTGTT+GGG | - | chr2_3:6033239-6033258 | None:intergenic | 35.0% | |
| ATGAATCGATGAATCTGTGT+TGG | - | chr2_3:6033240-6033259 | None:intergenic | 35.0% | |
| !! | ACAGATTCATCGATTCATCA+TGG | + | chr2_3:6033242-6033261 | Msa0274230:exon | 35.0% |
| !! | TTCATCGATTCATCATGGAA+AGG | + | chr2_3:6033247-6033266 | Msa0274230:exon | 35.0% |
| CTTCTCAAGATGCTTAAACA+CGG | + | chr2_3:6033372-6033391 | Msa0274230:CDS | 35.0% | |
| TTAACAATAATAGGTAGGGC+TGG | + | chr2_3:6033553-6033572 | Msa0274230:intron | 35.0% | |
| TTTGATGCTTGGAGAATTTG+TGG | + | chr2_3:6033597-6033616 | Msa0274230:CDS | 35.0% | |
| CTTGATATGCTCAAACAAAC+TGG | + | chr2_3:6033718-6033737 | Msa0274230:CDS | 35.0% | |
| ATATGCTCAAACAAACTGGA+AGG | + | chr2_3:6033722-6033741 | Msa0274230:CDS | 35.0% | |
| GAGCTTATGGAAATAGTTCA+TGG | + | chr2_3:6033832-6033851 | Msa0274230:intron | 35.0% | |
| TATCATTCACATCCTGGATT+TGG | + | chr2_3:6034073-6034092 | Msa0274230:CDS | 35.0% | |
| CAACCGACACATAAATACTT+TGG | - | chr2_3:6034186-6034205 | None:intergenic | 35.0% | |
| ATTCACGTCAAAGAGATTCA+CGG | - | chr2_3:6034295-6034314 | None:intergenic | 35.0% | |
| ! | GATATGAGGATTGGTATAGT+GGG | - | chr2_3:6034485-6034504 | None:intergenic | 35.0% |
| AGTTGTTACGATATGAGGAT+TGG | - | chr2_3:6034494-6034513 | None:intergenic | 35.0% | |
| AAGCATACAGTGCATACTAT+AGG | - | chr2_3:6034599-6034618 | None:intergenic | 35.0% | |
| !!! | CTTGGTATTTTGGCTTTTGT+TGG | + | chr2_3:6034730-6034749 | Msa0274230:CDS | 35.0% |
| !! | CGGTTTTGTAAGGATGAATT+AGG | + | chr2_3:6034908-6034927 | Msa0274230:intron | 35.0% |
| ! | GATTAAGAGCTCCTTATTTG+AGG | - | chr2_3:6035279-6035298 | None:intergenic | 35.0% |
| !! | TGGTTTGTTTCCACTGATAA+CGG | - | chr2_3:6035319-6035338 | None:intergenic | 35.0% |
| ! | TCAAAGTGTTAAAGGAAAGG+TGG | + | chr2_3:6035547-6035566 | Msa0274230:CDS | 35.0% |
| TTTATTCAGATGTCCCAGAT+TGG | - | chr2_3:6035642-6035661 | None:intergenic | 35.0% | |
| TCTGAATAAACCATCCATTC+AGG | + | chr2_3:6035652-6035671 | Msa0274230:CDS | 35.0% | |
| TGGCTATGGAATAATAATGC+CGG | - | chr2_3:6035807-6035826 | None:intergenic | 35.0% | |
| ATTCCATAGCCATCAATTAC+AGG | + | chr2_3:6035815-6035834 | Msa0274230:CDS | 35.0% | |
| !! | CACAAAAAGAAATGGACTGA+TGG | + | chr2_3:6035874-6035893 | Msa0274230:CDS | 35.0% |
| AACTAATGAACAGACTGTTC+AGG | + | chr2_3:6035930-6035949 | Msa0274230:CDS | 35.0% | |
| CTTAGCTACCAAATACAACA+AGG | + | chr2_3:6036260-6036279 | Msa0274230:CDS | 35.0% | |
| !! | TTGAACAGCCTTGTTGTATT+TGG | - | chr2_3:6036271-6036290 | None:intergenic | 35.0% |
| !! | TTTGCTATTGCAAGTTTCTC+GGG | - | chr2_3:6036312-6036331 | None:intergenic | 35.0% |
| TCTAACATCGTTCAAACTCT+TGG | + | chr2_3:6036390-6036409 | Msa0274230:CDS | 35.0% | |
| !!! | GTCTTCTAGAGTTGTCTTTT+TGG | + | chr2_3:6036432-6036451 | Msa0274230:exon | 35.0% |
| GAAGTTGAAGTTGAAGTCGA+TGG | - | chr2_3:6033183-6033202 | None:intergenic | 40.0% | |
| GAATCGATGAATCTGTGTTG+GGG | - | chr2_3:6033238-6033257 | None:intergenic | 40.0% | |
| ! | GACTTGTTCGGATGAATCTA+GGG | - | chr2_3:6033334-6033353 | None:intergenic | 40.0% |
| ! | AGACTTGTTCGGATGAATCT+AGG | - | chr2_3:6033335-6033354 | None:intergenic | 40.0% |
| ! | GGATGAGATGTAGACTTGTT+CGG | - | chr2_3:6033346-6033365 | None:intergenic | 40.0% |
| GGATAGCCCATGATTTGATT+AGG | - | chr2_3:6033416-6033435 | None:intergenic | 40.0% | |
| ATCAAACCCATAACCTCCAT+GGG | - | chr2_3:6033583-6033602 | None:intergenic | 40.0% | |
| TGTTGACATCAATACACAGC+AGG | + | chr2_3:6034111-6034130 | Msa0274230:CDS | 40.0% | |
| ATACACAGCAGGTTCTACTA+TGG | + | chr2_3:6034122-6034141 | Msa0274230:intron | 40.0% | |
| !! | TATAGTGGGTTGGCAAAGTT+GGG | - | chr2_3:6034471-6034490 | None:intergenic | 40.0% |
| ! | CGATATGAGGATTGGTATAG+TGG | - | chr2_3:6034486-6034505 | None:intergenic | 40.0% |
| GTCAGAGTTGTTACGATATG+AGG | - | chr2_3:6034499-6034518 | None:intergenic | 40.0% | |
| CATAATAGCCACTGTGACTT+AGG | + | chr2_3:6034543-6034562 | Msa0274230:intron | 40.0% | |
| ! | TTAGGTTGTTTGCTCGCTTA+TGG | + | chr2_3:6034561-6034580 | Msa0274230:intron | 40.0% |
| CTTAGTTTCCCCAAGAAGAT+CGG | + | chr2_3:6034616-6034635 | Msa0274230:CDS | 40.0% | |
| CTTCATTGTGTTGCCTTTGA+GGG | + | chr2_3:6034832-6034851 | Msa0274230:intron | 40.0% | |
| TTCATTGTGTTGCCTTTGAG+GGG | + | chr2_3:6034833-6034852 | Msa0274230:intron | 40.0% | |
| CATTGAAATCTGGATCACCA+AGG | + | chr2_3:6034968-6034987 | Msa0274230:intron | 40.0% | |
| AGAATACTTTGCACGCTGTT+TGG | - | chr2_3:6035026-6035045 | None:intergenic | 40.0% | |
| AGATTACAACTGCAATGGAC+CGG | - | chr2_3:6035126-6035145 | None:intergenic | 40.0% | |
| AATCCACAGACAATGATGCT+TGG | + | chr2_3:6035593-6035612 | Msa0274230:CDS | 40.0% | |
| ATGGATCAATGCCTAAAGAG+AGG | - | chr2_3:6035776-6035795 | None:intergenic | 40.0% | |
| !! | TCTCTTTAGGCATTGATCCA+TGG | + | chr2_3:6035775-6035794 | Msa0274230:intron | 40.0% |
| !! | CTCTTTAGGCATTGATCCAT+GGG | + | chr2_3:6035776-6035795 | Msa0274230:intron | 40.0% |
| ! | CTTCCTGTAATTGATGGCTA+TGG | - | chr2_3:6035821-6035840 | None:intergenic | 40.0% |
| TTACAGGAAGAATGAACTCG+AGG | + | chr2_3:6035831-6035850 | Msa0274230:CDS | 40.0% | |
| TTAAGATGCAGCGTGTAATG+TGG | + | chr2_3:6035958-6035977 | Msa0274230:intron | 40.0% | |
| TAAGATGCAGCGTGTAATGT+GGG | + | chr2_3:6035959-6035978 | Msa0274230:intron | 40.0% | |
| AAGCTTTCAGGGAGAACTTA+TGG | + | chr2_3:6036168-6036187 | Msa0274230:intron | 40.0% | |
| ATACAACAAGGCTGTTCAAG+AGG | + | chr2_3:6036272-6036291 | Msa0274230:CDS | 40.0% | |
| ! | AATTTGAGACATGCTCTTCG+AGG | - | chr2_3:6036362-6036381 | None:intergenic | 40.0% |
| ATTCTTTGGACGAGCTGAAA+AGG | + | chr2_3:6036549-6036568 | Msa0274230:three_prime_UTR | 40.0% | |
| GTGACTCCATTGATATTACC+TGG | + | chr2_3:6036606-6036625 | Msa0274230:three_prime_UTR | 40.0% | |
| AGTCGATGGCGAAGTAAAGA+GGG | - | chr2_3:6033169-6033188 | None:intergenic | 45.0% | |
| AAGTCGATGGCGAAGTAAAG+AGG | - | chr2_3:6033170-6033189 | None:intergenic | 45.0% | |
| AGGCTTCAAAGAATGTTCGC+AGG | + | chr2_3:6033267-6033286 | Msa0274230:CDS | 45.0% | |
| ! | GAATCTAGGGTTGGAGAATC+TGG | - | chr2_3:6033321-6033340 | None:intergenic | 45.0% |
| ! | TGTTCGGATGAATCTAGGGT+TGG | - | chr2_3:6033330-6033349 | None:intergenic | 45.0% |
| AAGCATCTTGAGAAGAGCGA+GGG | - | chr2_3:6033367-6033386 | None:intergenic | 45.0% | |
| TAAGCATCTTGAGAAGAGCG+AGG | - | chr2_3:6033368-6033387 | None:intergenic | 45.0% | |
| CATCAAACCCATAACCTCCA+TGG | - | chr2_3:6033584-6033603 | None:intergenic | 45.0% | |
| GAGGTTATGGGTTTGATGCT+TGG | + | chr2_3:6033586-6033605 | Msa0274230:CDS | 45.0% | |
| ATTGTGTTGCAGACCAGAGA+TGG | + | chr2_3:6034039-6034058 | Msa0274230:intron | 45.0% | |
| !! | GTATAGTGGGTTGGCAAAGT+TGG | - | chr2_3:6034472-6034491 | None:intergenic | 45.0% |
| !! | TGAGGATTGGTATAGTGGGT+TGG | - | chr2_3:6034481-6034500 | None:intergenic | 45.0% |
| GCAAACAACCTAAGTCACAG+TGG | - | chr2_3:6034554-6034573 | None:intergenic | 45.0% | |
| TTGATTGGACGGTACATACG+TGG | - | chr2_3:6034687-6034706 | None:intergenic | 45.0% | |
| ACCGTCCAATCAAGAACAGA+CGG | + | chr2_3:6034694-6034713 | Msa0274230:CDS | 45.0% | |
| ACCGTCTGTTCTTGATTGGA+CGG | - | chr2_3:6034698-6034717 | None:intergenic | 45.0% | |
| TGGAAATTCCGCCTTAACTG+CGG | + | chr2_3:6034750-6034769 | Msa0274230:CDS | 45.0% | |
| CAAACCAAAGCCCGCAATTT+AGG | - | chr2_3:6034790-6034809 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr2_3:6034825-6034844 | None:intergenic | 45.0% |
| ! | AGGCAACACAATGAAGGTGT+TGG | - | chr2_3:6034828-6034847 | None:intergenic | 45.0% |
| CCTCAAAGGCAACACAATGA+AGG | - | chr2_3:6034834-6034853 | None:intergenic | 45.0% | |
| CCTTCATTGTGTTGCCTTTG+AGG | + | chr2_3:6034831-6034850 | Msa0274230:intron | 45.0% | |
| ! | TCATTGTGTTGCCTTTGAGG+GGG | + | chr2_3:6034834-6034853 | Msa0274230:intron | 45.0% |
| TGTCCTATCTATCCGATGTG+GGG | - | chr2_3:6034869-6034888 | None:intergenic | 45.0% | |
| GTGTCCTATCTATCCGATGT+GGG | - | chr2_3:6034870-6034889 | None:intergenic | 45.0% | |
| TGTGTCCTATCTATCCGATG+TGG | - | chr2_3:6034871-6034890 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr2_3:6034901-6034920 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr2_3:6034898-6034917 | Msa0274230:intron | 45.0% |
| AAATCTGGATCACCAAGGTG+TGG | + | chr2_3:6034973-6034992 | Msa0274230:intron | 45.0% | |
| CTTTGCACGCTGTTTGGATT+GGG | - | chr2_3:6035020-6035039 | None:intergenic | 45.0% | |
| ACTTTGCACGCTGTTTGGAT+TGG | - | chr2_3:6035021-6035040 | None:intergenic | 45.0% | |
| CAGTACTCTCTCAGATAAGC+TGG | - | chr2_3:6035054-6035073 | None:intergenic | 45.0% | |
| ATCACCCATGCAAGTTATGC+CGG | + | chr2_3:6035104-6035123 | Msa0274230:intron | 45.0% | |
| CTTATTTGAGGGATCAGAGC+AGG | - | chr2_3:6035267-6035286 | None:intergenic | 45.0% | |
| CTGCTCTGATCCCTCAAATA+AGG | + | chr2_3:6035265-6035284 | Msa0274230:intron | 45.0% | |
| !! | TAGTTATTGGTTGGTGCTGC+TGG | + | chr2_3:6035443-6035462 | Msa0274230:intron | 45.0% |
| TCAAAGCCTCAAAACTCTGC+AGG | - | chr2_3:6035493-6035512 | None:intergenic | 45.0% | |
| TGTCCAAGCATCATTGTCTG+TGG | - | chr2_3:6035599-6035618 | None:intergenic | 45.0% | |
| TGATGCTTGGACAAGAACCA+AGG | + | chr2_3:6035606-6035625 | Msa0274230:CDS | 45.0% | |
| AGATTGGAAGTTGTCTGCCT+TGG | - | chr2_3:6035626-6035645 | None:intergenic | 45.0% | |
| AAGGCAGACAACTTCCAATC+TGG | + | chr2_3:6035625-6035644 | Msa0274230:CDS | 45.0% | |
| AGGCAGACAACTTCCAATCT+GGG | + | chr2_3:6035626-6035645 | Msa0274230:CDS | 45.0% | |
| ! | GTTTGAGTTACGCACCTGAA+TGG | - | chr2_3:6035669-6035688 | None:intergenic | 45.0% |
| ! | CATTGATCCATGGGTTGAAC+CGG | + | chr2_3:6035785-6035804 | Msa0274230:CDS | 45.0% |
| !! | AATAATGCCGGTTCAACCCA+TGG | - | chr2_3:6035795-6035814 | None:intergenic | 45.0% |
| CAAAGAATGTTCGCAGGTGC+AGG | + | chr2_3:6033273-6033292 | Msa0274230:CDS | 50.0% | |
| !! | ATCTGGTGGTGGATGACCTA+GGG | - | chr2_3:6033304-6033323 | None:intergenic | 50.0% |
| !! | AATCTGGTGGTGGATGACCT+AGG | - | chr2_3:6033305-6033324 | None:intergenic | 50.0% |
| ! | TCTAGGGTTGGAGAATCTGG+TGG | - | chr2_3:6033318-6033337 | None:intergenic | 50.0% |
| TGGTGTTCCCATGGAGGTTA+TGG | + | chr2_3:6033573-6033592 | Msa0274230:CDS | 50.0% | |
| GGTGTTCCCATGGAGGTTAT+GGG | + | chr2_3:6033574-6033593 | Msa0274230:CDS | 50.0% | |
| GTGTTTGCAATGCCACAGAG+TGG | + | chr2_3:6033646-6033665 | Msa0274230:CDS | 50.0% | |
| CTAACACCAGTTCCACTCTG+TGG | - | chr2_3:6033661-6033680 | None:intergenic | 50.0% | |
| TGCAGACCAGAGATGGTTGT+TGG | + | chr2_3:6034046-6034065 | Msa0274230:intron | 50.0% | |
| TACCAGCCAACAACCATCTC+TGG | - | chr2_3:6034055-6034074 | None:intergenic | 50.0% | |
| GGCTGGTATCATTCACATCC+TGG | + | chr2_3:6034067-6034086 | Msa0274230:CDS | 50.0% | |
| CACATCCTGGATTTGGCTGT+TGG | + | chr2_3:6034080-6034099 | Msa0274230:CDS | 50.0% | |
| GACAACCAACAGCCAAATCC+AGG | - | chr2_3:6034088-6034107 | None:intergenic | 50.0% | |
| ! | GGATTTGGCTGTTGGTTGTC+TGG | + | chr2_3:6034088-6034107 | Msa0274230:CDS | 50.0% |
| TTCCCCAAGAAGATCGGATC+TGG | + | chr2_3:6034622-6034641 | Msa0274230:CDS | 50.0% | |
| TCCCCAAGAAGATCGGATCT+GGG | + | chr2_3:6034623-6034642 | Msa0274230:CDS | 50.0% | |
| AGCCCAGATCCGATCTTCTT+GGG | - | chr2_3:6034628-6034647 | None:intergenic | 50.0% | |
| TTGGACGGTACATACGTGGT+TGG | - | chr2_3:6034683-6034702 | None:intergenic | 50.0% | |
| CTGGACCGTCTGTTCTTGAT+TGG | - | chr2_3:6034702-6034721 | None:intergenic | 50.0% | |
| GACGGTCCAGAGTTCAAACT+TGG | + | chr2_3:6034712-6034731 | Msa0274230:CDS | 50.0% | |
| TCCCCTAGTCGCCTAAATTG+CGG | + | chr2_3:6034776-6034795 | Msa0274230:intron | 50.0% | |
| TAGCCCCACATCGGATAGAT+AGG | + | chr2_3:6034863-6034882 | Msa0274230:intron | 50.0% | |
| ACACTCCTCACCTTACAAGC+CGG | + | chr2_3:6034888-6034907 | Msa0274230:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr2_3:6034896-6034915 | None:intergenic | 50.0% |
| AGTGTGACTGAACCACACCT+TGG | - | chr2_3:6034988-6035007 | None:intergenic | 50.0% | |
| ! | TGGACCGGCATAACTTGCAT+GGG | - | chr2_3:6035111-6035130 | None:intergenic | 50.0% |
| ! | ATGGACCGGCATAACTTGCA+TGG | - | chr2_3:6035112-6035131 | None:intergenic | 50.0% |
| ! | TCGTGTCCTGCAGAGTTTTG+AGG | + | chr2_3:6035484-6035503 | Msa0274230:intron | 50.0% |
| TGGATCCACAACTACAGCCA+CGG | - | chr2_3:6035525-6035544 | None:intergenic | 50.0% | |
| GAGTTACGCACCTGAATGGA+TGG | - | chr2_3:6035665-6035684 | None:intergenic | 50.0% | |
| GGACTGATGGCTTGACACTT+AGG | + | chr2_3:6035887-6035906 | Msa0274230:CDS | 50.0% | |
| ! | ATGCTCTTCGAGGTGCTTCT+TGG | - | chr2_3:6036352-6036371 | None:intergenic | 50.0% |
| AGAATGTTCGCAGGTGCAGG+TGG | + | chr2_3:6033276-6033295 | Msa0274230:CDS | 55.0% | |
| AGGGTTGGAGAATCTGGTGG+TGG | - | chr2_3:6033315-6033334 | None:intergenic | 55.0% | |
| GCAATGCCACAGAGTGGAAC+TGG | + | chr2_3:6033652-6033671 | Msa0274230:CDS | 55.0% | |
| GACCAGAGATGGTTGTTGGC+TGG | + | chr2_3:6034050-6034069 | Msa0274230:intron | 55.0% | |
| GCCCAGATCCGATCTTCTTG+GGG | - | chr2_3:6034627-6034646 | None:intergenic | 55.0% | |
| CAGCCCAGATCCGATCTTCT+TGG | - | chr2_3:6034629-6034648 | None:intergenic | 55.0% | |
| TGCGTGCAGTCACAACCTTG+TGG | + | chr2_3:6034647-6034666 | Msa0274230:CDS | 55.0% | |
| CTAGGGGAAGACCGCAGTTA+AGG | - | chr2_3:6034764-6034783 | None:intergenic | 55.0% | |
| CCCGCAATTTAGGCGACTAG+GGG | - | chr2_3:6034780-6034799 | None:intergenic | 55.0% | |
| CCCCTAGTCGCCTAAATTGC+GGG | + | chr2_3:6034777-6034796 | Msa0274230:intron | 55.0% | |
| GCCCGCAATTTAGGCGACTA+GGG | - | chr2_3:6034781-6034800 | None:intergenic | 55.0% | |
| AGCCCGCAATTTAGGCGACT+AGG | - | chr2_3:6034782-6034801 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGGCTT+TGG | + | chr2_3:6034783-6034802 | Msa0274230:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr2_3:6034813-6034832 | None:intergenic | 55.0% |
| ! | TTGTGTTGCCTTTGAGGGGG+TGG | + | chr2_3:6034837-6034856 | Msa0274230:intron | 55.0% |
| GGCTAAATCCACCCCCTCAA+AGG | - | chr2_3:6034848-6034867 | None:intergenic | 55.0% | |
| ! | GGGTGGATTTAGCCCCACAT+CGG | + | chr2_3:6034854-6034873 | Msa0274230:intron | 55.0% |
| !! | GGCTTTGAATCAGAGAGCCG+TGG | + | chr2_3:6035505-6035524 | Msa0274230:CDS | 55.0% |
| ! | AGGTAGGGCTGGTGTTCCCA+TGG | + | chr2_3:6033564-6033583 | Msa0274230:intron | 60.0% |
| ! | TAGGGCTGGTGTTCCCATGG+AGG | + | chr2_3:6033567-6033586 | Msa0274230:CDS | 60.0% |
| GTTGGCTGCATGCAGCCACA+AGG | - | chr2_3:6034665-6034684 | None:intergenic | 60.0% | |
| GGGGAAGACCGCAGTTAAGG+CGG | - | chr2_3:6034761-6034780 | None:intergenic | 60.0% | |
| GAGAGCCGTGGCTGTAGTTG+TGG | + | chr2_3:6035517-6035536 | Msa0274230:CDS | 60.0% | |
| GCAGGTGCAGGTGGAGCCCT+AGG | + | chr2_3:6033285-6033304 | Msa0274230:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6033115 | 6036720 | 6033115 | ID=Msa0274230;Name=Msa0274230 |
| chr2_3 | mRNA | 6033115 | 6036720 | 6033115 | ID=Msa0274230-mRNA-1;Parent=Msa0274230;Name=Msa0274230-mRNA-1;_AED=0.13;_eAED=0.13;_QI=146|0.66|0.85|0.85|1|1|7|280|378 |
| chr2_3 | exon | 6033115 | 6033393 | 6033115 | ID=Msa0274230-mRNA-1:exon:2742;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6033566 | 6033743 | 6033566 | ID=Msa0274230-mRNA-1:exon:2743;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6034051 | 6034132 | 6034051 | ID=Msa0274230-mRNA-1:exon:2744;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6034565 | 6034771 | 6034565 | ID=Msa0274230-mRNA-1:exon:2745;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6035497 | 6035673 | 6035497 | ID=Msa0274230-mRNA-1:exon:2746;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6035784 | 6035951 | 6035784 | ID=Msa0274230-mRNA-1:exon:2747;Parent=Msa0274230-mRNA-1 |
| chr2_3 | exon | 6036249 | 6036720 | 6036249 | ID=Msa0274230-mRNA-1:exon:2748;Parent=Msa0274230-mRNA-1 |
| chr2_3 | five_prime_UTR | 6033115 | 6033260 | 6033115 | ID=Msa0274230-mRNA-1:five_prime_utr;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6033261 | 6033393 | 6033261 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6033566 | 6033743 | 6033566 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6034051 | 6034132 | 6034051 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6034565 | 6034771 | 6034565 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6035497 | 6035673 | 6035497 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6035784 | 6035951 | 6035784 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | CDS | 6036249 | 6036440 | 6036249 | ID=Msa0274230-mRNA-1:cds;Parent=Msa0274230-mRNA-1 |
| chr2_3 | three_prime_UTR | 6036441 | 6036720 | 6036441 | ID=Msa0274230-mRNA-1:three_prime_utr;Parent=Msa0274230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
