AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1258780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258780 MtrunA17_Chr4g0057951 99.483 387 2 0 1 387 1 387 0.0 783
Msa1258780 MtrunA17_Chr8g0360961 95.673 208 8 1 96 303 2 208 1.06e-142 404
Msa1258780 MtrunA17_Chr8g0357091 84.444 180 6 3 187 366 1 158 6.65e-100 293
Msa1258780 MtrunA17_Chr8g0357081 84.956 113 4 1 85 184 5 117 7.86e-57 181
Msa1258780 MtrunA17_Chr7g0246691 24.291 247 180 3 127 371 173 414 4.33e-19 88.6
Msa1258780 MtrunA17_Chr8g0350361 23.481 362 254 11 23 371 65 416 1.18e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258780 AT4G24820.1 82.687 387 67 0 1 387 1 387 0.0 661
Msa1258780 AT4G24820.2 82.687 387 67 0 1 387 1 387 0.0 661
Msa1258780 AT3G61140.1 25.100 251 180 4 124 372 169 413 5.65e-18 85.5

Find 97 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTGGATGTTCATTAATT+TGG 0.090197 8_2:+60052712 None:intergenic
CAAGAAGTCTCCTTGCTTAA+TGG 0.172394 8_2:+60052904 None:intergenic
TTTAGCTTTGTCAATGCTTT+TGG 0.209748 8_2:+60053986 None:intergenic
CGATCACACGAGACAGTTTC+TGG 0.218957 8_2:+60052870 None:intergenic
ACATTGCAGCTTGGTTTCTT+TGG 0.250558 8_2:-60054029 Msa1258780:CDS
TTACTTGTTGGTGATAGATT+TGG 0.257933 8_2:-60056358 Msa1258780:five_prime_UTR
TACTTGTTGGTGATAGATTT+GGG 0.286588 8_2:-60056357 Msa1258780:five_prime_UTR
CCTAGTTGCTGATTCCGTTT+TGG 0.319218 8_2:-60056071 Msa1258780:CDS
TGCTTGGTAAAGAGCATTCT+TGG 0.319346 8_2:+60052928 None:intergenic
GTAAAATATAAAGGTGTCAT+AGG 0.319394 8_2:+60053722 None:intergenic
GAAGGCGGCCACATTGTTCT+TGG 0.328664 8_2:-60053781 Msa1258780:CDS
GGATATGGATCGTGTCCTTT+TGG 0.338072 8_2:-60056050 Msa1258780:CDS
GCAACTAGGGTTTCGTATAA+AGG 0.342274 8_2:+60056085 None:intergenic
AAAGCATTGACAAAGCTAAA+AGG 0.352604 8_2:-60053983 Msa1258780:intron
TTGGTTGCTAAATTCATCTC+AGG 0.360907 8_2:-60052520 Msa1258780:three_prime_UTR
ATTTAGCAACCAAAGTTGTT+TGG 0.363336 8_2:+60052530 None:intergenic
TAAAGAGCATTCTTGGCATC+AGG 0.380008 8_2:+60052935 None:intergenic
AAGTCTTTCTTCTCAGCATT+TGG 0.381841 8_2:-60053454 Msa1258780:intron
CTTGAACATCTTGTTGTTTG+AGG 0.383548 8_2:+60056250 None:intergenic
CTGCCCAACTGCAACAGTCT+TGG 0.384938 8_2:+60054073 None:intergenic
CAAAACGGTGTAAAATATAA+AGG 0.388515 8_2:+60053713 None:intergenic
AAGGAGACTTCTTGTTGAAC+AGG 0.394711 8_2:-60052895 Msa1258780:CDS
TGTAAGATTGATAAAGTTGC+AGG 0.396057 8_2:-60052977 Msa1258780:CDS
TTTGCATCGCATCGCGTCAA+TGG 0.397473 8_2:-60056331 Msa1258780:exon
GAAGCCATGGCAAAAGCGTT+TGG 0.405490 8_2:-60053161 Msa1258780:CDS
TCAATCACTGTCAAGATCTC+AGG 0.407014 8_2:+60053529 None:intergenic
GTCTCGTGTGATCGATCTTT+AGG 0.409640 8_2:-60052861 Msa1258780:exon
CTTGTATTGACAACCATATA+AGG 0.412125 8_2:+60053474 None:intergenic
GCTATTTGCATCCACACTTC+CGG 0.415118 8_2:-60053253 Msa1258780:CDS
AAAACGACAAACTCAATCAT+AGG 0.416056 8_2:+60052593 None:intergenic
CTCCTTGCTTAATGGTTGCT+TGG 0.422700 8_2:+60052912 None:intergenic
TCATTAATTTGGAAATCAAA+TGG 0.426282 8_2:+60052723 None:intergenic
CAGAGTTTCCTTAAAACAAA+AGG 0.442207 8_2:-60053670 Msa1258780:intron
CCAACTTAATTTGCTCCGTC+AGG 0.445020 8_2:+60053279 None:intergenic
CAACTAGGGTTTCGTATAAA+GGG 0.448981 8_2:+60056086 None:intergenic
CCAAAACGGAATCAGCAACT+AGG 0.455755 8_2:+60056071 None:intergenic
GCAGCTTGGTTTCTTTGGCA+TGG 0.461721 8_2:-60054024 Msa1258780:CDS
TGTTTGAAGAAGGTGGTGAC+TGG 0.465631 8_2:-60053866 Msa1258780:CDS
TGTTATTATGCTGGTCAAAA+CGG 0.481534 8_2:+60053698 None:intergenic
AAGAAGGTGGTGACTGGGAA+AGG 0.487909 8_2:-60053860 Msa1258780:CDS
TGAAGTTCGTGAGGCTCACT+TGG 0.496675 8_2:-60054248 Msa1258780:CDS
TTTGAGGAGGAAAAGCTTGT+CGG 0.496982 8_2:+60056266 None:intergenic
TACATACCTTGTCCCCAATC+CGG 0.497684 8_2:+60054206 None:intergenic
TTTCATCCGGATTGGGGACA+AGG 0.498726 8_2:-60054212 Msa1258780:intron
TATGACAGCTTGTTTGAAGA+AGG 0.509351 8_2:-60053876 Msa1258780:intron
GTATTCTATACATTGCAGCT+TGG 0.510078 8_2:-60054038 Msa1258780:CDS
TGTTGCAGTTGGGCAGAAGA+TGG 0.511519 8_2:-60054066 Msa1258780:CDS
TTTGACCAGCATAATAACAT+TGG 0.511922 8_2:-60053694 Msa1258780:CDS
TTCAATTTCGTCAAGGAACA+TGG 0.512182 8_2:-60056195 Msa1258780:intron
TGATCTCTCTCATGTAATAC+CGG 0.514625 8_2:+60053234 None:intergenic
TCACCAACAAGTAAAAGTGC+TGG 0.515751 8_2:+60056367 None:intergenic
GCGTGATTTCCAAACAACTT+TGG 0.516055 8_2:-60052539 Msa1258780:three_prime_UTR
TCTGTCCAATGTTATTATGC+TGG 0.519046 8_2:+60053689 None:intergenic
GTGACTGGGAAAGGAAGAAT+AGG 0.520244 8_2:-60053851 Msa1258780:CDS
TTGAGATGATTCGATCAGCT+TGG 0.534191 8_2:+60052696 None:intergenic
TGTTATCTTGAGATGCTCCA+AGG 0.535770 8_2:+60054100 None:intergenic
AAACCAAGACTGTTGCAGTT+GGG 0.539841 8_2:-60054076 Msa1258780:CDS
GCTGATGCCGAGGAAAACTT+AGG 0.544982 8_2:-60054277 Msa1258780:CDS
TAAAATATAAAGGTGTCATA+GGG 0.545376 8_2:+60053723 None:intergenic
CAGAGATACCGACAGTATCA+AGG 0.545935 8_2:-60052802 Msa1258780:three_prime_UTR
GACACGATCCATATCCAAAA+CGG 0.546950 8_2:+60056057 None:intergenic
GAAACCAAGACTGTTGCAGT+TGG 0.547733 8_2:-60054077 Msa1258780:CDS
CCTGACGGAGCAAATTAAGT+TGG 0.551415 8_2:-60053279 Msa1258780:CDS
TAGCACGCATGGAGTCCAAA+AGG 0.551715 8_2:+60056035 None:intergenic
ATAGGTAGTAAAGGTTGAGA+TGG 0.554018 8_2:+60053755 None:intergenic
TATGCACCAGGAGAAAGCCT+TGG 0.557453 8_2:-60054117 Msa1258780:intron
TGGTTGCTAAATTCATCTCA+GGG 0.560742 8_2:-60052519 Msa1258780:three_prime_UTR
CACCAACAAGTAAAAGTGCT+GGG 0.563997 8_2:+60056368 None:intergenic
CAAAACGGAATCAGCAACTA+GGG 0.569243 8_2:+60056072 None:intergenic
GAGTGTGACAATTGAAGCCA+TGG 0.570854 8_2:-60053174 Msa1258780:CDS
ATCGCGTCAATGGCAAATGA+AGG 0.573429 8_2:-60056321 Msa1258780:exon
CTCATGTAATACCGGAAGTG+TGG 0.574056 8_2:+60053242 None:intergenic
ATTCATTTCAGCTGGCCTGA+CGG 0.578789 8_2:-60053294 Msa1258780:intron
AATAGGCTGAAAGTGTATGA+AGG 0.580095 8_2:-60053834 Msa1258780:CDS
GTGCTGGGCAAGACAAGTAT+CGG 0.580201 8_2:+60056383 None:intergenic
AAAGAGCATTCTTGGCATCA+GGG 0.589008 8_2:+60052936 None:intergenic
GAACATCTTGTTGTTTGAGG+AGG 0.589500 8_2:+60056253 None:intergenic
TACCAAGCAACCATTAAGCA+AGG 0.592283 8_2:-60052914 Msa1258780:CDS
GTTTGAAGAAGGTGGTGACT+GGG 0.592873 8_2:-60053865 Msa1258780:CDS
TTCGAGTGGACATGCAGTAG+AGG 0.594533 8_2:+60053811 None:intergenic
GCTGCAATGTATAGAATACC+AGG 0.602890 8_2:+60054042 None:intergenic
GGAGGAAAAGCTTGTCGGCG+AGG 0.605693 8_2:+60056271 None:intergenic
ATTGGGTTCGCTCGCCGCTG+AGG 0.607023 8_2:-60052561 Msa1258780:three_prime_UTR
CACTCGAAATTTCGAGAAGG+CGG 0.611108 8_2:-60053796 Msa1258780:CDS
CGCCTTCTCGAAATTTCGAG+TGG 0.620270 8_2:+60053797 None:intergenic
TTGTCGGCGAGGACAAGTTG+TGG 0.627071 8_2:+60056282 None:intergenic
ACAGATGTCCTTGATACTGT+CGG 0.642655 8_2:+60052794 None:intergenic
AAATTGTGGGCAAAGAAGAG+AGG 0.644772 8_2:+60052494 None:intergenic
AAAAGCGTTTGGAGTATCTG+TGG 0.655763 8_2:-60053150 Msa1258780:CDS
GGAAGTGTGGATGCAAATAG+CGG 0.661860 8_2:+60053255 None:intergenic
AGGTGAGAGTGAAGTTCGTG+AGG 0.662611 8_2:-60054257 Msa1258780:CDS
GTCCACTCGAAATTTCGAGA+AGG 0.663292 8_2:-60053799 Msa1258780:CDS
AGTTGGGCAGAAGATGGACC+TGG 0.674047 8_2:-60054060 Msa1258780:CDS
GACAGCTTGTTTGAAGAAGG+TGG 0.675197 8_2:-60053873 Msa1258780:intron
GTTTGGAAATCACGCCTCAG+CGG 0.691043 8_2:+60052547 None:intergenic
GAGCATTCTTGGCATCAGGG+CGG 0.729040 8_2:+60052939 None:intergenic
GATGGAATCCAAGAACAATG+TGG 0.760047 8_2:+60053773 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCAAATTATTTTTTTGAA+CGG - chr8_2:60056229-60056248 Msa1258780:CDS 10.0%
!! TCAATAAATACATATCTTAA+TGG - chr8_2:60053938-60053957 Msa1258780:intron 15.0%
!!! TATAATTTTCTGTTAAGAAT+GGG - chr8_2:60054979-60054998 Msa1258780:intron 15.0%
!!! TACACTTTTTAAACATAAAA+TGG + chr8_2:60056063-60056082 None:intergenic 15.0%
!! TGAAAAACAAAAGCAAATTA+GGG + chr8_2:60052782-60052801 None:intergenic 20.0%
!! AAAATCCAAAATTCACAATT+GGG + chr8_2:60052956-60052975 None:intergenic 20.0%
!! TTGAAGAAAATTTGTATAGT+AGG - chr8_2:60052993-60053012 Msa1258780:CDS 20.0%
!! TGAAGAAAATTTGTATAGTA+GGG - chr8_2:60052994-60053013 Msa1258780:CDS 20.0%
!! TTGAATTGTACTAATGTATT+TGG - chr8_2:60053066-60053085 Msa1258780:intron 20.0%
!! CAATATGTAAAAATAAACTC+TGG + chr8_2:60053564-60053583 None:intergenic 20.0%
!!! ACAACTTATTCATCATTTTT+AGG + chr8_2:60053814-60053833 None:intergenic 20.0%
!! TATATCCTAGAAAGATTAAT+GGG + chr8_2:60054351-60054370 None:intergenic 20.0%
!! ATATATCCTAGAAAGATTAA+TGG + chr8_2:60054352-60054371 None:intergenic 20.0%
!! TTAACAGAAAATTATAGCAA+AGG + chr8_2:60054975-60054994 None:intergenic 20.0%
!!! CTATAATTTTCTGTTAAGAA+TGG - chr8_2:60054978-60054997 Msa1258780:intron 20.0%
!!! TAAAATATAAAGGTGTCATA+GGG + chr8_2:60055178-60055197 None:intergenic 20.0%
!! ATTACATATATTTGTTTCCA+GGG - chr8_2:60055863-60055882 Msa1258780:intron 20.0%
!!! TCATTAATTTGGAAATCAAA+TGG + chr8_2:60056178-60056197 None:intergenic 20.0%
! ATGTAGAGTGAAGAAAATTA+GGG + chr8_2:60052756-60052775 None:intergenic 25.0%
! TATGTAGAGTGAAGAAAATT+AGG + chr8_2:60052757-60052776 None:intergenic 25.0%
! GTGAAAAACAAAAGCAAATT+AGG + chr8_2:60052783-60052802 None:intergenic 25.0%
! AAATCCAAAATTCACAATTG+GGG + chr8_2:60052955-60052974 None:intergenic 25.0%
! CAAAATCCAAAATTCACAAT+TGG + chr8_2:60052957-60052976 None:intergenic 25.0%
!! TTTGTTCCTAAATGTTTTAC+TGG - chr8_2:60053100-60053119 Msa1258780:intron 25.0%
! CAAAAACCAGTAAAACATTT+AGG + chr8_2:60053109-60053128 None:intergenic 25.0%
!! ATTCTAGAGATTCTTGAATA+GGG + chr8_2:60053324-60053343 None:intergenic 25.0%
!! AATTCTAGAGATTCTTGAAT+AGG + chr8_2:60053325-60053344 None:intergenic 25.0%
!!! TATTTTTACATATTGTGACC+TGG - chr8_2:60053569-60053588 Msa1258780:intron 25.0%
!!! ACTATAAGCTTAGTTCTATA+TGG + chr8_2:60053866-60053885 None:intergenic 25.0%
! TATAGAACTAAGCTTATAGT+TGG - chr8_2:60053866-60053885 Msa1258780:CDS 25.0%
! TTAAACAACCAAGAAAGAAA+AGG - chr8_2:60053914-60053933 Msa1258780:intron 25.0%
!! TTATTGATCCTTTTCTTTCT+TGG + chr8_2:60053925-60053944 None:intergenic 25.0%
! TTTACATGATGCTATATCAT+TGG + chr8_2:60053966-60053985 None:intergenic 25.0%
!! AAATAATAGTTTGTATCTCG+AGG + chr8_2:60054536-60054555 None:intergenic 25.0%
!! TCATATGAATGTCTCATTTT+AGG - chr8_2:60054595-60054614 Msa1258780:intron 25.0%
!!! CAAAATCCTTATTTTTCATC+CGG - chr8_2:60054673-60054692 Msa1258780:intron 25.0%
! AAAAAGTTCATAGGTAGTAA+AGG + chr8_2:60055155-60055174 None:intergenic 25.0%
!!! GTAAAATATAAAGGTGTCAT+AGG + chr8_2:60055179-60055198 None:intergenic 25.0%
! CAAAACGGTGTAAAATATAA+AGG + chr8_2:60055188-60055207 None:intergenic 25.0%
!!! TAGAAGTACCTTTTGTTTTA+AGG + chr8_2:60055239-60055258 None:intergenic 25.0%
! AGAAAAGATAAATGGTGTAA+AGG + chr8_2:60055278-60055297 None:intergenic 25.0%
! CGGTTAAAAGAAAAGATAAA+TGG + chr8_2:60055286-60055305 None:intergenic 25.0%
!!! ATTTTGAAATTCATTTCAGC+TGG - chr8_2:60055596-60055615 Msa1258780:intron 25.0%
! TTGATTAGATTACAATGTTG+TGG - chr8_2:60055830-60055849 Msa1258780:intron 25.0%
! TGATTAGATTACAATGTTGT+GGG - chr8_2:60055831-60055850 Msa1258780:intron 25.0%
! CATTACATATATTTGTTTCC+AGG - chr8_2:60055862-60055881 Msa1258780:intron 25.0%
!! AAAAAGTGTATTGCATTGAA+AGG - chr8_2:60056073-60056092 Msa1258780:CDS 25.0%
!!! TGTCGTTTTTGTTTTATCAT+TGG - chr8_2:60056319-60056338 Msa1258780:exon 25.0%
!!! GTCGTTTTTGTTTTATCATT+GGG - chr8_2:60056320-60056339 Msa1258780:exon 25.0%
!! TTACTTGTTGGTGATAGATT+TGG - chr8_2:60052540-60052559 Msa1258780:three_prime_UTR 30.0%
!! TACTTGTTGGTGATAGATTT+GGG - chr8_2:60052541-60052560 Msa1258780:three_prime_UTR 30.0%
! AGATGTTTTCAATTTCGTCA+AGG - chr8_2:60052696-60052715 Msa1258780:three_prime_UTR 30.0%
GTGAAGAAAATTAGGGTTTA+CGG + chr8_2:60052749-60052768 None:intergenic 30.0%
! TTAACCCCAATTGTGAATTT+TGG - chr8_2:60052948-60052967 Msa1258780:CDS 30.0%
! TTTTGGATTTTGAATGCACT+AGG - chr8_2:60052965-60052984 Msa1258780:CDS 30.0%
AAATCGACATATGATCTGAA+TGG + chr8_2:60053415-60053434 None:intergenic 30.0%
TGAGTATAATGAGTCTTTGT+TGG - chr8_2:60053455-60053474 Msa1258780:CDS 30.0%
GAGTATAATGAGTCTTTGTT+GGG - chr8_2:60053456-60053475 Msa1258780:CDS 30.0%
AGTATAATGAGTCTTTGTTG+GGG - chr8_2:60053457-60053476 Msa1258780:CDS 30.0%
! ACTGTTTCTTTCCTTGATTA+TGG + chr8_2:60053759-60053778 None:intergenic 30.0%
! ATCAAGGAAAGAAACAGTTT+TGG - chr8_2:60053761-60053780 Msa1258780:CDS 30.0%
!! CTTAGTTCTATATGGATGTA+TGG + chr8_2:60053858-60053877 None:intergenic 30.0%
! CAGAGTGAAAATGAAAGTTT+TGG + chr8_2:60054104-60054123 None:intergenic 30.0%
! CAAAACTTTCATTTTCACTC+TGG - chr8_2:60054102-60054121 Msa1258780:CDS 30.0%
!! TAGAATCACTTTTGAAGATG+TGG + chr8_2:60054258-60054277 None:intergenic 30.0%
ATAGGCTAAATTTCATCCAT+CGG + chr8_2:60054308-60054327 None:intergenic 30.0%
TCTTACCCATTAATCTTTCT+AGG - chr8_2:60054343-60054362 Msa1258780:intron 30.0%
AAGTACAAAACCTAGAATAC+TGG - chr8_2:60054444-60054463 Msa1258780:intron 30.0%
AGTACAAAACCTAGAATACT+GGG - chr8_2:60054445-60054464 Msa1258780:intron 30.0%
TGCAATTAATATGACACATC+TGG + chr8_2:60054495-60054514 None:intergenic 30.0%
TATGAACTATCGTTAGTACA+AGG + chr8_2:60054580-60054599 None:intergenic 30.0%
!!! TTTAGCTTTGTCAATGCTTT+TGG + chr8_2:60054915-60054934 None:intergenic 30.0%
!! AAAGCATTGACAAAGCTAAA+AGG - chr8_2:60054915-60054934 Msa1258780:intron 30.0%
TGTTATTATGCTGGTCAAAA+CGG + chr8_2:60055203-60055222 None:intergenic 30.0%
TTTGACCAGCATAATAACAT+TGG - chr8_2:60055204-60055223 Msa1258780:intron 30.0%
CAGAGTTTCCTTAAAACAAA+AGG - chr8_2:60055228-60055247 Msa1258780:intron 30.0%
ACCAAGAAATAACAGAACAA+CGG + chr8_2:60055306-60055325 None:intergenic 30.0%
! TTAACTGACTAATTTGCATC+AGG - chr8_2:60055335-60055354 Msa1258780:intron 30.0%
! TCCACATCTTAAAGAGTTTT+TGG - chr8_2:60055398-60055417 Msa1258780:intron 30.0%
!! TCCAAAAACTCTTTAAGATG+TGG + chr8_2:60055402-60055421 None:intergenic 30.0%
! CTTGTATTGACAACCATATA+AGG + chr8_2:60055427-60055446 None:intergenic 30.0%
GAACATAGAAGCAAAAAGAT+AGG + chr8_2:60055563-60055582 None:intergenic 30.0%
!! TGTCATTTATTCCCAGTTTT+TGG - chr8_2:60055691-60055710 Msa1258780:intron 30.0%
CTTGTAAGATTCCAAAAACT+GGG + chr8_2:60055705-60055724 None:intergenic 30.0%
TCTTGTAAGATTCCAAAAAC+TGG + chr8_2:60055706-60055725 None:intergenic 30.0%
AACGAAAAACCAAGTGATTT+GGG + chr8_2:60055801-60055820 None:intergenic 30.0%
AAACGAAAAACCAAGTGATT+TGG + chr8_2:60055802-60055821 None:intergenic 30.0%
TGTAAGATTGATAAAGTTGC+AGG - chr8_2:60055921-60055940 Msa1258780:intron 30.0%
! TCTGTTGAATGCATTTTACT+AGG - chr8_2:60056122-60056141 Msa1258780:intron 30.0%
! TTGAATGCATTTTACTAGGT+GGG - chr8_2:60056126-60056145 Msa1258780:intron 30.0%
AGCTTGGATGTTCATTAATT+TGG + chr8_2:60056189-60056208 None:intergenic 30.0%
AAAACGACAAACTCAATCAT+AGG + chr8_2:60056308-60056327 None:intergenic 30.0%
ATTTAGCAACCAAAGTTGTT+TGG + chr8_2:60056371-60056390 None:intergenic 30.0%
!! CTTGAACATCTTGTTGTTTG+AGG + chr8_2:60052651-60052670 None:intergenic 35.0%
TTCAATTTCGTCAAGGAACA+TGG - chr8_2:60052703-60052722 Msa1258780:three_prime_UTR 35.0%
!!! GCTTTTGTTTTTCACAGACA+TGG - chr8_2:60052788-60052807 Msa1258780:three_prime_UTR 35.0%
CAACTAGGGTTTCGTATAAA+GGG + chr8_2:60052815-60052834 None:intergenic 35.0%
!! ATCATCAATTTTAGCACGCA+TGG + chr8_2:60052877-60052896 None:intergenic 35.0%
! TCCTGCTAAAGAAGTATGTT+TGG - chr8_2:60053279-60053298 Msa1258780:CDS 35.0%
TCCAAACATACTTCTTTAGC+AGG + chr8_2:60053283-60053302 None:intergenic 35.0%
ACTTCAATCAAACTGCTAGA+GGG + chr8_2:60053357-60053376 None:intergenic 35.0%
AACTTCAATCAAACTGCTAG+AGG + chr8_2:60053358-60053377 None:intergenic 35.0%
GCAGTTTGATTGAAGTTGAA+TGG - chr8_2:60053361-60053380 Msa1258780:intron 35.0%
GTATAATGAGTCTTTGTTGG+GGG - chr8_2:60053458-60053477 Msa1258780:CDS 35.0%
AAAAACCCCAGAATAAGCAA+GGG + chr8_2:60053598-60053617 None:intergenic 35.0%
TATATACCCAATGTCACCAA+TGG - chr8_2:60053667-60053686 Msa1258780:intron 35.0%
!!! TGTTTTGAGGCTAGCTATTA+TGG + chr8_2:60053704-60053723 None:intergenic 35.0%
CATGGAAATCACCATAATCA+AGG - chr8_2:60053745-60053764 Msa1258780:CDS 35.0%
AGAACTAAGCTTATAGTTGG+AGG - chr8_2:60053869-60053888 Msa1258780:CDS 35.0%
! ATTTTCATCTGTCAGCTCAA+AGG + chr8_2:60054068-60054087 None:intergenic 35.0%
AAATAGCAAAGCAACGAAGA+GGG + chr8_2:60054218-60054237 None:intergenic 35.0%
TAGGCTAAATTTCATCCATC+GGG + chr8_2:60054307-60054326 None:intergenic 35.0%
TGAAATTTAGCCTATCTCTG+CGG - chr8_2:60054313-60054332 Msa1258780:intron 35.0%
AGAATAATAACCGCAGAGAT+AGG + chr8_2:60054326-60054345 None:intergenic 35.0%
CAGTGAAAAGATTACAACTC+AGG - chr8_2:60054415-60054434 Msa1258780:intron 35.0%
TTCTATTCTCCCAGTATTCT+AGG + chr8_2:60054457-60054476 None:intergenic 35.0%
TGGGAGAATAGAAAATGCAA+AGG - chr8_2:60054464-60054483 Msa1258780:intron 35.0%
AGAATAGAAAATGCAAAGGC+TGG - chr8_2:60054468-60054487 Msa1258780:intron 35.0%
!!! TCCTTATTTTTCATCCGGAT+TGG - chr8_2:60054678-60054697 Msa1258780:intron 35.0%
!!! CCTTATTTTTCATCCGGATT+GGG - chr8_2:60054679-60054698 Msa1258780:intron 35.0%
!! CTTATTTTTCATCCGGATTG+GGG - chr8_2:60054680-60054699 Msa1258780:intron 35.0%
GTATTCTATACATTGCAGCT+TGG - chr8_2:60054860-60054879 Msa1258780:intron 35.0%
TCTTCAAACAAGCTGTCATA+TGG + chr8_2:60055022-60055041 None:intergenic 35.0%
! TATGACAGCTTGTTTGAAGA+AGG - chr8_2:60055022-60055041 Msa1258780:intron 35.0%
! AATAGGCTGAAAGTGTATGA+AGG - chr8_2:60055064-60055083 Msa1258780:intron 35.0%
ATAGGTAGTAAAGGTTGAGA+TGG + chr8_2:60055146-60055165 None:intergenic 35.0%
GTCATAGGGAAAAAGTTCAT+AGG + chr8_2:60055164-60055183 None:intergenic 35.0%
TCTGTCCAATGTTATTATGC+TGG + chr8_2:60055212-60055231 None:intergenic 35.0%
!! ACCGTTGTTCTGTTATTTCT+TGG - chr8_2:60055302-60055321 Msa1258780:intron 35.0%
!! GAGTTTTTGGACTCCTTATA+TGG - chr8_2:60055411-60055430 Msa1258780:intron 35.0%
AAGTCTTTCTTCTCAGCATT+TGG - chr8_2:60055444-60055463 Msa1258780:intron 35.0%
TGATCTCTCTCATGTAATAC+CGG + chr8_2:60055667-60055686 None:intergenic 35.0%
TTAGATTACAATGTTGTGGG+AGG - chr8_2:60055834-60055853 Msa1258780:intron 35.0%
! GTTGAATGCATTTTACTAGG+TGG - chr8_2:60056125-60056144 Msa1258780:intron 35.0%
! TGAATGCATTTTACTAGGTG+GGG - chr8_2:60056127-60056146 Msa1258780:intron 35.0%
TTGGTTGCTAAATTCATCTC+AGG - chr8_2:60056378-60056397 Msa1258780:five_prime_UTR 35.0%
TGGTTGCTAAATTCATCTCA+GGG - chr8_2:60056379-60056398 Msa1258780:five_prime_UTR 35.0%
!! CACCAACAAGTAAAAGTGCT+GGG + chr8_2:60052533-60052552 None:intergenic 40.0%
! TCACCAACAAGTAAAAGTGC+TGG + chr8_2:60052534-60052553 None:intergenic 40.0%
TTTGAGGAGGAAAAGCTTGT+CGG + chr8_2:60052635-60052654 None:intergenic 40.0%
!! GAACATCTTGTTGTTTGAGG+AGG + chr8_2:60052648-60052667 None:intergenic 40.0%
GCAACTAGGGTTTCGTATAA+AGG + chr8_2:60052816-60052835 None:intergenic 40.0%
CAAAACGGAATCAGCAACTA+GGG + chr8_2:60052829-60052848 None:intergenic 40.0%
!!! TGCTGATTCCGTTTTGGATA+TGG - chr8_2:60052833-60052852 Msa1258780:three_prime_UTR 40.0%
GACACGATCCATATCCAAAA+CGG + chr8_2:60052844-60052863 None:intergenic 40.0%
ATTCTTGAATAGGGAACACG+TGG + chr8_2:60053315-60053334 None:intergenic 40.0%
TTCAATCAAACTGCTAGAGG+GGG + chr8_2:60053355-60053374 None:intergenic 40.0%
CTTCAATCAAACTGCTAGAG+GGG + chr8_2:60053356-60053375 None:intergenic 40.0%
GAAAAACCCCAGAATAAGCA+AGG + chr8_2:60053599-60053618 None:intergenic 40.0%
! CATAAGCCATTGGTGACATT+GGG + chr8_2:60053676-60053695 None:intergenic 40.0%
CAATGTCACCAATGGCTTAT+GGG - chr8_2:60053675-60053694 Msa1258780:CDS 40.0%
! TTTGAGGCTAGCTATTATGG+TGG + chr8_2:60053701-60053720 None:intergenic 40.0%
CATGACATCTACCATTCACT+GGG + chr8_2:60053729-60053748 None:intergenic 40.0%
! CAAAGGCTGGTGATTTTTCA+GGG + chr8_2:60054051-60054070 None:intergenic 40.0%
! TCAAAGGCTGGTGATTTTTC+AGG + chr8_2:60054052-60054071 None:intergenic 40.0%
CAAATAGCAAAGCAACGAAG+AGG + chr8_2:60054219-60054238 None:intergenic 40.0%
!! CTCTTCGTTGCTTTGCTATT+TGG - chr8_2:60054217-60054236 Msa1258780:CDS 40.0%
! ACTCTCACCTAAGTTTTCCT+CGG + chr8_2:60054631-60054650 None:intergenic 40.0%
CCCAATCCGGATGAAAAATA+AGG + chr8_2:60054682-60054701 None:intergenic 40.0%
! TTTCTTTTCCTTTCTGCTGC+TGG - chr8_2:60054737-60054756 Msa1258780:intron 40.0%
TGTTATCTTGAGATGCTCCA+AGG + chr8_2:60054801-60054820 None:intergenic 40.0%
AAACCAAGACTGTTGCAGTT+GGG - chr8_2:60054822-60054841 Msa1258780:intron 40.0%
GCTGCAATGTATAGAATACC+AGG + chr8_2:60054859-60054878 None:intergenic 40.0%
ACATTGCAGCTTGGTTTCTT+TGG - chr8_2:60054869-60054888 Msa1258780:intron 40.0%
GATGGAATCCAAGAACAATG+TGG + chr8_2:60055128-60055147 None:intergenic 40.0%
! GACTAATTTGCATCAGGTAG+TGG - chr8_2:60055341-60055360 Msa1258780:intron 40.0%
TCAATCACTGTCAAGATCTC+AGG + chr8_2:60055372-60055391 None:intergenic 40.0%
!! AAAAGCGTTTGGAGTATCTG+TGG - chr8_2:60055748-60055767 Msa1258780:intron 40.0%
TGAATGCATCCCAAATCACT+TGG - chr8_2:60055789-60055808 Msa1258780:intron 40.0%
! TATCACGTTTTATCGCAGCT+GGG - chr8_2:60055889-60055908 Msa1258780:intron 40.0%
!! AAAGAGCATTCTTGGCATCA+GGG + chr8_2:60055965-60055984 None:intergenic 40.0%
!! TAAAGAGCATTCTTGGCATC+AGG + chr8_2:60055966-60055985 None:intergenic 40.0%
!! TGCTTGGTAAAGAGCATTCT+TGG + chr8_2:60055973-60055992 None:intergenic 40.0%
TACCAAGCAACCATTAAGCA+AGG - chr8_2:60055984-60056003 Msa1258780:intron 40.0%
CAAGAAGTCTCCTTGCTTAA+TGG + chr8_2:60055997-60056016 None:intergenic 40.0%
AAGGAGACTTCTTGTTGAAC+AGG - chr8_2:60056003-60056022 Msa1258780:CDS 40.0%
ACAGATGTCCTTGATACTGT+CGG + chr8_2:60056107-60056126 None:intergenic 40.0%
! GAATGCATTTTACTAGGTGG+GGG - chr8_2:60056128-60056147 Msa1258780:intron 40.0%
TTGAGATGATTCGATCAGCT+TGG + chr8_2:60056205-60056224 None:intergenic 40.0%
GCGTGATTTCCAAACAACTT+TGG - chr8_2:60056359-60056378 Msa1258780:five_prime_UTR 40.0%
! TGCCCAGCACTTTTACTTGT+TGG - chr8_2:60052528-60052547 Msa1258780:three_prime_UTR 45.0%
ATCGCGTCAATGGCAAATGA+AGG - chr8_2:60052577-60052596 Msa1258780:three_prime_UTR 45.0%
CCAAAACGGAATCAGCAACT+AGG + chr8_2:60052830-60052849 None:intergenic 45.0%
!!! CCTAGTTGCTGATTCCGTTT+TGG - chr8_2:60052827-60052846 Msa1258780:three_prime_UTR 45.0%
! GGATATGGATCGTGTCCTTT+TGG - chr8_2:60052848-60052867 Msa1258780:exon 45.0%
TGGTCACCCTTGCTTATTCT+GGG - chr8_2:60053589-60053608 Msa1258780:intron 45.0%
! CCATAAGCCATTGGTGACAT+TGG + chr8_2:60053677-60053696 None:intergenic 45.0%
CCAATGTCACCAATGGCTTA+TGG - chr8_2:60053674-60053693 Msa1258780:CDS 45.0%
! CATTCACTGGGCATGTTTTG+AGG + chr8_2:60053717-60053736 None:intergenic 45.0%
CTCAAAACATGCCCAGTGAA+TGG - chr8_2:60053715-60053734 Msa1258780:CDS 45.0%
CCATGACATCTACCATTCAC+TGG + chr8_2:60053730-60053749 None:intergenic 45.0%
CCAGTGAATGGTAGATGTCA+TGG - chr8_2:60053727-60053746 Msa1258780:CDS 45.0%
!!! GGTGATTTTTCAGGGCACAA+CGG + chr8_2:60054043-60054062 None:intergenic 45.0%
! CATTTTCACTCTGGCAGAGA+AGG - chr8_2:60054111-60054130 Msa1258780:intron 45.0%
! AGTGAGGTGGACATTGACTA+TGG + chr8_2:60054147-60054166 None:intergenic 45.0%
ACTGTAGGACATCTTCAGTC+TGG + chr8_2:60054192-60054211 None:intergenic 45.0%
CCATCGGGAATTCTAAGTTC+AGG + chr8_2:60054292-60054311 None:intergenic 45.0%
CCTGAACTTAGAATTCCCGA+TGG - chr8_2:60054289-60054308 Msa1258780:intron 45.0%
!!! TTTTAGGATTGCTGATGCCG+AGG - chr8_2:60054611-60054630 Msa1258780:intron 45.0%
TACATACCTTGTCCCCAATC+CGG + chr8_2:60054695-60054714 None:intergenic 45.0%
ACTTGATTCCAGCAGCAGAA+AGG + chr8_2:60054748-60054767 None:intergenic 45.0%
GAAACCAAGACTGTTGCAGT+TGG - chr8_2:60054821-60054840 Msa1258780:intron 45.0%
! GACAGCTTGTTTGAAGAAGG+TGG - chr8_2:60055025-60055044 Msa1258780:intron 45.0%
TGTTTGAAGAAGGTGGTGAC+TGG - chr8_2:60055032-60055051 Msa1258780:intron 45.0%
GTTTGAAGAAGGTGGTGACT+GGG - chr8_2:60055033-60055052 Msa1258780:intron 45.0%
GTGACTGGGAAAGGAAGAAT+AGG - chr8_2:60055047-60055066 Msa1258780:intron 45.0%
GTCCACTCGAAATTTCGAGA+AGG - chr8_2:60055099-60055118 Msa1258780:intron 45.0%
CACTCGAAATTTCGAGAAGG+CGG - chr8_2:60055102-60055121 Msa1258780:intron 45.0%
! ATTCATTTCAGCTGGCCTGA+CGG - chr8_2:60055604-60055623 Msa1258780:intron 45.0%
!! CCAACTTAATTTGCTCCGTC+AGG + chr8_2:60055622-60055641 None:intergenic 45.0%
CCTGACGGAGCAAATTAAGT+TGG - chr8_2:60055619-60055638 Msa1258780:intron 45.0%
! GGAAGTGTGGATGCAAATAG+CGG + chr8_2:60055646-60055665 None:intergenic 45.0%
GCTATTTGCATCCACACTTC+CGG - chr8_2:60055645-60055664 Msa1258780:intron 45.0%
CTCATGTAATACCGGAAGTG+TGG + chr8_2:60055659-60055678 None:intergenic 45.0%
GAGTGTGACAATTGAAGCCA+TGG - chr8_2:60055724-60055743 Msa1258780:intron 45.0%
! TACTCCAAACGCTTTTGCCA+TGG + chr8_2:60055744-60055763 None:intergenic 45.0%
GATAAAACGTGATAGCTCCC+TGG + chr8_2:60055883-60055902 None:intergenic 45.0%
! CTATCACGTTTTATCGCAGC+TGG - chr8_2:60055888-60055907 Msa1258780:intron 45.0%
CTCCTTGCTTAATGGTTGCT+TGG + chr8_2:60055989-60056008 None:intergenic 45.0%
GTCTCGTGTGATCGATCTTT+AGG - chr8_2:60056037-60056056 Msa1258780:CDS 45.0%
CAGAGATACCGACAGTATCA+AGG - chr8_2:60056096-60056115 Msa1258780:CDS 45.0%
! TTTTACTAGGTGGGGGAATG+AGG - chr8_2:60056135-60056154 Msa1258780:intron 45.0%
GTGCTGGGCAAGACAAGTAT+CGG + chr8_2:60052518-60052537 None:intergenic 50.0%
TTTGCATCGCATCGCGTCAA+TGG - chr8_2:60052567-60052586 Msa1258780:three_prime_UTR 50.0%
GGGTTTACGGAGAGAGAAGA+GGG + chr8_2:60052736-60052755 None:intergenic 50.0%
AGGGTTTACGGAGAGAGAAG+AGG + chr8_2:60052737-60052756 None:intergenic 50.0%
TAGCACGCATGGAGTCCAAA+AGG + chr8_2:60052866-60052885 None:intergenic 50.0%
CAGAATAAGCAAGGGTGACC+AGG + chr8_2:60053590-60053609 None:intergenic 50.0%
CTGGTCACCCTTGCTTATTC+TGG - chr8_2:60053588-60053607 Msa1258780:intron 50.0%
GGTCACCCTTGCTTATTCTG+GGG - chr8_2:60053590-60053609 Msa1258780:intron 50.0%
TATGGTGGCCCATAAGCCAT+TGG + chr8_2:60053686-60053705 None:intergenic 50.0%
TCATCTGTCAGCTCAAAGGC+TGG + chr8_2:60054064-60054083 None:intergenic 50.0%
GTCAATGTCCACCTCACTTG+AGG - chr8_2:60054149-60054168 Msa1258780:intron 50.0%
AATGTCCACCTCACTTGAGG+AGG - chr8_2:60054152-60054171 Msa1258780:intron 50.0%
CAACGAAGAGGGTTCACTGT+AGG + chr8_2:60054207-60054226 None:intergenic 50.0%
GCTGATGCCGAGGAAAACTT+AGG - chr8_2:60054621-60054640 Msa1258780:intron 50.0%
AGGTGAGAGTGAAGTTCGTG+AGG - chr8_2:60054641-60054660 Msa1258780:intron 50.0%
TGAAGTTCGTGAGGCTCACT+TGG - chr8_2:60054650-60054669 Msa1258780:intron 50.0%
! TTTCATCCGGATTGGGGACA+AGG - chr8_2:60054686-60054705 Msa1258780:intron 50.0%
AACACTGTCCTCTATGCACC+AGG - chr8_2:60054769-60054788 Msa1258780:intron 50.0%
TATGCACCAGGAGAAAGCCT+TGG - chr8_2:60054781-60054800 Msa1258780:intron 50.0%
TGTTGCAGTTGGGCAGAAGA+TGG - chr8_2:60054832-60054851 Msa1258780:intron 50.0%
GCAGCTTGGTTTCTTTGGCA+TGG - chr8_2:60054874-60054893 Msa1258780:intron 50.0%
AAGAAGGTGGTGACTGGGAA+AGG - chr8_2:60055038-60055057 Msa1258780:intron 50.0%
TTCGAGTGGACATGCAGTAG+AGG + chr8_2:60055090-60055109 None:intergenic 50.0%
CGCCTTCTCGAAATTTCGAG+TGG + chr8_2:60055104-60055123 None:intergenic 50.0%
!! GAAGCCATGGCAAAAGCGTT+TGG - chr8_2:60055737-60055756 Msa1258780:intron 50.0%
CGATCACACGAGACAGTTTC+TGG + chr8_2:60056031-60056050 None:intergenic 50.0%
GTTTGGAAATCACGCCTCAG+CGG + chr8_2:60056354-60056373 None:intergenic 50.0%
TTGTCGGCGAGGACAAGTTG+TGG + chr8_2:60052619-60052638 None:intergenic 55.0%
CATTGCAGCCTCCTCAAGTG+AGG + chr8_2:60054163-60054182 None:intergenic 55.0%
GGCTTTCTCCTGGTGCATAG+AGG + chr8_2:60054780-60054799 None:intergenic 55.0%
GATGCTCCAAGGCTTTCTCC+TGG + chr8_2:60054790-60054809 None:intergenic 55.0%
CTGCCCAACTGCAACAGTCT+TGG + chr8_2:60054828-60054847 None:intergenic 55.0%
AGTTGGGCAGAAGATGGACC+TGG - chr8_2:60054838-60054857 Msa1258780:intron 55.0%
GAAGGCGGCCACATTGTTCT+TGG - chr8_2:60055117-60055136 Msa1258780:intron 55.0%
GAGCATTCTTGGCATCAGGG+CGG + chr8_2:60055962-60055981 None:intergenic 55.0%
GGAGGAAAAGCTTGTCGGCG+AGG + chr8_2:60052630-60052649 None:intergenic 60.0%
TGCAGCCTCCTCAAGTGAGG+TGG + chr8_2:60054160-60054179 None:intergenic 60.0%
ATTGGGTTCGCTCGCCGCTG+AGG - chr8_2:60056337-60056356 Msa1258780:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 60052503 60056417 60052503 ID=Msa1258780;Name=Msa1258780
chr8_2 mRNA 60052503 60056417 60052503 ID=Msa1258780-mRNA-1;Parent=Msa1258780;Name=Msa1258780-mRNA-1;_AED=0.08;_eAED=0.08;_QI=83|1|1|1|1|1|8|359|387
chr8_2 exon 60052503 60053036 60052503 ID=Msa1258780-mRNA-1:exon:18832;Parent=Msa1258780-mRNA-1
chr8_2 exon 60053137 60053305 60053137 ID=Msa1258780-mRNA-1:exon:18831;Parent=Msa1258780-mRNA-1
chr8_2 exon 60053455 60053563 60053455 ID=Msa1258780-mRNA-1:exon:18830;Parent=Msa1258780-mRNA-1
chr8_2 exon 60053671 60053890 60053671 ID=Msa1258780-mRNA-1:exon:18829;Parent=Msa1258780-mRNA-1
chr8_2 exon 60053984 60054129 60053984 ID=Msa1258780-mRNA-1:exon:18828;Parent=Msa1258780-mRNA-1
chr8_2 exon 60054213 60054303 60054213 ID=Msa1258780-mRNA-1:exon:18827;Parent=Msa1258780-mRNA-1
chr8_2 exon 60056001 60056115 60056001 ID=Msa1258780-mRNA-1:exon:18826;Parent=Msa1258780-mRNA-1
chr8_2 exon 60056196 60056417 60056196 ID=Msa1258780-mRNA-1:exon:18825;Parent=Msa1258780-mRNA-1
chr8_2 five_prime_UTR 60056335 60056417 60056335 ID=Msa1258780-mRNA-1:five_prime_utr;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60056196 60056334 60056196 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60056001 60056115 60056001 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60054213 60054303 60054213 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60053984 60054129 60053984 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60053671 60053890 60053671 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60053455 60053563 60053455 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60053137 60053305 60053137 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 CDS 60052862 60053036 60052862 ID=Msa1258780-mRNA-1:cds;Parent=Msa1258780-mRNA-1
chr8_2 three_prime_UTR 60052503 60052861 60052503 ID=Msa1258780-mRNA-1:three_prime_utr;Parent=Msa1258780-mRNA-1
Gene Sequence

>Msa1258780

ATGGCAAATGAAGGTGAAGAAGTTCAGCAGCCACAACTTGTCCTCGCCGACAAGCTTTTCCTCCTCAAACAACAAGATGTTCAAGACATCGACAAAGTTCGATTCAAAGAAGATGTTTTCAATTTCGTCAAGGAACATGACATGGTCCCTTTATACGAAACCCTAGTTGCTGATTCCGTTTTGGATATGGATCGTGTCCTTTTGGACTCCATGCGTGCTAAAATTGATGATGAGCTCAAGAAGCTTGATGAAAAGATTGCTGATGCCGAGGAAAACTTAGGTGAGAGTGAAGTTCGTGAGGCTCACTTGGCAAAATCCTTATTTTTCATCCGGATTGGGGACAAGGAGAAAGCCTTGGAGCATCTCAAGATAACAGAAACCAAGACTGTTGCAGTTGGGCAGAAGATGGACCTGGTATTCTATACATTGCAGCTTGGTTTCTTTGGCATGGATTTCGATCTCATTTCCAAAAGCATTGACAAAGCTAAAAGCTTGTTTGAAGAAGGTGGTGACTGGGAAAGGAAGAATAGGCTGAAAGTGTATGAAGGCCTCTACTGCATGTCCACTCGAAATTTCGAGAAGGCGGCCACATTGTTCTTGGATTCCATCTCAACCTTTACTACCTATGAACTTTTTCCCTATGACACCTTTATATTTTACACCGTTTTGACCAGCATAATAACATTGGACAGAGTTTCCTTAAAACAAAAGGTAGTGGATGCTCCTGAGATCTTGACAGTGATTGAAAAAATTCCACATCTTAAAGAGTTTTTGGACTCCTTATATGGTTGTCAATACAAGTCTTTCTTCTCAGCATTTGCTGGCCTGACGGAGCAAATTAAGTTGGACCGCTATTTGCATCCACACTTCCGGTATTACATGAGAGAGATCAGAACTGTCATTTATTCCCAGTTTTTGGAATCTTACAAGAGTGTGACAATTGAAGCCATGGCAAAAGCGTTTGGAGTATCTGTGGATTTTATTGATGTGGAGCTATCACGTTTTATCGCAGCTGGGAAACTTCACTGTAAGATTGATAAAGTTGCAGGTGTTCTTGAAACTAACCGCCCTGATGCCAAGAATGCTCTTTACCAAGCAACCATTAAGCAAGGAGACTTCTTGTTGAACAGGATCCAGAAACTGTCTCGTGTGATCGATCTTTAG

Protein sequence

>Msa1258780

MANEGEEVQQPQLVLADKLFLLKQQDVQDIDKVRFKEDVFNFVKEHDMVPLYETLVADSVLDMDRVLLDSMRAKIDDELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEHLKITETKTVAVGQKMDLVFYTLQLGFFGMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFEKAATLFLDSISTFTTYELFPYDTFIFYTVLTSIITLDRVSLKQKVVDAPEILTVIEKIPHLKEFLDSLYGCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREIRTVIYSQFLESYKSVTIEAMAKAFGVSVDFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL*