AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0658590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658590 MtrunA17_Chr8g0381831 96.822 818 25 1 1 817 25 842 0.0 1645
Msa0658590 MtrunA17_Chr3g0123801 66.709 784 221 9 1 767 1 761 0.0 1055
Msa0658590 MtrunA17_Chr3g0102711 30.876 217 118 6 166 378 296 484 3.67e-18 89.4
Msa0658590 MtrunA17_Chr5g0446691 33.728 169 86 7 185 351 340 484 9.68e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658590 AT2G22400.1 60.396 808 276 14 8 788 11 801 0.0 973
Msa0658590 AT4G40000.1 57.143 791 293 10 1 773 1 763 0.0 876
Msa0658590 AT4G40000.2 55.208 576 215 9 216 773 1 551 0.0 608
Msa0658590 AT4G26600.1 29.730 296 157 12 166 445 327 587 4.65e-17 86.3
Msa0658590 AT4G26600.3 29.730 296 157 12 166 445 327 587 5.73e-17 85.9
Msa0658590 AT5G55920.1 30.244 205 111 6 161 359 339 517 2.55e-16 84.0
Msa0658590 AT4G26600.8 31.313 198 108 4 166 359 327 500 3.92e-16 82.8
Msa0658590 AT4G26600.7 29.954 217 120 5 166 378 327 515 3.94e-16 82.8
Msa0658590 AT3G13180.1 31.361 169 90 4 185 351 334 478 5.63e-13 72.8

Find 200 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAGGATGCCGTTTAAA+AGG 0.190650 4_3:+68812190 Msa0658590:CDS
TAAAAGAAAGCTACAATATC+AGG 0.193012 4_3:+68815187 Msa0658590:CDS
TGCAAGGTTCACATAAATTT+AGG 0.224737 4_3:-68816839 None:intergenic
TTTACTTTCTGCAGGAATTC+AGG 0.226926 4_3:+68812399 Msa0658590:intron
TTCCGTTCTTGCAGCTATTC+TGG 0.233522 4_3:+68814944 Msa0658590:intron
GCTCTTCACCATGTGCTTTC+CGG 0.245863 4_3:+68816173 Msa0658590:CDS
CTTCATGATTAGTAACAATT+AGG 0.246866 4_3:-68812159 None:intergenic
TGGTTGTTGCGTGGTTATTA+TGG 0.247821 4_3:+68816354 Msa0658590:CDS
TTAAAGCTAGAAAATGAAAT+TGG 0.254499 4_3:+68811273 Msa0658590:CDS
GGCACAGAAAATGGCTCTTC+TGG 0.261873 4_3:+68816612 Msa0658590:CDS
CTTTCCAGTATGTTTCCTTC+TGG 0.278031 4_3:+68814539 Msa0658590:CDS
TCCTTCTGGCAAATGCTATC+AGG 0.284071 4_3:+68814553 Msa0658590:CDS
CATCATTTAGAATCAATTCT+AGG 0.285604 4_3:+68809791 Msa0658590:CDS
GGTTTATCTTTACTCAAAAT+CGG 0.300019 4_3:+68813358 Msa0658590:intron
AAAGTCTTGCAAGCAATTCT+TGG 0.304314 4_3:-68816578 None:intergenic
ACGGAACTTGGGAACATCTT+TGG 0.305209 4_3:-68814504 None:intergenic
TTCCGTTCTTCACGTGTTAG+AGG 0.306424 4_3:-68815107 None:intergenic
ATAGGTTCCTCCCCTATTCT+TGG 0.312286 4_3:+68811689 Msa0658590:intron
TGGTTATGTATGGAAGAATA+AGG 0.325256 4_3:-68816216 None:intergenic
GATGCAGTTGTGGCGCGTTT+TGG 0.332809 4_3:-68809510 None:intergenic
TGTATCCCATACAGATGATT+TGG 0.333655 4_3:+68815076 Msa0658590:CDS
TCCTCTACCCATGGTTGCTC+TGG 0.337907 4_3:-68809539 None:intergenic
ATACGTCTAGGCACAGAAAA+TGG 0.356138 4_3:+68816603 Msa0658590:CDS
TACCATTTCCGCCACATATC+AGG 0.360042 4_3:-68812316 None:intergenic
GGTTGTTGCGTGGTTATTAT+GGG 0.360528 4_3:+68816355 Msa0658590:CDS
GTCAAAACAGAGAAAACGTT+TGG 0.362743 4_3:+68809590 Msa0658590:CDS
CGGCCTTTGCCCTGGTATCC+CGG 0.363804 4_3:+68810087 Msa0658590:CDS
GTACTTAGAACCAGGGAGTC+AGG 0.375840 4_3:-68816880 None:intergenic
GTTTATCTTTACTCAAAATC+GGG 0.381887 4_3:+68813359 Msa0658590:CDS
CTGAATGCACATCCAAGAAT+AGG 0.383509 4_3:-68811701 None:intergenic
AATCACACTTCTACGGAACT+TGG 0.388539 4_3:-68814516 None:intergenic
TATCTTCCAAATCATCTGTA+TGG 0.390960 4_3:-68815082 None:intergenic
TGAATGCACATCCAAGAATA+GGG 0.393782 4_3:-68811700 None:intergenic
GCTTACTGTCAAGTACAAAA+TGG 0.398024 4_3:-68811725 None:intergenic
AACACAGCAGAGAAGGTTCC+AGG 0.405306 4_3:+68815164 Msa0658590:CDS
AGCAAAGTTCCCGGGATACC+AGG 0.408224 4_3:-68810097 None:intergenic
TTCTAAGTACTCCTTTGTAT+TGG 0.410391 4_3:+68816893 Msa0658590:three_prime_UTR
AGCTACAATATCAGGGCAAA+TGG 0.412664 4_3:+68815195 Msa0658590:CDS
TTACTTTCTGCAGGAATTCA+GGG 0.413804 4_3:+68812400 Msa0658590:intron
GTCGGCCAGGTCTCAAGAAA+TGG 0.414879 4_3:+68813809 Msa0658590:CDS
CACCTGATATGTGGCGGAAA+TGG 0.415761 4_3:+68812314 Msa0658590:CDS
AAGACAGGAAGCTGTTAGTA+TGG 0.418992 4_3:+68811305 Msa0658590:CDS
TATTGTTGCGTTGAACTTCT+CGG 0.421626 4_3:+68815385 Msa0658590:CDS
CAATCGGATGCTGGAGGGGT+AGG 0.425361 4_3:+68816520 Msa0658590:CDS
TTCACCTCCAACATAGTTAG+AGG 0.427601 4_3:-68816649 None:intergenic
ATAATTTGCTTGGTTATGTA+TGG 0.434010 4_3:-68816226 None:intergenic
GCATAGCAATTAAAACTTGT+AGG 0.441578 4_3:-68812443 None:intergenic
GGTTATGTATGGAAGAATAA+GGG 0.441749 4_3:-68816215 None:intergenic
TGAATGCCAAGCAAAGTTCC+CGG 0.442297 4_3:-68810106 None:intergenic
ATTCTCAAACTACTACTCAT+TGG 0.443034 4_3:+68809656 Msa0658590:CDS
GGTGTATAGTCTCGAGCAAT+TGG 0.445281 4_3:-68811885 None:intergenic
TTGTTGACTCGTCAACTTTG+AGG 0.446066 4_3:-68816494 None:intergenic
TCGGAGGATAAGGAAGGGTC+TGG 0.446587 4_3:-68809631 None:intergenic
AATTGTTGATCCACAAGAAT+GGG 0.449501 4_3:+68809732 Msa0658590:CDS
GGCAAATGCTATCAGGATCT+TGG 0.450132 4_3:+68814560 Msa0658590:CDS
GGTATCCCGGGAACTTTGCT+TGG 0.450478 4_3:+68810100 Msa0658590:CDS
TGTTGACTCGTCAACTTTGA+GGG 0.452988 4_3:-68816493 None:intergenic
AAAAGGGAATTATGAAAGAA+TGG 0.453153 4_3:+68812207 Msa0658590:CDS
TGATGATATTCGTTCCCAAT+TGG 0.458564 4_3:+68809915 Msa0658590:CDS
GATAAGGAAGGGTCTGGATC+TGG 0.459026 4_3:-68809625 None:intergenic
GCACAGAAAATGGCTCTTCT+GGG 0.461885 4_3:+68816613 Msa0658590:CDS
TCCTCAAGACTCTGTTTGCT+AGG 0.463373 4_3:-68814972 None:intergenic
GGACTTCAAGCGTCTTCTGC+AGG 0.467959 4_3:+68816264 Msa0658590:CDS
TGCGTGGTTATTATGGGTAA+AGG 0.468510 4_3:+68816361 Msa0658590:CDS
GCAATCCTTCGGATGATATC+CGG 0.470647 4_3:-68816192 None:intergenic
GATGCTGGAGGGGTAGGGCG+AGG 0.471870 4_3:+68816526 Msa0658590:CDS
TTCCTTTGATTCTTATTACA+AGG 0.477035 4_3:+68809702 Msa0658590:CDS
AGGTGAAGCACAGGCTGTAC+AGG 0.479774 4_3:+68816665 Msa0658590:CDS
GGCCTTTGCCCTGGTATCCC+GGG 0.479981 4_3:+68810088 Msa0658590:CDS
TCCCAGGATGCCGTTTAAAA+GGG 0.480126 4_3:+68812191 Msa0658590:CDS
ATGATTAGTAACAATTAGGT+TGG 0.480820 4_3:-68812155 None:intergenic
GAGGTGAGACAGAGGCGATT+CGG 0.481360 4_3:+68810067 Msa0658590:CDS
CATAACCAAGCAAATTATAC+AGG 0.483742 4_3:+68816231 Msa0658590:CDS
TAGGGCGAGGTTGTCCGTGA+TGG 0.485207 4_3:+68816539 Msa0658590:CDS
TAATTGTTGATCCACAAGAA+TGG 0.487617 4_3:+68809731 Msa0658590:CDS
AGATGCCTGTATAATTTGCT+TGG 0.489845 4_3:-68816236 None:intergenic
TTTGCCAGAAGGAAACATAC+TGG 0.491351 4_3:-68814543 None:intergenic
AATCGGATGCTGGAGGGGTA+GGG 0.491437 4_3:+68816521 Msa0658590:CDS
CAGAAGACGCTTGAAGTCCT+CGG 0.494208 4_3:-68816260 None:intergenic
ACCTTCCATTTCTTGAGACC+TGG 0.495511 4_3:-68813814 None:intergenic
ATGATGCAGGCAATGGTGTT+CGG 0.497996 4_3:-68809774 None:intergenic
AAGAATAAGGGGCAATCCTT+CGG 0.498704 4_3:-68816203 None:intergenic
TTGCAGCACAGCAATGAAGA+AGG 0.499587 4_3:-68814759 None:intergenic
CAACAATAGCAATCGGATGC+TGG 0.499828 4_3:+68816511 Msa0658590:CDS
GACAATTCCTCTAACTATGT+TGG 0.501847 4_3:+68816642 Msa0658590:CDS
GTAACAAGGTGACCATCAAA+TGG 0.503653 4_3:-68815302 None:intergenic
AGAAAATGGCTCTTCTGGGC+AGG 0.504580 4_3:+68816617 Msa0658590:CDS
AAGGCAGCAAACTTATTGCC+TGG 0.507560 4_3:+68816334 Msa0658590:CDS
AGGAATTCAGGGATGGGACA+AGG 0.507941 4_3:+68812411 Msa0658590:intron
AACAATATCCTTGACTGACT+TGG 0.510238 4_3:-68815369 None:intergenic
AGGCGATTCGGCCTTTGCCC+TGG 0.513851 4_3:+68810079 Msa0658590:CDS
GTCCGTGATGGTCTCTGCAA+TGG 0.514638 4_3:+68816551 Msa0658590:CDS
AGGATCACTGCCTGATGGAA+TGG 0.519136 4_3:+68811921 Msa0658590:CDS
GACGAGTCAACAATAGCAAT+CGG 0.521462 4_3:+68816504 Msa0658590:CDS
TGAGACAGTCCCTGACTCCC+TGG 0.523646 4_3:+68816870 Msa0658590:three_prime_UTR
AGAAGACGCTTGAAGTCCTC+GGG 0.525989 4_3:-68816259 None:intergenic
ATGACACAAACCATTCCATC+AGG 0.526171 4_3:-68811931 None:intergenic
AACCTCGTCGTTAGTTTCGA+AGG 0.529695 4_3:+68817053 Msa0658590:three_prime_UTR
TCAGCAGACTCCTCCATCAC+AGG 0.530698 4_3:-68814671 None:intergenic
ACCAGAGCAACCATGGGTAG+AGG 0.533404 4_3:+68809538 Msa0658590:exon
GGTTATTTGTAGGTTGCTGA+AGG 0.535471 4_3:+68810045 Msa0658590:intron
GTTGCGTTGAACTTCTCGGT+TGG 0.536011 4_3:+68815389 Msa0658590:CDS
TGATGCCGAGTTTGGTGAAA+AGG 0.538887 4_3:+68816315 Msa0658590:CDS
CAACTGAAAATGACCTCGGT+TGG 0.539529 4_3:+68815416 Msa0658590:CDS
TTCCTTGTAATAAGAATCAA+AGG 0.539742 4_3:-68809704 None:intergenic
CGTGCATTCACTTCGCGCTG+AGG 0.542110 4_3:+68809948 Msa0658590:CDS
CCACAACTTATTCGTCGGCC+AGG 0.547313 4_3:+68813796 Msa0658590:CDS
ATCTTCCAAATCATCTGTAT+GGG 0.548339 4_3:-68815081 None:intergenic
TTGTAATAAGAATCAAAGGA+AGG 0.549320 4_3:-68809700 None:intergenic
TGGAAAGAATCACACTTCTA+CGG 0.550513 4_3:-68814523 None:intergenic
AGTAACAATTAGGTTGGCTG+TGG 0.551773 4_3:-68812149 None:intergenic
ATCACACTTCTACGGAACTT+GGG 0.552405 4_3:-68814515 None:intergenic
TCCTGATAGCATTTGCCAGA+AGG 0.552899 4_3:-68814554 None:intergenic
TCGTGACCTTCCTCTACCCA+TGG 0.553571 4_3:-68809548 None:intergenic
TTTATCTTTACTCAAAATCG+GGG 0.553832 4_3:+68813360 Msa0658590:CDS
TACTTAGAACCAGGGAGTCA+GGG 0.554184 4_3:-68816879 None:intergenic
TGTAATAAGAATCAAAGGAA+GGG 0.556130 4_3:-68809699 None:intergenic
AAATGGCTCTTCTGGGCAGG+TGG 0.556454 4_3:+68816620 Msa0658590:CDS
ATACACCAATCCACAAAAGC+AGG 0.557146 4_3:+68811901 Msa0658590:CDS
TGCACAAAACACAGCAGAGA+AGG 0.560171 4_3:+68815157 Msa0658590:CDS
AGCTTCCACAACTTATTCGT+CGG 0.560441 4_3:+68813791 Msa0658590:CDS
TCATCAAACCAGAGCAACCA+TGG 0.560896 4_3:+68809531 Msa0658590:exon
CTGTGCGATGTCCCGTGTAG+TGG 0.563031 4_3:+68812271 Msa0658590:CDS
AATTGGAAATATCACAAGAC+AGG 0.565338 4_3:+68811290 Msa0658590:CDS
CTATGTTGGAGGTGAAGCAC+AGG 0.566402 4_3:+68816656 Msa0658590:CDS
ATCCTCATGCAATGCTCTAG+AGG 0.566410 4_3:-68814710 None:intergenic
GAATGCCAAGCAAAGTTCCC+GGG 0.567018 4_3:-68810105 None:intergenic
TTCTGCAGGAATTCAGGGAT+GGG 0.568230 4_3:+68812405 Msa0658590:intron
TTCCCGGGATACCAGGGCAA+AGG 0.568734 4_3:-68810090 None:intergenic
CATGAAGCACAACATTTCCC+AGG 0.569181 4_3:+68812175 Msa0658590:CDS
TTTCTGCAGGAATTCAGGGA+TGG 0.570795 4_3:+68812404 Msa0658590:intron
AAAGCTGCTGTGAGTTAGAG+AGG 0.571057 4_3:+68816717 Msa0658590:exon
ATGAATTGATCCCATTCTTG+TGG 0.571295 4_3:-68809742 None:intergenic
GTTATGTATGGAAGAATAAG+GGG 0.573543 4_3:-68816214 None:intergenic
ACAAAGGAGTACTTAGAACC+AGG 0.576389 4_3:-68816888 None:intergenic
GAATTGATTCTAAATGATGC+AGG 0.577108 4_3:-68809787 None:intergenic
AAGGTCACGAACTCAAAGAA+AGG 0.577671 4_3:+68809561 Msa0658590:CDS
TTCGTAAGGCACCTGATATG+TGG 0.580986 4_3:+68812305 Msa0658590:CDS
AAAAGAAAGCTACAATATCA+GGG 0.582226 4_3:+68815188 Msa0658590:CDS
ATAGCAATCGGATGCTGGAG+GGG 0.584256 4_3:+68816516 Msa0658590:CDS
CTGGTTTGATGATGCAGTTG+TGG 0.584330 4_3:-68809520 None:intergenic
TGCTGAAGGAGGTGAGACAG+AGG 0.584654 4_3:+68810059 Msa0658590:CDS
TATCAATGTTTCGTGTAACA+AGG 0.585607 4_3:-68815316 None:intergenic
AATAGCAATCGGATGCTGGA+GGG 0.585812 4_3:+68816515 Msa0658590:CDS
GGAATTCAGGGATGGGACAA+GGG 0.587424 4_3:+68812412 Msa0658590:intron
AATTCCTCTAACTATGTTGG+AGG 0.587774 4_3:+68816645 Msa0658590:CDS
GTCCTCTAACACGTGAAGAA+CGG 0.593200 4_3:+68815105 Msa0658590:CDS
TGGAGATGGTACACTTCGTA+AGG 0.594241 4_3:+68812291 Msa0658590:CDS
TATTTGTAGGTTGCTGAAGG+AGG 0.594800 4_3:+68810048 Msa0658590:intron
GAACACGATCAAATAACAGT+TGG 0.595675 4_3:-68812249 None:intergenic
GCAAAGTTCCCGGGATACCA+GGG 0.600427 4_3:-68810096 None:intergenic
CTATGTCTCCAAGTCAGTCA+AGG 0.602696 4_3:+68815361 Msa0658590:CDS
GAAAGACAAACAGCACGAGA+AGG 0.602807 4_3:+68816148 Msa0658590:CDS
CTTATTGCCTGGTTGTTGCG+TGG 0.607662 4_3:+68816345 Msa0658590:CDS
AAAGCAGGATCACTGCCTGA+TGG 0.612819 4_3:+68811916 Msa0658590:CDS
CAATAGCAATCGGATGCTGG+AGG 0.613159 4_3:+68816514 Msa0658590:CDS
CCTGGCCGACGAATAAGTTG+TGG 0.613657 4_3:-68813796 None:intergenic
AGACAAACAGCACGAGAAGG+TGG 0.614134 4_3:+68816151 Msa0658590:CDS
GCTCCAGTGTTCTGATCATG+AGG 0.618002 4_3:-68814737 None:intergenic
GCTTAGGAAGAATCAAACAT+TGG 0.618665 4_3:+68810146 Msa0658590:CDS
TCCTATTGAAAATGAAGCTG+TGG 0.620217 4_3:+68813414 Msa0658590:CDS
ATGCCTCATGATCAGAACAC+TGG 0.621782 4_3:+68814734 Msa0658590:CDS
GATGTCCCGTGTAGTGGAGA+TGG 0.622673 4_3:+68812277 Msa0658590:CDS
GGAAGATGACATTACTAGTG+TGG 0.624217 4_3:+68814607 Msa0658590:CDS
AGGTATATGACAAGAGCAGT+TGG 0.624400 4_3:+68814471 Msa0658590:intron
ACTAGAGAATCCTGTGATGG+AGG 0.624811 4_3:+68814661 Msa0658590:CDS
CAAAGGAGTACTTAGAACCA+GGG 0.627661 4_3:-68816887 None:intergenic
GATGATATCCGGAAAGCACA+TGG 0.628461 4_3:-68816181 None:intergenic
CTGTCTCAGTAACTAATGCA+AGG 0.629444 4_3:-68816855 None:intergenic
GAGCAACCATGGGTAGAGGA+AGG 0.629891 4_3:+68809542 Msa0658590:exon
CAATATCAGGGCAAATGGAG+AGG 0.631567 4_3:+68815200 Msa0658590:CDS
ATAATAACCACGCAACAACC+AGG 0.639292 4_3:-68816352 None:intergenic
ATTCTAAATGATGCAGGCAA+TGG 0.639368 4_3:-68809781 None:intergenic
CATATGAGACTACCTGGCAG+AGG 0.641063 4_3:-68814791 None:intergenic
TTCCTCTAGAGCATTGCATG+AGG 0.643867 4_3:+68814708 Msa0658590:CDS
GAATGCACATCCAAGAATAG+GGG 0.644846 4_3:-68811699 None:intergenic
CATCAAACCAGAGCAACCAT+GGG 0.648138 4_3:+68809532 Msa0658590:exon
ACGTGAAGAACGGAATTCTG+AGG 0.648938 4_3:+68815115 Msa0658590:CDS
GCCAGGTCTCAAGAAATGGA+AGG 0.649652 4_3:+68813813 Msa0658590:CDS
TAGTAATTGTAATGTTGACA+TGG 0.651091 4_3:+68814586 Msa0658590:CDS
TGCACATCCAAGAATAGGGG+AGG 0.651957 4_3:-68811696 None:intergenic
AGCACTAGAGAATCCTGTGA+TGG 0.653225 4_3:+68814658 Msa0658590:CDS
AAGCTGCTGTGAGTTAGAGA+GGG 0.654500 4_3:+68816718 Msa0658590:exon
AGTGTACCATCTCCACTACA+CGG 0.655332 4_3:-68812283 None:intergenic
GTGTACCATCTCCACTACAC+GGG 0.658766 4_3:-68812282 None:intergenic
AATTATACAGGCATCTCCCG+AGG 0.660476 4_3:+68816243 Msa0658590:CDS
GGAAGAATCAAACATTGGAG+AGG 0.660823 4_3:+68810151 Msa0658590:CDS
GAGTATGAGTACCAATACAA+AGG 0.663613 4_3:-68816904 None:intergenic
GTAAGGCACCTGATATGTGG+CGG 0.665415 4_3:+68812308 Msa0658590:CDS
GCTTTCCGGATATCATCCGA+AGG 0.673685 4_3:+68816187 Msa0658590:CDS
ACCTAGCAAACAGAGTCTTG+AGG 0.674715 4_3:+68814971 Msa0658590:CDS
TGTGATGGAGGAGTCTGCTG+AGG 0.678814 4_3:+68814673 Msa0658590:CDS
AAATGAAGCTGTGGTTGCAG+AGG 0.679409 4_3:+68813423 Msa0658590:CDS
GTCCATTGCAGAGACCATCA+CGG 0.681705 4_3:-68816553 None:intergenic
TTATCTTTACTCAAAATCGG+GGG 0.696495 4_3:+68813361 Msa0658590:CDS
TCAGCAACTGAAAATGACCT+CGG 0.702374 4_3:+68815412 Msa0658590:CDS
AGTCGTCAAAGCAGTTCCAG+AGG 0.703422 4_3:+68815037 Msa0658590:CDS
AAACATCTTCATGCCAACCG+AGG 0.713060 4_3:-68815429 None:intergenic
TGCCTTCGAAACTAACGACG+AGG 0.720498 4_3:-68817055 None:intergenic
GTTTCAGATGAATTCATGTG+CGG 0.725014 4_3:-68815005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATAAGTAATATTTTCT+GGG + chr4_3:68810534-68810553 Msa0658590:intron 10.0%
!!! ATAATTTTAATTTCAGTTAA+TGG - chr4_3:68811161-68811180 None:intergenic 10.0%
!!! TAAGTCTTAAAAAATATTTT+AGG - chr4_3:68812378-68812397 None:intergenic 10.0%
!!! GAATATTTTACATATATTTT+AGG + chr4_3:68812478-68812497 Msa0658590:intron 10.0%
!! AATTATTATTTATTCAAATC+AGG - chr4_3:68815546-68815565 None:intergenic 10.0%
!! TAAATCTATTATTATTTGAA+TGG + chr4_3:68816027-68816046 Msa0658590:intron 10.0%
!! TGATTATAATTTATGTGAAT+TGG + chr4_3:68810024-68810043 Msa0658590:intron 15.0%
!!! GTATAATAAGTAATATTTTC+TGG + chr4_3:68810533-68810552 Msa0658590:intron 15.0%
!! TTAAAAAGATATCAATATCA+GGG + chr4_3:68810642-68810661 Msa0658590:intron 15.0%
!! AAAATAAAGCATGTAATATT+GGG - chr4_3:68810715-68810734 None:intergenic 15.0%
!! AAAAATAAAGCATGTAATAT+TGG - chr4_3:68810716-68810735 None:intergenic 15.0%
!! AGACATAAATAAATTCTTAA+AGG - chr4_3:68811651-68811670 None:intergenic 15.0%
!!! AATAGTTTGCTAAAATTATT+GGG + chr4_3:68812006-68812025 Msa0658590:intron 15.0%
!! AATGTATTAAAATCAAAACT+CGG - chr4_3:68813891-68813910 None:intergenic 15.0%
!! CAATTACATTAAAAAATCAT+TGG - chr4_3:68814066-68814085 None:intergenic 15.0%
!!! CAATGATTTTTTAATGTAAT+TGG + chr4_3:68814064-68814083 Msa0658590:intron 15.0%
!!! AACAGTATAAAGAATTTTTA+TGG + chr4_3:68815263-68815282 Msa0658590:CDS 15.0%
!!! TTCATATCTTTTTTTTTTTG+AGG + chr4_3:68815785-68815804 Msa0658590:intron 15.0%
!!! TCATATCTTTTTTTTTTTGA+GGG + chr4_3:68815786-68815805 Msa0658590:intron 15.0%
!!! TATTTTTGACATAATTTGTA+AGG + chr4_3:68815823-68815842 Msa0658590:intron 15.0%
!!! ATTTATGTTATTGCATTTTA+TGG + chr4_3:68816779-68816798 Msa0658590:three_prime_UTR 15.0%
!!! ATTTTATCATTTAACATTCA+CGG - chr4_3:68817029-68817048 None:intergenic 15.0%
!!! AAATGAATTTTGTGTTTGTT+TGG + chr4_3:68809871-68809890 Msa0658590:intron 20.0%
!!! TGAGGTATTAAAAATGATTA+TGG + chr4_3:68809966-68809985 Msa0658590:intron 20.0%
!! GTCAAATAAACAAGTTAATT+AGG - chr4_3:68810560-68810579 None:intergenic 20.0%
!! GTTAAAAAGATATCAATATC+AGG + chr4_3:68810641-68810660 Msa0658590:intron 20.0%
!! TAAAAAGATATCAATATCAG+GGG + chr4_3:68810643-68810662 Msa0658590:intron 20.0%
!!! ATATTAAACTAATTTAGCTC+TGG + chr4_3:68810978-68810997 Msa0658590:intron 20.0%
!! TTAAAGCTAGAAAATGAAAT+TGG + chr4_3:68811273-68811292 Msa0658590:CDS 20.0%
!! CTAAAACAAAGAAAAATGAA+AGG - chr4_3:68811837-68811856 None:intergenic 20.0%
!! ACAATCAAAGCAATTAAAAA+TGG - chr4_3:68811969-68811988 None:intergenic 20.0%
!!! CAATAGTTTGCTAAAATTAT+TGG + chr4_3:68812005-68812024 Msa0658590:intron 20.0%
!!! CTAGTTTCTTATTTGTAATT+AGG + chr4_3:68812063-68812082 Msa0658590:intron 20.0%
!!! TTTCATAATTCCCTTTTAAA+CGG - chr4_3:68812204-68812223 None:intergenic 20.0%
!!! CAAATGATTACAAAGTTTTT+AGG - chr4_3:68812770-68812789 None:intergenic 20.0%
!! ATTTAGTCACAAAAAGTTAA+TGG + chr4_3:68812924-68812943 Msa0658590:intron 20.0%
!!! ATCCATAAATTTTATGAACA+CGG - chr4_3:68813590-68813609 None:intergenic 20.0%
!!! TTATTAGATTTTCATGTACT+GGG - chr4_3:68813670-68813689 None:intergenic 20.0%
!!! ACTAAAACTTTAGAATGTAT+AGG - chr4_3:68813943-68813962 None:intergenic 20.0%
!!! TATACATTCTAAAGTTTTAG+TGG + chr4_3:68813942-68813961 Msa0658590:intron 20.0%
!! GTATCATTGCATAATATTAA+AGG - chr4_3:68813994-68814013 None:intergenic 20.0%
!!! TTAAAGTTGTTTGATTTTTG+AGG + chr4_3:68814445-68814464 Msa0658590:intron 20.0%
!! AAAATGAATATATACGAACT+TGG - chr4_3:68814891-68814910 None:intergenic 20.0%
!!! TCGTATATATTCATTTTAAC+TGG + chr4_3:68814894-68814913 Msa0658590:intron 20.0%
!!! AGACTTTTTTTATTACATGA+TGG + chr4_3:68815500-68815519 Msa0658590:intron 20.0%
!! TTTATTCAAATCAGGAAAAT+GGG - chr4_3:68815538-68815557 None:intergenic 20.0%
!! ATTTATTCAAATCAGGAAAA+TGG - chr4_3:68815539-68815558 None:intergenic 20.0%
!! TCAAAGATAATTATATCTCT+TGG + chr4_3:68815642-68815661 Msa0658590:intron 20.0%
!!! TTTTATCATTTAACATTCAC+GGG - chr4_3:68817028-68817047 None:intergenic 20.0%
!! AGTAGTAGTTTGAGAATTTT+CGG - chr4_3:68809653-68809672 None:intergenic 25.0%
! TGTAATAAGAATCAAAGGAA+GGG - chr4_3:68809702-68809721 None:intergenic 25.0%
! TTGTAATAAGAATCAAAGGA+AGG - chr4_3:68809703-68809722 None:intergenic 25.0%
! TTCCTTTGATTCTTATTACA+AGG + chr4_3:68809702-68809721 Msa0658590:CDS 25.0%
! TTCCTTGTAATAAGAATCAA+AGG - chr4_3:68809707-68809726 None:intergenic 25.0%
!! CATCATTTAGAATCAATTCT+AGG + chr4_3:68809791-68809810 Msa0658590:CDS 25.0%
! TATGTGAATTGGTTATTTGT+AGG + chr4_3:68810035-68810054 Msa0658590:intron 25.0%
!!! ATAGAACCAACAAAAGTATT+AGG + chr4_3:68810222-68810241 Msa0658590:intron 25.0%
!!! TAGAACCAACAAAAGTATTA+GGG + chr4_3:68810223-68810242 Msa0658590:intron 25.0%
!! AATATCCCTAATACTTTTGT+TGG - chr4_3:68810231-68810250 None:intergenic 25.0%
!! TCCCTAAATCATTTTCTAAA+GGG - chr4_3:68810928-68810947 None:intergenic 25.0%
!! ATCCCTAAATCATTTTCTAA+AGG - chr4_3:68810929-68810948 None:intergenic 25.0%
!!! TTTCTAGCTTTAAAAATTCG+TGG - chr4_3:68811266-68811285 None:intergenic 25.0%
! GATTGAAAGAGAATATAAAG+TGG - chr4_3:68811336-68811355 None:intergenic 25.0%
! AATCTTCATGATCATACAAA+AGG + chr4_3:68811352-68811371 Msa0658590:intron 25.0%
! ATATATTACAGAGTTTACAC+AGG + chr4_3:68811458-68811477 Msa0658590:intron 25.0%
! TGATACTTTAACAGAAATCA+CGG + chr4_3:68811543-68811562 Msa0658590:intron 25.0%
!!! CTAATGTTTGTTTTTGACAT+AGG + chr4_3:68811671-68811690 Msa0658590:intron 25.0%
!! CTTTGATTGTCAATTGTTTT+TGG + chr4_3:68811979-68811998 Msa0658590:intron 25.0%
! ATGATTAGTAACAATTAGGT+TGG - chr4_3:68812158-68812177 None:intergenic 25.0%
! CTTCATGATTAGTAACAATT+AGG - chr4_3:68812162-68812181 None:intergenic 25.0%
! AAAAGGGAATTATGAAAGAA+TGG + chr4_3:68812207-68812226 Msa0658590:CDS 25.0%
!!! GCTTTTTCCAATTAGAAAAT+TGG + chr4_3:68812568-68812587 Msa0658590:intron 25.0%
!! CCTATTACCAATTTTCTAAT+TGG - chr4_3:68812578-68812597 None:intergenic 25.0%
!! CCAATTAGAAAATTGGTAAT+AGG + chr4_3:68812575-68812594 Msa0658590:intron 25.0%
!!! TTACAAAGTTTTTAGGATGA+GGG - chr4_3:68812763-68812782 None:intergenic 25.0%
!!! ATTACAAAGTTTTTAGGATG+AGG - chr4_3:68812764-68812783 None:intergenic 25.0%
! TAACTATGACAAATCTAGTT+TGG - chr4_3:68812878-68812897 None:intergenic 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr4_3:68813014-68813033 None:intergenic 25.0%
! TATAAGGAGCAATATTAATC+TGG - chr4_3:68813026-68813045 None:intergenic 25.0%
!!! TTGCTCCTTATATGTTTTAA+AGG + chr4_3:68813034-68813053 Msa0658590:intron 25.0%
!!! TGCTCCTTATATGTTTTAAA+GGG + chr4_3:68813035-68813054 Msa0658590:intron 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr4_3:68813014-68813033 None:intergenic 25.0%
!!! TCTTTAAAACATATAAGGAG+CGG - chr4_3:68813117-68813136 None:intergenic 25.0%
!!! TGTGCTCTTTAAAACATATA+AGG - chr4_3:68813122-68813141 None:intergenic 25.0%
!!! AAAAACATTATTTTGCAGCA+AGG + chr4_3:68813220-68813239 Msa0658590:intron 25.0%
!! ATTATGTTGCTTACATATCT+AGG + chr4_3:68813254-68813273 Msa0658590:intron 25.0%
! GATAATCAATATAGTTGTTG+AGG - chr4_3:68813335-68813354 None:intergenic 25.0%
!! ACAACTATATTGATTATCTC+AGG + chr4_3:68813337-68813356 Msa0658590:intron 25.0%
! GGTTTATCTTTACTCAAAAT+CGG + chr4_3:68813358-68813377 Msa0658590:intron 25.0%
! GTTTATCTTTACTCAAAATC+GGG + chr4_3:68813359-68813378 Msa0658590:CDS 25.0%
! TTTATCTTTACTCAAAATCG+GGG + chr4_3:68813360-68813379 Msa0658590:CDS 25.0%
! TACCGTGTTCATAAAATTTA+TGG + chr4_3:68813585-68813604 Msa0658590:intron 25.0%
!! TTTTTCTAAGTGTGTATGTA+AGG - chr4_3:68813616-68813635 None:intergenic 25.0%
! CACTTAGAAAAAATTCAACA+CGG + chr4_3:68813624-68813643 Msa0658590:intron 25.0%
!! CTTATTAGATTTTCATGTAC+TGG - chr4_3:68813671-68813690 None:intergenic 25.0%
! CAGTACATGAAAATCTAATA+AGG + chr4_3:68813669-68813688 Msa0658590:intron 25.0%
! ATTAAAATCAAAACTCGGTT+TGG - chr4_3:68813886-68813905 None:intergenic 25.0%
!!! AGGATTTTGAAGGAAAATAA+TGG + chr4_3:68814021-68814040 Msa0658590:intron 25.0%
!!! GGATTTTGAAGGAAAATAAT+GGG + chr4_3:68814022-68814041 Msa0658590:intron 25.0%
!! ATGTAATTGGTGTTTCATAT+AGG + chr4_3:68814077-68814096 Msa0658590:intron 25.0%
!! TGTAATTGGTGTTTCATATA+GGG + chr4_3:68814078-68814097 Msa0658590:intron 25.0%
! TTATGGCTTCAAATATAGAA+GGG + chr4_3:68814377-68814396 Msa0658590:intron 25.0%
! TAGTAATTGTAATGTTGACA+TGG + chr4_3:68814586-68814605 Msa0658590:CDS 25.0%
! GAAAATGAAAAAACTGAAGA+TGG + chr4_3:68814629-68814648 Msa0658590:CDS 25.0%
!! ACTAAATAGTCAGGAAATTT+TGG + chr4_3:68814847-68814866 Msa0658590:intron 25.0%
!!! TCAGGAAATTTTGGTTAATA+AGG + chr4_3:68814856-68814875 Msa0658590:intron 25.0%
!!! CAGGAAATTTTGGTTAATAA+GGG + chr4_3:68814857-68814876 Msa0658590:intron 25.0%
! TAAAAGAAAGCTACAATATC+AGG + chr4_3:68815187-68815206 Msa0658590:CDS 25.0%
! AAAAGAAAGCTACAATATCA+GGG + chr4_3:68815188-68815207 Msa0658590:CDS 25.0%
!! CATCTTTAAAAAAGACAACA+GGG - chr4_3:68815232-68815251 None:intergenic 25.0%
!! TCATCTTTAAAAAAGACAAC+AGG - chr4_3:68815233-68815252 None:intergenic 25.0%
! CAAGTTCATTAAATGATCTA+TGG - chr4_3:68815695-68815714 None:intergenic 25.0%
!!! ATAATTTGCTTGGTTATGTA+TGG - chr4_3:68816229-68816248 None:intergenic 25.0%
!! GTTATTGCATTTTATGGAAA+TGG + chr4_3:68816785-68816804 Msa0658590:three_prime_UTR 25.0%
ATTCTCAAACTACTACTCAT+TGG + chr4_3:68809656-68809675 Msa0658590:CDS 30.0%
TAATTGTTGATCCACAAGAA+TGG + chr4_3:68809731-68809750 Msa0658590:CDS 30.0%
AATTGTTGATCCACAAGAAT+GGG + chr4_3:68809732-68809751 Msa0658590:CDS 30.0%
! GAATTGATTCTAAATGATGC+AGG - chr4_3:68809790-68809809 None:intergenic 30.0%
! CACGAAATCATTTTCCAATT+GGG - chr4_3:68809932-68809951 None:intergenic 30.0%
!!! ATCCAAAATTCTGTTTTAGC+GGG - chr4_3:68810430-68810449 None:intergenic 30.0%
!! CATCCAAAATTCTGTTTTAG+CGG - chr4_3:68810431-68810450 None:intergenic 30.0%
TAGAATAGTAGCAGACTATT+TGG + chr4_3:68810752-68810771 Msa0658590:intron 30.0%
AGTCATACCATGTAGAAATA+AGG - chr4_3:68810887-68810906 None:intergenic 30.0%
! TCCCCTTTAGAAAATGATTT+AGG + chr4_3:68810923-68810942 Msa0658590:intron 30.0%
!! CCCTAAATCATTTTCTAAAG+GGG - chr4_3:68810927-68810946 None:intergenic 30.0%
! CCCCTTTAGAAAATGATTTA+GGG + chr4_3:68810924-68810943 Msa0658590:intron 30.0%
AATTGGAAATATCACAAGAC+AGG + chr4_3:68811290-68811309 Msa0658590:CDS 30.0%
! TTTTGTTCTAGTACTCTGAA+TGG + chr4_3:68811382-68811401 Msa0658590:intron 30.0%
TAAAAAGTAGCAGTAACCTA+CGG - chr4_3:68811416-68811435 None:intergenic 30.0%
GAATTGAAAGAAAAGTGAAG+AGG + chr4_3:68811480-68811499 Msa0658590:intron 30.0%
CAAATTAAGCAAATCGAATC+AGG - chr4_3:68811790-68811809 None:intergenic 30.0%
!! AATTGGAATGTTTTTGAACC+TGG - chr4_3:68811871-68811890 None:intergenic 30.0%
!! TGGACATTCTTTTTGTTTGA+TGG - chr4_3:68812132-68812151 None:intergenic 30.0%
GGTTGTAAAGAAAGTAGAAT+TGG - chr4_3:68812357-68812376 None:intergenic 30.0%
!!! AGACTTATTTTACTTTCTGC+AGG + chr4_3:68812391-68812410 Msa0658590:intron 30.0%
GCATAGCAATTAAAACTTGT+AGG - chr4_3:68812446-68812465 None:intergenic 30.0%
! AAATTGGTAATAGGCAATGA+AGG + chr4_3:68812584-68812603 Msa0658590:intron 30.0%
!! GATGACTTTGATTTTAATCC+TGG + chr4_3:68812644-68812663 Msa0658590:intron 30.0%
TTTATTGCAAATCTTTCTCG+AGG + chr4_3:68812695-68812714 Msa0658590:intron 30.0%
!!! TACAAAGTTTTTAGGATGAG+GGG - chr4_3:68812762-68812781 None:intergenic 30.0%
CACAAAATTAACCCATTATC+AGG - chr4_3:68812830-68812849 None:intergenic 30.0%
CTAGATTTGTCATAGTTATC+TGG + chr4_3:68812880-68812899 Msa0658590:intron 30.0%
GGTTACAAATTTCAAACAGA+AGG - chr4_3:68812968-68812987 None:intergenic 30.0%
!! TGTGCCCTTTAAAACATATA+AGG - chr4_3:68813042-68813061 None:intergenic 30.0%
TTATCTTTACTCAAAATCGG+GGG + chr4_3:68813361-68813380 Msa0658590:CDS 30.0%
AAAATTCAACACGGAGAAAT+AGG + chr4_3:68813633-68813652 Msa0658590:intron 30.0%
AAAGAGGGGATAAAGAAAAA+TGG - chr4_3:68813709-68813728 None:intergenic 30.0%
!!! TAAAGTTTTAGTGGATTCCT+GGG + chr4_3:68813951-68813970 Msa0658590:intron 30.0%
TATGCAATGATACAATCTGA+AGG + chr4_3:68814001-68814020 Msa0658590:intron 30.0%
! TACAATCTGAAGGATTTTGA+AGG + chr4_3:68814011-68814030 Msa0658590:intron 30.0%
!! TTTTGAAGGAAAATAATGGG+TGG + chr4_3:68814025-68814044 Msa0658590:intron 30.0%
!! TTTGCTGATTTGCATTTGTT+TGG + chr4_3:68814169-68814188 Msa0658590:intron 30.0%
AATTCTGACATTCAATCAGT+TGG + chr4_3:68814222-68814241 Msa0658590:intron 30.0%
TGCTTACATTAACACATTGA+TGG + chr4_3:68814252-68814271 Msa0658590:intron 30.0%
CTTATGGCTTCAAATATAGA+AGG + chr4_3:68814376-68814395 Msa0658590:intron 30.0%
TTATTACATATGAGACTACC+TGG - chr4_3:68814800-68814819 None:intergenic 30.0%
! TTATCATTCACATTTTCCTC+TGG - chr4_3:68815056-68815075 None:intergenic 30.0%
ATCTTCCAAATCATCTGTAT+GGG - chr4_3:68815084-68815103 None:intergenic 30.0%
TATCTTCCAAATCATCTGTA+TGG - chr4_3:68815085-68815104 None:intergenic 30.0%
! TATTGTAGCTTTCTTTTACC+TGG - chr4_3:68815185-68815204 None:intergenic 30.0%
TATCAATGTTTCGTGTAACA+AGG - chr4_3:68815319-68815338 None:intergenic 30.0%
CTAGTATCTAACTCTAATAG+AGG - chr4_3:68815668-68815687 None:intergenic 30.0%
!!! AACTTGAGTACTTGTTTTGT+TGG + chr4_3:68815709-68815728 Msa0658590:intron 30.0%
!! AACTGCATGTTGAGTTTTAT+TGG + chr4_3:68815742-68815761 Msa0658590:intron 30.0%
GAATGACACATAGAAGAATT+AGG - chr4_3:68815899-68815918 None:intergenic 30.0%
! GTACTAAATTAGTTTCGTCA+AGG + chr4_3:68815993-68816012 Msa0658590:intron 30.0%
ACTTATATCTCACTCATTCA+TGG - chr4_3:68816062-68816081 None:intergenic 30.0%
TATTACTGCTTGTGAATAAC+TGG + chr4_3:68816096-68816115 Msa0658590:intron 30.0%
ATTACTGCTTGTGAATAACT+GGG + chr4_3:68816097-68816116 Msa0658590:intron 30.0%
TTGTCTTTCCTGTAAGATAA+GGG - chr4_3:68816137-68816156 None:intergenic 30.0%
TTTGTCTTTCCTGTAAGATA+AGG - chr4_3:68816138-68816157 None:intergenic 30.0%
GTTATGTATGGAAGAATAAG+GGG - chr4_3:68816217-68816236 None:intergenic 30.0%
GGTTATGTATGGAAGAATAA+GGG - chr4_3:68816218-68816237 None:intergenic 30.0%
TGGTTATGTATGGAAGAATA+AGG - chr4_3:68816219-68816238 None:intergenic 30.0%
CATAACCAAGCAAATTATAC+AGG + chr4_3:68816231-68816250 Msa0658590:CDS 30.0%
! TTATGGGTAAAGGTATGTAT+CGG + chr4_3:68816371-68816390 Msa0658590:intron 30.0%
ATGTCAATGTCAATGTCAAT+GGG - chr4_3:68816421-68816440 None:intergenic 30.0%
TATGTCAATGTCAATGTCAA+TGG - chr4_3:68816422-68816441 None:intergenic 30.0%
!! ATTTAGGATTGAATTTTCCC+AGG - chr4_3:68816826-68816845 None:intergenic 30.0%
TGCAAGGTTCACATAAATTT+AGG - chr4_3:68816842-68816861 None:intergenic 30.0%
TTCTAAGTACTCCTTTGTAT+TGG + chr4_3:68816893-68816912 Msa0658590:three_prime_UTR 30.0%
GTCAAAACAGAGAAAACGTT+TGG + chr4_3:68809590-68809609 Msa0658590:CDS 35.0%
! AATTTTCGGAGGATAAGGAA+GGG - chr4_3:68809639-68809658 None:intergenic 35.0%
! TTGAGAATTTTCGGAGGATA+AGG - chr4_3:68809644-68809663 None:intergenic 35.0%
! AGTAGTTTGAGAATTTTCGG+AGG - chr4_3:68809650-68809669 None:intergenic 35.0%
ATGAATTGATCCCATTCTTG+TGG - chr4_3:68809745-68809764 None:intergenic 35.0%
ATTCTAAATGATGCAGGCAA+TGG - chr4_3:68809784-68809803 None:intergenic 35.0%
TGATGATATTCGTTCCCAAT+TGG + chr4_3:68809915-68809934 Msa0658590:CDS 35.0%
! GCACGAAATCATTTTCCAAT+TGG - chr4_3:68809933-68809952 None:intergenic 35.0%
! CTTGGCATTCAAATTTTTCG+CGG + chr4_3:68810118-68810137 Msa0658590:CDS 35.0%
GCTTAGGAAGAATCAAACAT+TGG + chr4_3:68810146-68810165 Msa0658590:CDS 35.0%
TTAAGGAAGGGAAGAACATT+TGG - chr4_3:68810397-68810416 None:intergenic 35.0%
GTTCTTCCCTTCCTTAATAT+AGG + chr4_3:68810400-68810419 Msa0658590:intron 35.0%
!!! AAAATTCTGTTTTAGCGGGA+AGG - chr4_3:68810426-68810445 None:intergenic 35.0%
! TTCCCGCTAAAACAGAATTT+TGG + chr4_3:68810425-68810444 Msa0658590:intron 35.0%
!! CTTAGTGTTTTGCTATCCAT+TGG + chr4_3:68810589-68810608 Msa0658590:intron 35.0%
!! TGCTATCCATTGGTTTGAAA+TGG + chr4_3:68810599-68810618 Msa0658590:intron 35.0%
!! GCTATCCATTGGTTTGAAAT+GGG + chr4_3:68810600-68810619 Msa0658590:intron 35.0%
!! GATCTGTCCTTATTTCTACA+TGG + chr4_3:68810877-68810896 Msa0658590:intron 35.0%
TTACATATAGCCCTTGAAGT+TGG + chr4_3:68811030-68811049 Msa0658590:intron 35.0%
TGAGAATTTAGCAGAATCAG+AGG - chr4_3:68811239-68811258 None:intergenic 35.0%
TCTGATTCTGCTAAATTCTC+AGG + chr4_3:68811238-68811257 Msa0658590:intron 35.0%
AAAAAGTAGCAGTAACCTAC+GGG - chr4_3:68811415-68811434 None:intergenic 35.0%
TTGAAAGAAAAGTGAAGAGG+CGG + chr4_3:68811483-68811502 Msa0658590:intron 35.0%
TGTTGCGTAGTGATAATCTA+CGG + chr4_3:68811567-68811586 Msa0658590:intron 35.0%
TGAATGCACATCCAAGAATA+GGG - chr4_3:68811703-68811722 None:intergenic 35.0%
GCTTACTGTCAAGTACAAAA+TGG - chr4_3:68811728-68811747 None:intergenic 35.0%
GAACACGATCAAATAACAGT+TGG - chr4_3:68812252-68812271 None:intergenic 35.0%
TTTACTTTCTGCAGGAATTC+AGG + chr4_3:68812399-68812418 Msa0658590:intron 35.0%
TTACTTTCTGCAGGAATTCA+GGG + chr4_3:68812400-68812419 Msa0658590:intron 35.0%
!!! CAAGTTTTAATTGCTATGCG+AGG + chr4_3:68812447-68812466 Msa0658590:CDS 35.0%
CACAGTGAAAACACTAGATA+AGG - chr4_3:68812535-68812554 None:intergenic 35.0%
TTCACTGTGCTCAAATTTGT+TGG + chr4_3:68812546-68812565 Msa0658590:intron 35.0%
ATCGAAATTTCTTGAGCAAG+AGG - chr4_3:68812627-68812646 None:intergenic 35.0%
ACGTAAGTCTAACCTGATAA+TGG + chr4_3:68812815-68812834 Msa0658590:intron 35.0%
CGTAAGTCTAACCTGATAAT+GGG + chr4_3:68812816-68812835 Msa0658590:intron 35.0%
TTTGTCATAGTTATCTGGCA+TGG + chr4_3:68812885-68812904 Msa0658590:intron 35.0%
! TTCAGTTTTCACTCAATGGT+AGG - chr4_3:68812989-68813008 None:intergenic 35.0%
! GGTTTTCAGTTTTCACTCAA+TGG - chr4_3:68812993-68813012 None:intergenic 35.0%
TATAAGGAGCGGTATTAATC+TGG - chr4_3:68813106-68813125 None:intergenic 35.0%
TTGTATAATGTTGAGCCTCA+AGG + chr4_3:68813145-68813164 Msa0658590:intron 35.0%
TCCTATTGAAAATGAAGCTG+TGG + chr4_3:68813414-68813433 Msa0658590:CDS 35.0%
! ACCACAGCTTCATTTTCAAT+AGG - chr4_3:68813418-68813437 None:intergenic 35.0%
GCACGGTATACTAATTTCTT+AGG + chr4_3:68813554-68813573 Msa0658590:intron 35.0%
! TAGATTTTCATGTACTGGGT+CGG - chr4_3:68813666-68813685 None:intergenic 35.0%
ACCTGCAAAACAGTAAAAGA+GGG - chr4_3:68813724-68813743 None:intergenic 35.0%
AACCTGCAAAACAGTAAAAG+AGG - chr4_3:68813725-68813744 None:intergenic 35.0%
! TTACTGTTTTGCAGGTTTTG+CGG + chr4_3:68813728-68813747 Msa0658590:intron 35.0%
!!! CTAAAGTTTTAGTGGATTCC+TGG + chr4_3:68813950-68813969 Msa0658590:intron 35.0%
TTTGCACTTGATTCAGCTTA+TGG + chr4_3:68814360-68814379 Msa0658590:intron 35.0%
!!! TTGTTTGATTTTTGAGGTGC+AGG + chr4_3:68814451-68814470 Msa0658590:intron 35.0%
TGGAAAGAATCACACTTCTA+CGG - chr4_3:68814526-68814545 None:intergenic 35.0%
! ACTGGACTTTTGCTCATAAT+AGG + chr4_3:68814912-68814931 Msa0658590:intron 35.0%
GTTTCAGATGAATTCATGTG+CGG - chr4_3:68815008-68815027 None:intergenic 35.0%
TGTATCCCATACAGATGATT+TGG + chr4_3:68815076-68815095 Msa0658590:CDS 35.0%
AACAATATCCTTGACTGACT+TGG - chr4_3:68815372-68815391 None:intergenic 35.0%
TATTGTTGCGTTGAACTTCT+CGG + chr4_3:68815385-68815404 Msa0658590:CDS 35.0%
!! AGATGCCTGTATAATTTGCT+TGG - chr4_3:68816239-68816258 None:intergenic 35.0%
! ATGTATCGGTGATGAAGAAA+AGG + chr4_3:68816385-68816404 Msa0658590:intron 35.0%
ACATTGACATATCTGTTGAG+CGG + chr4_3:68816431-68816450 Msa0658590:intron 35.0%
AAAGTCTTGCAAGCAATTCT+TGG - chr4_3:68816581-68816600 None:intergenic 35.0%
! GCAAGACTTTTAATACGTCT+AGG + chr4_3:68816591-68816610 Msa0658590:CDS 35.0%
GACAATTCCTCTAACTATGT+TGG + chr4_3:68816642-68816661 Msa0658590:CDS 35.0%
AATTCCTCTAACTATGTTGG+AGG + chr4_3:68816645-68816664 Msa0658590:CDS 35.0%
GAGTATGAGTACCAATACAA+AGG - chr4_3:68816907-68816926 None:intergenic 35.0%
AAGGTCACGAACTCAAAGAA+AGG + chr4_3:68809561-68809580 Msa0658590:CDS 40.0%
! GAATTTTCGGAGGATAAGGA+AGG - chr4_3:68809640-68809659 None:intergenic 40.0%
!!! GAAGGGTTTTGAGTCAAGAA+AGG - chr4_3:68809685-68809704 None:intergenic 40.0%
GGTTATTTGTAGGTTGCTGA+AGG + chr4_3:68810045-68810064 Msa0658590:intron 40.0%
TATTTGTAGGTTGCTGAAGG+AGG + chr4_3:68810048-68810067 Msa0658590:intron 40.0%
GGAAGAATCAAACATTGGAG+AGG + chr4_3:68810151-68810170 Msa0658590:CDS 40.0%
!!! TTCCTGCTTTTTTCGCTTCT+CGG + chr4_3:68810249-68810268 Msa0658590:intron 40.0%
! AGTACTGAGTAGTGACAAAC+TGG - chr4_3:68810372-68810391 None:intergenic 40.0%
GGAAGGCCTATATTAAGGAA+GGG - chr4_3:68810409-68810428 None:intergenic 40.0%
!! CCATTGGTTTGAAATGGGAA+CGG + chr4_3:68810605-68810624 Msa0658590:intron 40.0%
TTAAACAATGCACGTGCATG+AGG - chr4_3:68810821-68810840 None:intergenic 40.0%
TACATGGTATGACTTAGCTC+TGG + chr4_3:68810893-68810912 Msa0658590:intron 40.0%
AATGACTCCTCCAACTTCAA+GGG - chr4_3:68811043-68811062 None:intergenic 40.0%
TTGAAGTTGGAGGAGTCATT+GGG + chr4_3:68811043-68811062 Msa0658590:intron 40.0%
AAGACAGGAAGCTGTTAGTA+TGG + chr4_3:68811305-68811324 Msa0658590:CDS 40.0%
TGAAAGAAAAGTGAAGAGGC+GGG + chr4_3:68811484-68811503 Msa0658590:intron 40.0%
GAATGCACATCCAAGAATAG+GGG - chr4_3:68811702-68811721 None:intergenic 40.0%
CTGAATGCACATCCAAGAAT+AGG - chr4_3:68811704-68811723 None:intergenic 40.0%
ACTTGACAGTAAGCTACTTC+TGG + chr4_3:68811734-68811753 Msa0658590:intron 40.0%
! TCAGGACTGGTAAAAAACAG+AGG - chr4_3:68811772-68811791 None:intergenic 40.0%
TAAGCAAATCGAATCAGGAC+TGG - chr4_3:68811785-68811804 None:intergenic 40.0%
ATACACCAATCCACAAAAGC+AGG + chr4_3:68811901-68811920 Msa0658590:CDS 40.0%
ATGACACAAACCATTCCATC+AGG - chr4_3:68811934-68811953 None:intergenic 40.0%
!! AGTAACAATTAGGTTGGCTG+TGG - chr4_3:68812152-68812171 None:intergenic 40.0%
!!! TTTTAGGGCTTGTCGTTGTT+AGG + chr4_3:68812494-68812513 Msa0658590:intron 40.0%
TGGTAATAGGCAATGAAGGT+TGG + chr4_3:68812588-68812607 Msa0658590:intron 40.0%
TCTTGAGCAAGAGGTCAAAT+TGG - chr4_3:68812618-68812637 None:intergenic 40.0%
TTGCAAATCTTTCTCGAGGT+TGG + chr4_3:68812699-68812718 Msa0658590:intron 40.0%
TGCAAATCTTTCTCGAGGTT+GGG + chr4_3:68812700-68812719 Msa0658590:intron 40.0%
ATTCTGAGTTGTCTTTCCCT+TGG + chr4_3:68812725-68812744 Msa0658590:intron 40.0%
!!! AAAGTTTTTAGGATGAGGGG+AGG - chr4_3:68812759-68812778 None:intergenic 40.0%
!! CTTGACTCAGAAAAGTGCTT+TGG + chr4_3:68813496-68813515 Msa0658590:intron 40.0%
ATTAGTATACCGTGCTTCGA+AGG - chr4_3:68813549-68813568 None:intergenic 40.0%
CCTGCAAAACAGTAAAAGAG+GGG - chr4_3:68813723-68813742 None:intergenic 40.0%
AGCTTCCACAACTTATTCGT+CGG + chr4_3:68813791-68813810 Msa0658590:CDS 40.0%
ACATGATATCCAGAAAACCC+AGG - chr4_3:68813971-68813990 None:intergenic 40.0%
TTCATATAGGGCAGTAGTTG+TGG + chr4_3:68814090-68814109 Msa0658590:intron 40.0%
TCATATAGGGCAGTAGTTGT+GGG + chr4_3:68814091-68814110 Msa0658590:intron 40.0%
TAGTTGTGGGTAAAATACCC+TGG + chr4_3:68814104-68814123 Msa0658590:intron 40.0%
TCAAAAGCTCGAATCAGAAG+AGG - chr4_3:68814145-68814164 None:intergenic 40.0%
GAATCAAGTGCAAAACCAAC+AGG - chr4_3:68814354-68814373 None:intergenic 40.0%
AGGTATATGACAAGAGCAGT+TGG + chr4_3:68814471-68814490 Msa0658590:intron 40.0%
ATCACACTTCTACGGAACTT+GGG - chr4_3:68814518-68814537 None:intergenic 40.0%
AATCACACTTCTACGGAACT+TGG - chr4_3:68814519-68814538 None:intergenic 40.0%
CTTTCCAGTATGTTTCCTTC+TGG + chr4_3:68814539-68814558 Msa0658590:CDS 40.0%
TTTGCCAGAAGGAAACATAC+TGG - chr4_3:68814546-68814565 None:intergenic 40.0%
GGAAGATGACATTACTAGTG+TGG + chr4_3:68814607-68814626 Msa0658590:CDS 40.0%
CTCACACACACTAAATAGTC+AGG + chr4_3:68814838-68814857 Msa0658590:intron 40.0%
TTCCAGAATAGCTGCAAGAA+CGG - chr4_3:68814949-68814968 None:intergenic 40.0%
! GCTGTGTTTTGTGCATTATG+CGG - chr4_3:68815152-68815171 None:intergenic 40.0%
AGCTACAATATCAGGGCAAA+TGG + chr4_3:68815195-68815214 Msa0658590:CDS 40.0%
! GATGAGCGTTTTCCATTTGA+TGG + chr4_3:68815290-68815309 Msa0658590:CDS 40.0%
GTAACAAGGTGACCATCAAA+TGG - chr4_3:68815305-68815324 None:intergenic 40.0%
TCAGCAACTGAAAATGACCT+CGG + chr4_3:68815412-68815431 Msa0658590:CDS 40.0%
CAAATAGCATGCACGTTACA+AGG + chr4_3:68815940-68815959 Msa0658590:intron 40.0%
GTACTTTGCCCTTATCTTAC+AGG + chr4_3:68816126-68816145 Msa0658590:intron 40.0%
AAGAATAAGGGGCAATCCTT+CGG - chr4_3:68816206-68816225 None:intergenic 40.0%
ATAATAACCACGCAACAACC+AGG - chr4_3:68816355-68816374 None:intergenic 40.0%
TGGTTGTTGCGTGGTTATTA+TGG + chr4_3:68816354-68816373 Msa0658590:CDS 40.0%
GGTTGTTGCGTGGTTATTAT+GGG + chr4_3:68816355-68816374 Msa0658590:CDS 40.0%
TGCGTGGTTATTATGGGTAA+AGG + chr4_3:68816361-68816380 Msa0658590:CDS 40.0%
AACTGTATTCCCTGCAGAAA+AGG - chr4_3:68816463-68816482 None:intergenic 40.0%
!! TGTTGACTCGTCAACTTTGA+GGG - chr4_3:68816496-68816515 None:intergenic 40.0%
!! TTGTTGACTCGTCAACTTTG+AGG - chr4_3:68816497-68816516 None:intergenic 40.0%
GACGAGTCAACAATAGCAAT+CGG + chr4_3:68816504-68816523 Msa0658590:CDS 40.0%
ATACGTCTAGGCACAGAAAA+TGG + chr4_3:68816603-68816622 Msa0658590:CDS 40.0%
TTCACCTCCAACATAGTTAG+AGG - chr4_3:68816652-68816671 None:intergenic 40.0%
!!! TGGTGATTTTTTCCTTCACC+TGG + chr4_3:68816805-68816824 Msa0658590:three_prime_UTR 40.0%
!!! GGTGATTTTTTCCTTCACCT+GGG + chr4_3:68816806-68816825 Msa0658590:three_prime_UTR 40.0%
! GATTGAATTTTCCCAGGTGA+AGG - chr4_3:68816820-68816839 None:intergenic 40.0%
CTGTCTCAGTAACTAATGCA+AGG - chr4_3:68816858-68816877 None:intergenic 40.0%
!! CAAAGGAGTACTTAGAACCA+GGG - chr4_3:68816890-68816909 None:intergenic 40.0%
!! ACAAAGGAGTACTTAGAACC+AGG - chr4_3:68816891-68816910 None:intergenic 40.0%
!! CTGGTTTGATGATGCAGTTG+TGG - chr4_3:68809523-68809542 None:intergenic 45.0%
TCATCAAACCAGAGCAACCA+TGG + chr4_3:68809531-68809550 Msa0658590:exon 45.0%
CATCAAACCAGAGCAACCAT+GGG + chr4_3:68809532-68809551 Msa0658590:exon 45.0%
ATGATGCAGGCAATGGTGTT+CGG - chr4_3:68809777-68809796 None:intergenic 45.0%
TGAATGCCAAGCAAAGTTCC+CGG - chr4_3:68810109-68810128 None:intergenic 45.0%
! ATTTTTCGCGGATGCAGCTT+AGG + chr4_3:68810130-68810149 Msa0658590:CDS 45.0%
GGGAAGGCCTATATTAAGGA+AGG - chr4_3:68810410-68810429 None:intergenic 45.0%
TAGCGGGAAGGCCTATATTA+AGG - chr4_3:68810414-68810433 None:intergenic 45.0%
CCGTTCCCATTTCAAACCAA+TGG - chr4_3:68810608-68810627 None:intergenic 45.0%
AATATCAGGGGATCTCAGTC+AGG + chr4_3:68810655-68810674 Msa0658590:intron 45.0%
CATATAGCCCTTGAAGTTGG+AGG + chr4_3:68811033-68811052 Msa0658590:intron 45.0%
CAATGACTCCTCCAACTTCA+AGG - chr4_3:68811044-68811063 None:intergenic 45.0%
CTTGAAGTTGGAGGAGTCAT+TGG + chr4_3:68811042-68811061 Msa0658590:intron 45.0%
ATAGGTTCCTCCCCTATTCT+TGG + chr4_3:68811689-68811708 Msa0658590:intron 45.0%
GGTGTATAGTCTCGAGCAAT+TGG - chr4_3:68811888-68811907 None:intergenic 45.0%
!! GTGATCCTGCTTTTGTGGAT+TGG - chr4_3:68811909-68811928 None:intergenic 45.0%
CATGAAGCACAACATTTCCC+AGG + chr4_3:68812175-68812194 Msa0658590:CDS 45.0%
! TTCCCAGGATGCCGTTTAAA+AGG + chr4_3:68812190-68812209 Msa0658590:CDS 45.0%
! TCCCAGGATGCCGTTTAAAA+GGG + chr4_3:68812191-68812210 Msa0658590:CDS 45.0%
! TCCCTTTTAAACGGCATCCT+GGG - chr4_3:68812195-68812214 None:intergenic 45.0%
! TTCCCTTTTAAACGGCATCC+TGG - chr4_3:68812196-68812215 None:intergenic 45.0%
AGTGTACCATCTCCACTACA+CGG - chr4_3:68812286-68812305 None:intergenic 45.0%
TGGAGATGGTACACTTCGTA+AGG + chr4_3:68812291-68812310 Msa0658590:CDS 45.0%
! TTCGTAAGGCACCTGATATG+TGG + chr4_3:68812305-68812324 Msa0658590:CDS 45.0%
TACCATTTCCGCCACATATC+AGG - chr4_3:68812319-68812338 None:intergenic 45.0%
TTTCTGCAGGAATTCAGGGA+TGG + chr4_3:68812404-68812423 Msa0658590:intron 45.0%
TTCTGCAGGAATTCAGGGAT+GGG + chr4_3:68812405-68812424 Msa0658590:intron 45.0%
GCAAATCTTTCTCGAGGTTG+GGG + chr4_3:68812701-68812720 Msa0658590:intron 45.0%
CAAATCTTTCTCGAGGTTGG+GGG + chr4_3:68812702-68812721 Msa0658590:intron 45.0%
AGTTATCTGGCATGGCGAAT+TGG + chr4_3:68812893-68812912 Msa0658590:intron 45.0%
ACTCAAAATCGGGGGAAGAA+TGG + chr4_3:68813369-68813388 Msa0658590:CDS 45.0%
AAATGAAGCTGTGGTTGCAG+AGG + chr4_3:68813423-68813442 Msa0658590:CDS 45.0%
CGTGCTTCGAAGGTAATTAG+CGG - chr4_3:68813539-68813558 None:intergenic 45.0%
CGCTAATTACCTTCGAAGCA+CGG + chr4_3:68813537-68813556 Msa0658590:intron 45.0%
! CCCCTCTTTTACTGTTTTGC+AGG + chr4_3:68813720-68813739 Msa0658590:intron 45.0%
ACCTTCCATTTCTTGAGACC+TGG - chr4_3:68813817-68813836 None:intergenic 45.0%
!!! TAGTGGATTCCTGGGTTTTC+TGG + chr4_3:68813959-68813978 Msa0658590:intron 45.0%
! TCAGAAGAGGCATAACTACC+AGG - chr4_3:68814132-68814151 None:intergenic 45.0%
GCGAGGTTACATGCTAAAGT+TGG - chr4_3:68814330-68814349 None:intergenic 45.0%
ACGGAACTTGGGAACATCTT+TGG - chr4_3:68814507-68814526 None:intergenic 45.0%
TCCTTCTGGCAAATGCTATC+AGG + chr4_3:68814553-68814572 Msa0658590:CDS 45.0%
TCCTGATAGCATTTGCCAGA+AGG - chr4_3:68814557-68814576 None:intergenic 45.0%
GGCAAATGCTATCAGGATCT+TGG + chr4_3:68814560-68814579 Msa0658590:CDS 45.0%
AGCACTAGAGAATCCTGTGA+TGG + chr4_3:68814658-68814677 Msa0658590:CDS 45.0%
ACTAGAGAATCCTGTGATGG+AGG + chr4_3:68814661-68814680 Msa0658590:CDS 45.0%
!! TTCCTCTAGAGCATTGCATG+AGG + chr4_3:68814708-68814727 Msa0658590:CDS 45.0%
ATCCTCATGCAATGCTCTAG+AGG - chr4_3:68814713-68814732 None:intergenic 45.0%
ATGCCTCATGATCAGAACAC+TGG + chr4_3:68814734-68814753 Msa0658590:CDS 45.0%
TTGCAGCACAGCAATGAAGA+AGG - chr4_3:68814762-68814781 None:intergenic 45.0%
CAAAAAGTTTCTCCTCTGCC+AGG + chr4_3:68814779-68814798 Msa0658590:CDS 45.0%
TTCCGTTCTTGCAGCTATTC+TGG + chr4_3:68814944-68814963 Msa0658590:intron 45.0%
ACCTAGCAAACAGAGTCTTG+AGG + chr4_3:68814971-68814990 Msa0658590:CDS 45.0%
TCCTCAAGACTCTGTTTGCT+AGG - chr4_3:68814975-68814994 None:intergenic 45.0%
GTCCTCTAACACGTGAAGAA+CGG + chr4_3:68815105-68815124 Msa0658590:CDS 45.0%
TTCCGTTCTTCACGTGTTAG+AGG - chr4_3:68815110-68815129 None:intergenic 45.0%
ACGTGAAGAACGGAATTCTG+AGG + chr4_3:68815115-68815134 Msa0658590:CDS 45.0%
TGCACAAAACACAGCAGAGA+AGG + chr4_3:68815157-68815176 Msa0658590:CDS 45.0%
CAATATCAGGGCAAATGGAG+AGG + chr4_3:68815200-68815219 Msa0658590:CDS 45.0%
CTATGTCTCCAAGTCAGTCA+AGG + chr4_3:68815361-68815380 Msa0658590:CDS 45.0%
CAACTGAAAATGACCTCGGT+TGG + chr4_3:68815416-68815435 Msa0658590:CDS 45.0%
AAACATCTTCATGCCAACCG+AGG - chr4_3:68815432-68815451 None:intergenic 45.0%
GAAAGACAAACAGCACGAGA+AGG + chr4_3:68816148-68816167 Msa0658590:CDS 45.0%
! GATGATATCCGGAAAGCACA+TGG - chr4_3:68816184-68816203 None:intergenic 45.0%
GCAATCCTTCGGATGATATC+CGG - chr4_3:68816195-68816214 None:intergenic 45.0%
AATTATACAGGCATCTCCCG+AGG + chr4_3:68816243-68816262 Msa0658590:CDS 45.0%
! GATTTTGCTGATGCCGAGTT+TGG + chr4_3:68816307-68816326 Msa0658590:CDS 45.0%
! TGATGCCGAGTTTGGTGAAA+AGG + chr4_3:68816315-68816334 Msa0658590:CDS 45.0%
! TGCTGCCTTTTCACCAAACT+CGG - chr4_3:68816323-68816342 None:intergenic 45.0%
AAGGCAGCAAACTTATTGCC+TGG + chr4_3:68816334-68816353 Msa0658590:CDS 45.0%
! CGGCATTTTCCTTTTCTGCA+GGG + chr4_3:68816451-68816470 Msa0658590:intron 45.0%
CAACAATAGCAATCGGATGC+TGG + chr4_3:68816511-68816530 Msa0658590:CDS 45.0%
AATAGCAATCGGATGCTGGA+GGG + chr4_3:68816515-68816534 Msa0658590:CDS 45.0%
GCACAGAAAATGGCTCTTCT+GGG + chr4_3:68816613-68816632 Msa0658590:CDS 45.0%
AAAGCTGCTGTGAGTTAGAG+AGG + chr4_3:68816717-68816736 Msa0658590:exon 45.0%
AAGCTGCTGTGAGTTAGAGA+GGG + chr4_3:68816718-68816737 Msa0658590:exon 45.0%
TACTTAGAACCAGGGAGTCA+GGG - chr4_3:68816882-68816901 None:intergenic 45.0%
! AACCTCGTCGTTAGTTTCGA+AGG + chr4_3:68817053-68817072 Msa0658590:three_prime_UTR 45.0%
!!! AATATTTTACATATATTTTA+GGG + chr4_3:68812479-68812498 Msa0658590:intron 5.0%
GATAAGGAAGGGTCTGGATC+TGG - chr4_3:68809628-68809647 None:intergenic 50.0%
GAATGCCAAGCAAAGTTCCC+GGG - chr4_3:68810108-68810127 None:intergenic 50.0%
CTCCGAGAAGCGAAAAAAGC+AGG - chr4_3:68810254-68810273 None:intergenic 50.0%
TGGGAACGGAGTTGACAAGT+TGG + chr4_3:68810619-68810638 Msa0658590:intron 50.0%
ACAATGCACGTGCATGAGGA+TGG - chr4_3:68810817-68810836 None:intergenic 50.0%
CTGAATGGTTCAGTACCCGT+AGG + chr4_3:68811397-68811416 Msa0658590:intron 50.0%
TGCACATCCAAGAATAGGGG+AGG - chr4_3:68811699-68811718 None:intergenic 50.0%
!! GTTTTAGTGTGTGCTGCACC+AGG + chr4_3:68811850-68811869 Msa0658590:intron 50.0%
!! AGGCAGTGATCCTGCTTTTG+TGG - chr4_3:68811914-68811933 None:intergenic 50.0%
AAAGCAGGATCACTGCCTGA+TGG + chr4_3:68811916-68811935 Msa0658590:CDS 50.0%
AGGATCACTGCCTGATGGAA+TGG + chr4_3:68811921-68811940 Msa0658590:CDS 50.0%
GTGTACCATCTCCACTACAC+GGG - chr4_3:68812285-68812304 None:intergenic 50.0%
! GTAAGGCACCTGATATGTGG+CGG + chr4_3:68812308-68812327 Msa0658590:CDS 50.0%
! CACCTGATATGTGGCGGAAA+TGG + chr4_3:68812314-68812333 Msa0658590:CDS 50.0%
AGGAATTCAGGGATGGGACA+AGG + chr4_3:68812411-68812430 Msa0658590:intron 50.0%
GGAATTCAGGGATGGGACAA+GGG + chr4_3:68812412-68812431 Msa0658590:intron 50.0%
AGGGGAGGCTATCATTCCAA+GGG - chr4_3:68812744-68812763 None:intergenic 50.0%
TTGAGCCTCAAGGAGTAGAG+TGG + chr4_3:68813155-68813174 Msa0658590:intron 50.0%
AGTCAAGCCTGCAACTAGCA+GGG - chr4_3:68813483-68813502 None:intergenic 50.0%
! CTGTTTTGCAGGTTTTGCGG+AGG + chr4_3:68813731-68813750 Msa0658590:intron 50.0%
GCCAGGTCTCAAGAAATGGA+AGG + chr4_3:68813813-68813832 Msa0658590:CDS 50.0%
GCTCCAGTGTTCTGATCATG+AGG - chr4_3:68814740-68814759 None:intergenic 50.0%
CATATGAGACTACCTGGCAG+AGG - chr4_3:68814794-68814813 None:intergenic 50.0%
TGTGTGAGAGAGAGAGAGAG+AGG - chr4_3:68814826-68814845 None:intergenic 50.0%
AGTCGTCAAAGCAGTTCCAG+AGG + chr4_3:68815037-68815056 Msa0658590:CDS 50.0%
AACACAGCAGAGAAGGTTCC+AGG + chr4_3:68815164-68815183 Msa0658590:CDS 50.0%
GTTGCGTTGAACTTCTCGGT+TGG + chr4_3:68815389-68815408 Msa0658590:CDS 50.0%
AGACAAACAGCACGAGAAGG+TGG + chr4_3:68816151-68816170 Msa0658590:CDS 50.0%
GCTCTTCACCATGTGCTTTC+CGG + chr4_3:68816173-68816192 Msa0658590:CDS 50.0%
GCTTTCCGGATATCATCCGA+AGG + chr4_3:68816187-68816206 Msa0658590:CDS 50.0%
AGAAGACGCTTGAAGTCCTC+GGG - chr4_3:68816262-68816281 None:intergenic 50.0%
CAGAAGACGCTTGAAGTCCT+CGG - chr4_3:68816263-68816282 None:intergenic 50.0%
CTTATTGCCTGGTTGTTGCG+TGG + chr4_3:68816345-68816364 Msa0658590:CDS 50.0%
! GCGGCATTTTCCTTTTCTGC+AGG + chr4_3:68816450-68816469 Msa0658590:intron 50.0%
CAATAGCAATCGGATGCTGG+AGG + chr4_3:68816514-68816533 Msa0658590:CDS 50.0%
ATAGCAATCGGATGCTGGAG+GGG + chr4_3:68816516-68816535 Msa0658590:CDS 50.0%
GTCCATTGCAGAGACCATCA+CGG - chr4_3:68816556-68816575 None:intergenic 50.0%
GGCACAGAAAATGGCTCTTC+TGG + chr4_3:68816612-68816631 Msa0658590:CDS 50.0%
AGAAAATGGCTCTTCTGGGC+AGG + chr4_3:68816617-68816636 Msa0658590:CDS 50.0%
CTATGTTGGAGGTGAAGCAC+AGG + chr4_3:68816656-68816675 Msa0658590:CDS 50.0%
GTACTTAGAACCAGGGAGTC+AGG - chr4_3:68816883-68816902 None:intergenic 50.0%
TGCCTTCGAAACTAACGACG+AGG - chr4_3:68817058-68817077 None:intergenic 50.0%
! GATGCAGTTGTGGCGCGTTT+TGG - chr4_3:68809513-68809532 None:intergenic 55.0%
ACCAGAGCAACCATGGGTAG+AGG + chr4_3:68809538-68809557 Msa0658590:exon 55.0%
TCCTCTACCCATGGTTGCTC+TGG - chr4_3:68809542-68809561 None:intergenic 55.0%
GAGCAACCATGGGTAGAGGA+AGG + chr4_3:68809542-68809561 Msa0658590:exon 55.0%
TCGTGACCTTCCTCTACCCA+TGG - chr4_3:68809551-68809570 None:intergenic 55.0%
TCGGAGGATAAGGAAGGGTC+TGG - chr4_3:68809634-68809653 None:intergenic 55.0%
TGCTGAAGGAGGTGAGACAG+AGG + chr4_3:68810059-68810078 Msa0658590:CDS 55.0%
GAGGTGAGACAGAGGCGATT+CGG + chr4_3:68810067-68810086 Msa0658590:CDS 55.0%
GCAAAGTTCCCGGGATACCA+GGG - chr4_3:68810099-68810118 None:intergenic 55.0%
AGCAAAGTTCCCGGGATACC+AGG - chr4_3:68810100-68810119 None:intergenic 55.0%
GGTATCCCGGGAACTTTGCT+TGG + chr4_3:68810100-68810119 Msa0658590:CDS 55.0%
! GATGTCCCGTGTAGTGGAGA+TGG + chr4_3:68812277-68812296 Msa0658590:CDS 55.0%
TTTGTATCCCCTGCGAGCAG+AGG - chr4_3:68812673-68812692 None:intergenic 55.0%
GAGGGGAGGCTATCATTCCA+AGG - chr4_3:68812745-68812764 None:intergenic 55.0%
AGCTGCCACTCTACTCCTTG+AGG - chr4_3:68813163-68813182 None:intergenic 55.0%
TGTGAAGCCCTGCTAGTTGC+AGG + chr4_3:68813473-68813492 Msa0658590:intron 55.0%
GAGTCAAGCCTGCAACTAGC+AGG - chr4_3:68813484-68813503 None:intergenic 55.0%
! TTGCAGGTTTTGCGGAGGTG+TGG + chr4_3:68813736-68813755 Msa0658590:intron 55.0%
CCTGGCCGACGAATAAGTTG+TGG - chr4_3:68813799-68813818 None:intergenic 55.0%
CCACAACTTATTCGTCGGCC+AGG + chr4_3:68813796-68813815 Msa0658590:CDS 55.0%
GTCGGCCAGGTCTCAAGAAA+TGG + chr4_3:68813809-68813828 Msa0658590:CDS 55.0%
GGGTAAAATACCCTGGAGCC+TGG + chr4_3:68814111-68814130 Msa0658590:intron 55.0%
GGCATAACTACCAGGCTCCA+GGG - chr4_3:68814124-68814143 None:intergenic 55.0%
AGGCATAACTACCAGGCTCC+AGG - chr4_3:68814125-68814144 None:intergenic 55.0%
GCATGTAACCTCGCACCTGT+TGG + chr4_3:68814336-68814355 Msa0658590:intron 55.0%
GTGCAAAACCAACAGGTGCG+AGG - chr4_3:68814347-68814366 None:intergenic 55.0%
TCAGCAGACTCCTCCATCAC+AGG - chr4_3:68814674-68814693 None:intergenic 55.0%
! TGTGATGGAGGAGTCTGCTG+AGG + chr4_3:68814673-68814692 Msa0658590:CDS 55.0%
GGACTTCAAGCGTCTTCTGC+AGG + chr4_3:68816264-68816283 Msa0658590:CDS 55.0%
AATCGGATGCTGGAGGGGTA+GGG + chr4_3:68816521-68816540 Msa0658590:CDS 55.0%
GTCCGTGATGGTCTCTGCAA+TGG + chr4_3:68816551-68816570 Msa0658590:CDS 55.0%
AAATGGCTCTTCTGGGCAGG+TGG + chr4_3:68816620-68816639 Msa0658590:CDS 55.0%
AGGTGAAGCACAGGCTGTAC+AGG + chr4_3:68816665-68816684 Msa0658590:CDS 55.0%
CGTGCATTCACTTCGCGCTG+AGG + chr4_3:68809948-68809967 Msa0658590:CDS 60.0%
TTCCCGGGATACCAGGGCAA+AGG - chr4_3:68810093-68810112 None:intergenic 60.0%
CTGTGCGATGTCCCGTGTAG+TGG + chr4_3:68812271-68812290 Msa0658590:CDS 60.0%
CAATCGGATGCTGGAGGGGT+AGG + chr4_3:68816520-68816539 Msa0658590:CDS 60.0%
TAGGGCGAGGTTGTCCGTGA+TGG + chr4_3:68816539-68816558 Msa0658590:CDS 60.0%
TGAGACAGTCCCTGACTCCC+TGG + chr4_3:68816870-68816889 Msa0658590:three_prime_UTR 60.0%
! AGGCGATTCGGCCTTTGCCC+TGG + chr4_3:68810079-68810098 Msa0658590:CDS 65.0%
CGGCCTTTGCCCTGGTATCC+CGG + chr4_3:68810087-68810106 Msa0658590:CDS 65.0%
GGCCTTTGCCCTGGTATCCC+GGG + chr4_3:68810088-68810107 Msa0658590:CDS 65.0%
TCCTGGCGTCCTCTGCTCGC+AGG + chr4_3:68812661-68812680 Msa0658590:intron 70.0%
CCTGGCGTCCTCTGCTCGCA+GGG + chr4_3:68812662-68812681 Msa0658590:intron 70.0%
CTGGCGTCCTCTGCTCGCAG+GGG + chr4_3:68812663-68812682 Msa0658590:intron 70.0%
GATGCTGGAGGGGTAGGGCG+AGG + chr4_3:68816526-68816545 Msa0658590:CDS 70.0%
CCCTGCGAGCAGAGGACGCC+AGG - chr4_3:68812665-68812684 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 68809504 68817107 68809504 ID=Msa0658590;Name=Msa0658590
chr4_3 mRNA 68809504 68817107 68809504 ID=Msa0658590-mRNA-1;Parent=Msa0658590;Name=Msa0658590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=46|1|1|1|1|1|14|373|817
chr4_3 exon 68809504 68809812 68809504 ID=Msa0658590-mRNA-1:exon:19985;Parent=Msa0658590-mRNA-1
chr4_3 exon 68809903 68809969 68809903 ID=Msa0658590-mRNA-1:exon:19986;Parent=Msa0658590-mRNA-1
chr4_3 exon 68810057 68810172 68810057 ID=Msa0658590-mRNA-1:exon:19987;Parent=Msa0658590-mRNA-1
chr4_3 exon 68811260 68811326 68811260 ID=Msa0658590-mRNA-1:exon:19988;Parent=Msa0658590-mRNA-1
chr4_3 exon 68811693 68811741 68811693 ID=Msa0658590-mRNA-1:exon:19989;Parent=Msa0658590-mRNA-1
chr4_3 exon 68811857 68811942 68811857 ID=Msa0658590-mRNA-1:exon:19990;Parent=Msa0658590-mRNA-1
chr4_3 exon 68812085 68812335 68812085 ID=Msa0658590-mRNA-1:exon:19991;Parent=Msa0658590-mRNA-1
chr4_3 exon 68812413 68812468 68812413 ID=Msa0658590-mRNA-1:exon:19992;Parent=Msa0658590-mRNA-1
chr4_3 exon 68813359 68813444 68813359 ID=Msa0658590-mRNA-1:exon:19993;Parent=Msa0658590-mRNA-1
chr4_3 exon 68813742 68813834 68813742 ID=Msa0658590-mRNA-1:exon:19994;Parent=Msa0658590-mRNA-1
chr4_3 exon 68814473 68814800 68814473 ID=Msa0658590-mRNA-1:exon:19995;Parent=Msa0658590-mRNA-1
chr4_3 exon 68814958 68815451 68814958 ID=Msa0658590-mRNA-1:exon:19996;Parent=Msa0658590-mRNA-1
chr4_3 exon 68816148 68816382 68816148 ID=Msa0658590-mRNA-1:exon:19997;Parent=Msa0658590-mRNA-1
chr4_3 exon 68816472 68817107 68816472 ID=Msa0658590-mRNA-1:exon:19998;Parent=Msa0658590-mRNA-1
chr4_3 five_prime_UTR 68809504 68809549 68809504 ID=Msa0658590-mRNA-1:five_prime_utr;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68809550 68809812 68809550 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68809903 68809969 68809903 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68810057 68810172 68810057 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68811260 68811326 68811260 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68811693 68811741 68811693 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68811857 68811942 68811857 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68812085 68812335 68812085 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68812413 68812468 68812413 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68813359 68813444 68813359 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68813742 68813834 68813742 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68814473 68814800 68814473 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68814958 68815451 68814958 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68816148 68816382 68816148 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 CDS 68816472 68816734 68816472 ID=Msa0658590-mRNA-1:cds;Parent=Msa0658590-mRNA-1
chr4_3 three_prime_UTR 68816735 68817107 68816735 ID=Msa0658590-mRNA-1:three_prime_utr;Parent=Msa0658590-mRNA-1
Gene Sequence

>Msa0658590

ATGGGTAGAGGAAGGTCACGAACTCAAAGAAAGGACTTTCGTCAAAACAGAGAAAACGTTTGGAAGCGTTCGAAACCAGATCCAGACCCTTCCTTATCCTCCGAAAATTCTCAAACTACTACTCATTGGACTCCTTTCTTGACTCAAAACCCTTCCTTTGATTCTTATTACAAGGAACAGTTAATTGTTGATCCACAAGAATGGGATCAATTCATCGCAGTTCTCCGAACACCATTGCCTGCATCATTTAGAATCAATTCTAGTAGTCAATTTGCTGATGATATTCGTTCCCAATTGGAAAATGATTTCGTGCATTCACTTCGCGCTGAGGTTGCTGAAGGAGGTGAGACAGAGGCGATTCGGCCTTTGCCCTGGTATCCCGGGAACTTTGCTTGGCATTCAAATTTTTCGCGGATGCAGCTTAGGAAGAATCAAACATTGGAGAGGTTCCACGAATTTTTAAAGCTAGAAAATGAAATTGGAAATATCACAAGACAGGAAGCTGTTAGTATGGTTCCTCCCCTATTCTTGGATGTGCATTCAGACCATTTTGTACTTGACATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTCGAGACTATACACCAATCCACAAAAGCAGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTTGATGTTAAAAGATGTAATCTTCTCATCCATCAAACAAAAAGAATGTCCACAGCCAACCTAATTGTTACTAATCATGAAGCACAACATTTCCCAGGATGCCGTTTAAAAGGGAATTATGAAAGAATGGAGTTAGATCACAATATTCACCAACTGTTATTTGATCGTGTTCTGTGCGATGTCCCGTGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATATGTGGCGGAAATGGAATTCAGGGATGGGACAAGGGCTTCACAGCCTACAAGTTTTAATTGCTATGCGAGGTTTATCTTTACTCAAAATCGGGGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAAAATGAAGCTGTGGTTGCAGAGGTTTTGCGGAGGTGTGGTGAGTCTGTCAAACTTGTTGACGTGTCTAGTGAGCTTCCACAACTTATTCGTCGGCCAGGTCTCAAGAAATGGAAGGTATATGACAAGAGCAGTTGGTTTGTCTCTTCCAAAGATGTTCCCAAGTTCCGTAGAAGTGTGATTCTTTCCAGTATGTTTCCTTCTGGCAAATGCTATCAGGATCTTGGCGATAGTAATTGTAATGTTGACATGGAAGATGACATTACTAGTGTGGAAAATGAAAAAACTGAAGATGGTATTGAAGCACTAGAGAATCCTGTGATGGAGGAGTCTGCTGAGGAAGTTTCAGATTTTCCTCTAGAGCATTGCATGAGGATAATGCCTCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTGCTGCAAAAAGTTTCTCCTCTGCCAGCTATTCTGGAAAAACCTAGCAAACAGAGTCTTGAGGATGCACAAGCACCGCACATGAATTCATCTGAAACTACACTTGAAGTCGTCAAAGCAGTTCCAGAGGAAAATGTGAATGATAATGTATCCCATACAGATGATTTGGAAGATAGTCCTCTAACACGTGAAGAACGGAATTCTGAGGAAACTGAAGAACCGCATAATGCACAAAACACAGCAGAGAAGGTTCCAGGTAAAAGAAAGCTACAATATCAGGGCAAATGGAGAGGTGTTGACCCTGTTGTCTTTTTTAAAGATGAAGCAATTGTTAACAGTATAAAGAATTTTTATGGAATCGATGAGCGTTTTCCATTTGATGGTCACCTTGTTACACGAAACATTGATAACAGTAATGCAAAAAGAATTTACTATGTCTCCAAGTCAGTCAAGGATATTGTTGCGTTGAACTTCTCGGTTGGTCAGCAACTGAAAATGACCTCGGTTGGCATGAAGATGTTTGAAAGACAAACAGCACGAGAAGGTGGCTCTTCACCATGTGCTTTCCGGATATCATCCGAAGGATTGCCCCTTATTCTTCCATACATAACCAAGCAAATTATACAGGCATCTCCCGAGGACTTCAAGCGTCTTCTGCAGGACAAAGATGTAAAATATTCAGATTTTGCTGATGCCGAGTTTGGTGAAAAGGCAGCAAACTTATTGCCTGGTTGTTGCGTGGTTATTATGGGTAAAGGGAATACAGTTGCAACAGAATCCCTCAAAGTTGACGAGTCAACAATAGCAATCGGATGCTGGAGGGGTAGGGCGAGGTTGTCCGTGATGGTCTCTGCAATGGACTGCCAAGAATTGCTTGCAAGACTTTTAATACGTCTAGGCACAGAAAATGGCTCTTCTGGGCAGGTGGACAATTCCTCTAACTATGTTGGAGGTGAAGCACAGGCTGTACAGGAGTTGAACGATAAAAGTGATAATGATTTGAAAGCTGCTGTGAGTTAG
Protein sequence

>Msa0658590

MGRGRSRTQRKDFRQNRENVWKRSKPDPDPSLSSENSQTTTHWTPFLTQNPSFDSYYKEQLIVDPQEWDQFIAVLRTPLPASFRINSSSQFADDIRSQLENDFVHSLRAEVAEGGETEAIRPLPWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLETIHQSTKAGSLPDGMVVANDLDVKRCNLLIHQTKRMSTANLIVTNHEAQHFPGCRLKGNYERMELDHNIHQLLFDRVLCDVPCSGDGTLRKAPDMWRKWNSGMGQGLHSLQVLIAMRGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGESVKLVDVSSELPQLIRRPGLKKWKVYDKSSWFVSSKDVPKFRRSVILSSMFPSGKCYQDLGDSNCNVDMEDDITSVENEKTEDGIEALENPVMEESAEEVSDFPLEHCMRIMPHDQNTGAFFIAVLQKVSPLPAILEKPSKQSLEDAQAPHMNSSETTLEVVKAVPEENVNDNVSHTDDLEDSPLTREERNSEETEEPHNAQNTAEKVPGKRKLQYQGKWRGVDPVVFFKDEAIVNSIKNFYGIDERFPFDGHLVTRNIDNSNAKRIYYVSKSVKDIVALNFSVGQQLKMTSVGMKMFERQTAREGGSSPCAFRISSEGLPLILPYITKQIIQASPEDFKRLLQDKDVKYSDFADAEFGEKAANLLPGCCVVIMGKGNTVATESLKVDESTIAIGCWRGRARLSVMVSAMDCQELLARLLIRLGTENGSSGQVDNSSNYVGGEAQAVQELNDKSDNDLKAAVS*