Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314420 | KAG6784528.1 | 84.392 | 378 | 46 | 5 | 1 | 378 | 1 | 365 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314420 | sp|Q9LT08|PSDE_ARATH | 70.370 | 378 | 42 | 5 | 1 | 378 | 1 | 308 | 1.12e-180 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047640 | Msa0314420 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0194170 | Msa0314420 | 0.835434 | 1.681597e-56 | -8.615850e-47 |
| Msa0274230 | Msa0314420 | 0.924797 | 4.357971e-90 | -8.615850e-47 |
| Msa0314420 | Msa0430060 | 0.804993 | 1.654115e-49 | -8.615850e-47 |
| Msa0314420 | Msa0430150 | 0.804073 | 2.573795e-49 | -8.615850e-47 |
| Msa0314420 | Msa0485510 | 0.812361 | 4.406780e-51 | -8.615850e-47 |
| Msa0314420 | Msa0544730 | 0.812151 | 4.898087e-51 | -8.615850e-47 |
| Msa0314420 | Msa0608270 | 0.812304 | 4.534159e-51 | -8.615850e-47 |
| Msa0314420 | Msa0648830 | 0.812832 | 3.476209e-51 | -8.615850e-47 |
| Msa0314420 | Msa0658590 | 0.801519 | 8.665151e-49 | -8.615850e-47 |
| Msa0314420 | Msa1074110 | 0.817429 | 3.312804e-52 | -8.615850e-47 |
| Msa0314420 | Msa1087350 | 0.896318 | 4.139916e-76 | -8.615850e-47 |
| Msa0314420 | Msa1132480 | 0.804018 | 2.641415e-49 | -8.615850e-47 |
| Msa0314420 | Msa1369890 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0314420 | Msa1393430 | 0.803701 | 3.074477e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314420 | MtrunA17_Chr2g0284651 | 100.000 | 178 | 0 | 0 | 201 | 378 | 132 | 309 | 5.28e-126 | 365 |
| Msa0314420 | MtrunA17_Chr2g0284651 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.28e-94 | 284 |
| Msa0314420 | MtrunA17_Chr1g0153761 | 98.876 | 178 | 2 | 0 | 201 | 378 | 136 | 313 | 6.39e-125 | 362 |
| Msa0314420 | MtrunA17_Chr1g0153761 | 96.350 | 137 | 4 | 1 | 1 | 136 | 4 | 140 | 2.45e-92 | 279 |
| Msa0314420 | MtrunA17_Chr8g0334331 | 52.381 | 105 | 45 | 3 | 29 | 130 | 58 | 160 | 6.94e-26 | 107 |
| Msa0314420 | MtrunA17_Chr3g0138921 | 52.381 | 105 | 45 | 3 | 29 | 130 | 92 | 194 | 1.32e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314420 | AT5G23540.1 | 70.370 | 378 | 42 | 5 | 1 | 378 | 1 | 308 | 0.0 | 506 |
| Msa0314420 | AT5G23540.2 | 67.683 | 328 | 37 | 4 | 51 | 378 | 1 | 259 | 8.17e-148 | 419 |
| Msa0314420 | AT1G71230.1 | 50.450 | 111 | 42 | 3 | 29 | 132 | 57 | 161 | 3.86e-26 | 108 |
| Msa0314420 | AT1G22920.1 | 49.038 | 104 | 50 | 2 | 29 | 130 | 57 | 159 | 1.48e-24 | 103 |
| Msa0314420 | AT1G22920.2 | 49.038 | 104 | 50 | 2 | 29 | 130 | 57 | 159 | 1.84e-24 | 103 |
| Msa0314420 | AT5G27607.1 | 89.286 | 28 | 3 | 0 | 104 | 131 | 78 | 105 | 3.22e-12 | 63.5 |
Find 116 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTTCCCATGGAGGTTA+TGG | 0.185250 | 2_4:+10169814 | Msa0314420:CDS |
| AACAGTCTGTTCATTAGTTT+TGG | 0.224880 | 2_4:-10172206 | None:intergenic |
| AACTTAGCACTTAGTTTCTT+TGG | 0.247885 | 2_4:+10172864 | Msa0314420:three_prime_UTR |
| TTAGGTTGTTTGCTCGCTTA+TGG | 0.255350 | 2_4:+10170802 | Msa0314420:intron |
| TTGAACAGCCTTGTTGTATT+TGG | 0.268596 | 2_4:-10172548 | None:intergenic |
| AGAGTTCAAACTTGGTATTT+TGG | 0.274285 | 2_4:+10170961 | Msa0314420:CDS |
| TTGAATACAGATGTATTCTT+TGG | 0.283103 | 2_4:+10172815 | Msa0314420:three_prime_UTR |
| GGTGTTCCCATGGAGGTTAT+GGG | 0.289500 | 2_4:+10169815 | Msa0314420:CDS |
| GATCCAATTCAAAGTGTTAA+AGG | 0.297544 | 2_4:+10171819 | Msa0314420:CDS |
| TAATTCTATTATTATATTGC+AGG | 0.300785 | 2_4:+10172916 | Msa0314420:three_prime_UTR |
| TTCATTCTTCCTGTAATTGA+TGG | 0.301331 | 2_4:-10172104 | None:intergenic |
| GGATTTGGCTGTTGGTTGTC+TGG | 0.310169 | 2_4:+10170329 | Msa0314420:CDS |
| ATTCCATAGCCATCAATTAC+AGG | 0.318521 | 2_4:+10172095 | Msa0314420:CDS |
| TTTCCTTTAACACTTTGAAT+TGG | 0.338465 | 2_4:-10171822 | None:intergenic |
| TATCATTCACATCCTGGATT+TGG | 0.349236 | 2_4:+10170314 | Msa0314420:CDS |
| AGACTTGTTCGGATGAATCT+AGG | 0.351262 | 2_4:-10169573 | None:intergenic |
| ATGCTCTTCGAGGTGCTTCT+TGG | 0.355935 | 2_4:-10172629 | None:intergenic |
| AGCCCAGATCCGATCTTCTT+GGG | 0.362520 | 2_4:-10170866 | None:intergenic |
| GAATCTAGGGTTGGAGAATC+TGG | 0.362906 | 2_4:-10169559 | None:intergenic |
| CTTGATATGCTCAAACAAAC+TGG | 0.363131 | 2_4:+10169959 | Msa0314420:CDS |
| CAGCCCAGATCCGATCTTCT+TGG | 0.372753 | 2_4:-10170867 | None:intergenic |
| TAATATTTCTATCTCTGATT+CGG | 0.376148 | 2_4:-10169361 | None:intergenic |
| CTCTTTAGGCATTGATCCAT+GGG | 0.379104 | 2_4:+10172056 | Msa0314420:intron |
| CACATCCTGGATTTGGCTGT+TGG | 0.391614 | 2_4:+10170321 | Msa0314420:CDS |
| TCTAACATCGTTCAAACTCT+TGG | 0.396438 | 2_4:+10172670 | Msa0314420:CDS |
| TCTGAATAAACCATCCATTC+AGG | 0.402001 | 2_4:+10171932 | Msa0314420:CDS |
| AAGGCAGACAACTTCCAATC+TGG | 0.404764 | 2_4:+10171905 | Msa0314420:CDS |
| TCTCTTTAGGCATTGATCCA+TGG | 0.408154 | 2_4:+10172055 | Msa0314420:intron |
| TTCCCCAAGAAGATCGGATC+TGG | 0.411677 | 2_4:+10170863 | Msa0314420:CDS |
| TTTGATGCTTGGAGAATTTG+TGG | 0.413116 | 2_4:+10169838 | Msa0314420:CDS |
| ATTTGCTATTGCAAGTTTCT+CGG | 0.414356 | 2_4:-10172590 | None:intergenic |
| AATATAGTCTGAGAATAATC+AGG | 0.430400 | 2_4:-10172792 | None:intergenic |
| AGATTGGAAGTTGTCTGCCT+TGG | 0.433636 | 2_4:-10171903 | None:intergenic |
| CTGGACCGTCTGATCTTGAT+TGG | 0.437609 | 2_4:-10170940 | None:intergenic |
| CATTGATCCATGGGTTGAAC+CGG | 0.440732 | 2_4:+10172065 | Msa0314420:CDS |
| CAAAGAATGTTCGCAGGTGC+AGG | 0.448769 | 2_4:+10169514 | Msa0314420:CDS |
| GGCTGGTATCATTCACATCC+TGG | 0.450530 | 2_4:+10170308 | Msa0314420:CDS |
| GAGGTTATGGGTTTGATGCT+TGG | 0.451218 | 2_4:+10169827 | Msa0314420:CDS |
| TTTGCTATTGCAAGTTTCTC+GGG | 0.452950 | 2_4:-10172589 | None:intergenic |
| ATAGAAAACACGTTACATAA+AGG | 0.454862 | 2_4:+10172968 | Msa0314420:three_prime_UTR |
| ATGGTTAATCTAGCATGTTA+AGG | 0.470634 | 2_4:+10172740 | Msa0314420:three_prime_UTR |
| AGTATACCAGGTAATATCAA+TGG | 0.472239 | 2_4:-10172892 | None:intergenic |
| AAGCATACAGTGCATACTAT+AGG | 0.475426 | 2_4:-10170837 | None:intergenic |
| AATTTGAGACATGCTCTTCG+AGG | 0.480365 | 2_4:-10172639 | None:intergenic |
| TGCAGACCAGAGATGGTTGT+TGG | 0.483028 | 2_4:+10170287 | Msa0314420:intron |
| GCAATGCCACAGAGTGGAAC+TGG | 0.486016 | 2_4:+10169893 | Msa0314420:CDS |
| CTTCCTGTAATTGATGGCTA+TGG | 0.489960 | 2_4:-10172098 | None:intergenic |
| AACTAATGAACAGACTGTTC+AGG | 0.493790 | 2_4:+10172210 | Msa0314420:CDS |
| TACCAGCCAACAACCATCTC+TGG | 0.496380 | 2_4:-10170293 | None:intergenic |
| GGATGAGATGTAGACTTGTT+CGG | 0.496633 | 2_4:-10169584 | None:intergenic |
| ATTCTTTGGACGAGCTGAAA+AGG | 0.501523 | 2_4:+10172829 | Msa0314420:three_prime_UTR |
| TTTATTCAGATGTCCCAGAT+TGG | 0.501681 | 2_4:-10171919 | None:intergenic |
| TGAATCGATGAATCTGTGTT+GGG | 0.502473 | 2_4:-10169477 | None:intergenic |
| GCAGGTGCAGGTGGAGCCCT+AGG | 0.507158 | 2_4:+10169526 | Msa0314420:CDS |
| AAACTTGCAATAGCAAATGT+TGG | 0.510302 | 2_4:+10172595 | Msa0314420:CDS |
| GTGACTCCATTGATATTACC+TGG | 0.511607 | 2_4:+10172886 | Msa0314420:three_prime_UTR |
| CTTAGTTTCCCCAAGAAGAT+CGG | 0.514901 | 2_4:+10170857 | Msa0314420:CDS |
| TGTCCAAGCATCATTGTCTG+TGG | 0.515753 | 2_4:-10171876 | None:intergenic |
| GACTTGTTCGGATGAATCTA+GGG | 0.516752 | 2_4:-10169572 | None:intergenic |
| GACAACCAACAGCCAAATCC+AGG | 0.516917 | 2_4:-10170326 | None:intergenic |
| GTTTGAGTTACGCACCTGAA+TGG | 0.524957 | 2_4:-10171946 | None:intergenic |
| GGACTGATGGCTTGACACTT+AGG | 0.529421 | 2_4:+10172167 | Msa0314420:CDS |
| CATCAAACCCATAACCTCCA+TGG | 0.530750 | 2_4:-10169822 | None:intergenic |
| GAGAGCCGTGGCTGTAGTTG+TGG | 0.532971 | 2_4:+10171797 | Msa0314420:CDS |
| AATAATGCCGGTTCAACCCA+TGG | 0.533545 | 2_4:-10172072 | None:intergenic |
| AAGTCGATGGCGAAGTAAAG+AGG | 0.542405 | 2_4:-10169414 | None:intergenic |
| TTAACAATAATAGGTAGGGC+TGG | 0.544991 | 2_4:+10169794 | Msa0314420:intron |
| AGGTAGGGCTGGTGTTCCCA+TGG | 0.547536 | 2_4:+10169805 | Msa0314420:intron |
| AGGCAGACAACTTCCAATCT+GGG | 0.548081 | 2_4:+10171906 | Msa0314420:CDS |
| GAGTTACGCACCTGAATGGA+TGG | 0.549238 | 2_4:-10171942 | None:intergenic |
| TGTTCGGATGAATCTAGGGT+TGG | 0.556841 | 2_4:-10169568 | None:intergenic |
| ACAGATTCATCGATTCATCA+TGG | 0.557263 | 2_4:+10169483 | Msa0314420:exon |
| GACGGTCCAGAGTTCAAACT+TGG | 0.560520 | 2_4:+10170953 | Msa0314420:CDS |
| GACCAGAGATGGTTGTTGGC+TGG | 0.560653 | 2_4:+10170291 | Msa0314420:intron |
| ACCGTCTGATCTTGATTGGA+CGG | 0.562401 | 2_4:-10170936 | None:intergenic |
| AATCCACAGACAATGATGCT+TGG | 0.566917 | 2_4:+10171873 | Msa0314420:CDS |
| AAAATACCAAGTTTGAACTC+TGG | 0.567421 | 2_4:-10170959 | None:intergenic |
| TCCCCAAGAAGATCGGATCT+GGG | 0.573423 | 2_4:+10170864 | Msa0314420:CDS |
| ATGAATCGATGAATCTGTGT+TGG | 0.575503 | 2_4:-10169478 | None:intergenic |
| AGAATGTTCGCAGGTGCAGG+TGG | 0.582287 | 2_4:+10169517 | Msa0314420:CDS |
| AGGGTTGGAGAATCTGGTGG+TGG | 0.583084 | 2_4:-10169553 | None:intergenic |
| AATCTGGTGGTGGATGACCT+AGG | 0.583160 | 2_4:-10169543 | None:intergenic |
| ATCAAACCCATAACCTCCAT+GGG | 0.586388 | 2_4:-10169821 | None:intergenic |
| AATTCAAAGTGTTAAAGGAA+AGG | 0.587669 | 2_4:+10171824 | Msa0314420:CDS |
| ATCTGGTGGTGGATGACCTA+GGG | 0.587858 | 2_4:-10169542 | None:intergenic |
| ATACAACAAGGCTGTTCAAG+AGG | 0.587968 | 2_4:+10172552 | Msa0314420:CDS |
| ATTGTGTTGCAGACCAGAGA+TGG | 0.597906 | 2_4:+10170280 | Msa0314420:intron |
| TAATAGAATTAAAGTATACC+AGG | 0.598716 | 2_4:-10172904 | None:intergenic |
| TGGAAATTCCGCCTTAACTG+CGG | 0.605950 | 2_4:+10170991 | Msa0314420:CDS |
| TTCATCGATTCATCATGGAA+AGG | 0.606178 | 2_4:+10169488 | Msa0314420:exon |
| ATATGCTCAAACAAACTGGA+AGG | 0.606861 | 2_4:+10169963 | Msa0314420:CDS |
| GCCCAGATCCGATCTTCTTG+GGG | 0.610918 | 2_4:-10170865 | None:intergenic |
| TCAAAGTGTTAAAGGAAAGG+TGG | 0.613319 | 2_4:+10171827 | Msa0314420:CDS |
| GGGGAAGACCGCAGTTAAGG+CGG | 0.615152 | 2_4:-10170999 | None:intergenic |
| TGGCTATGGAATAATAATGC+CGG | 0.615459 | 2_4:-10172084 | None:intergenic |
| AGGCTTCAAAGAATGTTCGC+AGG | 0.619756 | 2_4:+10169508 | Msa0314420:CDS |
| AGTCGATGGCGAAGTAAAGA+GGG | 0.620664 | 2_4:-10169413 | None:intergenic |
| TTGGACGGTACATACGTGGT+TGG | 0.623303 | 2_4:-10170921 | None:intergenic |
| TAGGGCTGGTGTTCCCATGG+AGG | 0.627642 | 2_4:+10169808 | Msa0314420:CDS |
| AAGCATCTTGAGAAGAGCGA+GGG | 0.629521 | 2_4:-10169605 | None:intergenic |
| GGCTTTGAATCAGAGAGCCG+TGG | 0.631150 | 2_4:+10171785 | Msa0314420:CDS |
| TGGATCCACAACTACAGCCA+CGG | 0.635765 | 2_4:-10171802 | None:intergenic |
| CTTAGCTACCAAATACAACA+AGG | 0.639370 | 2_4:+10172540 | Msa0314420:CDS |
| TGTTGACATCAATACACAGC+AGG | 0.639510 | 2_4:+10170352 | Msa0314420:CDS |
| GTTGGCTGCATGCAGCCACA+AGG | 0.646321 | 2_4:-10170903 | None:intergenic |
| TTGATTGGACGGTACATACG+TGG | 0.646438 | 2_4:-10170925 | None:intergenic |
| ACCGTCCAATCAAGATCAGA+CGG | 0.648071 | 2_4:+10170935 | Msa0314420:CDS |
| TAAGCATCTTGAGAAGAGCG+AGG | 0.654674 | 2_4:-10169606 | None:intergenic |
| TGCGTGCAGTCACAACCTTG+TGG | 0.656939 | 2_4:+10170888 | Msa0314420:CDS |
| TTACAGGAAGAATGAACTCG+AGG | 0.664198 | 2_4:+10172111 | Msa0314420:CDS |
| GAATCGATGAATCTGTGTTG+GGG | 0.664991 | 2_4:-10169476 | None:intergenic |
| CTTCTCAAGATGCTTAAACA+CGG | 0.678967 | 2_4:+10169613 | Msa0314420:CDS |
| TCTAGGGTTGGAGAATCTGG+TGG | 0.686607 | 2_4:-10169556 | None:intergenic |
| CTAACACCAGTTCCACTCTG+TGG | 0.696288 | 2_4:-10169899 | None:intergenic |
| TGATGCTTGGACAAGAACCA+AGG | 0.701272 | 2_4:+10171886 | Msa0314420:CDS |
| GTGTTTGCAATGCCACAGAG+TGG | 0.719761 | 2_4:+10169887 | Msa0314420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTTTAAAAAAATAAAAT+CGG | + | chr2_4:10171187-10171206 | Msa0314420:intron | 10.0% |
| !!! | GTGTTTTTTTTAACAATAAT+AGG | + | chr2_4:10169785-10169804 | Msa0314420:intron | 15.0% |
| !!! | TTTTTTTAACAATAATAGGT+AGG | + | chr2_4:10169789-10169808 | Msa0314420:intron | 15.0% |
| !!! | TTTTTTAACAATAATAGGTA+GGG | + | chr2_4:10169790-10169809 | Msa0314420:intron | 15.0% |
| !! | AAATGAGTTTGATTAATTTA+AGG | + | chr2_4:10171318-10171337 | Msa0314420:intron | 15.0% |
| !!! | TAAGATTTTCATTCATTAAA+TGG | - | chr2_4:10171438-10171457 | None:intergenic | 15.0% |
| !!! | TTTTTTTGGATGTATTATTT+TGG | + | chr2_4:10171997-10172016 | Msa0314420:intron | 15.0% |
| !! | TAATTCTATTATTATATTGC+AGG | + | chr2_4:10172916-10172935 | Msa0314420:three_prime_UTR | 15.0% |
| !!! | TTTTTAACTTCATCAAATCA+TGG | + | chr2_4:10169729-10169748 | Msa0314420:intron | 20.0% |
| !!! | TTTTAACTTCATCAAATCAT+GGG | + | chr2_4:10169730-10169749 | Msa0314420:intron | 20.0% |
| !! | GGTATTTCAATTTCAAAATT+AGG | + | chr2_4:10169751-10169770 | Msa0314420:intron | 20.0% |
| !!! | TATTATAATTTTTGACGACA+TGG | + | chr2_4:10170474-10170493 | Msa0314420:intron | 20.0% |
| !! | AGTTATTAATTTACTTTCAG+TGG | + | chr2_4:10170503-10170522 | Msa0314420:intron | 20.0% |
| !! | TTTAAAAGCTGTTGAAATTT+GGG | - | chr2_4:10171177-10171196 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGCTGTTGAAATT+TGG | - | chr2_4:10171178-10171197 | None:intergenic | 20.0% |
| !!! | AGTTGTAATCTTGTTTTTAA+AGG | + | chr2_4:10171377-10171396 | Msa0314420:intron | 20.0% |
| !!! | GTTGTAATCTTGTTTTTAAA+GGG | + | chr2_4:10171378-10171397 | Msa0314420:intron | 20.0% |
| !!! | AAGTCAATATTTTTTAAGCA+TGG | + | chr2_4:10171480-10171499 | Msa0314420:intron | 20.0% |
| !! | AATTTCAATTATCAAGACAA+TGG | - | chr2_4:10171581-10171600 | None:intergenic | 20.0% |
| !! | TTTATAAAATAGCCATTAGT+TGG | - | chr2_4:10171630-10171649 | None:intergenic | 20.0% |
| !!! | ATCAACGTAATTCAAATTTT+TGG | - | chr2_4:10171653-10171672 | None:intergenic | 20.0% |
| !!! | ACTTGTTTCTAATTAGTTAT+TGG | + | chr2_4:10171710-10171729 | Msa0314420:intron | 20.0% |
| !!! | CGATATTCATACAATTTTTT+TGG | + | chr2_4:10171983-10172002 | Msa0314420:intron | 20.0% |
| !! | TTAATCTTCACAAAAAGAAA+TGG | + | chr2_4:10172146-10172165 | Msa0314420:CDS | 20.0% |
| !! | GTTTATTTGATTAATCAGAT+AGG | - | chr2_4:10172277-10172296 | None:intergenic | 20.0% |
| !!! | CCGTTTTTAAATCTAAAAAT+CGG | - | chr2_4:10172321-10172340 | None:intergenic | 20.0% |
| !!! | CCGATTTTTAGATTTAAAAA+CGG | + | chr2_4:10172318-10172337 | Msa0314420:intron | 20.0% |
| !!! | TCTCAATTAATTTGAAATGT+AGG | + | chr2_4:10172507-10172526 | Msa0314420:intron | 20.0% |
| !! | TAATAGAATTAAAGTATACC+AGG | - | chr2_4:10172907-10172926 | None:intergenic | 20.0% |
| ! | TCTTTAACCTAATCAAATCA+TGG | + | chr2_4:10169647-10169666 | Msa0314420:intron | 25.0% |
| ! | CTTTAACCTAATCAAATCAT+GGG | + | chr2_4:10169648-10169667 | Msa0314420:intron | 25.0% |
| ! | GCTATCCAATTTCATAATTA+GGG | + | chr2_4:10169670-10169689 | Msa0314420:intron | 25.0% |
| ! | CAAAACCCTAATTATGAAAT+TGG | - | chr2_4:10169678-10169697 | None:intergenic | 25.0% |
| ! | ATGCTAAGATTTGTGAATTT+AGG | + | chr2_4:10170004-10170023 | Msa0314420:intron | 25.0% |
| ! | TGCTAAGATTTGTGAATTTA+GGG | + | chr2_4:10170005-10170024 | Msa0314420:intron | 25.0% |
| ! | AACATGAATAACACAATGTT+TGG | - | chr2_4:10170248-10170267 | None:intergenic | 25.0% |
| !! | AATCCAAAGTATTTATGTGT+CGG | + | chr2_4:10170421-10170440 | Msa0314420:intron | 25.0% |
| ! | CACTAAAATCAAAACTATCT+AGG | - | chr2_4:10170452-10170471 | None:intergenic | 25.0% |
| ! | TTTCCAAAACAGAGTAAATT+AGG | - | chr2_4:10170624-10170643 | None:intergenic | 25.0% |
| ! | ATTATGATGAGACTGATAAT+AGG | - | chr2_4:10170770-10170789 | None:intergenic | 25.0% |
| ! | TTAAAAGCTGTTGAAATTTG+GGG | - | chr2_4:10171176-10171195 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTAAAGGGATTTT+AGG | + | chr2_4:10171386-10171405 | Msa0314420:intron | 25.0% |
| !! | TCATAACTGTTAGATTTTGT+CGG | + | chr2_4:10171410-10171429 | Msa0314420:intron | 25.0% |
| !!! | TATTGACTTTCTAAGAAATC+AGG | - | chr2_4:10171469-10171488 | None:intergenic | 25.0% |
| !! | AAAATATTTTCCGTTATCAG+TGG | + | chr2_4:10171548-10171567 | Msa0314420:intron | 25.0% |
| ! | GTTTCTAATTAGTTATTGGT+TGG | + | chr2_4:10171714-10171733 | Msa0314420:intron | 25.0% |
| ! | TTTCCTTTAACACTTTGAAT+TGG | - | chr2_4:10171825-10171844 | None:intergenic | 25.0% |
| !! | AATTCAAAGTGTTAAAGGAA+AGG | + | chr2_4:10171824-10171843 | Msa0314420:CDS | 25.0% |
| ! | TATAAGTTTCATAAGCTTTC+AGG | + | chr2_4:10172436-10172455 | Msa0314420:intron | 25.0% |
| ! | ATAAGTTTCATAAGCTTTCA+GGG | + | chr2_4:10172437-10172456 | Msa0314420:intron | 25.0% |
| ! | TTGAGATCTATTAGTATCTA+GGG | - | chr2_4:10172493-10172512 | None:intergenic | 25.0% |
| ! | ATTGAGATCTATTAGTATCT+AGG | - | chr2_4:10172494-10172513 | None:intergenic | 25.0% |
| ! | AATATAGTCTGAGAATAATC+AGG | - | chr2_4:10172795-10172814 | None:intergenic | 25.0% |
| ! | TTGAATACAGATGTATTCTT+TGG | + | chr2_4:10172815-10172834 | Msa0314420:three_prime_UTR | 25.0% |
| !! | TTTATGTAACGTGTTTTCTA+TGG | - | chr2_4:10172969-10172988 | None:intergenic | 25.0% |
| ! | ATAGAAAACACGTTACATAA+AGG | + | chr2_4:10172968-10172987 | Msa0314420:three_prime_UTR | 25.0% |
| !!! | ATTTTTGAAGTTGAAGTCGA+TGG | - | chr2_4:10169430-10169449 | None:intergenic | 30.0% |
| GGCTATCCAATTTCATAATT+AGG | + | chr2_4:10169669-10169688 | Msa0314420:intron | 30.0% | |
| TAAGATTTGTGAATTTAGGG+TGG | + | chr2_4:10170008-10170027 | Msa0314420:intron | 30.0% | |
| TAAACACTTGTTTGAGCTTA+TGG | + | chr2_4:10170060-10170079 | Msa0314420:intron | 30.0% | |
| TTCATGGCATCATTCATAAA+CGG | + | chr2_4:10170089-10170108 | Msa0314420:intron | 30.0% | |
| ATATAAGCACTTATGTGACA+AGG | + | chr2_4:10170203-10170222 | Msa0314420:intron | 30.0% | |
| TATAAGCACTTATGTGACAA+GGG | + | chr2_4:10170204-10170223 | Msa0314420:intron | 30.0% | |
| GATACAGAAACAAGACATAA+AGG | - | chr2_4:10170390-10170409 | None:intergenic | 30.0% | |
| GACACATAAATACTTTGGAT+TGG | - | chr2_4:10170422-10170441 | None:intergenic | 30.0% | |
| ! | TAATTTTTGACGACATGGTT+TGG | + | chr2_4:10170479-10170498 | Msa0314420:intron | 30.0% |
| ! | ATTTTGCTGAACACTCTTTT+TGG | + | chr2_4:10170596-10170615 | Msa0314420:intron | 30.0% |
| ! | GTTCCTAATTTACTCTGTTT+TGG | + | chr2_4:10170618-10170637 | Msa0314420:intron | 30.0% |
| !!! | TCTGTTTTGGAAAAGTTTTG+TGG | + | chr2_4:10170631-10170650 | Msa0314420:intron | 30.0% |
| GTGGAAAGAACATTAGTTAA+TGG | + | chr2_4:10170650-10170669 | Msa0314420:intron | 30.0% | |
| AAAATACCAAGTTTGAACTC+TGG | - | chr2_4:10170962-10170981 | None:intergenic | 30.0% | |
| ! | AGAGTTCAAACTTGGTATTT+TGG | + | chr2_4:10170961-10170980 | Msa0314420:CDS | 30.0% |
| CTAATTCATCCTTACAAAAC+CGG | - | chr2_4:10171152-10171171 | None:intergenic | 30.0% | |
| ! | ATAAAATCGGCATTGAAATC+TGG | + | chr2_4:10171200-10171219 | Msa0314420:intron | 30.0% |
| AAACAAGATTACAACTGCAA+TGG | - | chr2_4:10171373-10171392 | None:intergenic | 30.0% | |
| ! | CATAACTGTTAGATTTTGTC+GGG | + | chr2_4:10171411-10171430 | Msa0314420:intron | 30.0% |
| ! | ATAACTGTTAGATTTTGTCG+GGG | + | chr2_4:10171412-10171431 | Msa0314420:intron | 30.0% |
| ! | ATTAAGAGCTCCTTATTTGA+GGG | - | chr2_4:10171520-10171539 | None:intergenic | 30.0% |
| ! | GTTGATCGAAGTTTTCATTT+AGG | + | chr2_4:10171667-10171686 | Msa0314420:intron | 30.0% |
| ! | AAGTTTTCATTTAGGTCTAG+TGG | + | chr2_4:10171675-10171694 | Msa0314420:intron | 30.0% |
| ! | GATCCAATTCAAAGTGTTAA+AGG | + | chr2_4:10171819-10171838 | Msa0314420:CDS | 30.0% |
| GTATCATATTACCTCTCTTT+AGG | + | chr2_4:10172042-10172061 | Msa0314420:intron | 30.0% | |
| TTCATTCTTCCTGTAATTGA+TGG | - | chr2_4:10172107-10172126 | None:intergenic | 30.0% | |
| !! | AACAGTCTGTTCATTAGTTT+TGG | - | chr2_4:10172209-10172228 | None:intergenic | 30.0% |
| TTGATTAATCAGATAGGCAA+CGG | - | chr2_4:10172271-10172290 | None:intergenic | 30.0% | |
| !! | ATTTGCTATTGCAAGTTTCT+CGG | - | chr2_4:10172593-10172612 | None:intergenic | 30.0% |
| AAACTTGCAATAGCAAATGT+TGG | + | chr2_4:10172595-10172614 | Msa0314420:CDS | 30.0% | |
| !!! | AGTTGTCTTTTTGGAACTTA+TGG | + | chr2_4:10172721-10172740 | Msa0314420:three_prime_UTR | 30.0% |
| ATGGTTAATCTAGCATGTTA+AGG | + | chr2_4:10172740-10172759 | Msa0314420:three_prime_UTR | 30.0% | |
| AACTTAGCACTTAGTTTCTT+TGG | + | chr2_4:10172864-10172883 | Msa0314420:three_prime_UTR | 30.0% | |
| AGTATACCAGGTAATATCAA+TGG | - | chr2_4:10172895-10172914 | None:intergenic | 30.0% | |
| ! | TATTGCAGGATTTTATGTTC+AGG | + | chr2_4:10172930-10172949 | Msa0314420:three_prime_UTR | 30.0% |
| TGAATCGATGAATCTGTGTT+GGG | - | chr2_4:10169480-10169499 | None:intergenic | 35.0% | |
| ATGAATCGATGAATCTGTGT+TGG | - | chr2_4:10169481-10169500 | None:intergenic | 35.0% | |
| !! | ACAGATTCATCGATTCATCA+TGG | + | chr2_4:10169483-10169502 | Msa0314420:exon | 35.0% |
| !! | TTCATCGATTCATCATGGAA+AGG | + | chr2_4:10169488-10169507 | Msa0314420:exon | 35.0% |
| CTTCTCAAGATGCTTAAACA+CGG | + | chr2_4:10169613-10169632 | Msa0314420:CDS | 35.0% | |
| TTAACAATAATAGGTAGGGC+TGG | + | chr2_4:10169794-10169813 | Msa0314420:intron | 35.0% | |
| TTTGATGCTTGGAGAATTTG+TGG | + | chr2_4:10169838-10169857 | Msa0314420:CDS | 35.0% | |
| CTTGATATGCTCAAACAAAC+TGG | + | chr2_4:10169959-10169978 | Msa0314420:CDS | 35.0% | |
| ATATGCTCAAACAAACTGGA+AGG | + | chr2_4:10169963-10169982 | Msa0314420:CDS | 35.0% | |
| GAGCTTATGGAAATAGTTCA+TGG | + | chr2_4:10170073-10170092 | Msa0314420:intron | 35.0% | |
| TATCATTCACATCCTGGATT+TGG | + | chr2_4:10170314-10170333 | Msa0314420:CDS | 35.0% | |
| CAACCGACACATAAATACTT+TGG | - | chr2_4:10170427-10170446 | None:intergenic | 35.0% | |
| ATTCACGTCAAAGAGATTCA+CGG | - | chr2_4:10170536-10170555 | None:intergenic | 35.0% | |
| ! | GATATGAGGATTGGTATAGT+GGG | - | chr2_4:10170726-10170745 | None:intergenic | 35.0% |
| AGTTGTTACGATATGAGGAT+TGG | - | chr2_4:10170735-10170754 | None:intergenic | 35.0% | |
| AAGCATACAGTGCATACTAT+AGG | - | chr2_4:10170840-10170859 | None:intergenic | 35.0% | |
| !!! | CTTGGTATTTTGGCTTTTGT+TGG | + | chr2_4:10170971-10170990 | Msa0314420:CDS | 35.0% |
| !! | CGGTTTTGTAAGGATGAATT+AGG | + | chr2_4:10171150-10171169 | Msa0314420:intron | 35.0% |
| ! | GATTAAGAGCTCCTTATTTG+AGG | - | chr2_4:10171521-10171540 | None:intergenic | 35.0% |
| !! | TGGTTTGTTTCCACTGATAA+CGG | - | chr2_4:10171561-10171580 | None:intergenic | 35.0% |
| ! | TCAAAGTGTTAAAGGAAAGG+TGG | + | chr2_4:10171827-10171846 | Msa0314420:CDS | 35.0% |
| TTTATTCAGATGTCCCAGAT+TGG | - | chr2_4:10171922-10171941 | None:intergenic | 35.0% | |
| TCTGAATAAACCATCCATTC+AGG | + | chr2_4:10171932-10171951 | Msa0314420:CDS | 35.0% | |
| TGGCTATGGAATAATAATGC+CGG | - | chr2_4:10172087-10172106 | None:intergenic | 35.0% | |
| ATTCCATAGCCATCAATTAC+AGG | + | chr2_4:10172095-10172114 | Msa0314420:CDS | 35.0% | |
| !! | CACAAAAAGAAATGGACTGA+TGG | + | chr2_4:10172154-10172173 | Msa0314420:CDS | 35.0% |
| AACTAATGAACAGACTGTTC+AGG | + | chr2_4:10172210-10172229 | Msa0314420:CDS | 35.0% | |
| CTTAGCTACCAAATACAACA+AGG | + | chr2_4:10172540-10172559 | Msa0314420:CDS | 35.0% | |
| !! | TTGAACAGCCTTGTTGTATT+TGG | - | chr2_4:10172551-10172570 | None:intergenic | 35.0% |
| !! | TTTGCTATTGCAAGTTTCTC+GGG | - | chr2_4:10172592-10172611 | None:intergenic | 35.0% |
| TCTAACATCGTTCAAACTCT+TGG | + | chr2_4:10172670-10172689 | Msa0314420:CDS | 35.0% | |
| !!! | GTCTTCTAGAGTTGTCTTTT+TGG | + | chr2_4:10172712-10172731 | Msa0314420:exon | 35.0% |
| GAATCGATGAATCTGTGTTG+GGG | - | chr2_4:10169479-10169498 | None:intergenic | 40.0% | |
| ! | GACTTGTTCGGATGAATCTA+GGG | - | chr2_4:10169575-10169594 | None:intergenic | 40.0% |
| ! | AGACTTGTTCGGATGAATCT+AGG | - | chr2_4:10169576-10169595 | None:intergenic | 40.0% |
| ! | GGATGAGATGTAGACTTGTT+CGG | - | chr2_4:10169587-10169606 | None:intergenic | 40.0% |
| GGATAGCCCATGATTTGATT+AGG | - | chr2_4:10169657-10169676 | None:intergenic | 40.0% | |
| ATCAAACCCATAACCTCCAT+GGG | - | chr2_4:10169824-10169843 | None:intergenic | 40.0% | |
| TGTTGACATCAATACACAGC+AGG | + | chr2_4:10170352-10170371 | Msa0314420:CDS | 40.0% | |
| ATACACAGCAGGTTCTACTA+TGG | + | chr2_4:10170363-10170382 | Msa0314420:intron | 40.0% | |
| !! | TATAGTGGGTTGGCAAAGTT+GGG | - | chr2_4:10170712-10170731 | None:intergenic | 40.0% |
| ! | CGATATGAGGATTGGTATAG+TGG | - | chr2_4:10170727-10170746 | None:intergenic | 40.0% |
| GTCAGAGTTGTTACGATATG+AGG | - | chr2_4:10170740-10170759 | None:intergenic | 40.0% | |
| CATAATAGCCACTGTGACTT+AGG | + | chr2_4:10170784-10170803 | Msa0314420:intron | 40.0% | |
| ! | TTAGGTTGTTTGCTCGCTTA+TGG | + | chr2_4:10170802-10170821 | Msa0314420:intron | 40.0% |
| CTTAGTTTCCCCAAGAAGAT+CGG | + | chr2_4:10170857-10170876 | Msa0314420:CDS | 40.0% | |
| CTTCATTGTGTTGCCTTTGA+GGG | + | chr2_4:10171074-10171093 | Msa0314420:intron | 40.0% | |
| TTCATTGTGTTGCCTTTGAG+GGG | + | chr2_4:10171075-10171094 | Msa0314420:intron | 40.0% | |
| CATTGAAATCTGGATCACCA+AGG | + | chr2_4:10171210-10171229 | Msa0314420:intron | 40.0% | |
| AGAATACTTTGCACGCTGTT+TGG | - | chr2_4:10171268-10171287 | None:intergenic | 40.0% | |
| AGATTACAACTGCAATGGAC+CGG | - | chr2_4:10171368-10171387 | None:intergenic | 40.0% | |
| AATAGCCATTAGTTGGCACT+TGG | - | chr2_4:10171623-10171642 | None:intergenic | 40.0% | |
| AATCCACAGACAATGATGCT+TGG | + | chr2_4:10171873-10171892 | Msa0314420:CDS | 40.0% | |
| ATGGATCAATGCCTAAAGAG+AGG | - | chr2_4:10172056-10172075 | None:intergenic | 40.0% | |
| !! | TCTCTTTAGGCATTGATCCA+TGG | + | chr2_4:10172055-10172074 | Msa0314420:intron | 40.0% |
| !! | CTCTTTAGGCATTGATCCAT+GGG | + | chr2_4:10172056-10172075 | Msa0314420:intron | 40.0% |
| ! | CTTCCTGTAATTGATGGCTA+TGG | - | chr2_4:10172101-10172120 | None:intergenic | 40.0% |
| TTACAGGAAGAATGAACTCG+AGG | + | chr2_4:10172111-10172130 | Msa0314420:CDS | 40.0% | |
| TTAAGATGCAGCGTGTAATG+TGG | + | chr2_4:10172238-10172257 | Msa0314420:intron | 40.0% | |
| TAAGATGCAGCGTGTAATGT+GGG | + | chr2_4:10172239-10172258 | Msa0314420:intron | 40.0% | |
| AAGCTTTCAGGGAGAACTTA+TGG | + | chr2_4:10172448-10172467 | Msa0314420:intron | 40.0% | |
| ATACAACAAGGCTGTTCAAG+AGG | + | chr2_4:10172552-10172571 | Msa0314420:CDS | 40.0% | |
| ! | AATTTGAGACATGCTCTTCG+AGG | - | chr2_4:10172642-10172661 | None:intergenic | 40.0% |
| ATTCTTTGGACGAGCTGAAA+AGG | + | chr2_4:10172829-10172848 | Msa0314420:three_prime_UTR | 40.0% | |
| GTGACTCCATTGATATTACC+TGG | + | chr2_4:10172886-10172905 | Msa0314420:three_prime_UTR | 40.0% | |
| AGTCGATGGCGAAGTAAAGA+GGG | - | chr2_4:10169416-10169435 | None:intergenic | 45.0% | |
| AAGTCGATGGCGAAGTAAAG+AGG | - | chr2_4:10169417-10169436 | None:intergenic | 45.0% | |
| AGGCTTCAAAGAATGTTCGC+AGG | + | chr2_4:10169508-10169527 | Msa0314420:CDS | 45.0% | |
| ! | GAATCTAGGGTTGGAGAATC+TGG | - | chr2_4:10169562-10169581 | None:intergenic | 45.0% |
| ! | TGTTCGGATGAATCTAGGGT+TGG | - | chr2_4:10169571-10169590 | None:intergenic | 45.0% |
| AAGCATCTTGAGAAGAGCGA+GGG | - | chr2_4:10169608-10169627 | None:intergenic | 45.0% | |
| TAAGCATCTTGAGAAGAGCG+AGG | - | chr2_4:10169609-10169628 | None:intergenic | 45.0% | |
| CATCAAACCCATAACCTCCA+TGG | - | chr2_4:10169825-10169844 | None:intergenic | 45.0% | |
| GAGGTTATGGGTTTGATGCT+TGG | + | chr2_4:10169827-10169846 | Msa0314420:CDS | 45.0% | |
| ATTGTGTTGCAGACCAGAGA+TGG | + | chr2_4:10170280-10170299 | Msa0314420:intron | 45.0% | |
| !! | GTATAGTGGGTTGGCAAAGT+TGG | - | chr2_4:10170713-10170732 | None:intergenic | 45.0% |
| !! | TGAGGATTGGTATAGTGGGT+TGG | - | chr2_4:10170722-10170741 | None:intergenic | 45.0% |
| GCAAACAACCTAAGTCACAG+TGG | - | chr2_4:10170795-10170814 | None:intergenic | 45.0% | |
| TTGATTGGACGGTACATACG+TGG | - | chr2_4:10170928-10170947 | None:intergenic | 45.0% | |
| ACCGTCCAATCAAGATCAGA+CGG | + | chr2_4:10170935-10170954 | Msa0314420:CDS | 45.0% | |
| ACCGTCTGATCTTGATTGGA+CGG | - | chr2_4:10170939-10170958 | None:intergenic | 45.0% | |
| TGGAAATTCCGCCTTAACTG+CGG | + | chr2_4:10170991-10171010 | Msa0314420:CDS | 45.0% | |
| CAAACCAAAGCCCGCAATTT+AGG | - | chr2_4:10171032-10171051 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr2_4:10171067-10171086 | None:intergenic | 45.0% |
| ! | AGGCAACACAATGAAGGTGT+TGG | - | chr2_4:10171070-10171089 | None:intergenic | 45.0% |
| CCTCAAAGGCAACACAATGA+AGG | - | chr2_4:10171076-10171095 | None:intergenic | 45.0% | |
| CCTTCATTGTGTTGCCTTTG+AGG | + | chr2_4:10171073-10171092 | Msa0314420:intron | 45.0% | |
| ! | TCATTGTGTTGCCTTTGAGG+GGG | + | chr2_4:10171076-10171095 | Msa0314420:intron | 45.0% |
| TGTCCTATCTATCCGATGTG+GGG | - | chr2_4:10171111-10171130 | None:intergenic | 45.0% | |
| GTGTCCTATCTATCCGATGT+GGG | - | chr2_4:10171112-10171131 | None:intergenic | 45.0% | |
| TGTGTCCTATCTATCCGATG+TGG | - | chr2_4:10171113-10171132 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr2_4:10171143-10171162 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr2_4:10171140-10171159 | Msa0314420:intron | 45.0% |
| AAATCTGGATCACCAAGGTG+TGG | + | chr2_4:10171215-10171234 | Msa0314420:intron | 45.0% | |
| CTTTGCACGCTGTTTGGATT+GGG | - | chr2_4:10171262-10171281 | None:intergenic | 45.0% | |
| ACTTTGCACGCTGTTTGGAT+TGG | - | chr2_4:10171263-10171282 | None:intergenic | 45.0% | |
| CAGTACTCTCTCAGATAAGC+TGG | - | chr2_4:10171296-10171315 | None:intergenic | 45.0% | |
| ATCACCCATGCAAGTTATGC+CGG | + | chr2_4:10171346-10171365 | Msa0314420:intron | 45.0% | |
| CTTATTTGAGGGATCAGAGC+AGG | - | chr2_4:10171509-10171528 | None:intergenic | 45.0% | |
| CTGCTCTGATCCCTCAAATA+AGG | + | chr2_4:10171507-10171526 | Msa0314420:intron | 45.0% | |
| !! | TAGTTATTGGTTGGTGCTGC+TGG | + | chr2_4:10171723-10171742 | Msa0314420:intron | 45.0% |
| TCAAAGCCTCAAAACTCTGC+AGG | - | chr2_4:10171773-10171792 | None:intergenic | 45.0% | |
| TGTCCAAGCATCATTGTCTG+TGG | - | chr2_4:10171879-10171898 | None:intergenic | 45.0% | |
| TGATGCTTGGACAAGAACCA+AGG | + | chr2_4:10171886-10171905 | Msa0314420:CDS | 45.0% | |
| AGATTGGAAGTTGTCTGCCT+TGG | - | chr2_4:10171906-10171925 | None:intergenic | 45.0% | |
| AAGGCAGACAACTTCCAATC+TGG | + | chr2_4:10171905-10171924 | Msa0314420:CDS | 45.0% | |
| AGGCAGACAACTTCCAATCT+GGG | + | chr2_4:10171906-10171925 | Msa0314420:CDS | 45.0% | |
| ! | GTTTGAGTTACGCACCTGAA+TGG | - | chr2_4:10171949-10171968 | None:intergenic | 45.0% |
| ! | CATTGATCCATGGGTTGAAC+CGG | + | chr2_4:10172065-10172084 | Msa0314420:CDS | 45.0% |
| !! | AATAATGCCGGTTCAACCCA+TGG | - | chr2_4:10172075-10172094 | None:intergenic | 45.0% |
| CAAAGAATGTTCGCAGGTGC+AGG | + | chr2_4:10169514-10169533 | Msa0314420:CDS | 50.0% | |
| !! | ATCTGGTGGTGGATGACCTA+GGG | - | chr2_4:10169545-10169564 | None:intergenic | 50.0% |
| !! | AATCTGGTGGTGGATGACCT+AGG | - | chr2_4:10169546-10169565 | None:intergenic | 50.0% |
| ! | TCTAGGGTTGGAGAATCTGG+TGG | - | chr2_4:10169559-10169578 | None:intergenic | 50.0% |
| TGGTGTTCCCATGGAGGTTA+TGG | + | chr2_4:10169814-10169833 | Msa0314420:CDS | 50.0% | |
| GGTGTTCCCATGGAGGTTAT+GGG | + | chr2_4:10169815-10169834 | Msa0314420:CDS | 50.0% | |
| GTGTTTGCAATGCCACAGAG+TGG | + | chr2_4:10169887-10169906 | Msa0314420:CDS | 50.0% | |
| CTAACACCAGTTCCACTCTG+TGG | - | chr2_4:10169902-10169921 | None:intergenic | 50.0% | |
| TGCAGACCAGAGATGGTTGT+TGG | + | chr2_4:10170287-10170306 | Msa0314420:intron | 50.0% | |
| TACCAGCCAACAACCATCTC+TGG | - | chr2_4:10170296-10170315 | None:intergenic | 50.0% | |
| GGCTGGTATCATTCACATCC+TGG | + | chr2_4:10170308-10170327 | Msa0314420:CDS | 50.0% | |
| CACATCCTGGATTTGGCTGT+TGG | + | chr2_4:10170321-10170340 | Msa0314420:CDS | 50.0% | |
| GACAACCAACAGCCAAATCC+AGG | - | chr2_4:10170329-10170348 | None:intergenic | 50.0% | |
| ! | GGATTTGGCTGTTGGTTGTC+TGG | + | chr2_4:10170329-10170348 | Msa0314420:CDS | 50.0% |
| TTCCCCAAGAAGATCGGATC+TGG | + | chr2_4:10170863-10170882 | Msa0314420:CDS | 50.0% | |
| TCCCCAAGAAGATCGGATCT+GGG | + | chr2_4:10170864-10170883 | Msa0314420:CDS | 50.0% | |
| AGCCCAGATCCGATCTTCTT+GGG | - | chr2_4:10170869-10170888 | None:intergenic | 50.0% | |
| TTGGACGGTACATACGTGGT+TGG | - | chr2_4:10170924-10170943 | None:intergenic | 50.0% | |
| CTGGACCGTCTGATCTTGAT+TGG | - | chr2_4:10170943-10170962 | None:intergenic | 50.0% | |
| GACGGTCCAGAGTTCAAACT+TGG | + | chr2_4:10170953-10170972 | Msa0314420:CDS | 50.0% | |
| TAGCCCCACATCGGATAGAT+AGG | + | chr2_4:10171105-10171124 | Msa0314420:intron | 50.0% | |
| ACACTCCTCACCTTACAAGC+CGG | + | chr2_4:10171130-10171149 | Msa0314420:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr2_4:10171138-10171157 | None:intergenic | 50.0% |
| AGTGTGACTGAACCACACCT+TGG | - | chr2_4:10171230-10171249 | None:intergenic | 50.0% | |
| ! | TGGACCGGCATAACTTGCAT+GGG | - | chr2_4:10171353-10171372 | None:intergenic | 50.0% |
| ! | ATGGACCGGCATAACTTGCA+TGG | - | chr2_4:10171354-10171373 | None:intergenic | 50.0% |
| CACTGCCAAGTGCCAACTAA+TGG | + | chr2_4:10171615-10171634 | Msa0314420:intron | 50.0% | |
| ! | TCGTGTCCTGCAGAGTTTTG+AGG | + | chr2_4:10171764-10171783 | Msa0314420:intron | 50.0% |
| TGGATCCACAACTACAGCCA+CGG | - | chr2_4:10171805-10171824 | None:intergenic | 50.0% | |
| GAGTTACGCACCTGAATGGA+TGG | - | chr2_4:10171945-10171964 | None:intergenic | 50.0% | |
| GGACTGATGGCTTGACACTT+AGG | + | chr2_4:10172167-10172186 | Msa0314420:CDS | 50.0% | |
| ! | ATGCTCTTCGAGGTGCTTCT+TGG | - | chr2_4:10172632-10172651 | None:intergenic | 50.0% |
| AGAATGTTCGCAGGTGCAGG+TGG | + | chr2_4:10169517-10169536 | Msa0314420:CDS | 55.0% | |
| AGGGTTGGAGAATCTGGTGG+TGG | - | chr2_4:10169556-10169575 | None:intergenic | 55.0% | |
| GCAATGCCACAGAGTGGAAC+TGG | + | chr2_4:10169893-10169912 | Msa0314420:CDS | 55.0% | |
| GACCAGAGATGGTTGTTGGC+TGG | + | chr2_4:10170291-10170310 | Msa0314420:intron | 55.0% | |
| GCCCAGATCCGATCTTCTTG+GGG | - | chr2_4:10170868-10170887 | None:intergenic | 55.0% | |
| CAGCCCAGATCCGATCTTCT+TGG | - | chr2_4:10170870-10170889 | None:intergenic | 55.0% | |
| TGCGTGCAGTCACAACCTTG+TGG | + | chr2_4:10170888-10170907 | Msa0314420:CDS | 55.0% | |
| TAGGGGGAAGACCGCAGTTA+AGG | - | chr2_4:10171005-10171024 | None:intergenic | 55.0% | |
| CCGCAATTTAGGCGACTAGG+GGG | - | chr2_4:10171021-10171040 | None:intergenic | 55.0% | |
| CCCCCTAGTCGCCTAAATTG+CGG | + | chr2_4:10171018-10171037 | Msa0314420:intron | 55.0% | |
| CCCGCAATTTAGGCGACTAG+GGG | - | chr2_4:10171022-10171041 | None:intergenic | 55.0% | |
| CCCCTAGTCGCCTAAATTGC+GGG | + | chr2_4:10171019-10171038 | Msa0314420:intron | 55.0% | |
| GCCCGCAATTTAGGCGACTA+GGG | - | chr2_4:10171023-10171042 | None:intergenic | 55.0% | |
| AGCCCGCAATTTAGGCGACT+AGG | - | chr2_4:10171024-10171043 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGGCTT+TGG | + | chr2_4:10171025-10171044 | Msa0314420:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr2_4:10171055-10171074 | None:intergenic | 55.0% |
| ! | TTGTGTTGCCTTTGAGGGGG+TGG | + | chr2_4:10171079-10171098 | Msa0314420:intron | 55.0% |
| GGCTAAATCCACCCCCTCAA+AGG | - | chr2_4:10171090-10171109 | None:intergenic | 55.0% | |
| ! | GGGTGGATTTAGCCCCACAT+CGG | + | chr2_4:10171096-10171115 | Msa0314420:intron | 55.0% |
| !! | GGCTTTGAATCAGAGAGCCG+TGG | + | chr2_4:10171785-10171804 | Msa0314420:CDS | 55.0% |
| ! | AGGTAGGGCTGGTGTTCCCA+TGG | + | chr2_4:10169805-10169824 | Msa0314420:intron | 60.0% |
| ! | TAGGGCTGGTGTTCCCATGG+AGG | + | chr2_4:10169808-10169827 | Msa0314420:CDS | 60.0% |
| GTTGGCTGCATGCAGCCACA+AGG | - | chr2_4:10170906-10170925 | None:intergenic | 60.0% | |
| GGGGAAGACCGCAGTTAAGG+CGG | - | chr2_4:10171002-10171021 | None:intergenic | 60.0% | |
| GAGAGCCGTGGCTGTAGTTG+TGG | + | chr2_4:10171797-10171816 | Msa0314420:CDS | 60.0% | |
| GCAGGTGCAGGTGGAGCCCT+AGG | + | chr2_4:10169526-10169545 | Msa0314420:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 10169362 | 10173000 | 10169362 | ID=Msa0314420;Name=Msa0314420 |
| chr2_4 | mRNA | 10169362 | 10173000 | 10169362 | ID=Msa0314420-mRNA-1;Parent=Msa0314420;Name=Msa0314420-mRNA-1;_AED=0.13;_eAED=0.13;_QI=140|0.66|0.85|0.85|1|1|7|280|378 |
| chr2_4 | exon | 10169362 | 10169634 | 10169362 | ID=Msa0314420-mRNA-1:exon:3884;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10169807 | 10169984 | 10169807 | ID=Msa0314420-mRNA-1:exon:3885;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10170292 | 10170373 | 10170292 | ID=Msa0314420-mRNA-1:exon:3886;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10170806 | 10171012 | 10170806 | ID=Msa0314420-mRNA-1:exon:3887;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10171777 | 10171953 | 10171777 | ID=Msa0314420-mRNA-1:exon:3888;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10172064 | 10172231 | 10172064 | ID=Msa0314420-mRNA-1:exon:3889;Parent=Msa0314420-mRNA-1 |
| chr2_4 | exon | 10172529 | 10173000 | 10172529 | ID=Msa0314420-mRNA-1:exon:3890;Parent=Msa0314420-mRNA-1 |
| chr2_4 | five_prime_UTR | 10169362 | 10169501 | 10169362 | ID=Msa0314420-mRNA-1:five_prime_utr;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10169502 | 10169634 | 10169502 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10169807 | 10169984 | 10169807 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10170292 | 10170373 | 10170292 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10170806 | 10171012 | 10170806 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10171777 | 10171953 | 10171777 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10172064 | 10172231 | 10172064 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | CDS | 10172529 | 10172720 | 10172529 | ID=Msa0314420-mRNA-1:cds;Parent=Msa0314420-mRNA-1 |
| chr2_4 | three_prime_UTR | 10172721 | 10173000 | 10172721 | ID=Msa0314420-mRNA-1:three_prime_utr;Parent=Msa0314420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
