AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1226470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1226470 MtrunA17_Chr8g0381831 96.822 818 25 1 1 817 25 842 0.0 1645
Msa1226470 MtrunA17_Chr3g0123801 66.709 784 221 9 1 767 1 761 0.0 1055
Msa1226470 MtrunA17_Chr3g0102711 30.876 217 118 6 166 378 296 484 3.67e-18 89.4
Msa1226470 MtrunA17_Chr5g0446691 33.728 169 86 7 185 351 340 484 9.68e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1226470 AT2G22400.1 60.396 808 276 14 8 788 11 801 0.0 973
Msa1226470 AT4G40000.1 57.143 791 293 10 1 773 1 763 0.0 876
Msa1226470 AT4G40000.2 55.208 576 215 9 216 773 1 551 0.0 608
Msa1226470 AT4G26600.1 29.730 296 157 12 166 445 327 587 4.65e-17 86.3
Msa1226470 AT4G26600.3 29.730 296 157 12 166 445 327 587 5.73e-17 85.9
Msa1226470 AT5G55920.1 30.244 205 111 6 161 359 339 517 2.55e-16 84.0
Msa1226470 AT4G26600.8 31.313 198 108 4 166 359 327 500 3.92e-16 82.8
Msa1226470 AT4G26600.7 29.954 217 120 5 166 378 327 515 3.94e-16 82.8
Msa1226470 AT3G13180.1 31.361 169 90 4 185 351 334 478 5.63e-13 72.8

Find 199 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAGGATGCCGTTTAAA+AGG 0.190650 8_2:+859082 Msa1226470:CDS
TAAAAGAAAGCTACAATATC+AGG 0.193012 8_2:+862084 Msa1226470:CDS
TGCAAGGTTCACATAAATTT+AGG 0.224737 8_2:-863739 None:intergenic
TTTACTTTCTGCAGGAATTC+AGG 0.226926 8_2:+859291 Msa1226470:intron
TTCCGTTCTTGCAGCTATTC+TGG 0.233522 8_2:+861841 Msa1226470:intron
GCTCTTCACCATGTGCTTTC+CGG 0.245863 8_2:+863070 Msa1226470:CDS
CTTCATGATTAGTAACAATT+AGG 0.246866 8_2:-859051 None:intergenic
TGGTTGTTGCGTGGTTATTA+TGG 0.247821 8_2:+863251 Msa1226470:CDS
TTAAAGCTAGAAAATGAAAT+TGG 0.254499 8_2:+858167 Msa1226470:CDS
GGCACAGAAAATGGCTCTTC+TGG 0.261873 8_2:+863512 Msa1226470:CDS
CTTTCCAGTATGTTTCCTTC+TGG 0.278031 8_2:+861438 Msa1226470:CDS
TCCTTCTGGCAAATGCTATC+AGG 0.284071 8_2:+861452 Msa1226470:CDS
CATCATTTAGAATCAATTCT+AGG 0.285604 8_2:+856684 Msa1226470:CDS
GGTTTATCTTTACTCAAAAT+CGG 0.300019 8_2:+860250 Msa1226470:intron
AAAGTCTTGCAAGCAATTCT+TGG 0.304314 8_2:-863478 None:intergenic
ACGGAACTTGGGAACATCTT+TGG 0.305209 8_2:-861403 None:intergenic
TTCCGTTCTTCACGTGTTAG+AGG 0.306424 8_2:-862004 None:intergenic
ATAGGTTCCTCCCCTATTCT+TGG 0.312286 8_2:+858581 Msa1226470:intron
TGGTTATGTATGGAAGAATA+AGG 0.325256 8_2:-863113 None:intergenic
GATGCAGTTGTGGCGCGTTT+TGG 0.332809 8_2:-856403 None:intergenic
TGTATCCCATACAGATGATT+TGG 0.333655 8_2:+861973 Msa1226470:CDS
TCCTCTACCCATGGTTGCTC+TGG 0.337907 8_2:-856432 None:intergenic
ATACGTCTAGGCACAGAAAA+TGG 0.356138 8_2:+863503 Msa1226470:CDS
TACCATTTCCGCCACATATC+AGG 0.360042 8_2:-859208 None:intergenic
GGTTGTTGCGTGGTTATTAT+GGG 0.360528 8_2:+863252 Msa1226470:CDS
GTCAAAACAGAGAAAACGTT+TGG 0.362743 8_2:+856483 Msa1226470:CDS
CGGCCTTTGCCCTGGTATCC+CGG 0.363804 8_2:+856981 Msa1226470:CDS
GTACTTAGAACCAGGGAGTC+AGG 0.375840 8_2:-863780 None:intergenic
GTTTATCTTTACTCAAAATC+GGG 0.381887 8_2:+860251 Msa1226470:CDS
CTGAATGCACATCCAAGAAT+AGG 0.383509 8_2:-858593 None:intergenic
AATCACACTTCTACGGAACT+TGG 0.388539 8_2:-861415 None:intergenic
TATCTTCCAAATCATCTGTA+TGG 0.390960 8_2:-861979 None:intergenic
TGAATGCACATCCAAGAATA+GGG 0.393782 8_2:-858592 None:intergenic
GCTTACTGTCAAGTACAAAA+TGG 0.398024 8_2:-858617 None:intergenic
AACACAGCAGAGAAGGTTCC+AGG 0.405306 8_2:+862061 Msa1226470:CDS
AGCAAAGTTCCCGGGATACC+AGG 0.408224 8_2:-856991 None:intergenic
AGCTACAATATCAGGGCAAA+TGG 0.412664 8_2:+862092 Msa1226470:CDS
TTACTTTCTGCAGGAATTCA+GGG 0.413804 8_2:+859292 Msa1226470:intron
GTCGGCCAGGTCTCAAGAAA+TGG 0.414879 8_2:+860701 Msa1226470:CDS
CACCTGATATGTGGCGGAAA+TGG 0.415761 8_2:+859206 Msa1226470:CDS
AAGACAGGAAGCTGTTAGTA+TGG 0.418992 8_2:+858199 Msa1226470:CDS
TATTGTTGCGTTGAACTTCT+CGG 0.421626 8_2:+862282 Msa1226470:CDS
CAATCGGATGCTGGAGGGGT+AGG 0.425361 8_2:+863420 Msa1226470:CDS
TTCACCTCCAACATAGTTAG+AGG 0.427601 8_2:-863549 None:intergenic
ATAATTTGCTTGGTTATGTA+TGG 0.434010 8_2:-863123 None:intergenic
GCATAGCAATTAAAACTTGT+AGG 0.441578 8_2:-859335 None:intergenic
GGTTATGTATGGAAGAATAA+GGG 0.441749 8_2:-863112 None:intergenic
TGAATGCCAAGCAAAGTTCC+CGG 0.442297 8_2:-857000 None:intergenic
ATTCTCAAACTACTACTCAT+TGG 0.443034 8_2:+856549 Msa1226470:CDS
GGTGTATAGTCTCGAGCAAT+TGG 0.445281 8_2:-858777 None:intergenic
TTGTTGACTCGTCAACTTTG+AGG 0.446066 8_2:-863394 None:intergenic
TCGGAGGATAAGGAAGGGTC+TGG 0.446587 8_2:-856524 None:intergenic
AATTGTTGATCCACAAGAAT+GGG 0.449501 8_2:+856625 Msa1226470:CDS
GGCAAATGCTATCAGGATCT+TGG 0.450132 8_2:+861459 Msa1226470:CDS
GGTATCCCGGGAACTTTGCT+TGG 0.450478 8_2:+856994 Msa1226470:CDS
TGTTGACTCGTCAACTTTGA+GGG 0.452988 8_2:-863393 None:intergenic
AAAAGGGAATTATGAAAGAA+TGG 0.453153 8_2:+859099 Msa1226470:CDS
TGATGATATTCGTTCCCAAT+TGG 0.458564 8_2:+856808 Msa1226470:CDS
GATAAGGAAGGGTCTGGATC+TGG 0.459026 8_2:-856518 None:intergenic
GCACAGAAAATGGCTCTTCT+GGG 0.461885 8_2:+863513 Msa1226470:CDS
TCCTCAAGACTCTGTTTGCT+AGG 0.463373 8_2:-861869 None:intergenic
GGACTTCAAGCGTCTTCTGC+AGG 0.467959 8_2:+863161 Msa1226470:CDS
TGCGTGGTTATTATGGGTAA+AGG 0.468510 8_2:+863258 Msa1226470:CDS
GCAATCCTTCGGATGATATC+CGG 0.470647 8_2:-863089 None:intergenic
GATGCTGGAGGGGTAGGGCG+AGG 0.471870 8_2:+863426 Msa1226470:CDS
TTCCTTTGATTCTTATTACA+AGG 0.477035 8_2:+856595 Msa1226470:CDS
AGGTGAAGCACAGGCTGTAC+AGG 0.479774 8_2:+863565 Msa1226470:CDS
GGCCTTTGCCCTGGTATCCC+GGG 0.479981 8_2:+856982 Msa1226470:CDS
TCCCAGGATGCCGTTTAAAA+GGG 0.480126 8_2:+859083 Msa1226470:CDS
ATGATTAGTAACAATTAGGT+TGG 0.480820 8_2:-859047 None:intergenic
GAGGTGAGACAGAGGCGATT+CGG 0.481360 8_2:+856961 Msa1226470:CDS
CATAACCAAGCAAATTATAC+AGG 0.483742 8_2:+863128 Msa1226470:CDS
TAGGGCGAGGTTGTCCGTGA+TGG 0.485207 8_2:+863439 Msa1226470:CDS
TAATTGTTGATCCACAAGAA+TGG 0.487617 8_2:+856624 Msa1226470:CDS
AGATGCCTGTATAATTTGCT+TGG 0.489845 8_2:-863133 None:intergenic
TTTGCCAGAAGGAAACATAC+TGG 0.491351 8_2:-861442 None:intergenic
AATCGGATGCTGGAGGGGTA+GGG 0.491437 8_2:+863421 Msa1226470:CDS
CAGAAGACGCTTGAAGTCCT+CGG 0.494208 8_2:-863157 None:intergenic
ACCTTCCATTTCTTGAGACC+TGG 0.495511 8_2:-860706 None:intergenic
ATGATGCAGGCAATGGTGTT+CGG 0.497996 8_2:-856667 None:intergenic
AAGAATAAGGGGCAATCCTT+CGG 0.498704 8_2:-863100 None:intergenic
TTGCAGCACAGCAATGAAGA+AGG 0.499587 8_2:-861658 None:intergenic
CAACAATAGCAATCGGATGC+TGG 0.499828 8_2:+863411 Msa1226470:CDS
GACAATTCCTCTAACTATGT+TGG 0.501847 8_2:+863542 Msa1226470:CDS
GTAACAAGGTGACCATCAAA+TGG 0.503653 8_2:-862199 None:intergenic
AGAAAATGGCTCTTCTGGGC+AGG 0.504580 8_2:+863517 Msa1226470:CDS
AAGGCAGCAAACTTATTGCC+TGG 0.507560 8_2:+863231 Msa1226470:CDS
AGGAATTCAGGGATGGGACA+AGG 0.507941 8_2:+859303 Msa1226470:intron
AACAATATCCTTGACTGACT+TGG 0.510238 8_2:-862266 None:intergenic
AGGCGATTCGGCCTTTGCCC+TGG 0.513851 8_2:+856973 Msa1226470:CDS
GTCCGTGATGGTCTCTGCAA+TGG 0.514638 8_2:+863451 Msa1226470:CDS
AGGATCACTGCCTGATGGAA+TGG 0.519136 8_2:+858813 Msa1226470:CDS
GACGAGTCAACAATAGCAAT+CGG 0.521462 8_2:+863404 Msa1226470:CDS
TGAGACAGTCCCTGACTCCC+TGG 0.523646 8_2:+863770 Msa1226470:three_prime_UTR
AGAAGACGCTTGAAGTCCTC+GGG 0.525989 8_2:-863156 None:intergenic
ATGACACAAACCATTCCATC+AGG 0.526171 8_2:-858823 None:intergenic
AACCTCGTCGTTAGTTTCGA+AGG 0.529695 8_2:+863953 Msa1226470:three_prime_UTR
GAGTATGAGTACTAATACAA+AGG 0.530080 8_2:-863804 None:intergenic
TCAGCAGACTCCTCCATCAC+AGG 0.530698 8_2:-861570 None:intergenic
ACCAGAGCAACCATGGGTAG+AGG 0.533404 8_2:+856431 Msa1226470:exon
GGTTATTTGTAGGTTGCTGA+AGG 0.535471 8_2:+856939 Msa1226470:intron
GTTGCGTTGAACTTCTCGGT+TGG 0.536011 8_2:+862286 Msa1226470:CDS
TGATGCCGAGTTTGGTGAAA+AGG 0.538887 8_2:+863212 Msa1226470:CDS
CAACTGAAAATGACCTCGGT+TGG 0.539529 8_2:+862313 Msa1226470:CDS
TTCCTTGTAATAAGAATCAA+AGG 0.539742 8_2:-856597 None:intergenic
CGTGCATTCACTTCGCGCTG+AGG 0.542110 8_2:+856841 Msa1226470:CDS
CCACAACTTATTCGTCGGCC+AGG 0.547313 8_2:+860688 Msa1226470:CDS
ATCTTCCAAATCATCTGTAT+GGG 0.548339 8_2:-861978 None:intergenic
TTGTAATAAGAATCAAAGGA+AGG 0.549320 8_2:-856593 None:intergenic
TGGAAAGAATCACACTTCTA+CGG 0.550513 8_2:-861422 None:intergenic
AGTAACAATTAGGTTGGCTG+TGG 0.551773 8_2:-859041 None:intergenic
ATCACACTTCTACGGAACTT+GGG 0.552405 8_2:-861414 None:intergenic
TCCTGATAGCATTTGCCAGA+AGG 0.552899 8_2:-861453 None:intergenic
TCGTGACCTTCCTCTACCCA+TGG 0.553571 8_2:-856441 None:intergenic
TTTATCTTTACTCAAAATCG+GGG 0.553832 8_2:+860252 Msa1226470:CDS
TACTTAGAACCAGGGAGTCA+GGG 0.554184 8_2:-863779 None:intergenic
TGTAATAAGAATCAAAGGAA+GGG 0.556130 8_2:-856592 None:intergenic
AAATGGCTCTTCTGGGCAGG+TGG 0.556454 8_2:+863520 Msa1226470:CDS
ATACACCAATCCACAAAAGC+AGG 0.557146 8_2:+858793 Msa1226470:CDS
TGCACAAAACACAGCAGAGA+AGG 0.560171 8_2:+862054 Msa1226470:CDS
AGCTTCCACAACTTATTCGT+CGG 0.560441 8_2:+860683 Msa1226470:CDS
TCATCAAACCAGAGCAACCA+TGG 0.560896 8_2:+856424 Msa1226470:exon
CTGTGCGATGTCCCGTGTAG+TGG 0.563031 8_2:+859163 Msa1226470:CDS
AATTGGAAATATCACAAGAC+AGG 0.565338 8_2:+858184 Msa1226470:CDS
CTATGTTGGAGGTGAAGCAC+AGG 0.566402 8_2:+863556 Msa1226470:CDS
ATCCTCATGCAATGCTCTAG+AGG 0.566410 8_2:-861609 None:intergenic
GAATGCCAAGCAAAGTTCCC+GGG 0.567018 8_2:-856999 None:intergenic
TTCTGCAGGAATTCAGGGAT+GGG 0.568230 8_2:+859297 Msa1226470:intron
TTCCCGGGATACCAGGGCAA+AGG 0.568734 8_2:-856984 None:intergenic
CATGAAGCACAACATTTCCC+AGG 0.569181 8_2:+859067 Msa1226470:CDS
TTTCTGCAGGAATTCAGGGA+TGG 0.570795 8_2:+859296 Msa1226470:intron
AAAGCTGCTGTGAGTTAGAG+AGG 0.571057 8_2:+863617 Msa1226470:exon
ATGAATTGATCCCATTCTTG+TGG 0.571295 8_2:-856635 None:intergenic
GTTATGTATGGAAGAATAAG+GGG 0.573543 8_2:-863111 None:intergenic
ACAAAGGAGTACTTAGAACC+AGG 0.576389 8_2:-863788 None:intergenic
GAATTGATTCTAAATGATGC+AGG 0.577108 8_2:-856680 None:intergenic
AAGGTCACGAACTCAAAGAA+AGG 0.577671 8_2:+856454 Msa1226470:CDS
TTCGTAAGGCACCTGATATG+TGG 0.580986 8_2:+859197 Msa1226470:CDS
AAAAGAAAGCTACAATATCA+GGG 0.582226 8_2:+862085 Msa1226470:CDS
ATAGCAATCGGATGCTGGAG+GGG 0.584256 8_2:+863416 Msa1226470:CDS
CTGGTTTGATGATGCAGTTG+TGG 0.584330 8_2:-856413 None:intergenic
TGCTGAAGGAGGTGAGACAG+AGG 0.584654 8_2:+856953 Msa1226470:CDS
TATCAATGTTTCGTGTAACA+AGG 0.585607 8_2:-862213 None:intergenic
AATAGCAATCGGATGCTGGA+GGG 0.585812 8_2:+863415 Msa1226470:CDS
GGAATTCAGGGATGGGACAA+GGG 0.587424 8_2:+859304 Msa1226470:intron
AATTCCTCTAACTATGTTGG+AGG 0.587774 8_2:+863545 Msa1226470:CDS
GTCCTCTAACACGTGAAGAA+CGG 0.593200 8_2:+862002 Msa1226470:CDS
TGGAGATGGTACACTTCGTA+AGG 0.594241 8_2:+859183 Msa1226470:CDS
TATTTGTAGGTTGCTGAAGG+AGG 0.594800 8_2:+856942 Msa1226470:intron
GAACACGATCAAATAACAGT+TGG 0.595675 8_2:-859141 None:intergenic
GCAAAGTTCCCGGGATACCA+GGG 0.600427 8_2:-856990 None:intergenic
CTATGTCTCCAAGTCAGTCA+AGG 0.602696 8_2:+862258 Msa1226470:CDS
GAAAGACAAACAGCACGAGA+AGG 0.602807 8_2:+863045 Msa1226470:CDS
CTTATTGCCTGGTTGTTGCG+TGG 0.607662 8_2:+863242 Msa1226470:CDS
AAAGCAGGATCACTGCCTGA+TGG 0.612819 8_2:+858808 Msa1226470:CDS
CAATAGCAATCGGATGCTGG+AGG 0.613159 8_2:+863414 Msa1226470:CDS
CCTGGCCGACGAATAAGTTG+TGG 0.613657 8_2:-860688 None:intergenic
AGACAAACAGCACGAGAAGG+TGG 0.614134 8_2:+863048 Msa1226470:CDS
GCTCCAGTGTTCTGATCATG+AGG 0.618002 8_2:-861636 None:intergenic
GCTTAGGAAGAATCAAACAT+TGG 0.618665 8_2:+857040 Msa1226470:CDS
TCCTATTGAAAATGAAGCTG+TGG 0.620217 8_2:+860306 Msa1226470:CDS
ATGCCTCATGATCAGAACAC+TGG 0.621782 8_2:+861633 Msa1226470:CDS
GATGTCCCGTGTAGTGGAGA+TGG 0.622673 8_2:+859169 Msa1226470:CDS
GGAAGATGACATTACTAGTG+TGG 0.624217 8_2:+861506 Msa1226470:CDS
AGGTATATGACAAGAGCAGT+TGG 0.624400 8_2:+861370 Msa1226470:intron
ACTAGAGAATCCTGTGATGG+AGG 0.624811 8_2:+861560 Msa1226470:CDS
CAAAGGAGTACTTAGAACCA+GGG 0.627661 8_2:-863787 None:intergenic
GATGATATCCGGAAAGCACA+TGG 0.628461 8_2:-863078 None:intergenic
CTGTCTCAGTAACTAATGCA+AGG 0.629444 8_2:-863755 None:intergenic
GAGCAACCATGGGTAGAGGA+AGG 0.629891 8_2:+856435 Msa1226470:exon
CAATATCAGGGCAAATGGAG+AGG 0.631567 8_2:+862097 Msa1226470:CDS
ATAATAACCACGCAACAACC+AGG 0.639292 8_2:-863249 None:intergenic
ATTCTAAATGATGCAGGCAA+TGG 0.639368 8_2:-856674 None:intergenic
CATATGAGACTACCTGGCAG+AGG 0.641063 8_2:-861690 None:intergenic
TTCCTCTAGAGCATTGCATG+AGG 0.643867 8_2:+861607 Msa1226470:CDS
GAATGCACATCCAAGAATAG+GGG 0.644846 8_2:-858591 None:intergenic
CATCAAACCAGAGCAACCAT+GGG 0.648138 8_2:+856425 Msa1226470:exon
ACGTGAAGAACGGAATTCTG+AGG 0.648938 8_2:+862012 Msa1226470:CDS
GCCAGGTCTCAAGAAATGGA+AGG 0.649652 8_2:+860705 Msa1226470:CDS
TAGTAATTGTAATGTTGACA+TGG 0.651091 8_2:+861485 Msa1226470:CDS
TGCACATCCAAGAATAGGGG+AGG 0.651957 8_2:-858588 None:intergenic
AGCACTAGAGAATCCTGTGA+TGG 0.653225 8_2:+861557 Msa1226470:CDS
AAGCTGCTGTGAGTTAGAGA+GGG 0.654500 8_2:+863618 Msa1226470:exon
AGTGTACCATCTCCACTACA+CGG 0.655332 8_2:-859175 None:intergenic
GTGTACCATCTCCACTACAC+GGG 0.658766 8_2:-859174 None:intergenic
AATTATACAGGCATCTCCCG+AGG 0.660476 8_2:+863140 Msa1226470:CDS
GGAAGAATCAAACATTGGAG+AGG 0.660823 8_2:+857045 Msa1226470:CDS
GTAAGGCACCTGATATGTGG+CGG 0.665415 8_2:+859200 Msa1226470:CDS
GCTTTCCGGATATCATCCGA+AGG 0.673685 8_2:+863084 Msa1226470:CDS
ACCTAGCAAACAGAGTCTTG+AGG 0.674715 8_2:+861868 Msa1226470:CDS
TGTGATGGAGGAGTCTGCTG+AGG 0.678814 8_2:+861572 Msa1226470:CDS
AAATGAAGCTGTGGTTGCAG+AGG 0.679409 8_2:+860315 Msa1226470:CDS
GTCCATTGCAGAGACCATCA+CGG 0.681705 8_2:-863453 None:intergenic
TTATCTTTACTCAAAATCGG+GGG 0.696495 8_2:+860253 Msa1226470:CDS
TCAGCAACTGAAAATGACCT+CGG 0.702374 8_2:+862309 Msa1226470:CDS
AGTCGTCAAAGCAGTTCCAG+AGG 0.703422 8_2:+861934 Msa1226470:CDS
AAACATCTTCATGCCAACCG+AGG 0.713060 8_2:-862326 None:intergenic
TGCCTTCGAAACTAACGACG+AGG 0.720498 8_2:-863955 None:intergenic
GTTTCAGATGAATTCATGTG+CGG 0.725014 8_2:-861902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATAAGTAATATTTTCT+GGG + chr8_2:857428-857447 Msa1226470:intron 10.0%
!!! ATAATTTTAATTTCAGTTAA+TGG - chr8_2:858055-858074 None:intergenic 10.0%
!!! TAAGTCTTAAAAAATATTTT+AGG - chr8_2:859270-859289 None:intergenic 10.0%
!!! GAATATTTTACATATATTTT+AGG + chr8_2:859370-859389 Msa1226470:intron 10.0%
!! AATTATTATTTATTCAAATC+AGG - chr8_2:862443-862462 None:intergenic 10.0%
!! TAAATCTATTATTATTTGAA+TGG + chr8_2:862924-862943 Msa1226470:intron 10.0%
!! TGATTATAATTTATGTGAAT+TGG + chr8_2:856918-856937 Msa1226470:intron 15.0%
!!! GTATAATAAGTAATATTTTC+TGG + chr8_2:857427-857446 Msa1226470:intron 15.0%
!! TTAAAAAGATATCAATATCA+GGG + chr8_2:857536-857555 Msa1226470:intron 15.0%
!! AAAATAAAGCATGTAATATT+GGG - chr8_2:857609-857628 None:intergenic 15.0%
!! AAAAATAAAGCATGTAATAT+TGG - chr8_2:857610-857629 None:intergenic 15.0%
!! AGACATAAATAAATTCTTAA+AGG - chr8_2:858543-858562 None:intergenic 15.0%
!!! AATAGTTTGCTAAAATTATT+GGG + chr8_2:858898-858917 Msa1226470:intron 15.0%
!! AATGTATTAAAATCAAAACT+CGG - chr8_2:860783-860802 None:intergenic 15.0%
!! CAATTACATTAAAAAATCAT+TGG - chr8_2:860958-860977 None:intergenic 15.0%
!!! CAATGATTTTTTAATGTAAT+TGG + chr8_2:860956-860975 Msa1226470:intron 15.0%
!!! AACAGTATAAAGAATTTTTA+TGG + chr8_2:862160-862179 Msa1226470:CDS 15.0%
!!! TTCATATCTTTTTTTTTTTG+AGG + chr8_2:862682-862701 Msa1226470:intron 15.0%
!!! TCATATCTTTTTTTTTTTGA+GGG + chr8_2:862683-862702 Msa1226470:intron 15.0%
!!! TATTTTTGACATAATTTGTA+AGG + chr8_2:862720-862739 Msa1226470:intron 15.0%
!!! ATTTATGTTATTGCATTTTA+TGG + chr8_2:863679-863698 Msa1226470:three_prime_UTR 15.0%
!!! ATTTTATCATTTAACATTCA+CGG - chr8_2:863929-863948 None:intergenic 15.0%
!!! AAATGAATTTTGTGTTTGTT+TGG + chr8_2:856764-856783 Msa1226470:intron 20.0%
!!! TGAGGTATTAAAAATGATTA+TGG + chr8_2:856859-856878 Msa1226470:intron 20.0%
!! GTCAAATAAACAAGTTAATT+AGG - chr8_2:857454-857473 None:intergenic 20.0%
!! GTTAAAAAGATATCAATATC+AGG + chr8_2:857535-857554 Msa1226470:intron 20.0%
!! TAAAAAGATATCAATATCAG+GGG + chr8_2:857537-857556 Msa1226470:intron 20.0%
!!! ATATTAAACTAATTTAGCTC+TGG + chr8_2:857872-857891 Msa1226470:intron 20.0%
!! TTAAAGCTAGAAAATGAAAT+TGG + chr8_2:858167-858186 Msa1226470:CDS 20.0%
!! CTAAAACAAAGAAAAATGAA+AGG - chr8_2:858729-858748 None:intergenic 20.0%
!! ACAATCAAAGCAATTAAAAA+TGG - chr8_2:858861-858880 None:intergenic 20.0%
!!! CAATAGTTTGCTAAAATTAT+TGG + chr8_2:858897-858916 Msa1226470:intron 20.0%
!!! CTAGTTTCTTATTTGTAATT+AGG + chr8_2:858955-858974 Msa1226470:intron 20.0%
!!! TTTCATAATTCCCTTTTAAA+CGG - chr8_2:859096-859115 None:intergenic 20.0%
!!! CAAATGATTACAAAGTTTTT+AGG - chr8_2:859662-859681 None:intergenic 20.0%
!! ATTTAGTCACAAAAAGTTAA+TGG + chr8_2:859816-859835 Msa1226470:intron 20.0%
!!! ATCCATAAATTTTATGAACA+CGG - chr8_2:860482-860501 None:intergenic 20.0%
!!! TTATTAGATTTTCATGTACT+GGG - chr8_2:860562-860581 None:intergenic 20.0%
!!! ACTAAAACTTTAGAATGTAT+AGG - chr8_2:860835-860854 None:intergenic 20.0%
!!! TATACATTCTAAAGTTTTAG+TGG + chr8_2:860834-860853 Msa1226470:intron 20.0%
!! GTATCATTGCATAATATTAA+AGG - chr8_2:860886-860905 None:intergenic 20.0%
!!! TTAAAGTTGTTTGATTTTTG+AGG + chr8_2:861344-861363 Msa1226470:intron 20.0%
!! AAAATGAATATATACGAACT+TGG - chr8_2:861788-861807 None:intergenic 20.0%
!!! TCGTATATATTCATTTTAAC+TGG + chr8_2:861791-861810 Msa1226470:intron 20.0%
!!! AGACTTTTTTTATTACATGA+TGG + chr8_2:862397-862416 Msa1226470:intron 20.0%
!! TTTATTCAAATCAGGAAAAT+GGG - chr8_2:862435-862454 None:intergenic 20.0%
!! ATTTATTCAAATCAGGAAAA+TGG - chr8_2:862436-862455 None:intergenic 20.0%
!! TCAAAGATAATTATATCTCT+TGG + chr8_2:862539-862558 Msa1226470:intron 20.0%
!!! TTTTATCATTTAACATTCAC+GGG - chr8_2:863928-863947 None:intergenic 20.0%
!! AGTAGTAGTTTGAGAATTTT+CGG - chr8_2:856546-856565 None:intergenic 25.0%
! TGTAATAAGAATCAAAGGAA+GGG - chr8_2:856595-856614 None:intergenic 25.0%
! TTGTAATAAGAATCAAAGGA+AGG - chr8_2:856596-856615 None:intergenic 25.0%
! TTCCTTTGATTCTTATTACA+AGG + chr8_2:856595-856614 Msa1226470:CDS 25.0%
! TTCCTTGTAATAAGAATCAA+AGG - chr8_2:856600-856619 None:intergenic 25.0%
!! CATCATTTAGAATCAATTCT+AGG + chr8_2:856684-856703 Msa1226470:CDS 25.0%
! TATGTGAATTGGTTATTTGT+AGG + chr8_2:856929-856948 Msa1226470:intron 25.0%
!!! ATAGAACCAACAAAAGTATT+AGG + chr8_2:857116-857135 Msa1226470:intron 25.0%
!!! TAGAACCAACAAAAGTATTA+GGG + chr8_2:857117-857136 Msa1226470:intron 25.0%
!! AATATCCCTAATACTTTTGT+TGG - chr8_2:857125-857144 None:intergenic 25.0%
!! TCCCTAAATCATTTTCTAAA+GGG - chr8_2:857822-857841 None:intergenic 25.0%
!! ATCCCTAAATCATTTTCTAA+AGG - chr8_2:857823-857842 None:intergenic 25.0%
!!! TTTCTAGCTTTAAAAATTCG+TGG - chr8_2:858160-858179 None:intergenic 25.0%
! GATTGAAAGAGAATATAAAG+TGG - chr8_2:858230-858249 None:intergenic 25.0%
! AATCTTCATGATCATACAAA+AGG + chr8_2:858246-858265 Msa1226470:intron 25.0%
! ATATATTACAGAGTTTACAC+AGG + chr8_2:858352-858371 Msa1226470:intron 25.0%
! TGATACTTTAACAGAAATCA+CGG + chr8_2:858435-858454 Msa1226470:intron 25.0%
!!! CTAATGTTTGTTTTTGACAT+AGG + chr8_2:858563-858582 Msa1226470:intron 25.0%
!! CTTTGATTGTCAATTGTTTT+TGG + chr8_2:858871-858890 Msa1226470:intron 25.0%
! ATGATTAGTAACAATTAGGT+TGG - chr8_2:859050-859069 None:intergenic 25.0%
! CTTCATGATTAGTAACAATT+AGG - chr8_2:859054-859073 None:intergenic 25.0%
! AAAAGGGAATTATGAAAGAA+TGG + chr8_2:859099-859118 Msa1226470:CDS 25.0%
!!! GCTTTTTCCAATTAGAAAAT+TGG + chr8_2:859460-859479 Msa1226470:intron 25.0%
!! CCTATTACCAATTTTCTAAT+TGG - chr8_2:859470-859489 None:intergenic 25.0%
!! CCAATTAGAAAATTGGTAAT+AGG + chr8_2:859467-859486 Msa1226470:intron 25.0%
!!! TTACAAAGTTTTTAGGATGA+GGG - chr8_2:859655-859674 None:intergenic 25.0%
!!! ATTACAAAGTTTTTAGGATG+AGG - chr8_2:859656-859675 None:intergenic 25.0%
! TAACTATGACAAATCTAGTT+TGG - chr8_2:859770-859789 None:intergenic 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr8_2:859906-859925 None:intergenic 25.0%
! TATAAGGAGCAATATTAATC+TGG - chr8_2:859918-859937 None:intergenic 25.0%
!!! TTGCTCCTTATATGTTTTAA+AGG + chr8_2:859926-859945 Msa1226470:intron 25.0%
!!! TGCTCCTTATATGTTTTAAA+GGG + chr8_2:859927-859946 Msa1226470:intron 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr8_2:859906-859925 None:intergenic 25.0%
!!! TCTTTAAAACATATAAGGAG+CGG - chr8_2:860009-860028 None:intergenic 25.0%
!!! TGTGCTCTTTAAAACATATA+AGG - chr8_2:860014-860033 None:intergenic 25.0%
!!! AAAAACATTATTTTGCAGCA+AGG + chr8_2:860112-860131 Msa1226470:intron 25.0%
!! ATTATGTTGCTTACATATCT+AGG + chr8_2:860146-860165 Msa1226470:intron 25.0%
! GATAATCAATATAGTTGTTG+AGG - chr8_2:860227-860246 None:intergenic 25.0%
!! ACAACTATATTGATTATCTC+AGG + chr8_2:860229-860248 Msa1226470:intron 25.0%
! GGTTTATCTTTACTCAAAAT+CGG + chr8_2:860250-860269 Msa1226470:intron 25.0%
! GTTTATCTTTACTCAAAATC+GGG + chr8_2:860251-860270 Msa1226470:CDS 25.0%
! TTTATCTTTACTCAAAATCG+GGG + chr8_2:860252-860271 Msa1226470:CDS 25.0%
! TACCGTGTTCATAAAATTTA+TGG + chr8_2:860477-860496 Msa1226470:intron 25.0%
!! TTTTTCTAAGTGTGTATGTA+AGG - chr8_2:860508-860527 None:intergenic 25.0%
! CACTTAGAAAAAATTCAACA+CGG + chr8_2:860516-860535 Msa1226470:intron 25.0%
!! CTTATTAGATTTTCATGTAC+TGG - chr8_2:860563-860582 None:intergenic 25.0%
! CAGTACATGAAAATCTAATA+AGG + chr8_2:860561-860580 Msa1226470:intron 25.0%
! ATTAAAATCAAAACTCGGTT+TGG - chr8_2:860778-860797 None:intergenic 25.0%
!!! AGGATTTTGAAGGAAAATAA+TGG + chr8_2:860913-860932 Msa1226470:intron 25.0%
!!! GGATTTTGAAGGAAAATAAT+GGG + chr8_2:860914-860933 Msa1226470:intron 25.0%
!! ATGTAATTGGTGTTTCATAT+AGG + chr8_2:860969-860988 Msa1226470:intron 25.0%
!! TGTAATTGGTGTTTCATATA+GGG + chr8_2:860970-860989 Msa1226470:intron 25.0%
! GTTAATGTAAGCATATTGAT+GGG - chr8_2:861143-861162 None:intergenic 25.0%
! TGTTAATGTAAGCATATTGA+TGG - chr8_2:861144-861163 None:intergenic 25.0%
! TTATGGCTTCAAATATAGAA+GGG + chr8_2:861276-861295 Msa1226470:intron 25.0%
! TAGTAATTGTAATGTTGACA+TGG + chr8_2:861485-861504 Msa1226470:CDS 25.0%
! GAAAATGAAAAAACTGAAGA+TGG + chr8_2:861528-861547 Msa1226470:CDS 25.0%
!! ACTAAATAGTCAGGAAATTT+TGG + chr8_2:861744-861763 Msa1226470:intron 25.0%
!!! TCAGGAAATTTTGGTTAATA+AGG + chr8_2:861753-861772 Msa1226470:intron 25.0%
!!! CAGGAAATTTTGGTTAATAA+GGG + chr8_2:861754-861773 Msa1226470:intron 25.0%
! TAAAAGAAAGCTACAATATC+AGG + chr8_2:862084-862103 Msa1226470:CDS 25.0%
! AAAAGAAAGCTACAATATCA+GGG + chr8_2:862085-862104 Msa1226470:CDS 25.0%
!! CATCTTTAAAAAAGACAACA+GGG - chr8_2:862129-862148 None:intergenic 25.0%
!! TCATCTTTAAAAAAGACAAC+AGG - chr8_2:862130-862149 None:intergenic 25.0%
! CAAGTTCATTAAATGATCTA+TGG - chr8_2:862592-862611 None:intergenic 25.0%
!!! ATAATTTGCTTGGTTATGTA+TGG - chr8_2:863126-863145 None:intergenic 25.0%
!! GTTATTGCATTTTATGGAAA+TGG + chr8_2:863685-863704 Msa1226470:three_prime_UTR 25.0%
ATTCTCAAACTACTACTCAT+TGG + chr8_2:856549-856568 Msa1226470:CDS 30.0%
TAATTGTTGATCCACAAGAA+TGG + chr8_2:856624-856643 Msa1226470:CDS 30.0%
AATTGTTGATCCACAAGAAT+GGG + chr8_2:856625-856644 Msa1226470:CDS 30.0%
! GAATTGATTCTAAATGATGC+AGG - chr8_2:856683-856702 None:intergenic 30.0%
! CACGAAATCATTTTCCAATT+GGG - chr8_2:856825-856844 None:intergenic 30.0%
!!! ATCCAAAATTCTGTTTTAGC+GGG - chr8_2:857324-857343 None:intergenic 30.0%
!! CATCCAAAATTCTGTTTTAG+CGG - chr8_2:857325-857344 None:intergenic 30.0%
TAGAATAGTAGCAGACTATT+TGG + chr8_2:857646-857665 Msa1226470:intron 30.0%
AGTCATACCATGTAGAAATA+AGG - chr8_2:857781-857800 None:intergenic 30.0%
! TCCCCTTTAGAAAATGATTT+AGG + chr8_2:857817-857836 Msa1226470:intron 30.0%
!! CCCTAAATCATTTTCTAAAG+GGG - chr8_2:857821-857840 None:intergenic 30.0%
! CCCCTTTAGAAAATGATTTA+GGG + chr8_2:857818-857837 Msa1226470:intron 30.0%
AATTGGAAATATCACAAGAC+AGG + chr8_2:858184-858203 Msa1226470:CDS 30.0%
! TTTTGTTCTAGTACTCTGAA+TGG + chr8_2:858276-858295 Msa1226470:intron 30.0%
TAAAAAGTAGCAGTAACCTA+CGG - chr8_2:858310-858329 None:intergenic 30.0%
GAATTGAAAGAAAAGTGAAG+AGG + chr8_2:858374-858393 Msa1226470:intron 30.0%
CAAATTAAGCAAATCGAATC+AGG - chr8_2:858682-858701 None:intergenic 30.0%
!! AATTGGAATGTTTTTGAACC+TGG - chr8_2:858763-858782 None:intergenic 30.0%
!! TGGACATTCTTTTTGTTTGA+TGG - chr8_2:859024-859043 None:intergenic 30.0%
GGTTGTAAAGAAAGTAGAAT+TGG - chr8_2:859249-859268 None:intergenic 30.0%
!!! AGACTTATTTTACTTTCTGC+AGG + chr8_2:859283-859302 Msa1226470:intron 30.0%
GCATAGCAATTAAAACTTGT+AGG - chr8_2:859338-859357 None:intergenic 30.0%
! AAATTGGTAATAGGCAATGA+AGG + chr8_2:859476-859495 Msa1226470:intron 30.0%
!! GATGACTTTGATTTTAATCC+TGG + chr8_2:859536-859555 Msa1226470:intron 30.0%
TTTATTGCAAATCTTTCTCG+AGG + chr8_2:859587-859606 Msa1226470:intron 30.0%
!!! TACAAAGTTTTTAGGATGAG+GGG - chr8_2:859654-859673 None:intergenic 30.0%
CACAAAATTAACCCATTATC+AGG - chr8_2:859722-859741 None:intergenic 30.0%
CTAGATTTGTCATAGTTATC+TGG + chr8_2:859772-859791 Msa1226470:intron 30.0%
GGTTACAAATTTCAAACAGA+AGG - chr8_2:859860-859879 None:intergenic 30.0%
!! TGTGCCCTTTAAAACATATA+AGG - chr8_2:859934-859953 None:intergenic 30.0%
TTATCTTTACTCAAAATCGG+GGG + chr8_2:860253-860272 Msa1226470:CDS 30.0%
AAAATTCAACACGGAGAAAT+AGG + chr8_2:860525-860544 Msa1226470:intron 30.0%
AAAGAGGGGATAAAGAAAAA+TGG - chr8_2:860601-860620 None:intergenic 30.0%
!!! TAAAGTTTTAGTGGATTCCT+GGG + chr8_2:860843-860862 Msa1226470:intron 30.0%
TATGCAATGATACAATCTGA+AGG + chr8_2:860893-860912 Msa1226470:intron 30.0%
! TACAATCTGAAGGATTTTGA+AGG + chr8_2:860903-860922 Msa1226470:intron 30.0%
!! TTTTGAAGGAAAATAATGGG+TGG + chr8_2:860917-860936 Msa1226470:intron 30.0%
!! TTTGCTGATTTGCATTTGTT+TGG + chr8_2:861061-861080 Msa1226470:intron 30.0%
AATTCTGACATTCAATCAGT+TGG + chr8_2:861114-861133 Msa1226470:intron 30.0%
TGCTTACATTAACACATTGA+TGG + chr8_2:861150-861169 Msa1226470:intron 30.0%
CTTATGGCTTCAAATATAGA+AGG + chr8_2:861275-861294 Msa1226470:intron 30.0%
TTATTACATATGAGACTACC+TGG - chr8_2:861699-861718 None:intergenic 30.0%
! TTATCATTCACATTTTCCTC+TGG - chr8_2:861953-861972 None:intergenic 30.0%
ATCTTCCAAATCATCTGTAT+GGG - chr8_2:861981-862000 None:intergenic 30.0%
TATCTTCCAAATCATCTGTA+TGG - chr8_2:861982-862001 None:intergenic 30.0%
! TATTGTAGCTTTCTTTTACC+TGG - chr8_2:862082-862101 None:intergenic 30.0%
TATCAATGTTTCGTGTAACA+AGG - chr8_2:862216-862235 None:intergenic 30.0%
CTAGTATCTAACTCTAATAG+AGG - chr8_2:862565-862584 None:intergenic 30.0%
!!! AACTTGAGTACTTGTTTTGT+TGG + chr8_2:862606-862625 Msa1226470:intron 30.0%
!! AACTGCATGTTGAGTTTTAT+TGG + chr8_2:862639-862658 Msa1226470:intron 30.0%
GAATGACACATAGAAGAATT+AGG - chr8_2:862796-862815 None:intergenic 30.0%
! GTACTAAATTAGTTTCGTCA+AGG + chr8_2:862890-862909 Msa1226470:intron 30.0%
ACTTATATCTCACTCATTCA+TGG - chr8_2:862959-862978 None:intergenic 30.0%
TATTACTGCTTGTGAATAAC+TGG + chr8_2:862993-863012 Msa1226470:intron 30.0%
ATTACTGCTTGTGAATAACT+GGG + chr8_2:862994-863013 Msa1226470:intron 30.0%
TTGTCTTTCCTGTAAGATAA+GGG - chr8_2:863034-863053 None:intergenic 30.0%
TTTGTCTTTCCTGTAAGATA+AGG - chr8_2:863035-863054 None:intergenic 30.0%
GTTATGTATGGAAGAATAAG+GGG - chr8_2:863114-863133 None:intergenic 30.0%
GGTTATGTATGGAAGAATAA+GGG - chr8_2:863115-863134 None:intergenic 30.0%
TGGTTATGTATGGAAGAATA+AGG - chr8_2:863116-863135 None:intergenic 30.0%
CATAACCAAGCAAATTATAC+AGG + chr8_2:863128-863147 Msa1226470:CDS 30.0%
! TTATGGGTAAAGGTATGTAT+CGG + chr8_2:863268-863287 Msa1226470:intron 30.0%
ATGTCAATGTCAATGTCAAT+GGG - chr8_2:863321-863340 None:intergenic 30.0%
TATGTCAATGTCAATGTCAA+TGG - chr8_2:863322-863341 None:intergenic 30.0%
!! ATTTAGGATTGAATTTTCCC+AGG - chr8_2:863726-863745 None:intergenic 30.0%
TGCAAGGTTCACATAAATTT+AGG - chr8_2:863742-863761 None:intergenic 30.0%
GAGTATGAGTACTAATACAA+AGG - chr8_2:863807-863826 None:intergenic 30.0%
GTCAAAACAGAGAAAACGTT+TGG + chr8_2:856483-856502 Msa1226470:CDS 35.0%
! AATTTTCGGAGGATAAGGAA+GGG - chr8_2:856532-856551 None:intergenic 35.0%
! TTGAGAATTTTCGGAGGATA+AGG - chr8_2:856537-856556 None:intergenic 35.0%
! AGTAGTTTGAGAATTTTCGG+AGG - chr8_2:856543-856562 None:intergenic 35.0%
ATGAATTGATCCCATTCTTG+TGG - chr8_2:856638-856657 None:intergenic 35.0%
ATTCTAAATGATGCAGGCAA+TGG - chr8_2:856677-856696 None:intergenic 35.0%
TGATGATATTCGTTCCCAAT+TGG + chr8_2:856808-856827 Msa1226470:CDS 35.0%
! GCACGAAATCATTTTCCAAT+TGG - chr8_2:856826-856845 None:intergenic 35.0%
! CTTGGCATTCAAATTTTTCG+CGG + chr8_2:857012-857031 Msa1226470:CDS 35.0%
GCTTAGGAAGAATCAAACAT+TGG + chr8_2:857040-857059 Msa1226470:CDS 35.0%
TTAAGGAAGGGAAGAACATT+TGG - chr8_2:857291-857310 None:intergenic 35.0%
GTTCTTCCCTTCCTTAATAT+AGG + chr8_2:857294-857313 Msa1226470:intron 35.0%
!!! AAAATTCTGTTTTAGCGGGA+AGG - chr8_2:857320-857339 None:intergenic 35.0%
! TTCCCGCTAAAACAGAATTT+TGG + chr8_2:857319-857338 Msa1226470:intron 35.0%
!! CTTAGTGTTTTGCTATCCAT+TGG + chr8_2:857483-857502 Msa1226470:intron 35.0%
!! TGCTATCCATTGGTTTGAAA+TGG + chr8_2:857493-857512 Msa1226470:intron 35.0%
!! GCTATCCATTGGTTTGAAAT+GGG + chr8_2:857494-857513 Msa1226470:intron 35.0%
!! GATCTGTCCTTATTTCTACA+TGG + chr8_2:857771-857790 Msa1226470:intron 35.0%
TTACATATAGCCCTTGAAGT+TGG + chr8_2:857924-857943 Msa1226470:intron 35.0%
TGAGAATTTAGCAGAATCAG+AGG - chr8_2:858133-858152 None:intergenic 35.0%
TCTGATTCTGCTAAATTCTC+AGG + chr8_2:858132-858151 Msa1226470:intron 35.0%
AAAAAGTAGCAGTAACCTAC+GGG - chr8_2:858309-858328 None:intergenic 35.0%
TTGAAAGAAAAGTGAAGAGG+CGG + chr8_2:858377-858396 Msa1226470:intron 35.0%
TGTTGCGTAGTGATAATCTA+CGG + chr8_2:858459-858478 Msa1226470:intron 35.0%
TGAATGCACATCCAAGAATA+GGG - chr8_2:858595-858614 None:intergenic 35.0%
GCTTACTGTCAAGTACAAAA+TGG - chr8_2:858620-858639 None:intergenic 35.0%
GAACACGATCAAATAACAGT+TGG - chr8_2:859144-859163 None:intergenic 35.0%
TTTACTTTCTGCAGGAATTC+AGG + chr8_2:859291-859310 Msa1226470:intron 35.0%
TTACTTTCTGCAGGAATTCA+GGG + chr8_2:859292-859311 Msa1226470:intron 35.0%
!!! CAAGTTTTAATTGCTATGCG+AGG + chr8_2:859339-859358 Msa1226470:CDS 35.0%
CACAGTGAAAACACTAGATA+AGG - chr8_2:859427-859446 None:intergenic 35.0%
TTCACTGTGCTCAAATTTGT+TGG + chr8_2:859438-859457 Msa1226470:intron 35.0%
ATCGAAATTTCTTGAGCAAG+AGG - chr8_2:859519-859538 None:intergenic 35.0%
ACGTAAGTCTAACCTGATAA+TGG + chr8_2:859707-859726 Msa1226470:intron 35.0%
CGTAAGTCTAACCTGATAAT+GGG + chr8_2:859708-859727 Msa1226470:intron 35.0%
TTTGTCATAGTTATCTGGCA+TGG + chr8_2:859777-859796 Msa1226470:intron 35.0%
! TTCAGTTTTCACTCAATGGT+AGG - chr8_2:859881-859900 None:intergenic 35.0%
! GGTTTTCAGTTTTCACTCAA+TGG - chr8_2:859885-859904 None:intergenic 35.0%
TATAAGGAGCGGTATTAATC+TGG - chr8_2:859998-860017 None:intergenic 35.0%
TTGTATAATGTTGAGCCTCA+AGG + chr8_2:860037-860056 Msa1226470:intron 35.0%
TCCTATTGAAAATGAAGCTG+TGG + chr8_2:860306-860325 Msa1226470:CDS 35.0%
! ACCACAGCTTCATTTTCAAT+AGG - chr8_2:860310-860329 None:intergenic 35.0%
GCACGGTATACTAATTTCTT+AGG + chr8_2:860446-860465 Msa1226470:intron 35.0%
! TAGATTTTCATGTACTGGGT+CGG - chr8_2:860558-860577 None:intergenic 35.0%
ACCTGCAAAACAGTAAAAGA+GGG - chr8_2:860616-860635 None:intergenic 35.0%
AACCTGCAAAACAGTAAAAG+AGG - chr8_2:860617-860636 None:intergenic 35.0%
! TTACTGTTTTGCAGGTTTTG+CGG + chr8_2:860620-860639 Msa1226470:intron 35.0%
!!! CTAAAGTTTTAGTGGATTCC+TGG + chr8_2:860842-860861 Msa1226470:intron 35.0%
TTTGCACTTGATTCAGCTTA+TGG + chr8_2:861259-861278 Msa1226470:intron 35.0%
!!! TTGTTTGATTTTTGAGGTGC+AGG + chr8_2:861350-861369 Msa1226470:intron 35.0%
TGGAAAGAATCACACTTCTA+CGG - chr8_2:861425-861444 None:intergenic 35.0%
! ACTGGACTTTTGCTCATAAT+AGG + chr8_2:861809-861828 Msa1226470:intron 35.0%
GTTTCAGATGAATTCATGTG+CGG - chr8_2:861905-861924 None:intergenic 35.0%
TGTATCCCATACAGATGATT+TGG + chr8_2:861973-861992 Msa1226470:CDS 35.0%
AACAATATCCTTGACTGACT+TGG - chr8_2:862269-862288 None:intergenic 35.0%
TATTGTTGCGTTGAACTTCT+CGG + chr8_2:862282-862301 Msa1226470:CDS 35.0%
!! AGATGCCTGTATAATTTGCT+TGG - chr8_2:863136-863155 None:intergenic 35.0%
TATCGGTGATGAAGAAGAAA+AGG + chr8_2:863285-863304 Msa1226470:intron 35.0%
ACATTGACATATCTGTTGAG+CGG + chr8_2:863331-863350 Msa1226470:intron 35.0%
AAAGTCTTGCAAGCAATTCT+TGG - chr8_2:863481-863500 None:intergenic 35.0%
! GCAAGACTTTTAATACGTCT+AGG + chr8_2:863491-863510 Msa1226470:CDS 35.0%
GACAATTCCTCTAACTATGT+TGG + chr8_2:863542-863561 Msa1226470:CDS 35.0%
AATTCCTCTAACTATGTTGG+AGG + chr8_2:863545-863564 Msa1226470:CDS 35.0%
AAGGTCACGAACTCAAAGAA+AGG + chr8_2:856454-856473 Msa1226470:CDS 40.0%
! GAATTTTCGGAGGATAAGGA+AGG - chr8_2:856533-856552 None:intergenic 40.0%
!!! GAAGGGTTTTGAGTCAAGAA+AGG - chr8_2:856578-856597 None:intergenic 40.0%
GGTTATTTGTAGGTTGCTGA+AGG + chr8_2:856939-856958 Msa1226470:intron 40.0%
TATTTGTAGGTTGCTGAAGG+AGG + chr8_2:856942-856961 Msa1226470:intron 40.0%
GGAAGAATCAAACATTGGAG+AGG + chr8_2:857045-857064 Msa1226470:CDS 40.0%
!!! TTCCTGCTTTTTTCGCTTCT+CGG + chr8_2:857143-857162 Msa1226470:intron 40.0%
! AGTACTGAGTAGTGACAAAC+TGG - chr8_2:857266-857285 None:intergenic 40.0%
GGAAGGCCTATATTAAGGAA+GGG - chr8_2:857303-857322 None:intergenic 40.0%
!! CCATTGGTTTGAAATGGGAA+CGG + chr8_2:857499-857518 Msa1226470:intron 40.0%
TTAAACAATGCACGTGCATG+AGG - chr8_2:857715-857734 None:intergenic 40.0%
TACATGGTATGACTTAGCTC+TGG + chr8_2:857787-857806 Msa1226470:intron 40.0%
AATGACTCCTCCAACTTCAA+GGG - chr8_2:857937-857956 None:intergenic 40.0%
TTGAAGTTGGAGGAGTCATT+GGG + chr8_2:857937-857956 Msa1226470:intron 40.0%
AAGACAGGAAGCTGTTAGTA+TGG + chr8_2:858199-858218 Msa1226470:CDS 40.0%
TGAAAGAAAAGTGAAGAGGC+GGG + chr8_2:858378-858397 Msa1226470:intron 40.0%
GAATGCACATCCAAGAATAG+GGG - chr8_2:858594-858613 None:intergenic 40.0%
CTGAATGCACATCCAAGAAT+AGG - chr8_2:858596-858615 None:intergenic 40.0%
ACTTGACAGTAAGCTACTTC+TGG + chr8_2:858626-858645 Msa1226470:intron 40.0%
! TCAGGACTGGTAAAAAACAG+AGG - chr8_2:858664-858683 None:intergenic 40.0%
TAAGCAAATCGAATCAGGAC+TGG - chr8_2:858677-858696 None:intergenic 40.0%
ATACACCAATCCACAAAAGC+AGG + chr8_2:858793-858812 Msa1226470:CDS 40.0%
ATGACACAAACCATTCCATC+AGG - chr8_2:858826-858845 None:intergenic 40.0%
!! AGTAACAATTAGGTTGGCTG+TGG - chr8_2:859044-859063 None:intergenic 40.0%
!!! TTTTAGGGCTTGTCGTTGTT+AGG + chr8_2:859386-859405 Msa1226470:intron 40.0%
TGGTAATAGGCAATGAAGGT+TGG + chr8_2:859480-859499 Msa1226470:intron 40.0%
TCTTGAGCAAGAGGTCAAAT+TGG - chr8_2:859510-859529 None:intergenic 40.0%
TTGCAAATCTTTCTCGAGGT+TGG + chr8_2:859591-859610 Msa1226470:intron 40.0%
TGCAAATCTTTCTCGAGGTT+GGG + chr8_2:859592-859611 Msa1226470:intron 40.0%
ATTCTGAGTTGTCTTTCCCT+TGG + chr8_2:859617-859636 Msa1226470:intron 40.0%
!!! AAAGTTTTTAGGATGAGGGG+AGG - chr8_2:859651-859670 None:intergenic 40.0%
!! CTTGACTCAGAAAAGTGCTT+TGG + chr8_2:860388-860407 Msa1226470:intron 40.0%
ATTAGTATACCGTGCTTCGA+AGG - chr8_2:860441-860460 None:intergenic 40.0%
CCTGCAAAACAGTAAAAGAG+GGG - chr8_2:860615-860634 None:intergenic 40.0%
AGCTTCCACAACTTATTCGT+CGG + chr8_2:860683-860702 Msa1226470:CDS 40.0%
ACATGATATCCAGAAAACCC+AGG - chr8_2:860863-860882 None:intergenic 40.0%
TTCATATAGGGCAGTAGTTG+TGG + chr8_2:860982-861001 Msa1226470:intron 40.0%
TCATATAGGGCAGTAGTTGT+GGG + chr8_2:860983-861002 Msa1226470:intron 40.0%
TAGTTGTGGGTAAAATACCC+TGG + chr8_2:860996-861015 Msa1226470:intron 40.0%
TCAAAAGCTCGAATCAGAAG+AGG - chr8_2:861037-861056 None:intergenic 40.0%
GCGAAGTTACATGCTAAAGT+TGG - chr8_2:861229-861248 None:intergenic 40.0%
GAATCAAGTGCAAAACCAAC+AGG - chr8_2:861253-861272 None:intergenic 40.0%
AGGTATATGACAAGAGCAGT+TGG + chr8_2:861370-861389 Msa1226470:intron 40.0%
ATCACACTTCTACGGAACTT+GGG - chr8_2:861417-861436 None:intergenic 40.0%
AATCACACTTCTACGGAACT+TGG - chr8_2:861418-861437 None:intergenic 40.0%
CTTTCCAGTATGTTTCCTTC+TGG + chr8_2:861438-861457 Msa1226470:CDS 40.0%
TTTGCCAGAAGGAAACATAC+TGG - chr8_2:861445-861464 None:intergenic 40.0%
GGAAGATGACATTACTAGTG+TGG + chr8_2:861506-861525 Msa1226470:CDS 40.0%
CTCACACACACTAAATAGTC+AGG + chr8_2:861735-861754 Msa1226470:intron 40.0%
TTCCAGAATAGCTGCAAGAA+CGG - chr8_2:861846-861865 None:intergenic 40.0%
! GCTGTGTTTTGTGCATTATG+CGG - chr8_2:862049-862068 None:intergenic 40.0%
AGCTACAATATCAGGGCAAA+TGG + chr8_2:862092-862111 Msa1226470:CDS 40.0%
! GATGAGCGTTTTCCATTTGA+TGG + chr8_2:862187-862206 Msa1226470:CDS 40.0%
GTAACAAGGTGACCATCAAA+TGG - chr8_2:862202-862221 None:intergenic 40.0%
TCAGCAACTGAAAATGACCT+CGG + chr8_2:862309-862328 Msa1226470:CDS 40.0%
CAAATAGCATGCACGTTACA+AGG + chr8_2:862837-862856 Msa1226470:intron 40.0%
GTACTTTGCCCTTATCTTAC+AGG + chr8_2:863023-863042 Msa1226470:intron 40.0%
AAGAATAAGGGGCAATCCTT+CGG - chr8_2:863103-863122 None:intergenic 40.0%
ATAATAACCACGCAACAACC+AGG - chr8_2:863252-863271 None:intergenic 40.0%
TGGTTGTTGCGTGGTTATTA+TGG + chr8_2:863251-863270 Msa1226470:CDS 40.0%
GGTTGTTGCGTGGTTATTAT+GGG + chr8_2:863252-863271 Msa1226470:CDS 40.0%
TGCGTGGTTATTATGGGTAA+AGG + chr8_2:863258-863277 Msa1226470:CDS 40.0%
AACTGTATTCCCTGCAGAAA+AGG - chr8_2:863363-863382 None:intergenic 40.0%
!! TGTTGACTCGTCAACTTTGA+GGG - chr8_2:863396-863415 None:intergenic 40.0%
!! TTGTTGACTCGTCAACTTTG+AGG - chr8_2:863397-863416 None:intergenic 40.0%
GACGAGTCAACAATAGCAAT+CGG + chr8_2:863404-863423 Msa1226470:CDS 40.0%
ATACGTCTAGGCACAGAAAA+TGG + chr8_2:863503-863522 Msa1226470:CDS 40.0%
TTCACCTCCAACATAGTTAG+AGG - chr8_2:863552-863571 None:intergenic 40.0%
!!! TGGTGATTTTTTCCTTCACC+TGG + chr8_2:863705-863724 Msa1226470:three_prime_UTR 40.0%
!!! GGTGATTTTTTCCTTCACCT+GGG + chr8_2:863706-863725 Msa1226470:three_prime_UTR 40.0%
! GATTGAATTTTCCCAGGTGA+AGG - chr8_2:863720-863739 None:intergenic 40.0%
CTGTCTCAGTAACTAATGCA+AGG - chr8_2:863758-863777 None:intergenic 40.0%
!! CAAAGGAGTACTTAGAACCA+GGG - chr8_2:863790-863809 None:intergenic 40.0%
!! ACAAAGGAGTACTTAGAACC+AGG - chr8_2:863791-863810 None:intergenic 40.0%
!! CTGGTTTGATGATGCAGTTG+TGG - chr8_2:856416-856435 None:intergenic 45.0%
TCATCAAACCAGAGCAACCA+TGG + chr8_2:856424-856443 Msa1226470:exon 45.0%
CATCAAACCAGAGCAACCAT+GGG + chr8_2:856425-856444 Msa1226470:exon 45.0%
ATGATGCAGGCAATGGTGTT+CGG - chr8_2:856670-856689 None:intergenic 45.0%
TGAATGCCAAGCAAAGTTCC+CGG - chr8_2:857003-857022 None:intergenic 45.0%
! ATTTTTCGCGGATGCAGCTT+AGG + chr8_2:857024-857043 Msa1226470:CDS 45.0%
GGGAAGGCCTATATTAAGGA+AGG - chr8_2:857304-857323 None:intergenic 45.0%
TAGCGGGAAGGCCTATATTA+AGG - chr8_2:857308-857327 None:intergenic 45.0%
CCGTTCCCATTTCAAACCAA+TGG - chr8_2:857502-857521 None:intergenic 45.0%
AATATCAGGGGATCTCAGTC+AGG + chr8_2:857549-857568 Msa1226470:intron 45.0%
CATATAGCCCTTGAAGTTGG+AGG + chr8_2:857927-857946 Msa1226470:intron 45.0%
CAATGACTCCTCCAACTTCA+AGG - chr8_2:857938-857957 None:intergenic 45.0%
CTTGAAGTTGGAGGAGTCAT+TGG + chr8_2:857936-857955 Msa1226470:intron 45.0%
ATAGGTTCCTCCCCTATTCT+TGG + chr8_2:858581-858600 Msa1226470:intron 45.0%
GGTGTATAGTCTCGAGCAAT+TGG - chr8_2:858780-858799 None:intergenic 45.0%
!! GTGATCCTGCTTTTGTGGAT+TGG - chr8_2:858801-858820 None:intergenic 45.0%
CATGAAGCACAACATTTCCC+AGG + chr8_2:859067-859086 Msa1226470:CDS 45.0%
! TTCCCAGGATGCCGTTTAAA+AGG + chr8_2:859082-859101 Msa1226470:CDS 45.0%
! TCCCAGGATGCCGTTTAAAA+GGG + chr8_2:859083-859102 Msa1226470:CDS 45.0%
! TCCCTTTTAAACGGCATCCT+GGG - chr8_2:859087-859106 None:intergenic 45.0%
! TTCCCTTTTAAACGGCATCC+TGG - chr8_2:859088-859107 None:intergenic 45.0%
AGTGTACCATCTCCACTACA+CGG - chr8_2:859178-859197 None:intergenic 45.0%
TGGAGATGGTACACTTCGTA+AGG + chr8_2:859183-859202 Msa1226470:CDS 45.0%
! TTCGTAAGGCACCTGATATG+TGG + chr8_2:859197-859216 Msa1226470:CDS 45.0%
TACCATTTCCGCCACATATC+AGG - chr8_2:859211-859230 None:intergenic 45.0%
TTTCTGCAGGAATTCAGGGA+TGG + chr8_2:859296-859315 Msa1226470:intron 45.0%
TTCTGCAGGAATTCAGGGAT+GGG + chr8_2:859297-859316 Msa1226470:intron 45.0%
GCAAATCTTTCTCGAGGTTG+GGG + chr8_2:859593-859612 Msa1226470:intron 45.0%
CAAATCTTTCTCGAGGTTGG+GGG + chr8_2:859594-859613 Msa1226470:intron 45.0%
AGTTATCTGGCATGGCGAAT+TGG + chr8_2:859785-859804 Msa1226470:intron 45.0%
ACTCAAAATCGGGGGAAGAA+TGG + chr8_2:860261-860280 Msa1226470:CDS 45.0%
AAATGAAGCTGTGGTTGCAG+AGG + chr8_2:860315-860334 Msa1226470:CDS 45.0%
CGTGCTTCGAAGGTAATTAG+CGG - chr8_2:860431-860450 None:intergenic 45.0%
CGCTAATTACCTTCGAAGCA+CGG + chr8_2:860429-860448 Msa1226470:intron 45.0%
! CCCCTCTTTTACTGTTTTGC+AGG + chr8_2:860612-860631 Msa1226470:intron 45.0%
ACCTTCCATTTCTTGAGACC+TGG - chr8_2:860709-860728 None:intergenic 45.0%
!!! TAGTGGATTCCTGGGTTTTC+TGG + chr8_2:860851-860870 Msa1226470:intron 45.0%
! TCAGAAGAGGCATAACTACC+AGG - chr8_2:861024-861043 None:intergenic 45.0%
ACGGAACTTGGGAACATCTT+TGG - chr8_2:861406-861425 None:intergenic 45.0%
TCCTTCTGGCAAATGCTATC+AGG + chr8_2:861452-861471 Msa1226470:CDS 45.0%
TCCTGATAGCATTTGCCAGA+AGG - chr8_2:861456-861475 None:intergenic 45.0%
GGCAAATGCTATCAGGATCT+TGG + chr8_2:861459-861478 Msa1226470:CDS 45.0%
AGCACTAGAGAATCCTGTGA+TGG + chr8_2:861557-861576 Msa1226470:CDS 45.0%
ACTAGAGAATCCTGTGATGG+AGG + chr8_2:861560-861579 Msa1226470:CDS 45.0%
!! TTCCTCTAGAGCATTGCATG+AGG + chr8_2:861607-861626 Msa1226470:CDS 45.0%
ATCCTCATGCAATGCTCTAG+AGG - chr8_2:861612-861631 None:intergenic 45.0%
ATGCCTCATGATCAGAACAC+TGG + chr8_2:861633-861652 Msa1226470:CDS 45.0%
TTGCAGCACAGCAATGAAGA+AGG - chr8_2:861661-861680 None:intergenic 45.0%
CAAAAAGTTTCTCCTCTGCC+AGG + chr8_2:861678-861697 Msa1226470:CDS 45.0%
TTCCGTTCTTGCAGCTATTC+TGG + chr8_2:861841-861860 Msa1226470:intron 45.0%
ACCTAGCAAACAGAGTCTTG+AGG + chr8_2:861868-861887 Msa1226470:CDS 45.0%
TCCTCAAGACTCTGTTTGCT+AGG - chr8_2:861872-861891 None:intergenic 45.0%
GTCCTCTAACACGTGAAGAA+CGG + chr8_2:862002-862021 Msa1226470:CDS 45.0%
TTCCGTTCTTCACGTGTTAG+AGG - chr8_2:862007-862026 None:intergenic 45.0%
ACGTGAAGAACGGAATTCTG+AGG + chr8_2:862012-862031 Msa1226470:CDS 45.0%
TGCACAAAACACAGCAGAGA+AGG + chr8_2:862054-862073 Msa1226470:CDS 45.0%
CAATATCAGGGCAAATGGAG+AGG + chr8_2:862097-862116 Msa1226470:CDS 45.0%
CTATGTCTCCAAGTCAGTCA+AGG + chr8_2:862258-862277 Msa1226470:CDS 45.0%
CAACTGAAAATGACCTCGGT+TGG + chr8_2:862313-862332 Msa1226470:CDS 45.0%
AAACATCTTCATGCCAACCG+AGG - chr8_2:862329-862348 None:intergenic 45.0%
GAAAGACAAACAGCACGAGA+AGG + chr8_2:863045-863064 Msa1226470:CDS 45.0%
! GATGATATCCGGAAAGCACA+TGG - chr8_2:863081-863100 None:intergenic 45.0%
GCAATCCTTCGGATGATATC+CGG - chr8_2:863092-863111 None:intergenic 45.0%
AATTATACAGGCATCTCCCG+AGG + chr8_2:863140-863159 Msa1226470:CDS 45.0%
! GATTTTGCTGATGCCGAGTT+TGG + chr8_2:863204-863223 Msa1226470:CDS 45.0%
! TGATGCCGAGTTTGGTGAAA+AGG + chr8_2:863212-863231 Msa1226470:CDS 45.0%
! TGCTGCCTTTTCACCAAACT+CGG - chr8_2:863220-863239 None:intergenic 45.0%
AAGGCAGCAAACTTATTGCC+TGG + chr8_2:863231-863250 Msa1226470:CDS 45.0%
! CGGCATTTTCCTTTTCTGCA+GGG + chr8_2:863351-863370 Msa1226470:intron 45.0%
CAACAATAGCAATCGGATGC+TGG + chr8_2:863411-863430 Msa1226470:CDS 45.0%
AATAGCAATCGGATGCTGGA+GGG + chr8_2:863415-863434 Msa1226470:CDS 45.0%
GCACAGAAAATGGCTCTTCT+GGG + chr8_2:863513-863532 Msa1226470:CDS 45.0%
AAAGCTGCTGTGAGTTAGAG+AGG + chr8_2:863617-863636 Msa1226470:exon 45.0%
AAGCTGCTGTGAGTTAGAGA+GGG + chr8_2:863618-863637 Msa1226470:exon 45.0%
TACTTAGAACCAGGGAGTCA+GGG - chr8_2:863782-863801 None:intergenic 45.0%
! AACCTCGTCGTTAGTTTCGA+AGG + chr8_2:863953-863972 Msa1226470:three_prime_UTR 45.0%
!!! AATATTTTACATATATTTTA+GGG + chr8_2:859371-859390 Msa1226470:intron 5.0%
GATAAGGAAGGGTCTGGATC+TGG - chr8_2:856521-856540 None:intergenic 50.0%
GAATGCCAAGCAAAGTTCCC+GGG - chr8_2:857002-857021 None:intergenic 50.0%
CTCCGAGAAGCGAAAAAAGC+AGG - chr8_2:857148-857167 None:intergenic 50.0%
TGGGAACGGAGTTGACAAGT+TGG + chr8_2:857513-857532 Msa1226470:intron 50.0%
ACAATGCACGTGCATGAGGA+TGG - chr8_2:857711-857730 None:intergenic 50.0%
CTGAATGGTTCAGTACCCGT+AGG + chr8_2:858291-858310 Msa1226470:intron 50.0%
TGCACATCCAAGAATAGGGG+AGG - chr8_2:858591-858610 None:intergenic 50.0%
!! GTTTTAGTGTGTGCTGCACC+AGG + chr8_2:858742-858761 Msa1226470:intron 50.0%
!! AGGCAGTGATCCTGCTTTTG+TGG - chr8_2:858806-858825 None:intergenic 50.0%
AAAGCAGGATCACTGCCTGA+TGG + chr8_2:858808-858827 Msa1226470:CDS 50.0%
AGGATCACTGCCTGATGGAA+TGG + chr8_2:858813-858832 Msa1226470:CDS 50.0%
GTGTACCATCTCCACTACAC+GGG - chr8_2:859177-859196 None:intergenic 50.0%
! GTAAGGCACCTGATATGTGG+CGG + chr8_2:859200-859219 Msa1226470:CDS 50.0%
! CACCTGATATGTGGCGGAAA+TGG + chr8_2:859206-859225 Msa1226470:CDS 50.0%
AGGAATTCAGGGATGGGACA+AGG + chr8_2:859303-859322 Msa1226470:intron 50.0%
GGAATTCAGGGATGGGACAA+GGG + chr8_2:859304-859323 Msa1226470:intron 50.0%
AGGGGAGGCTATCATTCCAA+GGG - chr8_2:859636-859655 None:intergenic 50.0%
TTGAGCCTCAAGGAGTAGAG+TGG + chr8_2:860047-860066 Msa1226470:intron 50.0%
AGTCAAGCCTGCAACTAGCA+GGG - chr8_2:860375-860394 None:intergenic 50.0%
! CTGTTTTGCAGGTTTTGCGG+AGG + chr8_2:860623-860642 Msa1226470:intron 50.0%
GCCAGGTCTCAAGAAATGGA+AGG + chr8_2:860705-860724 Msa1226470:CDS 50.0%
GCATGTAACTTCGCACCTGT+TGG + chr8_2:861235-861254 Msa1226470:intron 50.0%
GCTCCAGTGTTCTGATCATG+AGG - chr8_2:861639-861658 None:intergenic 50.0%
CATATGAGACTACCTGGCAG+AGG - chr8_2:861693-861712 None:intergenic 50.0%
TGTGTGTGAGAGAGAGAGAG+AGG - chr8_2:861725-861744 None:intergenic 50.0%
AGTCGTCAAAGCAGTTCCAG+AGG + chr8_2:861934-861953 Msa1226470:CDS 50.0%
AACACAGCAGAGAAGGTTCC+AGG + chr8_2:862061-862080 Msa1226470:CDS 50.0%
GTTGCGTTGAACTTCTCGGT+TGG + chr8_2:862286-862305 Msa1226470:CDS 50.0%
AGACAAACAGCACGAGAAGG+TGG + chr8_2:863048-863067 Msa1226470:CDS 50.0%
GCTCTTCACCATGTGCTTTC+CGG + chr8_2:863070-863089 Msa1226470:CDS 50.0%
GCTTTCCGGATATCATCCGA+AGG + chr8_2:863084-863103 Msa1226470:CDS 50.0%
AGAAGACGCTTGAAGTCCTC+GGG - chr8_2:863159-863178 None:intergenic 50.0%
CAGAAGACGCTTGAAGTCCT+CGG - chr8_2:863160-863179 None:intergenic 50.0%
CTTATTGCCTGGTTGTTGCG+TGG + chr8_2:863242-863261 Msa1226470:CDS 50.0%
! GCGGCATTTTCCTTTTCTGC+AGG + chr8_2:863350-863369 Msa1226470:intron 50.0%
CAATAGCAATCGGATGCTGG+AGG + chr8_2:863414-863433 Msa1226470:CDS 50.0%
ATAGCAATCGGATGCTGGAG+GGG + chr8_2:863416-863435 Msa1226470:CDS 50.0%
GTCCATTGCAGAGACCATCA+CGG - chr8_2:863456-863475 None:intergenic 50.0%
GGCACAGAAAATGGCTCTTC+TGG + chr8_2:863512-863531 Msa1226470:CDS 50.0%
AGAAAATGGCTCTTCTGGGC+AGG + chr8_2:863517-863536 Msa1226470:CDS 50.0%
CTATGTTGGAGGTGAAGCAC+AGG + chr8_2:863556-863575 Msa1226470:CDS 50.0%
GTACTTAGAACCAGGGAGTC+AGG - chr8_2:863783-863802 None:intergenic 50.0%
TGCCTTCGAAACTAACGACG+AGG - chr8_2:863958-863977 None:intergenic 50.0%
! GATGCAGTTGTGGCGCGTTT+TGG - chr8_2:856406-856425 None:intergenic 55.0%
ACCAGAGCAACCATGGGTAG+AGG + chr8_2:856431-856450 Msa1226470:exon 55.0%
TCCTCTACCCATGGTTGCTC+TGG - chr8_2:856435-856454 None:intergenic 55.0%
GAGCAACCATGGGTAGAGGA+AGG + chr8_2:856435-856454 Msa1226470:exon 55.0%
TCGTGACCTTCCTCTACCCA+TGG - chr8_2:856444-856463 None:intergenic 55.0%
TCGGAGGATAAGGAAGGGTC+TGG - chr8_2:856527-856546 None:intergenic 55.0%
TGCTGAAGGAGGTGAGACAG+AGG + chr8_2:856953-856972 Msa1226470:CDS 55.0%
GAGGTGAGACAGAGGCGATT+CGG + chr8_2:856961-856980 Msa1226470:CDS 55.0%
GCAAAGTTCCCGGGATACCA+GGG - chr8_2:856993-857012 None:intergenic 55.0%
AGCAAAGTTCCCGGGATACC+AGG - chr8_2:856994-857013 None:intergenic 55.0%
GGTATCCCGGGAACTTTGCT+TGG + chr8_2:856994-857013 Msa1226470:CDS 55.0%
! GATGTCCCGTGTAGTGGAGA+TGG + chr8_2:859169-859188 Msa1226470:CDS 55.0%
TTTGTATCCCCTGCGAGCAG+AGG - chr8_2:859565-859584 None:intergenic 55.0%
GAGGGGAGGCTATCATTCCA+AGG - chr8_2:859637-859656 None:intergenic 55.0%
AGCTGCCACTCTACTCCTTG+AGG - chr8_2:860055-860074 None:intergenic 55.0%
TGTGAAGCCCTGCTAGTTGC+AGG + chr8_2:860365-860384 Msa1226470:intron 55.0%
GAGTCAAGCCTGCAACTAGC+AGG - chr8_2:860376-860395 None:intergenic 55.0%
! TTGCAGGTTTTGCGGAGGTG+TGG + chr8_2:860628-860647 Msa1226470:intron 55.0%
CCTGGCCGACGAATAAGTTG+TGG - chr8_2:860691-860710 None:intergenic 55.0%
CCACAACTTATTCGTCGGCC+AGG + chr8_2:860688-860707 Msa1226470:CDS 55.0%
GTCGGCCAGGTCTCAAGAAA+TGG + chr8_2:860701-860720 Msa1226470:CDS 55.0%
GGGTAAAATACCCTGGAGCC+TGG + chr8_2:861003-861022 Msa1226470:intron 55.0%
GGCATAACTACCAGGCTCCA+GGG - chr8_2:861016-861035 None:intergenic 55.0%
AGGCATAACTACCAGGCTCC+AGG - chr8_2:861017-861036 None:intergenic 55.0%
TCAGCAGACTCCTCCATCAC+AGG - chr8_2:861573-861592 None:intergenic 55.0%
! TGTGATGGAGGAGTCTGCTG+AGG + chr8_2:861572-861591 Msa1226470:CDS 55.0%
GGACTTCAAGCGTCTTCTGC+AGG + chr8_2:863161-863180 Msa1226470:CDS 55.0%
AATCGGATGCTGGAGGGGTA+GGG + chr8_2:863421-863440 Msa1226470:CDS 55.0%
GTCCGTGATGGTCTCTGCAA+TGG + chr8_2:863451-863470 Msa1226470:CDS 55.0%
AAATGGCTCTTCTGGGCAGG+TGG + chr8_2:863520-863539 Msa1226470:CDS 55.0%
AGGTGAAGCACAGGCTGTAC+AGG + chr8_2:863565-863584 Msa1226470:CDS 55.0%
CGTGCATTCACTTCGCGCTG+AGG + chr8_2:856841-856860 Msa1226470:CDS 60.0%
TTCCCGGGATACCAGGGCAA+AGG - chr8_2:856987-857006 None:intergenic 60.0%
CTGTGCGATGTCCCGTGTAG+TGG + chr8_2:859163-859182 Msa1226470:CDS 60.0%
CAATCGGATGCTGGAGGGGT+AGG + chr8_2:863420-863439 Msa1226470:CDS 60.0%
TAGGGCGAGGTTGTCCGTGA+TGG + chr8_2:863439-863458 Msa1226470:CDS 60.0%
TGAGACAGTCCCTGACTCCC+TGG + chr8_2:863770-863789 Msa1226470:three_prime_UTR 60.0%
! AGGCGATTCGGCCTTTGCCC+TGG + chr8_2:856973-856992 Msa1226470:CDS 65.0%
CGGCCTTTGCCCTGGTATCC+CGG + chr8_2:856981-857000 Msa1226470:CDS 65.0%
GGCCTTTGCCCTGGTATCCC+GGG + chr8_2:856982-857001 Msa1226470:CDS 65.0%
TCCTGGCGTCCTCTGCTCGC+AGG + chr8_2:859553-859572 Msa1226470:intron 70.0%
CCTGGCGTCCTCTGCTCGCA+GGG + chr8_2:859554-859573 Msa1226470:intron 70.0%
CTGGCGTCCTCTGCTCGCAG+GGG + chr8_2:859555-859574 Msa1226470:intron 70.0%
GATGCTGGAGGGGTAGGGCG+AGG + chr8_2:863426-863445 Msa1226470:CDS 70.0%
CCCTGCGAGCAGAGGACGCC+AGG - chr8_2:859557-859576 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 856397 864007 856397 ID=Msa1226470;Name=Msa1226470
chr8_2 mRNA 856397 864007 856397 ID=Msa1226470-mRNA-1;Parent=Msa1226470;Name=Msa1226470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=46|1|1|1|1|1|14|373|817
chr8_2 exon 856397 856705 856397 ID=Msa1226470-mRNA-1:exon:141;Parent=Msa1226470-mRNA-1
chr8_2 exon 856796 856862 856796 ID=Msa1226470-mRNA-1:exon:142;Parent=Msa1226470-mRNA-1
chr8_2 exon 856951 857066 856951 ID=Msa1226470-mRNA-1:exon:143;Parent=Msa1226470-mRNA-1
chr8_2 exon 858154 858220 858154 ID=Msa1226470-mRNA-1:exon:144;Parent=Msa1226470-mRNA-1
chr8_2 exon 858585 858633 858585 ID=Msa1226470-mRNA-1:exon:145;Parent=Msa1226470-mRNA-1
chr8_2 exon 858749 858834 858749 ID=Msa1226470-mRNA-1:exon:146;Parent=Msa1226470-mRNA-1
chr8_2 exon 858977 859227 858977 ID=Msa1226470-mRNA-1:exon:147;Parent=Msa1226470-mRNA-1
chr8_2 exon 859305 859360 859305 ID=Msa1226470-mRNA-1:exon:148;Parent=Msa1226470-mRNA-1
chr8_2 exon 860251 860336 860251 ID=Msa1226470-mRNA-1:exon:149;Parent=Msa1226470-mRNA-1
chr8_2 exon 860634 860726 860634 ID=Msa1226470-mRNA-1:exon:150;Parent=Msa1226470-mRNA-1
chr8_2 exon 861372 861699 861372 ID=Msa1226470-mRNA-1:exon:151;Parent=Msa1226470-mRNA-1
chr8_2 exon 861855 862348 861855 ID=Msa1226470-mRNA-1:exon:152;Parent=Msa1226470-mRNA-1
chr8_2 exon 863045 863279 863045 ID=Msa1226470-mRNA-1:exon:153;Parent=Msa1226470-mRNA-1
chr8_2 exon 863372 864007 863372 ID=Msa1226470-mRNA-1:exon:154;Parent=Msa1226470-mRNA-1
chr8_2 five_prime_UTR 856397 856442 856397 ID=Msa1226470-mRNA-1:five_prime_utr;Parent=Msa1226470-mRNA-1
chr8_2 CDS 856443 856705 856443 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 856796 856862 856796 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 856951 857066 856951 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 858154 858220 858154 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 858585 858633 858585 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 858749 858834 858749 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 858977 859227 858977 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 859305 859360 859305 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 860251 860336 860251 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 860634 860726 860634 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 861372 861699 861372 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 861855 862348 861855 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 863045 863279 863045 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 CDS 863372 863634 863372 ID=Msa1226470-mRNA-1:cds;Parent=Msa1226470-mRNA-1
chr8_2 three_prime_UTR 863635 864007 863635 ID=Msa1226470-mRNA-1:three_prime_utr;Parent=Msa1226470-mRNA-1
Gene Sequence

>Msa1226470

ATGGGTAGAGGAAGGTCACGAACTCAAAGAAAGGACTTTCGTCAAAACAGAGAAAACGTTTGGAAGCGTTCGAAACCAGATCCAGACCCTTCCTTATCCTCCGAAAATTCTCAAACTACTACTCATTGGACTCCTTTCTTGACTCAAAACCCTTCCTTTGATTCTTATTACAAGGAACAGTTAATTGTTGATCCACAAGAATGGGATCAATTCATCGCAGTTCTCCGAACACCATTGCCTGCATCATTTAGAATCAATTCTAGTAGTCAATTTGCTGATGATATTCGTTCCCAATTGGAAAATGATTTCGTGCATTCACTTCGCGCTGAGGTTGCTGAAGGAGGTGAGACAGAGGCGATTCGGCCTTTGCCCTGGTATCCCGGGAACTTTGCTTGGCATTCAAATTTTTCGCGGATGCAGCTTAGGAAGAATCAAACATTGGAGAGGTTCCACGAATTTTTAAAGCTAGAAAATGAAATTGGAAATATCACAAGACAGGAAGCTGTTAGTATGGTTCCTCCCCTATTCTTGGATGTGCATTCAGACCATTTTGTACTTGACATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTCGAGACTATACACCAATCCACAAAAGCAGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTTGATGTTAAAAGATGTAATCTTCTCATCCATCAAACAAAAAGAATGTCCACAGCCAACCTAATTGTTACTAATCATGAAGCACAACATTTCCCAGGATGCCGTTTAAAAGGGAATTATGAAAGAATGGAGTTAGATCACAATATTCACCAACTGTTATTTGATCGTGTTCTGTGCGATGTCCCGTGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATATGTGGCGGAAATGGAATTCAGGGATGGGACAAGGGCTTCACAGCCTACAAGTTTTAATTGCTATGCGAGGTTTATCTTTACTCAAAATCGGGGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAAAATGAAGCTGTGGTTGCAGAGGTTTTGCGGAGGTGTGGTGAGTCTGTCAAACTTGTTGACGTGTCTAGTGAGCTTCCACAACTTATTCGTCGGCCAGGTCTCAAGAAATGGAAGGTATATGACAAGAGCAGTTGGTTTGTCTCTTCCAAAGATGTTCCCAAGTTCCGTAGAAGTGTGATTCTTTCCAGTATGTTTCCTTCTGGCAAATGCTATCAGGATCTTGGCGATAGTAATTGTAATGTTGACATGGAAGATGACATTACTAGTGTGGAAAATGAAAAAACTGAAGATGGTATTGAAGCACTAGAGAATCCTGTGATGGAGGAGTCTGCTGAGGAAGTTTCAGATTTTCCTCTAGAGCATTGCATGAGGATAATGCCTCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTGCTGCAAAAAGTTTCTCCTCTGCCAGCTATTCTGGAAAAACCTAGCAAACAGAGTCTTGAGGATGCACAAGCACCGCACATGAATTCATCTGAAACTACACTTGAAGTCGTCAAAGCAGTTCCAGAGGAAAATGTGAATGATAATGTATCCCATACAGATGATTTGGAAGATAGTCCTCTAACACGTGAAGAACGGAATTCTGAGGAAACTGAAGAACCGCATAATGCACAAAACACAGCAGAGAAGGTTCCAGGTAAAAGAAAGCTACAATATCAGGGCAAATGGAGAGGTGTTGACCCTGTTGTCTTTTTTAAAGATGAAGCAATTGTTAACAGTATAAAGAATTTTTATGGAATCGATGAGCGTTTTCCATTTGATGGTCACCTTGTTACACGAAACATTGATAACAGTAATGCAAAAAGAATTTACTATGTCTCCAAGTCAGTCAAGGATATTGTTGCGTTGAACTTCTCGGTTGGTCAGCAACTGAAAATGACCTCGGTTGGCATGAAGATGTTTGAAAGACAAACAGCACGAGAAGGTGGCTCTTCACCATGTGCTTTCCGGATATCATCCGAAGGATTGCCCCTTATTCTTCCATACATAACCAAGCAAATTATACAGGCATCTCCCGAGGACTTCAAGCGTCTTCTGCAGGACAAAGATGTAAAATATTCAGATTTTGCTGATGCCGAGTTTGGTGAAAAGGCAGCAAACTTATTGCCTGGTTGTTGCGTGGTTATTATGGGTAAAGGGAATACAGTTGCAACAGAATCCCTCAAAGTTGACGAGTCAACAATAGCAATCGGATGCTGGAGGGGTAGGGCGAGGTTGTCCGTGATGGTCTCTGCAATGGACTGCCAAGAATTGCTTGCAAGACTTTTAATACGTCTAGGCACAGAAAATGGCTCTTCTGGGCAGGTGGACAATTCCTCTAACTATGTTGGAGGTGAAGCACAGGCTGTACAGGAGTTGAACGATAAAAGTGATAATGATTTGAAAGCTGCTGTGAGTTAG
Protein sequence

>Msa1226470

MGRGRSRTQRKDFRQNRENVWKRSKPDPDPSLSSENSQTTTHWTPFLTQNPSFDSYYKEQLIVDPQEWDQFIAVLRTPLPASFRINSSSQFADDIRSQLENDFVHSLRAEVAEGGETEAIRPLPWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLETIHQSTKAGSLPDGMVVANDLDVKRCNLLIHQTKRMSTANLIVTNHEAQHFPGCRLKGNYERMELDHNIHQLLFDRVLCDVPCSGDGTLRKAPDMWRKWNSGMGQGLHSLQVLIAMRGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGESVKLVDVSSELPQLIRRPGLKKWKVYDKSSWFVSSKDVPKFRRSVILSSMFPSGKCYQDLGDSNCNVDMEDDITSVENEKTEDGIEALENPVMEESAEEVSDFPLEHCMRIMPHDQNTGAFFIAVLQKVSPLPAILEKPSKQSLEDAQAPHMNSSETTLEVVKAVPEENVNDNVSHTDDLEDSPLTREERNSEETEEPHNAQNTAEKVPGKRKLQYQGKWRGVDPVVFFKDEAIVNSIKNFYGIDERFPFDGHLVTRNIDNSNAKRIYYVSKSVKDIVALNFSVGQQLKMTSVGMKMFERQTAREGGSSPCAFRISSEGLPLILPYITKQIIQASPEDFKRLLQDKDVKYSDFADAEFGEKAANLLPGCCVVIMGKGNTVATESLKVDESTIAIGCWRGRARLSVMVSAMDCQELLARLLIRLGTENGSSGQVDNSSNYVGGEAQAVQELNDKSDNDLKAAVS*