AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0275890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0275890 MtrunA17_Chr2g0288251 99.501 401 2 0 1 401 1 401 0.0 822
Msa0275890 MtrunA17_Chr4g0074711 78.649 370 61 12 41 401 51 411 0.0 552
Msa0275890 MtrunA17_Chr3g0133651 57.143 336 138 4 54 389 87 416 1.29e-127 374
Msa0275890 MtrunA17_Chr2g0328791 55.080 374 123 6 51 393 6 365 2.15e-127 374
Msa0275890 MtrunA17_Chr1g0153871 52.195 410 168 9 9 393 27 433 3.91e-127 373
Msa0275890 MtrunA17_Chr4g0045221 59.211 304 105 4 57 342 113 415 1.48e-124 367
Msa0275890 MtrunA17_Chr3g0139111 32.803 314 179 8 49 343 51 351 1.64e-41 151
Msa0275890 MtrunA17_Chr3g0139111 22.907 227 148 4 150 370 55 260 2.37e-12 68.2
Msa0275890 MtrunA17_Chr4g0070231 30.769 351 201 11 18 343 3 336 4.74e-38 141
Msa0275890 MtrunA17_Chr8g0344491 30.275 327 193 11 28 335 35 345 1.50e-33 129
Msa0275890 MtrunA17_Chr4g0044541 29.658 263 158 8 61 318 35 275 9.36e-29 118
Msa0275890 MtrunA17_Chr4g0044541 26.056 284 198 8 62 340 124 400 1.66e-26 111
Msa0275890 MtrunA17_Chr1g0153181 28.897 263 160 9 61 318 33 273 1.29e-25 108
Msa0275890 MtrunA17_Chr1g0153181 25.564 266 185 9 62 321 122 380 4.42e-20 92.4
Msa0275890 MtrunA17_Chr7g0265341 24.068 295 191 7 49 338 65 331 6.97e-25 107
Msa0275890 MtrunA17_Chr7g0265341 25.352 284 194 8 62 337 160 433 2.22e-19 90.5
Msa0275890 MtrunA17_Chr3g0134141 28.517 263 161 8 61 318 25 265 4.41e-24 104
Msa0275890 MtrunA17_Chr3g0134141 26.277 274 178 8 62 324 114 374 1.70e-20 93.6
Msa0275890 MtrunA17_Chr3g0134141 29.545 176 101 5 156 326 25 182 2.67e-13 71.6
Msa0275890 MtrunA17_Chr1g0179701 24.510 306 199 7 24 324 31 309 7.83e-24 103
Msa0275890 MtrunA17_Chr1g0179701 24.013 304 210 9 40 338 135 422 8.79e-15 76.3
Msa0275890 MtrunA17_Chr1g0201151 28.417 278 171 10 61 333 31 285 4.68e-22 98.6
Msa0275890 MtrunA17_Chr1g0201151 21.914 324 225 10 24 340 95 397 1.92e-16 81.3
Msa0275890 MtrunA17_Chr6g0465751 26.217 267 166 8 58 319 23 263 1.17e-21 97.1
Msa0275890 MtrunA17_Chr6g0465751 22.772 303 215 6 62 357 115 405 3.18e-19 89.7
Msa0275890 MtrunA17_Chr6g0466501 26.592 267 165 9 58 319 23 263 5.90e-21 95.1
Msa0275890 MtrunA17_Chr6g0466501 23.077 364 236 10 62 397 115 462 2.11e-18 87.4
Msa0275890 MtrunA17_Chr1g0177101 30.348 201 128 6 52 244 100 296 1.04e-20 92.0
Msa0275890 MtrunA17_Chr3g0116631 31.285 179 114 4 62 235 111 285 2.47e-19 87.4
Msa0275890 MtrunA17_Chr3g0116631 27.230 213 126 6 135 329 79 280 3.74e-12 66.6
Msa0275890 MtrunA17_Chr0c09g0493511 23.934 305 209 10 62 357 33 323 7.01e-19 88.6
Msa0275890 MtrunA17_Chr6g0465691 23.099 342 229 9 62 385 33 358 1.56e-18 87.4
Msa0275890 MtrunA17_Chr7g0267571 27.451 204 128 7 51 243 100 294 2.81e-16 79.3
Msa0275890 MtrunA17_Chr3g0110211 27.957 186 126 3 51 236 16 193 4.79e-16 79.0
Msa0275890 MtrunA17_Chr3g0110211 25.946 185 111 5 154 331 24 189 1.55e-12 68.6
Msa0275890 MtrunA17_Chr4g0058151 28.495 186 107 4 62 235 124 295 5.05e-16 78.2
Msa0275890 MtrunA17_Chr4g0058151 27.513 189 119 5 146 328 113 289 1.35e-12 68.2
Msa0275890 MtrunA17_Chr1g0181111 29.688 192 115 4 62 235 86 275 5.44e-16 77.8
Msa0275890 MtrunA17_Chr1g0181111 30.052 193 115 6 153 329 82 270 1.14e-13 70.9
Msa0275890 MtrunA17_Chr6g0465631 20.629 286 211 8 62 340 17 293 2.07e-15 77.8
Msa0275890 MtrunA17_Chr6g0466451 20.132 303 226 8 62 357 17 310 2.24e-15 77.8
Msa0275890 MtrunA17_Chr3g0096561 26.087 253 142 9 153 390 196 418 3.95e-14 74.3
Msa0275890 MtrunA17_Chr3g0131631 25.962 208 124 6 141 347 263 441 1.26e-13 72.8
Msa0275890 MtrunA17_Chr7g0266451 21.053 285 187 8 62 339 103 356 1.83e-13 71.6
Msa0275890 MtrunA17_Chr8g0372111 22.297 296 193 8 62 347 420 688 2.68e-13 72.0
Msa0275890 MtrunA17_Chr7g0276201 21.528 288 184 10 62 338 106 362 2.83e-13 71.2
Msa0275890 MtrunA17_Chr8g0335981 23.420 269 172 10 62 322 217 459 2.79e-12 68.6
Msa0275890 MtrunA17_Chr7g0217261 23.226 310 184 10 83 370 372 649 3.17e-12 68.2
Msa0275890 MtrunA17_Chr2g0304041 25.967 181 112 5 153 332 194 353 3.85e-12 68.2
Msa0275890 MtrunA17_Chr1g0190211 39.474 76 45 1 154 229 131 205 1.25e-11 64.3
Msa0275890 MtrunA17_Chr1g0212611 27.136 199 137 5 57 253 217 409 2.46e-11 65.1
Msa0275890 MtrunA17_Chr8g0375101 25.338 296 170 10 58 314 2 285 5.00e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0275890 AT1G11650.2 65.205 342 103 6 38 377 39 366 2.30e-156 447
Msa0275890 AT5G54900.1 64.759 332 102 7 51 378 51 371 9.40e-145 417
Msa0275890 AT4G27000.1 64.205 352 106 5 38 376 45 389 3.24e-144 416
Msa0275890 AT1G11650.1 67.159 271 84 3 38 306 39 306 1.85e-132 382
Msa0275890 AT3G19130.1 58.710 310 110 5 55 348 103 410 8.87e-122 360
Msa0275890 AT1G49600.1 55.132 341 127 6 50 379 109 434 1.17e-120 357
Msa0275890 AT1G49600.3 58.140 301 116 3 50 342 109 407 6.53e-119 353
Msa0275890 AT1G49600.2 58.140 301 116 3 50 342 109 407 6.53e-119 353
Msa0275890 AT1G47490.1 50.758 396 177 8 4 394 48 430 1.02e-117 349
Msa0275890 AT5G19350.2 53.279 366 135 8 48 393 8 357 1.79e-117 348
Msa0275890 AT5G19350.1 52.128 376 137 8 48 399 8 364 7.83e-117 347
Msa0275890 AT1G47500.1 53.782 357 146 8 45 394 88 432 2.32e-115 343
Msa0275890 AT1G47490.2 50.746 268 119 6 4 265 48 308 5.62e-77 241
Msa0275890 AT1G47490.2 25.758 198 124 5 141 328 87 271 1.47e-12 68.6
Msa0275890 AT1G47500.2 54.867 226 92 5 45 264 88 309 1.85e-73 232
Msa0275890 AT1G47500.2 26.786 224 138 7 141 354 89 296 5.48e-12 66.6
Msa0275890 AT1G54080.1 32.432 333 190 11 22 335 30 346 5.64e-40 147
Msa0275890 AT1G54080.2 32.047 337 190 12 22 335 30 350 3.35e-38 143
Msa0275890 AT1G17370.2 30.556 324 193 10 28 335 27 334 2.97e-35 134
Msa0275890 AT3G14100.1 30.887 327 191 11 28 335 32 342 1.02e-34 133
Msa0275890 AT1G17370.1 30.275 327 193 11 28 335 27 337 2.53e-34 132
Msa0275890 AT4G34110.1 27.018 285 181 7 61 340 37 299 9.80e-28 115
Msa0275890 AT4G34110.1 25.704 284 199 8 62 340 126 402 5.19e-25 107
Msa0275890 AT2G23350.1 27.875 287 195 8 59 340 133 412 1.92e-27 115
Msa0275890 AT2G23350.1 28.137 263 162 8 61 318 47 287 6.94e-24 104
Msa0275890 AT1G22760.1 28.446 341 202 13 7 340 8 313 1.47e-25 109
Msa0275890 AT1G22760.1 22.997 287 205 9 62 340 138 416 7.29e-19 89.4
Msa0275890 AT1G49760.1 26.667 285 182 7 61 340 46 308 7.38e-25 107
Msa0275890 AT1G49760.1 27.612 268 182 7 59 321 132 392 3.54e-22 99.4
Msa0275890 AT1G49760.1 27.228 202 121 6 51 235 213 405 7.47e-14 73.9
Msa0275890 AT1G49760.2 26.667 285 182 7 61 340 46 308 7.38e-25 107
Msa0275890 AT1G49760.2 27.612 268 182 7 59 321 132 392 3.54e-22 99.4
Msa0275890 AT1G49760.2 27.228 202 121 6 51 235 213 405 7.47e-14 73.9
Msa0275890 AT1G71770.1 26.316 285 184 8 61 340 60 323 4.50e-24 105
Msa0275890 AT1G71770.1 24.390 287 201 9 62 340 148 426 2.35e-21 96.7
Msa0275890 AT1G71770.2 26.316 285 184 8 61 340 60 323 4.50e-24 105
Msa0275890 AT1G71770.2 24.390 287 201 9 62 340 148 426 2.35e-21 96.7
Msa0275890 AT2G36660.1 26.224 286 180 10 61 341 25 284 1.11e-23 103
Msa0275890 AT2G36660.1 22.977 309 213 11 40 340 97 388 6.35e-14 73.9
Msa0275890 AT3G16380.1 27.491 291 187 10 62 341 114 391 2.55e-21 96.3
Msa0275890 AT3G16380.1 26.568 271 174 7 61 326 22 272 2.31e-19 90.5
Msa0275890 AT1G34140.1 24.101 278 195 8 62 333 33 300 4.50e-18 85.9
Msa0275890 AT3G52380.1 28.079 203 130 6 54 245 111 308 2.67e-17 82.8
Msa0275890 AT5G50250.1 31.053 190 118 5 48 235 108 286 9.20e-17 80.5
Msa0275890 AT4G24770.1 30.435 184 110 4 62 237 152 325 1.21e-16 80.9
Msa0275890 AT4G24770.1 26.289 194 125 4 141 328 136 317 2.67e-11 64.7
Msa0275890 AT4G24770.2 30.435 184 110 4 62 237 152 325 1.21e-16 80.9
Msa0275890 AT4G24770.2 26.289 194 125 4 141 328 136 317 2.67e-11 64.7
Msa0275890 AT2G37220.1 29.439 214 126 5 44 237 77 285 1.33e-14 74.3
Msa0275890 AT2G37220.1 28.947 190 120 5 154 329 90 278 9.79e-13 68.6
Msa0275890 AT2G18510.1 26.882 186 128 3 51 236 16 193 1.64e-14 74.7
Msa0275890 AT2G44710.2 24.908 273 163 11 62 322 216 458 1.12e-13 73.6
Msa0275890 AT2G44710.1 24.908 273 163 11 62 322 216 458 1.12e-13 73.6
Msa0275890 AT4G13850.4 41.772 79 45 1 157 235 37 114 1.13e-13 68.2
Msa0275890 AT2G44710.4 25.275 273 162 11 62 322 131 373 1.39e-13 73.2
Msa0275890 AT3G13224.3 28.643 199 135 4 59 257 9 200 1.83e-13 71.6
Msa0275890 AT3G13224.3 24.121 199 128 6 157 349 12 193 2.45e-11 65.1
Msa0275890 AT4G13850.3 43.373 83 45 2 157 239 37 117 1.91e-13 67.8
Msa0275890 AT4G13850.2 43.373 83 45 2 157 239 37 117 2.34e-13 67.8
Msa0275890 AT4G13850.1 43.373 83 45 2 157 239 37 117 2.62e-13 67.8
Msa0275890 AT4G14300.1 30.508 177 109 5 157 324 8 179 3.41e-13 71.2
Msa0275890 AT4G14300.2 30.508 177 109 5 157 324 8 179 3.41e-13 71.2
Msa0275890 AT1G60000.1 29.545 176 116 4 62 235 87 256 3.58e-13 69.7
Msa0275890 AT3G13224.2 28.571 196 133 4 62 257 21 209 7.90e-13 69.7
Msa0275890 AT3G13224.2 24.121 199 128 6 157 349 21 202 1.46e-11 65.9
Msa0275890 AT2G33410.1 31.613 155 96 2 62 207 8 161 3.29e-12 68.2
Msa0275890 AT2G42890.3 26.866 201 111 6 141 332 169 342 6.59e-12 67.8
Msa0275890 AT2G42890.2 26.866 201 111 6 141 332 169 342 6.59e-12 67.8
Msa0275890 AT2G42890.1 26.866 201 111 6 141 332 182 355 6.63e-12 67.8
Msa0275890 AT5G47620.1 28.477 151 102 3 62 207 8 157 6.73e-12 67.4
Msa0275890 AT5G47620.2 28.477 151 102 3 62 207 8 157 6.73e-12 67.4
Msa0275890 AT5G47620.5 28.477 151 102 3 62 207 8 157 6.73e-12 67.4
Msa0275890 AT5G40490.1 24.378 201 144 4 50 250 32 224 7.32e-12 67.0
Msa0275890 AT3G04500.1 39.474 76 45 1 154 229 136 210 7.87e-12 65.5
Msa0275890 AT4G00830.2 20.608 296 200 9 62 351 118 384 1.49e-11 66.2
Msa0275890 AT4G00830.1 20.608 296 200 9 62 351 118 384 1.49e-11 66.2
Msa0275890 AT4G00830.6 20.608 296 200 9 62 351 118 384 1.49e-11 66.2
Msa0275890 AT1G58470.2 25.683 183 112 6 151 314 2 179 1.99e-11 65.5
Msa0275890 AT1G58470.1 25.683 183 112 6 151 314 2 179 1.99e-11 65.5
Msa0275890 AT1G48920.1 26.230 183 113 5 46 210 281 459 3.68e-11 65.1
Msa0275890 AT3G52150.2 26.923 182 114 6 157 328 78 250 3.84e-11 63.5
Msa0275890 AT3G52150.1 26.923 182 114 6 157 328 78 250 3.84e-11 63.5
Msa0275890 AT4G00830.4 20.270 296 201 9 62 351 118 384 4.88e-11 64.7
Msa0275890 AT3G52660.3 19.932 296 194 7 62 345 94 358 6.97e-11 64.3
Msa0275890 AT3G52660.1 19.932 296 194 7 62 345 94 358 6.97e-11 64.3
Msa0275890 AT3G52660.2 19.932 296 194 7 62 345 94 358 6.97e-11 64.3
Msa0275890 AT2G16940.1 29.412 187 110 8 155 329 182 358 7.94e-11 64.3
Msa0275890 AT2G16940.5 29.412 187 110 8 155 329 41 217 8.77e-11 63.5
Msa0275890 AT2G16940.4 29.412 187 110 8 155 329 41 217 8.77e-11 63.5
Msa0275890 AT2G16940.2 29.412 187 110 8 155 329 231 407 9.22e-11 63.9

Find 161 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATTACCTGTCCGAAAAT+TGG 0.249363 2_3:-7999041 None:intergenic
AGTACGCACAGTTGTGTTAT+TGG 0.276538 2_3:-7998838 None:intergenic
TCATCAGCAAGCAAATTTAA+AGG 0.286109 2_3:-7999687 None:intergenic
CTGAGGAGGCTGAGCGGATT+GGG 0.307940 2_3:-7995316 None:intergenic
GTTGTGATTGATAGGCTTAC+TGG 0.319710 2_3:+7996692 Msa0275890:CDS
GACAAAATGTTCGCCTTTCA+TGG 0.326353 2_3:+7999207 Msa0275890:CDS
CATGTACTAGTTCACCATAT+TGG 0.331562 2_3:-7998984 None:intergenic
TTCGGCTGAGTGGTGGCAGC+CGG 0.333982 2_3:-7996842 None:intergenic
CAGGGTGGTTATGAGAATTA+TGG 0.335183 2_3:+7999405 Msa0275890:CDS
TAGGCTTACTGGTAGGTCTA+AGG 0.336332 2_3:+7996703 Msa0275890:CDS
GTCAGAATTACAGATTGAAT+TGG 0.341841 2_3:+7996522 Msa0275890:CDS
CTGACCACCATTCGGCATAA+TGG 0.348543 2_3:-7996504 None:intergenic
ACTGGTAGGTCTAAGGGATA+TGG 0.353776 2_3:+7996710 Msa0275890:CDS
TATATTACCTGTTTGTTTGA+AGG 0.362349 2_3:-7999239 None:intergenic
CGCTGCTCCTCCTGCTGGAC+AGG 0.368738 2_3:+7999431 Msa0275890:CDS
AGAGAGAGAAGTTTGTGTCT+TGG 0.370468 2_3:-7995103 None:intergenic
ATGTACTAGTTCACCATATT+GGG 0.373760 2_3:-7998983 None:intergenic
GCTGAGGAGGCTGAGCGGAT+TGG 0.376833 2_3:-7995317 None:intergenic
CAATGTTACTAGCAATCAAA+TGG 0.377030 2_3:-7999639 None:intergenic
TAAAGGGATACAAGAGCCTT+TGG 0.379996 2_3:-7999670 None:intergenic
AGATGATCGTCGGTGACATT+TGG 0.384630 2_3:-7998946 None:intergenic
CCTGCTGCTGGTGGATATTA+CGG 0.389047 2_3:+7999375 Msa0275890:CDS
CAATGTGTATGGAAGTTATC+CGG 0.390591 2_3:+7999458 Msa0275890:CDS
GTACGCACAGTTGTGTTATT+GGG 0.391359 2_3:-7998837 None:intergenic
ACAGCAGCAACAACAGCAAA+TGG 0.403314 2_3:+7999503 Msa0275890:CDS
GGGCGAAAGTTGTGATTGAT+AGG 0.409258 2_3:+7996684 Msa0275890:CDS
CATCAGCAAGCAAATTTAAA+GGG 0.415340 2_3:-7999686 None:intergenic
TCAGCGCTGGCGGGCTGCTG+AGG 0.435204 2_3:-7995333 None:intergenic
GTTGTTGCTGCTGTGGGTGT+TGG 0.436095 2_3:-7999494 None:intergenic
TTCCATCAGGCAAGCGATGC+GGG 0.436975 2_3:+7999013 Msa0275890:CDS
ACTAGTCAATCAGAAGGTTA+TGG 0.441162 2_3:+7996422 Msa0275890:CDS
TTCTCGCTTTGTCCGCCACT+AGG 0.442395 2_3:-7998810 None:intergenic
AATGTTACTAGCAATCAAAT+GGG 0.443839 2_3:-7999638 None:intergenic
GGTATTGTTGCGGTGGTTGT+TGG 0.444138 2_3:-7995227 None:intergenic
GGTTACGCTGCTCCTCCTGC+TGG 0.445011 2_3:+7999426 Msa0275890:CDS
GGAGGAGCCATGCCGTGTCC+TGG 0.452151 2_3:-7995195 None:intergenic
GGAAGTTATCCGGGGTATCC+TGG 0.454317 2_3:+7999468 Msa0275890:CDS
TCAGAATTACAGATTGAATT+GGG 0.455422 2_3:+7996523 Msa0275890:CDS
GATTGGGCCGCCCACATAGC+TGG 0.455583 2_3:-7995300 None:intergenic
CCGTAATATCCACCAGCAGC+AGG 0.455987 2_3:-7999375 None:intergenic
CTGATGAGGTCCGTACTCTC+TGG 0.456744 2_3:+7995352 Msa0275890:CDS
AATTATCTATATACCTGCTT+CGG 0.457585 2_3:+7995405 Msa0275890:CDS
ATTTGCTGTTGTTGCTGCTG+TGG 0.460723 2_3:-7999501 None:intergenic
TGCTGTGGGTGTTGGTAACC+AGG 0.462351 2_3:-7999486 None:intergenic
AACGAGCCCTAAAAGTCTCC+TGG 0.463019 2_3:-7996646 None:intergenic
CGGCATGGCTCCTCCCACCA+TGG 0.465301 2_3:+7995203 Msa0275890:CDS
TTTGCTGTTGTTGCTGCTGT+GGG 0.468115 2_3:-7999500 None:intergenic
TGGTGAGAGGTCGTCGAGGC+AGG 0.473256 2_3:+7996559 Msa0275890:CDS
CATTTGATTGCTAGTAACAT+TGG 0.473598 2_3:+7999640 Msa0275890:three_prime_UTR
GGATCGGTGATTTGCAGTAC+TGG 0.478598 2_3:+7995373 Msa0275890:CDS
GCGCTGGCGGGCTGCTGAGG+AGG 0.479390 2_3:-7995330 None:intergenic
ACGCACTCCTTCAAACAAAC+AGG 0.483228 2_3:+7999232 Msa0275890:CDS
TCGGCTGAGTGGTGGCAGCC+GGG 0.484975 2_3:-7996841 None:intergenic
CAGCAGCAGGGTAACCACCC+TGG 0.488709 2_3:-7999362 None:intergenic
TCAACAAGACCCATGAGGAT+TGG 0.489460 2_3:+7996800 Msa0275890:CDS
CTAGCAATCAAATGGGGAAG+AGG 0.493907 2_3:-7999631 None:intergenic
CAGGGTGGTTACCCTGCTGC+TGG 0.494399 2_3:+7999363 Msa0275890:CDS
TAGCAATCAAATGGGGAAGA+GGG 0.494794 2_3:-7999630 None:intergenic
ACAAAATGTTCGCCTTTCAT+GGG 0.496313 2_3:+7999208 Msa0275890:CDS
TGGATATTACGGCTATGCCC+AGG 0.498954 2_3:+7999386 Msa0275890:CDS
CTGTAATTCTGACCACCATT+CGG 0.501561 2_3:-7996512 None:intergenic
CACAACAACCGCCAGCTATG+TGG 0.504918 2_3:+7995289 Msa0275890:CDS
TTTGTGAGATTTGCTGATGA+GGG 0.506475 2_3:+7996734 Msa0275890:CDS
GGTGGTTGTTGGCCCATGGT+GGG 0.509060 2_3:-7995216 None:intergenic
TGTTACTGATTACCTTCTCC+AGG 0.509993 2_3:+7996628 Msa0275890:CDS
CATCAGGAGCTGTGCAGAAG+AGG 0.510016 2_3:+7999151 Msa0275890:intron
TCTCGCTTTGTCCGCCACTA+GGG 0.510759 2_3:-7998809 None:intergenic
GCAGCCCGCCAGCGCTGATG+AGG 0.511476 2_3:+7995338 Msa0275890:CDS
CCTGGTTGCATCATCTCTCT+CGG 0.516245 2_3:-7995177 None:intergenic
CCCTAAAAGTCTCCTGGAGA+AGG 0.518946 2_3:-7996640 None:intergenic
CTCGCCGGTGTTACCGAAGC+AGG 0.520914 2_3:-7995418 None:intergenic
GGATAACTTCCATACACATT+GGG 0.521577 2_3:-7999456 None:intergenic
AATGTGTATGGAAGTTATCC+GGG 0.521666 2_3:+7999459 Msa0275890:CDS
CGGATAACTTCCATACACAT+TGG 0.523263 2_3:-7999457 None:intergenic
GGACAGGATCCCAATGTGTA+TGG 0.524626 2_3:+7999447 Msa0275890:CDS
GCTGCTGTGGTGGTGGCTGT+TGG 0.525112 2_3:-7995248 None:intergenic
CGGTGGTTGTTGGCCCATGG+TGG 0.525587 2_3:-7995217 None:intergenic
GCTCGTTATAACTCTGTGAA+GGG 0.526741 2_3:+7996662 Msa0275890:CDS
TTGCGGTGGTTGTTGGCCCA+TGG 0.528216 2_3:-7995220 None:intergenic
GGTGGTTACCCTGCTGCTGG+TGG 0.530682 2_3:+7999366 Msa0275890:CDS
AATTGGGCAACTTTCAGTGC+TGG 0.533382 2_3:+7996539 Msa0275890:CDS
ACGTACGGCTGCTGTGGTGG+TGG 0.533909 2_3:-7995255 None:intergenic
AACCCGCATCGCTTGCCTGA+TGG 0.535712 2_3:-7999015 None:intergenic
AGCAATCAAATGGGGAAGAG+GGG 0.536247 2_3:-7999629 None:intergenic
CAGCAGCAACAACAGCAAAT+GGG 0.536514 2_3:+7999504 Msa0275890:CDS
AGGCTTACTGGTAGGTCTAA+GGG 0.537077 2_3:+7996704 Msa0275890:CDS
AGCAGCAGGGTAACCACCCT+GGG 0.537307 2_3:-7999361 None:intergenic
CACATAGCTGGCGGTTGTTG+TGG 0.538231 2_3:-7995288 None:intergenic
GTACATGTGAAGATTCCATC+AGG 0.542172 2_3:+7999000 Msa0275890:CDS
AAGGAGTGCGTCCCCATGAA+AGG 0.543141 2_3:-7999220 None:intergenic
ACGGACCTCATCAGCGCTGG+CGG 0.545644 2_3:-7995343 None:intergenic
AGGTCGTCGAGGCAGGATGA+TGG 0.546691 2_3:+7996566 Msa0275890:CDS
GGCTCGTTATAACTCTGTGA+AGG 0.546701 2_3:+7996661 Msa0275890:CDS
GGTTGTTGGCCCATGGTGGG+AGG 0.549182 2_3:-7995213 None:intergenic
CGGACCTCATCAGCGCTGGC+GGG 0.550273 2_3:-7995342 None:intergenic
ACATTGGGATCCTGTCCAGC+AGG 0.553089 2_3:-7999441 None:intergenic
AGTGGCAGGTCCAATCCTCA+TGG 0.559052 2_3:-7996810 None:intergenic
GGCATGGCTCCTCCCACCAT+GGG 0.562530 2_3:+7995204 Msa0275890:CDS
GCAGGGTAACCACCCTGGGT+TGG 0.563661 2_3:-7999357 None:intergenic
TTGAACGGTACTTTATTGGG+TGG 0.570868 2_3:+7999185 Msa0275890:CDS
CGTAATATCCACCAGCAGCA+GGG 0.575605 2_3:-7999374 None:intergenic
CGGTGATTTGCAGTACTGGA+TGG 0.577072 2_3:+7995377 Msa0275890:CDS
ACAACAACCGCCAGCTATGT+GGG 0.578681 2_3:+7995290 Msa0275890:CDS
GGGCTATGACTGAGATGCAA+GGG 0.579569 2_3:+7996768 Msa0275890:CDS
AATCACCGATCCAGAGAGTA+CGG 0.579736 2_3:-7995362 None:intergenic
CCGAGAGAGATGATGCAACC+AGG 0.585288 2_3:+7995177 Msa0275890:exon
AACTTGCCTCAGATGATCGT+CGG 0.588898 2_3:-7998956 None:intergenic
ATAATTCTCATAACCACCCT+GGG 0.588906 2_3:-7999403 None:intergenic
GGCTGTTGGTATTGTTGCGG+TGG 0.589555 2_3:-7995234 None:intergenic
AAGAATCCTTATTCCACGAA+GGG 0.590268 2_3:-7999597 None:intergenic
TGATTGATAGGCTTACTGGT+AGG 0.591076 2_3:+7996696 Msa0275890:CDS
CAACTTTCAGTGCTGGTGAG+AGG 0.591642 2_3:+7996546 Msa0275890:CDS
CTCGTTATAACTCTGTGAAG+GGG 0.593138 2_3:+7996663 Msa0275890:CDS
GGTGGCTGTTGGTATTGTTG+CGG 0.594122 2_3:-7995237 None:intergenic
AGTACGGACCTCATCAGCGC+TGG 0.598621 2_3:-7995346 None:intergenic
ATCATGACGTACGGCTGCTG+TGG 0.603814 2_3:-7995261 None:intergenic
GCAATCAAATGGGGAAGAGG+GGG 0.607457 2_3:-7999628 None:intergenic
CATAATTCTCATAACCACCC+TGG 0.609101 2_3:-7999404 None:intergenic
AAGCAAACTAGTCAATCAGA+AGG 0.612741 2_3:+7996416 Msa0275890:CDS
ATGACGTACGGCTGCTGTGG+TGG 0.613890 2_3:-7995258 None:intergenic
AGAGTGCTTCTGACATACAA+TGG 0.615716 2_3:+7996479 Msa0275890:CDS
GAGGTCCGTACTCTCTGGAT+CGG 0.617179 2_3:+7995357 Msa0275890:CDS
GGATATTACGGCTATGCCCA+GGG 0.617872 2_3:+7999387 Msa0275890:CDS
GCTGCCACCACTCAGCCGAA+AGG 0.617922 2_3:+7996845 Msa0275890:CDS
GTGGCAGGTCCAATCCTCAT+GGG 0.618279 2_3:-7996809 None:intergenic
ATAGCTGGCGGTTGTTGTGG+TGG 0.618727 2_3:-7995285 None:intergenic
CTGATGAGGGTGAACAGATG+AGG 0.619017 2_3:+7996747 Msa0275890:CDS
CAAAATGTTCGCCTTTCATG+GGG 0.619064 2_3:+7999209 Msa0275890:CDS
TCGTTATAACTCTGTGAAGG+GGG 0.622931 2_3:+7996664 Msa0275890:CDS
CAAACCTTTCGGCTGAGTGG+TGG 0.624684 2_3:-7996849 None:intergenic
AGACAAACCTTTCGGCTGAG+TGG 0.626497 2_3:-7996852 None:intergenic
AGGGCTATGACTGAGATGCA+AGG 0.628733 2_3:+7996767 Msa0275890:CDS
TAAGAATCCTTATTCCACGA+AGG 0.629680 2_3:-7999598 None:intergenic
GAGATGATGCAACCAGGACA+CGG 0.629747 2_3:+7995183 Msa0275890:exon
AGAAAGATATTATACCTCGC+CGG 0.630596 2_3:-7995433 None:intergenic
ATGTCACCGACGATCATCTG+AGG 0.632855 2_3:+7998950 Msa0275890:CDS
AATGGAACCATTATGCCGAA+TGG 0.635772 2_3:+7996497 Msa0275890:CDS
TATACCTGCTTCGGTAACAC+CGG 0.640046 2_3:+7995414 Msa0275890:CDS
TGTGGTGGCATCATGACGTA+CGG 0.642490 2_3:-7995270 None:intergenic
TCAAAACAGTACTGTCACAA+AGG 0.642504 2_3:-7999561 None:intergenic
GATGCAACCAGGACACGGCA+TGG 0.642660 2_3:+7995188 Msa0275890:CDS
GGGCTGCTGAGGAGGCTGAG+CGG 0.642669 2_3:-7995322 None:intergenic
TTGGGATCCTGTCCAGCAGG+AGG 0.643700 2_3:-7999438 None:intergenic
GGAACCATTATGCCGAATGG+TGG 0.645643 2_3:+7996500 Msa0275890:CDS
ATTCCATCAGGCAAGCGATG+CGG 0.646516 2_3:+7999012 Msa0275890:CDS
GACTCAACAAGATCCAACCC+AGG 0.647131 2_3:+7999344 Msa0275890:intron
TGGGCCGCCCACATAGCTGG+CGG 0.657827 2_3:-7995297 None:intergenic
TGATGAGGGTGAACAGATGA+GGG 0.661600 2_3:+7996748 Msa0275890:CDS
GGCTATGACTGAGATGCAAG+GGG 0.668121 2_3:+7996769 Msa0275890:CDS
TGTTGGTAACCAGGATACCC+CGG 0.677241 2_3:-7999477 None:intergenic
ACAACCGCCAGCTATGTGGG+CGG 0.687665 2_3:+7995293 Msa0275890:CDS
GTGCTGGTGAGAGGTCGTCG+AGG 0.694460 2_3:+7996555 Msa0275890:CDS
TTTGTTCAACAAGACCCATG+AGG 0.696574 2_3:+7996795 Msa0275890:CDS
ACTCAACAAGATCCAACCCA+GGG 0.701733 2_3:+7999345 Msa0275890:CDS
GCAGCTTCGTATAACCCTAG+TGG 0.702417 2_3:+7998795 Msa0275890:intron
GCTTCGTATAACCCTAGTGG+CGG 0.705338 2_3:+7998798 Msa0275890:intron
ATGTTACTAGCAATCAAATG+GGG 0.706400 2_3:-7999637 None:intergenic
ATGTGTATGGAAGTTATCCG+GGG 0.708244 2_3:+7999460 Msa0275890:CDS
CAACAAGATCCAACCCAGGG+TGG 0.719050 2_3:+7999348 Msa0275890:CDS
CTGCTTCGGTAACACCGGCG+AGG 0.749783 2_3:+7995419 Msa0275890:CDS
TATTACGGCTATGCCCAGGG+TGG 0.766971 2_3:+7999390 Msa0275890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTTTAATTTATAT+TGG + chr2_3:7998454-7998473 Msa0275890:intron 0.0%
!!! ATTTTTTATTGATTGATTAT+TGG + chr2_3:7995519-7995538 Msa0275890:intron 10.0%
!!! AAATTAGATTTTGTAATTTT+GGG + chr2_3:7995819-7995838 Msa0275890:intron 10.0%
!!! AATTTTCCTTTAAAAAAATT+GGG + chr2_3:7997108-7997127 Msa0275890:intron 10.0%
!!! TAATTGTTTTTACTTTTTAA+AGG + chr2_3:7997759-7997778 Msa0275890:intron 10.0%
!!! GAAATTAGATTTTGTAATTT+TGG + chr2_3:7995818-7995837 Msa0275890:intron 15.0%
!!! CAATTTTCCTTTAAAAAAAT+TGG + chr2_3:7997107-7997126 Msa0275890:intron 15.0%
!!! ATCCAATAATTTTTAAGTAA+AGG + chr2_3:7998058-7998077 Msa0275890:intron 15.0%
!!! TGTATTGAATTTGATTTATA+TGG + chr2_3:7998421-7998440 Msa0275890:intron 15.0%
!!! AGTGTTATTTTTTTATTTGA+TGG + chr2_3:7998528-7998547 Msa0275890:intron 15.0%
!! ACTATTTATTTAATAACCAA+AGG - chr2_3:7998687-7998706 None:intergenic 15.0%
!!! AAATTAGGGTGTTTTAATTT+TGG + chr2_3:7995674-7995693 Msa0275890:intron 20.0%
!!! GAAATTAGGGTTTTTAATTT+TGG + chr2_3:7995722-7995741 Msa0275890:intron 20.0%
!! TTTATCCTATTTGTGAAATT+AGG + chr2_3:7995756-7995775 Msa0275890:intron 20.0%
!! TTATCCTATTTGTGAAATTA+GGG + chr2_3:7995757-7995776 Msa0275890:intron 20.0%
!!! GAAATTAGGGTTTTTAATTT+TGG + chr2_3:7995722-7995741 Msa0275890:intron 20.0%
!!! TTTATTTTGTTAGTGAAATC+AGG + chr2_3:7995852-7995871 Msa0275890:intron 20.0%
!!! TTATTTTGTTAGTGAAATCA+GGG + chr2_3:7995853-7995872 Msa0275890:intron 20.0%
!!! AGCTGTTTTTAAAACTATAT+CGG + chr2_3:7996056-7996075 Msa0275890:intron 20.0%
!!! CAATTTTCACAATCTTTTTT+TGG - chr2_3:7996100-7996119 None:intergenic 20.0%
!!! TTTATTCTGTTTTTGAAAGT+AGG + chr2_3:7996242-7996261 Msa0275890:intron 20.0%
!!! TTATTCTGTTTTTGAAAGTA+GGG + chr2_3:7996243-7996262 Msa0275890:intron 20.0%
!!! AAATTTGGGTTTTGAAATTT+TGG + chr2_3:7996306-7996325 Msa0275890:intron 20.0%
!! ATTATTCTGTTAGTGAAATT+TGG + chr2_3:7996344-7996363 Msa0275890:intron 20.0%
!! TTATTCTGTTAGTGAAATTT+GGG + chr2_3:7996345-7996364 Msa0275890:intron 20.0%
!!! GTTTAAGTTATGATTCTTTT+CGG + chr2_3:7997042-7997061 Msa0275890:intron 20.0%
!!! TTTTTTTAAAGGAAAATTGC+AGG - chr2_3:7997106-7997125 None:intergenic 20.0%
!!! ATTTAGCCCAATTTTTTTAA+AGG - chr2_3:7997117-7997136 None:intergenic 20.0%
!! TGAAATAAATAAACATTTGC+TGG - chr2_3:7997558-7997577 None:intergenic 20.0%
!!! ATCTCAACATTTTTTTCTTA+TGG - chr2_3:7997597-7997616 None:intergenic 20.0%
!! AAATATATGAGAAGAATAAG+AGG - chr2_3:7997632-7997651 None:intergenic 20.0%
!! GTCCTTTACTTAAAAATTAT+TGG - chr2_3:7998063-7998082 None:intergenic 20.0%
!! TTAAATTGATAGAAGAGTAA+AGG + chr2_3:7998139-7998158 Msa0275890:intron 20.0%
!!! TCTTTCATTATTCTAAAACA+GGG - chr2_3:7998221-7998240 None:intergenic 20.0%
!!! TTTTTTTATTTGATGGTTTC+CGG + chr2_3:7998535-7998554 Msa0275890:intron 20.0%
!!! TTTTCATTGTAGATTTTTGT+TGG + chr2_3:7998913-7998932 Msa0275890:intron 20.0%
! AATTATCTATATACCTGCTT+CGG + chr2_3:7995405-7995424 Msa0275890:CDS 25.0%
! TCTCTCTTAATTGTAGAATT+AGG + chr2_3:7995455-7995474 Msa0275890:intron 25.0%
! CTCTCTTAATTGTAGAATTA+GGG + chr2_3:7995456-7995475 Msa0275890:intron 25.0%
!! TTGATTATTGGTGTAAGTTT+TGG + chr2_3:7995531-7995550 Msa0275890:intron 25.0%
! TTTATTCTGCTAGTGAATTT+AGG + chr2_3:7995566-7995585 Msa0275890:intron 25.0%
! TTTATCCTGTTTGTGAAATT+AGG + chr2_3:7995708-7995727 Msa0275890:intron 25.0%
! TTATCCTGTTTGTGAAATTA+GGG + chr2_3:7995709-7995728 Msa0275890:intron 25.0%
! AAAACCCTAATTTCACAAAT+AGG - chr2_3:7995764-7995783 None:intergenic 25.0%
!! TATTTTGTTAGTGAAATCAG+GGG + chr2_3:7995854-7995873 Msa0275890:intron 25.0%
!!! AAAGTAGGGTATTGTAATTT+TGG + chr2_3:7996257-7996276 Msa0275890:intron 25.0%
!!! GTATTGTAATTTTGGTTTGT+AGG + chr2_3:7996265-7996284 Msa0275890:intron 25.0%
! TTTATGCTGTTCGTAAAATT+TGG + chr2_3:7996291-7996310 Msa0275890:intron 25.0%
! TTATGCTGTTCGTAAAATTT+GGG + chr2_3:7996292-7996311 Msa0275890:intron 25.0%
! TCAGAATTACAGATTGAATT+GGG + chr2_3:7996523-7996542 Msa0275890:CDS 25.0%
!! ATGTTGGTTAGTTGAATTTA+AGG + chr2_3:7996974-7996993 Msa0275890:intron 25.0%
! ATACACTACAAAAGGTAATT+TGG - chr2_3:7997009-7997028 None:intergenic 25.0%
! AAAATGCCGCAAAAATATAA+CGG - chr2_3:7997302-7997321 None:intergenic 25.0%
! AGAGTAAAAACTAAACCAAA+AGG - chr2_3:7997361-7997380 None:intergenic 25.0%
! AACCAATAGGAGTAAATTAA+AGG - chr2_3:7997444-7997463 None:intergenic 25.0%
! AGTTCTTAAGAAAAACCAAT+AGG - chr2_3:7997457-7997476 None:intergenic 25.0%
! AATGTAAATAAGATCTGCTT+TGG - chr2_3:7997515-7997534 None:intergenic 25.0%
!!! AACATTTTTTTCTTATGGAC+GGG - chr2_3:7997592-7997611 None:intergenic 25.0%
!!! CAACATTTTTTTCTTATGGA+CGG - chr2_3:7997593-7997612 None:intergenic 25.0%
!! TCAAACATTTTCAGACTTAA+AGG - chr2_3:7997685-7997704 None:intergenic 25.0%
!! AGTAAAGGTATATCCAAATA+AGG + chr2_3:7998154-7998173 Msa0275890:intron 25.0%
!!! CTTTCATTATTCTAAAACAG+GGG - chr2_3:7998220-7998239 None:intergenic 25.0%
!!! CTCTTTCATTATTCTAAAAC+AGG - chr2_3:7998222-7998241 None:intergenic 25.0%
!!! CTGTTTTAGAATAATGAAAG+AGG + chr2_3:7998220-7998239 Msa0275890:intron 25.0%
!!! AAGTGACTAATTTGATTTTC+TGG + chr2_3:7998267-7998286 Msa0275890:intron 25.0%
! CAAATTCAATACATAGTTGT+CGG - chr2_3:7998414-7998433 None:intergenic 25.0%
! TAAATAAATAGTTGCACCTT+TGG + chr2_3:7998668-7998687 Msa0275890:intron 25.0%
! TATATTACCTGTTTGTTTGA+AGG - chr2_3:7999242-7999261 None:intergenic 25.0%
! AATGTTACTAGCAATCAAAT+GGG - chr2_3:7999641-7999660 None:intergenic 25.0%
!!! GCGCTTCAAATTTTTTTATT+GGG - chr2_3:7999822-7999841 None:intergenic 25.0%
!!! AGCGCTTCAAATTTTTTTAT+TGG - chr2_3:7999823-7999842 None:intergenic 25.0%
!!! AATTAGGGCTTTATTTTGTG+TGG + chr2_3:7995471-7995490 Msa0275890:intron 30.0%
TAAAACACCCTAATTTCTCA+AGG - chr2_3:7995670-7995689 None:intergenic 30.0%
AAAACCCTAATTTCACAAAC+AGG - chr2_3:7995716-7995735 None:intergenic 30.0%
!!! GAAATCAGGGGTTTTAATTT+TGG + chr2_3:7995866-7995885 Msa0275890:intron 30.0%
AATAAGCAGTTTATCCAAAC+AGG - chr2_3:7995932-7995951 None:intergenic 30.0%
GTCAGAATTACAGATTGAAT+TGG + chr2_3:7996522-7996541 Msa0275890:CDS 30.0%
ACCAACAAAAATGGTATGAT+CGG - chr2_3:7996594-7996613 None:intergenic 30.0%
!!! TACCATTTTTGTTGGTGATT+TGG + chr2_3:7996598-7996617 Msa0275890:CDS 30.0%
TATATGAGAGACAAACCTTT+CGG - chr2_3:7996863-7996882 None:intergenic 30.0%
CTTACTAATATGTGTGATGT+TGG + chr2_3:7996958-7996977 Msa0275890:intron 30.0%
AAAAGGTAATTTGGTACACA+AGG - chr2_3:7997000-7997019 None:intergenic 30.0%
AAATGCCGCAAAAATATAAC+GGG - chr2_3:7997301-7997320 None:intergenic 30.0%
TGACAAGAACTTGAAAATGT+AGG - chr2_3:7997333-7997352 None:intergenic 30.0%
! CTCCTTTAATTTACTCCTAT+TGG + chr2_3:7997439-7997458 Msa0275890:intron 30.0%
GAGGAACAAATAAGAATAAG+AGG - chr2_3:7997663-7997682 None:intergenic 30.0%
! AACATTTTCAGACTTAAAGG+AGG - chr2_3:7997682-7997701 None:intergenic 30.0%
GATAGAGATGATCAATTTCA+TGG + chr2_3:7997713-7997732 Msa0275890:intron 30.0%
! TGGTTTTTATCTGTGTGTAA+AGG + chr2_3:7997733-7997752 Msa0275890:intron 30.0%
AGATGAATTCAAACAGCTTA+TGG - chr2_3:7997803-7997822 None:intergenic 30.0%
!!! GTAGGGTTTTAGATAAAGAT+GGG + chr2_3:7997880-7997899 Msa0275890:intron 30.0%
!!! TAGGGTTTTAGATAAAGATG+GGG + chr2_3:7997881-7997900 Msa0275890:intron 30.0%
TATTCGTCATAATTCACAGT+TGG - chr2_3:7997921-7997940 None:intergenic 30.0%
! TTTCTTTTATATGACTGCCA+TGG + chr2_3:7997949-7997968 Msa0275890:intron 30.0%
TGTATCATTCGTATGATAGA+TGG - chr2_3:7998035-7998054 None:intergenic 30.0%
GGCTAACATATAACCTTATT+TGG - chr2_3:7998170-7998189 None:intergenic 30.0%
AAAATCACAAAGTGATACAC+AGG - chr2_3:7998320-7998339 None:intergenic 30.0%
AGTTTGATGTGATGAATTTG+TGG + chr2_3:7998349-7998368 Msa0275890:intron 30.0%
GTTTGATGTGATGAATTTGT+GGG + chr2_3:7998350-7998369 Msa0275890:intron 30.0%
TCACAGCAAGCAAATATTTA+GGG - chr2_3:7998609-7998628 None:intergenic 30.0%
TTCACAGCAAGCAAATATTT+AGG - chr2_3:7998610-7998629 None:intergenic 30.0%
ATGTACTAGTTCACCATATT+GGG - chr2_3:7998986-7999005 None:intergenic 30.0%
AATATTACCTGTCCGAAAAT+TGG - chr2_3:7999044-7999063 None:intergenic 30.0%
!! TGTTTTGAACGGTACTTTAT+TGG + chr2_3:7999181-7999200 Msa0275890:CDS 30.0%
!! GTTTTGAACGGTACTTTATT+GGG + chr2_3:7999182-7999201 Msa0275890:CDS 30.0%
ATGTTACTAGCAATCAAATG+GGG - chr2_3:7999640-7999659 None:intergenic 30.0%
CAATGTTACTAGCAATCAAA+TGG - chr2_3:7999642-7999661 None:intergenic 30.0%
CATTTGATTGCTAGTAACAT+TGG + chr2_3:7999640-7999659 Msa0275890:three_prime_UTR 30.0%
! TAACATTGGAGTTTTACCAA+AGG + chr2_3:7999654-7999673 Msa0275890:three_prime_UTR 30.0%
CATCAGCAAGCAAATTTAAA+GGG - chr2_3:7999689-7999708 None:intergenic 30.0%
TCATCAGCAAGCAAATTTAA+AGG - chr2_3:7999690-7999709 None:intergenic 30.0%
! CTTTAGATTTTTGACGACAT+TGG + chr2_3:7999719-7999738 Msa0275890:three_prime_UTR 30.0%
AGAAAGATATTATACCTCGC+CGG - chr2_3:7995436-7995455 None:intergenic 35.0%
!!! TGGTGTAAGTTTTGGTGTTA+AGG + chr2_3:7995539-7995558 Msa0275890:intron 35.0%
! ATTCACTCTGGTGCTAATTT+GGG - chr2_3:7995636-7995655 None:intergenic 35.0%
!!! GGGGTTTTAATTTTGGTTTG+TGG + chr2_3:7995873-7995892 Msa0275890:intron 35.0%
CGCTCTTATCATATAAGCAA+CGG + chr2_3:7995968-7995987 Msa0275890:intron 35.0%
GCTCTTATCATATAAGCAAC+GGG + chr2_3:7995969-7995988 Msa0275890:intron 35.0%
! TGTTAGGATTGGCATATTTG+AGG - chr2_3:7996183-7996202 None:intergenic 35.0%
CAATCCTAACAGATCCTATT+GGG + chr2_3:7996192-7996211 Msa0275890:intron 35.0%
TTATCCCAATAGGATCTGTT+AGG - chr2_3:7996199-7996218 None:intergenic 35.0%
TAACAGATCCTATTGGGATA+AGG + chr2_3:7996198-7996217 Msa0275890:intron 35.0%
AAGCAAACTAGTCAATCAGA+AGG + chr2_3:7996416-7996435 Msa0275890:CDS 35.0%
ACTAGTCAATCAGAAGGTTA+TGG + chr2_3:7996422-7996441 Msa0275890:CDS 35.0%
CCAACAAAAATGGTATGATC+GGG - chr2_3:7996593-7996612 None:intergenic 35.0%
AGCCAAATCACCAACAAAAA+TGG - chr2_3:7996603-7996622 None:intergenic 35.0%
!!! TTTTGTGAGATTTGCTGATG+AGG + chr2_3:7996733-7996752 Msa0275890:CDS 35.0%
!! TTTGTGAGATTTGCTGATGA+GGG + chr2_3:7996734-7996753 Msa0275890:CDS 35.0%
ATGTTTGTTCTGCTGCATAA+TGG + chr2_3:7996910-7996929 Msa0275890:intron 35.0%
CATTCAGCATACACTACAAA+AGG - chr2_3:7997017-7997036 None:intergenic 35.0%
ACATATAACTGACCTAAGCA+AGG - chr2_3:7997269-7997288 None:intergenic 35.0%
!! GTTTGCCCGTTATATTTTTG+CGG + chr2_3:7997293-7997312 Msa0275890:intron 35.0%
CAAGAACTTGAAAATGTAGG+CGG - chr2_3:7997330-7997349 None:intergenic 35.0%
GGAGTAAATTAAAGGAGCAA+AGG - chr2_3:7997436-7997455 None:intergenic 35.0%
CAGCTTATGGTATAATGCAT+AGG - chr2_3:7997790-7997809 None:intergenic 35.0%
TGACTGATCTAAAAGGGAAA+AGG - chr2_3:7997850-7997869 None:intergenic 35.0%
TCAGCATGACTGATCTAAAA+GGG - chr2_3:7997856-7997875 None:intergenic 35.0%
TTCAGCATGACTGATCTAAA+AGG - chr2_3:7997857-7997876 None:intergenic 35.0%
!!! CGTAGGGTTTTAGATAAAGA+TGG + chr2_3:7997879-7997898 Msa0275890:intron 35.0%
!!! AGGGTTTTAGATAAAGATGG+GGG + chr2_3:7997882-7997901 Msa0275890:intron 35.0%
! ACTGCCATGGTTTTCAAATT+GGG + chr2_3:7997962-7997981 Msa0275890:intron 35.0%
GATTCCCAATTTGAAAACCA+TGG - chr2_3:7997969-7997988 None:intergenic 35.0%
CAAGTACCTCACATTGTATT+GGG - chr2_3:7998112-7998131 None:intergenic 35.0%
ACAAGTACCTCACATTGTAT+TGG - chr2_3:7998113-7998132 None:intergenic 35.0%
TGTTACAATTTGCAGAAGAC+AGG - chr2_3:7998385-7998404 None:intergenic 35.0%
! TGACTTACATTTTCTTGCAC+CGG - chr2_3:7998557-7998576 None:intergenic 35.0%
! GTAGATTTTTGTTGGCAACT+TGG + chr2_3:7998921-7998940 Msa0275890:intron 35.0%
CATGTACTAGTTCACCATAT+TGG - chr2_3:7998987-7999006 None:intergenic 35.0%
TCCTGATGCAAGAAAAATGA+AGG - chr2_3:7999139-7999158 None:intergenic 35.0%
ACAAAATGTTCGCCTTTCAT+GGG + chr2_3:7999208-7999227 Msa0275890:CDS 35.0%
TTAACCTACCCTTGTAATTC+TGG + chr2_3:7999262-7999281 Msa0275890:intron 35.0%
TAACCTACCCTTGTAATTCT+GGG + chr2_3:7999263-7999282 Msa0275890:intron 35.0%
GCACGGTCATTAAAAAGATT+TGG - chr2_3:7999313-7999332 None:intergenic 35.0%
ATAATTCTCATAACCACCCT+GGG - chr2_3:7999406-7999425 None:intergenic 35.0%
GGATAACTTCCATACACATT+GGG - chr2_3:7999459-7999478 None:intergenic 35.0%
CAATGTGTATGGAAGTTATC+CGG + chr2_3:7999458-7999477 Msa0275890:CDS 35.0%
AATGTGTATGGAAGTTATCC+GGG + chr2_3:7999459-7999478 Msa0275890:CDS 35.0%
TCAAAACAGTACTGTCACAA+AGG - chr2_3:7999564-7999583 None:intergenic 35.0%
!! TTGTGACAGTACTGTTTTGA+TGG + chr2_3:7999564-7999583 Msa0275890:three_prime_UTR 35.0%
AAGAATCCTTATTCCACGAA+GGG - chr2_3:7999600-7999619 None:intergenic 35.0%
TAAGAATCCTTATTCCACGA+AGG - chr2_3:7999601-7999620 None:intergenic 35.0%
AGAGAGAGAAGTTTGTGTCT+TGG - chr2_3:7995106-7995125 None:intergenic 40.0%
! GATTCACTCTGGTGCTAATT+TGG - chr2_3:7995637-7995656 None:intergenic 40.0%
ACCTGAGACCTTGAGAAATT+AGG + chr2_3:7995659-7995678 Msa0275890:intron 40.0%
CCTGAGACCTTGAGAAATTA+GGG + chr2_3:7995660-7995679 Msa0275890:intron 40.0%
TCTGTTTACCAATCGCACTT+AGG + chr2_3:7995905-7995924 Msa0275890:intron 40.0%
CTGTTTACCAATCGCACTTA+GGG + chr2_3:7995906-7995925 Msa0275890:intron 40.0%
! GCATATTTGAGGTTATCGAC+TGG - chr2_3:7996172-7996191 None:intergenic 40.0%
CCAATAGGATCTGTTAGGAT+TGG - chr2_3:7996194-7996213 None:intergenic 40.0%
CCAATCCTAACAGATCCTAT+TGG + chr2_3:7996191-7996210 Msa0275890:intron 40.0%
GATCCTATTGGGATAAGGTT+TGG + chr2_3:7996203-7996222 Msa0275890:intron 40.0%
CAACCAAACCTTATCCCAAT+AGG - chr2_3:7996209-7996228 None:intergenic 40.0%
! AGAGTGCTTCTGACATACAA+TGG + chr2_3:7996479-7996498 Msa0275890:CDS 40.0%
AATGGAACCATTATGCCGAA+TGG + chr2_3:7996497-7996516 Msa0275890:CDS 40.0%
CTGTAATTCTGACCACCATT+CGG - chr2_3:7996515-7996534 None:intergenic 40.0%
!! CCCGATCATACCATTTTTGT+TGG + chr2_3:7996590-7996609 Msa0275890:CDS 40.0%
!!! TTTTGTTGGTGATTTGGCTG+CGG + chr2_3:7996604-7996623 Msa0275890:CDS 40.0%
! TGTTACTGATTACCTTCTCC+AGG + chr2_3:7996628-7996647 Msa0275890:CDS 40.0%
GCTCGTTATAACTCTGTGAA+GGG + chr2_3:7996662-7996681 Msa0275890:CDS 40.0%
CTCGTTATAACTCTGTGAAG+GGG + chr2_3:7996663-7996682 Msa0275890:CDS 40.0%
TCGTTATAACTCTGTGAAGG+GGG + chr2_3:7996664-7996683 Msa0275890:CDS 40.0%
GTTGTGATTGATAGGCTTAC+TGG + chr2_3:7996692-7996711 Msa0275890:CDS 40.0%
TGATTGATAGGCTTACTGGT+AGG + chr2_3:7996696-7996715 Msa0275890:CDS 40.0%
TTTGTTCAACAAGACCCATG+AGG + chr2_3:7996795-7996814 Msa0275890:CDS 40.0%
ACCTGCCACTAATAAAAACC+CGG + chr2_3:7996823-7996842 Msa0275890:CDS 40.0%
TGGACGGAAAATCTTCATGA+GGG - chr2_3:7997071-7997090 None:intergenic 40.0%
TTTCAGCTGAAATCAGTTCC+AGG - chr2_3:7997224-7997243 None:intergenic 40.0%
! GGAACTGATTTCAGCTGAAA+TGG + chr2_3:7997224-7997243 Msa0275890:intron 40.0%
AGCAAGGACATGCACTAAAA+TGG - chr2_3:7997253-7997272 None:intergenic 40.0%
TTTAGTGCATGTCCTTGCTT+AGG + chr2_3:7997254-7997273 Msa0275890:intron 40.0%
!! GTTCTTGTCATTTCGCCTTT+TGG + chr2_3:7997343-7997362 Msa0275890:intron 40.0%
TAAGATCTGCTTTGGCACAA+GGG - chr2_3:7997507-7997526 None:intergenic 40.0%
ATAAGATCTGCTTTGGCACA+AGG - chr2_3:7997508-7997527 None:intergenic 40.0%
! GACTGCCATGGTTTTCAAAT+TGG + chr2_3:7997961-7997980 Msa0275890:intron 40.0%
ATACCTCCCAATACAATGTG+AGG + chr2_3:7998103-7998122 Msa0275890:intron 40.0%
TGACTCAGAAGCAACAGAAT+GGG - chr2_3:7998583-7998602 None:intergenic 40.0%
! CTTGCTGTGAATTATGCCAA+CGG + chr2_3:7998619-7998638 Msa0275890:intron 40.0%
TTGCTGTGAATTATGCCAAC+GGG + chr2_3:7998620-7998639 Msa0275890:intron 40.0%
! GTACGCACAGTTGTGTTATT+GGG - chr2_3:7998840-7998859 None:intergenic 40.0%
AGTACGCACAGTTGTGTTAT+TGG - chr2_3:7998841-7998860 None:intergenic 40.0%
! AGGCAAGTTTTCACCCAATA+TGG + chr2_3:7998970-7998989 Msa0275890:CDS 40.0%
GTACATGTGAAGATTCCATC+AGG + chr2_3:7999000-7999019 Msa0275890:CDS 40.0%
! ATGCGGGTTTGTCCAATTTT+CGG + chr2_3:7999029-7999048 Msa0275890:CDS 40.0%
!! GCCTTCATTTTTCTTGCATC+AGG + chr2_3:7999135-7999154 Msa0275890:intron 40.0%
!! GAGGCAATACGTGTTTTGAA+CGG + chr2_3:7999170-7999189 Msa0275890:CDS 40.0%
TTGAACGGTACTTTATTGGG+TGG + chr2_3:7999185-7999204 Msa0275890:CDS 40.0%
GACAAAATGTTCGCCTTTCA+TGG + chr2_3:7999207-7999226 Msa0275890:CDS 40.0%
CAAAATGTTCGCCTTTCATG+GGG + chr2_3:7999209-7999228 Msa0275890:CDS 40.0%
AAACCAGCCCAGAATTACAA+GGG - chr2_3:7999273-7999292 None:intergenic 40.0%
TGAGTCTGAGAACAAAAGCA+CGG - chr2_3:7999330-7999349 None:intergenic 40.0%
CATAATTCTCATAACCACCC+TGG - chr2_3:7999407-7999426 None:intergenic 40.0%
CAGGGTGGTTATGAGAATTA+TGG + chr2_3:7999405-7999424 Msa0275890:CDS 40.0%
CGGATAACTTCCATACACAT+TGG - chr2_3:7999460-7999479 None:intergenic 40.0%
ATGTGTATGGAAGTTATCCG+GGG + chr2_3:7999460-7999479 Msa0275890:CDS 40.0%
TAGCAATCAAATGGGGAAGA+GGG - chr2_3:7999633-7999652 None:intergenic 40.0%
TAAAGGGATACAAGAGCCTT+TGG - chr2_3:7999673-7999692 None:intergenic 40.0%
AATCACCGATCCAGAGAGTA+CGG - chr2_3:7995365-7995384 None:intergenic 45.0%
TATACCTGCTTCGGTAACAC+CGG + chr2_3:7995414-7995433 Msa0275890:CDS 45.0%
! ACTCTGGTGCTAATTTGGGT+GGG - chr2_3:7995632-7995651 None:intergenic 45.0%
CCCTAATTTCTCAAGGTCTC+AGG - chr2_3:7995663-7995682 None:intergenic 45.0%
AATTGGGCAACTTTCAGTGC+TGG + chr2_3:7996539-7996558 Msa0275890:CDS 45.0%
! ACCTTCTCCAGGAGACTTTT+AGG + chr2_3:7996639-7996658 Msa0275890:CDS 45.0%
! CCTTCTCCAGGAGACTTTTA+GGG + chr2_3:7996640-7996659 Msa0275890:CDS 45.0%
GGCTCGTTATAACTCTGTGA+AGG + chr2_3:7996661-7996680 Msa0275890:CDS 45.0%
GGGCGAAAGTTGTGATTGAT+AGG + chr2_3:7996684-7996703 Msa0275890:CDS 45.0%
TAGGCTTACTGGTAGGTCTA+AGG + chr2_3:7996703-7996722 Msa0275890:CDS 45.0%
AGGCTTACTGGTAGGTCTAA+GGG + chr2_3:7996704-7996723 Msa0275890:CDS 45.0%
ACTGGTAGGTCTAAGGGATA+TGG + chr2_3:7996710-7996729 Msa0275890:CDS 45.0%
TGATGAGGGTGAACAGATGA+GGG + chr2_3:7996748-7996767 Msa0275890:CDS 45.0%
TCAACAAGACCCATGAGGAT+TGG + chr2_3:7996800-7996819 Msa0275890:CDS 45.0%
GTGGACGGAAAATCTTCATG+AGG - chr2_3:7997072-7997091 None:intergenic 45.0%
ATTGCAGGAAGAAACGACTG+TGG - chr2_3:7997091-7997110 None:intergenic 45.0%
AACTCCTGTTGTCTCAAAGC+AGG + chr2_3:7997171-7997190 Msa0275890:intron 45.0%
ACTCCTGTTGTCTCAAAGCA+GGG + chr2_3:7997172-7997191 Msa0275890:intron 45.0%
GGAGCAAAGGCTATGAATGA+TGG - chr2_3:7997423-7997442 None:intergenic 45.0%
GGGAAAAGGTGAGCAATTGA+TGG - chr2_3:7997836-7997855 None:intergenic 45.0%
ATCAGTCATGCTGAAGTCGT+AGG + chr2_3:7997862-7997881 Msa0275890:intron 45.0%
TCAGTCATGCTGAAGTCGTA+GGG + chr2_3:7997863-7997882 Msa0275890:intron 45.0%
GTACCTCACATTGTATTGGG+AGG - chr2_3:7998109-7998128 None:intergenic 45.0%
TATCCAACTGATGTGCTGCA+TGG + chr2_3:7998192-7998211 Msa0275890:intron 45.0%
CTGACTCAGAAGCAACAGAA+TGG - chr2_3:7998584-7998603 None:intergenic 45.0%
TGCTGTGAATTATGCCAACG+GGG + chr2_3:7998621-7998640 Msa0275890:intron 45.0%
AGATGATCGTCGGTGACATT+TGG - chr2_3:7998949-7998968 None:intergenic 45.0%
AACTTGCCTCAGATGATCGT+CGG - chr2_3:7998959-7998978 None:intergenic 45.0%
! GGTTTGTCCAATTTTCGGAC+AGG + chr2_3:7999034-7999053 Msa0275890:CDS 45.0%
ACGCACTCCTTCAAACAAAC+AGG + chr2_3:7999232-7999251 Msa0275890:CDS 45.0%
CAAACCAGCCCAGAATTACA+AGG - chr2_3:7999274-7999293 None:intergenic 45.0%
ACTCAACAAGATCCAACCCA+GGG + chr2_3:7999345-7999364 Msa0275890:CDS 45.0%
!! TTTGCTGTTGTTGCTGCTGT+GGG - chr2_3:7999503-7999522 None:intergenic 45.0%
!! ATTTGCTGTTGTTGCTGCTG+TGG - chr2_3:7999504-7999523 None:intergenic 45.0%
ACAGCAGCAACAACAGCAAA+TGG + chr2_3:7999503-7999522 Msa0275890:CDS 45.0%
CAGCAGCAACAACAGCAAAT+GGG + chr2_3:7999504-7999523 Msa0275890:CDS 45.0%
! GCTTTTCCCTTCGTGGAATA+AGG + chr2_3:7999591-7999610 Msa0275890:three_prime_UTR 45.0%
AGCAATCAAATGGGGAAGAG+GGG - chr2_3:7999632-7999651 None:intergenic 45.0%
CTAGCAATCAAATGGGGAAG+AGG - chr2_3:7999634-7999653 None:intergenic 45.0%
CCTGGTTGCATCATCTCTCT+CGG - chr2_3:7995180-7995199 None:intergenic 50.0%
GAGATGATGCAACCAGGACA+CGG + chr2_3:7995183-7995202 Msa0275890:exon 50.0%
GGTATTGTTGCGGTGGTTGT+TGG - chr2_3:7995230-7995249 None:intergenic 50.0%
GGTGGCTGTTGGTATTGTTG+CGG - chr2_3:7995240-7995259 None:intergenic 50.0%
TGTGGTGGCATCATGACGTA+CGG - chr2_3:7995273-7995292 None:intergenic 50.0%
ACAACAACCGCCAGCTATGT+GGG + chr2_3:7995290-7995309 Msa0275890:CDS 50.0%
! GGATCGGTGATTTGCAGTAC+TGG + chr2_3:7995373-7995392 Msa0275890:CDS 50.0%
! CGGTGATTTGCAGTACTGGA+TGG + chr2_3:7995377-7995396 Msa0275890:CDS 50.0%
! CACTCTGGTGCTAATTTGGG+TGG - chr2_3:7995633-7995652 None:intergenic 50.0%
GTCTCAGGTTCGATTCACTC+TGG - chr2_3:7995648-7995667 None:intergenic 50.0%
AAACAGGCCCTAAGTGCGAT+TGG - chr2_3:7995916-7995935 None:intergenic 50.0%
AATCGCACTTAGGGCCTGTT+TGG + chr2_3:7995915-7995934 Msa0275890:intron 50.0%
GGAACCATTATGCCGAATGG+TGG + chr2_3:7996500-7996519 Msa0275890:CDS 50.0%
CTGACCACCATTCGGCATAA+TGG - chr2_3:7996507-7996526 None:intergenic 50.0%
!! CAACTTTCAGTGCTGGTGAG+AGG + chr2_3:7996546-7996565 Msa0275890:CDS 50.0%
CCCTAAAAGTCTCCTGGAGA+AGG - chr2_3:7996643-7996662 None:intergenic 50.0%
AACGAGCCCTAAAAGTCTCC+TGG - chr2_3:7996649-7996668 None:intergenic 50.0%
CTGATGAGGGTGAACAGATG+AGG + chr2_3:7996747-7996766 Msa0275890:CDS 50.0%
AGGGCTATGACTGAGATGCA+AGG + chr2_3:7996767-7996786 Msa0275890:CDS 50.0%
GGGCTATGACTGAGATGCAA+GGG + chr2_3:7996768-7996787 Msa0275890:CDS 50.0%
GGCTATGACTGAGATGCAAG+GGG + chr2_3:7996769-7996788 Msa0275890:CDS 50.0%
! GCCGGGTTTTTATTAGTGGC+AGG - chr2_3:7996827-7996846 None:intergenic 50.0%
! GGCAGCCGGGTTTTTATTAG+TGG - chr2_3:7996831-7996850 None:intergenic 50.0%
AGACAAACCTTTCGGCTGAG+TGG - chr2_3:7996855-7996874 None:intergenic 50.0%
CAGGAAGAAACGACTGTGGA+CGG - chr2_3:7997087-7997106 None:intergenic 50.0%
!! ACACCCTGCTTTGAGACAAC+AGG - chr2_3:7997178-7997197 None:intergenic 50.0%
! TCTCAAAGCAGGGTGTCAAG+AGG + chr2_3:7997182-7997201 Msa0275890:intron 50.0%
GTCAAGAGGCTCTGTCATCT+CGG + chr2_3:7997196-7997215 Msa0275890:intron 50.0%
GCAGCACATCAGTTGGATAC+TGG - chr2_3:7998191-7998210 None:intergenic 50.0%
GATCCATGCAGCACATCAGT+TGG - chr2_3:7998198-7998217 None:intergenic 50.0%
TTGACCCATGATTGACTGCG+TGG + chr2_3:7998292-7998311 Msa0275890:intron 50.0%
ACAGTACAACAAGTCCCCGT+TGG - chr2_3:7998638-7998657 None:intergenic 50.0%
GCAGCTTCGTATAACCCTAG+TGG + chr2_3:7998795-7998814 Msa0275890:intron 50.0%
GCTTCGTATAACCCTAGTGG+CGG + chr2_3:7998798-7998817 Msa0275890:intron 50.0%
ATGTCACCGACGATCATCTG+AGG + chr2_3:7998950-7998969 Msa0275890:CDS 50.0%
ATTCCATCAGGCAAGCGATG+CGG + chr2_3:7999012-7999031 Msa0275890:CDS 50.0%
CAGCCCAGAATTACAAGGGT+AGG - chr2_3:7999269-7999288 None:intergenic 50.0%
CTACCCTTGTAATTCTGGGC+TGG + chr2_3:7999267-7999286 Msa0275890:intron 50.0%
GACTCAACAAGATCCAACCC+AGG + chr2_3:7999344-7999363 Msa0275890:intron 50.0%
CGTAATATCCACCAGCAGCA+GGG - chr2_3:7999377-7999396 None:intergenic 50.0%
! CCTGCTGCTGGTGGATATTA+CGG + chr2_3:7999375-7999394 Msa0275890:CDS 50.0%
TGGATATTACGGCTATGCCC+AGG + chr2_3:7999386-7999405 Msa0275890:CDS 50.0%
GGATATTACGGCTATGCCCA+GGG + chr2_3:7999387-7999406 Msa0275890:CDS 50.0%
GGACAGGATCCCAATGTGTA+TGG + chr2_3:7999447-7999466 Msa0275890:CDS 50.0%
!! TGTTGGTAACCAGGATACCC+CGG - chr2_3:7999480-7999499 None:intergenic 50.0%
!!! TGGAGTTGCTTTTCCCTTCG+TGG + chr2_3:7999584-7999603 Msa0275890:three_prime_UTR 50.0%
AAATGGGGAAGAGGGGGAAA+AGG - chr2_3:7999625-7999644 None:intergenic 50.0%
GCAATCAAATGGGGAAGAGG+GGG - chr2_3:7999631-7999650 None:intergenic 50.0%
CCGAGAGAGATGATGCAACC+AGG + chr2_3:7995177-7995196 Msa0275890:exon 55.0%
GGCTGTTGGTATTGTTGCGG+TGG - chr2_3:7995237-7995256 None:intergenic 55.0%
ATCATGACGTACGGCTGCTG+TGG - chr2_3:7995264-7995283 None:intergenic 55.0%
ATAGCTGGCGGTTGTTGTGG+TGG - chr2_3:7995288-7995307 None:intergenic 55.0%
CACATAGCTGGCGGTTGTTG+TGG - chr2_3:7995291-7995310 None:intergenic 55.0%
CACAACAACCGCCAGCTATG+TGG + chr2_3:7995289-7995308 Msa0275890:CDS 55.0%
CTGATGAGGTCCGTACTCTC+TGG + chr2_3:7995352-7995371 Msa0275890:CDS 55.0%
GAGGTCCGTACTCTCTGGAT+CGG + chr2_3:7995357-7995376 Msa0275890:CDS 55.0%
GTGGCAGGTCCAATCCTCAT+GGG - chr2_3:7996812-7996831 None:intergenic 55.0%
AGTGGCAGGTCCAATCCTCA+TGG - chr2_3:7996813-7996832 None:intergenic 55.0%
CAAACCTTTCGGCTGAGTGG+TGG - chr2_3:7996852-7996871 None:intergenic 55.0%
GGCTCCACGCAGTCAATCAT+GGG - chr2_3:7998299-7998318 None:intergenic 55.0%
AGGCTCCACGCAGTCAATCA+TGG - chr2_3:7998300-7998319 None:intergenic 55.0%
TCTCGCTTTGTCCGCCACTA+GGG - chr2_3:7998812-7998831 None:intergenic 55.0%
TTCTCGCTTTGTCCGCCACT+AGG - chr2_3:7998813-7998832 None:intergenic 55.0%
TTCCATCAGGCAAGCGATGC+GGG + chr2_3:7999013-7999032 Msa0275890:CDS 55.0%
CATCAGGAGCTGTGCAGAAG+AGG + chr2_3:7999151-7999170 Msa0275890:intron 55.0%
! AAGGAGTGCGTCCCCATGAA+AGG - chr2_3:7999223-7999242 None:intergenic 55.0%
CAACAAGATCCAACCCAGGG+TGG + chr2_3:7999348-7999367 Msa0275890:CDS 55.0%
CCGTAATATCCACCAGCAGC+AGG - chr2_3:7999378-7999397 None:intergenic 55.0%
TATTACGGCTATGCCCAGGG+TGG + chr2_3:7999390-7999409 Msa0275890:CDS 55.0%
ACATTGGGATCCTGTCCAGC+AGG - chr2_3:7999444-7999463 None:intergenic 55.0%
! GGAAGTTATCCGGGGTATCC+TGG + chr2_3:7999468-7999487 Msa0275890:CDS 55.0%
!! TGCTGTGGGTGTTGGTAACC+AGG - chr2_3:7999489-7999508 None:intergenic 55.0%
GTTGTTGCTGCTGTGGGTGT+TGG - chr2_3:7999497-7999516 None:intergenic 55.0%
GATGCAACCAGGACACGGCA+TGG + chr2_3:7995188-7995207 Msa0275890:CDS 60.0%
GGTGGTTGTTGGCCCATGGT+GGG - chr2_3:7995219-7995238 None:intergenic 60.0%
TTGCGGTGGTTGTTGGCCCA+TGG - chr2_3:7995223-7995242 None:intergenic 60.0%
ATGACGTACGGCTGCTGTGG+TGG - chr2_3:7995261-7995280 None:intergenic 60.0%
ACAACCGCCAGCTATGTGGG+CGG + chr2_3:7995293-7995312 Msa0275890:CDS 60.0%
! CTGAGGAGGCTGAGCGGATT+GGG - chr2_3:7995319-7995338 None:intergenic 60.0%
AGTACGGACCTCATCAGCGC+TGG - chr2_3:7995349-7995368 None:intergenic 60.0%
AGGTCGTCGAGGCAGGATGA+TGG + chr2_3:7996566-7996585 Msa0275890:CDS 60.0%
AACCCGCATCGCTTGCCTGA+TGG - chr2_3:7999018-7999037 None:intergenic 60.0%
AGCAGCAGGGTAACCACCCT+GGG - chr2_3:7999364-7999383 None:intergenic 60.0%
TTGGGATCCTGTCCAGCAGG+AGG - chr2_3:7999441-7999460 None:intergenic 60.0%
GGCATGGCTCCTCCCACCAT+GGG + chr2_3:7995204-7995223 Msa0275890:CDS 65.0%
! GGTTGTTGGCCCATGGTGGG+AGG - chr2_3:7995216-7995235 None:intergenic 65.0%
CGGTGGTTGTTGGCCCATGG+TGG - chr2_3:7995220-7995239 None:intergenic 65.0%
!! GCTGCTGTGGTGGTGGCTGT+TGG - chr2_3:7995251-7995270 None:intergenic 65.0%
ACGTACGGCTGCTGTGGTGG+TGG - chr2_3:7995258-7995277 None:intergenic 65.0%
GATTGGGCCGCCCACATAGC+TGG - chr2_3:7995303-7995322 None:intergenic 65.0%
GCTGAGGAGGCTGAGCGGAT+TGG - chr2_3:7995320-7995339 None:intergenic 65.0%
! ACGGACCTCATCAGCGCTGG+CGG - chr2_3:7995346-7995365 None:intergenic 65.0%
!! CTCGCCGGTGTTACCGAAGC+AGG - chr2_3:7995421-7995440 None:intergenic 65.0%
CTGCTTCGGTAACACCGGCG+AGG + chr2_3:7995419-7995438 Msa0275890:CDS 65.0%
! GTGCTGGTGAGAGGTCGTCG+AGG + chr2_3:7996555-7996574 Msa0275890:CDS 65.0%
TGGTGAGAGGTCGTCGAGGC+AGG + chr2_3:7996559-7996578 Msa0275890:CDS 65.0%
TTCGGCTGAGTGGTGGCAGC+CGG - chr2_3:7996845-7996864 None:intergenic 65.0%
GCTGCCACCACTCAGCCGAA+AGG + chr2_3:7996845-7996864 Msa0275890:CDS 65.0%
GGCTCTGTCATCTCGGAGCC+TGG + chr2_3:7997203-7997222 Msa0275890:intron 65.0%
GCAGGGTAACCACCCTGGGT+TGG - chr2_3:7999360-7999379 None:intergenic 65.0%
CAGCAGCAGGGTAACCACCC+TGG - chr2_3:7999365-7999384 None:intergenic 65.0%
CAGGGTGGTTACCCTGCTGC+TGG + chr2_3:7999363-7999382 Msa0275890:CDS 65.0%
GGTGGTTACCCTGCTGCTGG+TGG + chr2_3:7999366-7999385 Msa0275890:CDS 65.0%
GGTTACGCTGCTCCTCCTGC+TGG + chr2_3:7999426-7999445 Msa0275890:CDS 65.0%
GGAGGAGCCATGCCGTGTCC+TGG - chr2_3:7995198-7995217 None:intergenic 70.0%
CGGCATGGCTCCTCCCACCA+TGG + chr2_3:7995203-7995222 Msa0275890:CDS 70.0%
TGGGCCGCCCACATAGCTGG+CGG - chr2_3:7995300-7995319 None:intergenic 70.0%
GGGCTGCTGAGGAGGCTGAG+CGG - chr2_3:7995325-7995344 None:intergenic 70.0%
!! CGGACCTCATCAGCGCTGGC+GGG - chr2_3:7995345-7995364 None:intergenic 70.0%
TCGGCTGAGTGGTGGCAGCC+GGG - chr2_3:7996844-7996863 None:intergenic 70.0%
CGCTGCTCCTCCTGCTGGAC+AGG + chr2_3:7999431-7999450 Msa0275890:CDS 70.0%
!! TCAGCGCTGGCGGGCTGCTG+AGG - chr2_3:7995336-7995355 None:intergenic 75.0%
!! GCAGCCCGCCAGCGCTGATG+AGG + chr2_3:7995338-7995357 Msa0275890:CDS 75.0%
!!! GCGCTGGCGGGCTGCTGAGG+AGG - chr2_3:7995333-7995352 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 7995072 7999871 7995072 ID=Msa0275890;Name=Msa0275890
chr2_3 mRNA 7995072 7999871 7995072 ID=Msa0275890-mRNA-1;Parent=Msa0275890;Name=Msa0275890-mRNA-1;_AED=0.26;_eAED=0.26;_QI=114|1|1|1|1|1|6|335|401
chr2_3 exon 7995072 7995440 7995072 ID=Msa0275890-mRNA-1:exon:3664;Parent=Msa0275890-mRNA-1
chr2_3 exon 7996389 7996866 7996389 ID=Msa0275890-mRNA-1:exon:3665;Parent=Msa0275890-mRNA-1
chr2_3 exon 7998799 7998851 7998799 ID=Msa0275890-mRNA-1:exon:3666;Parent=Msa0275890-mRNA-1
chr2_3 exon 7998925 7999055 7998925 ID=Msa0275890-mRNA-1:exon:3667;Parent=Msa0275890-mRNA-1
chr2_3 exon 7999157 7999253 7999157 ID=Msa0275890-mRNA-1:exon:3668;Parent=Msa0275890-mRNA-1
chr2_3 exon 7999345 7999871 7999345 ID=Msa0275890-mRNA-1:exon:3669;Parent=Msa0275890-mRNA-1
chr2_3 five_prime_UTR 7995072 7995185 7995072 ID=Msa0275890-mRNA-1:five_prime_utr;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7995186 7995440 7995186 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7996389 7996866 7996389 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7998799 7998851 7998799 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7998925 7999055 7998925 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7999157 7999253 7999157 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 CDS 7999345 7999536 7999345 ID=Msa0275890-mRNA-1:cds;Parent=Msa0275890-mRNA-1
chr2_3 three_prime_UTR 7999537 7999871 7999537 ID=Msa0275890-mRNA-1:three_prime_utr;Parent=Msa0275890-mRNA-1
Gene Sequence

>Msa0275890

ATGATGCAACCAGGACACGGCATGGCTCCTCCCACCATGGGCCAACAACCACCGCAACAATACCAACAGCCACCACCACAGCAGCCGTACGTCATGATGCCACCACAACAACCGCCAGCTATGTGGGCGGCCCAATCCGCTCAGCCTCCTCAGCAGCCCGCCAGCGCTGATGAGGTCCGTACTCTCTGGATCGGTGATTTGCAGTACTGGATGGATGAGAATTATCTATATACCTGCTTCGGTAACACCGGCGAGTTGACATCTGTGAAAGTTATTAGAAATAAGCAAACTAGTCAATCAGAAGGTTATGGCTTTATCGAGTTTAATACTCGTGCTACTGCTGAGAGAGTGCTTCTGACATACAATGGAACCATTATGCCGAATGGTGGTCAGAATTACAGATTGAATTGGGCAACTTTCAGTGCTGGTGAGAGGTCGTCGAGGCAGGATGATGGTCCCGATCATACCATTTTTGTTGGTGATTTGGCTGCGGATGTTACTGATTACCTTCTCCAGGAGACTTTTAGGGCTCGTTATAACTCTGTGAAGGGGGCGAAAGTTGTGATTGATAGGCTTACTGGTAGGTCTAAGGGATATGGTTTTGTGAGATTTGCTGATGAGGGTGAACAGATGAGGGCTATGACTGAGATGCAAGGGGTTCTTTGTTCAACAAGACCCATGAGGATTGGACCTGCCACTAATAAAAACCCGGCTGCCACCACTCAGCCGAAAGCTTCGTATAACCCTAGTGGCGGACAAAGCGAGAATGATCCCAATAACACAACTATTTTTGTTGGCAACTTGGATCCAAATGTCACCGACGATCATCTGAGGCAAGTTTTCACCCAATATGGTGAACTAGTACATGTGAAGATTCCATCAGGCAAGCGATGCGGGTTTGTCCAATTTTCGGACAGGAGCTGTGCAGAAGAGGCAATACGTGTTTTGAACGGTACTTTATTGGGTGGACAAAATGTTCGCCTTTCATGGGGACGCACTCCTTCAAACAAACAGACTCAACAAGATCCAACCCAGGGTGGTTACCCTGCTGCTGGTGGATATTACGGCTATGCCCAGGGTGGTTATGAGAATTATGGTTACGCTGCTCCTCCTGCTGGACAGGATCCCAATGTGTATGGAAGTTATCCGGGGTATCCTGGTTACCAACACCCACAGCAGCAACAACAGCAAATGGGATATAGCTAA
Protein sequence

>Msa0275890

MMQPGHGMAPPTMGQQPPQQYQQPPPQQPYVMMPPQQPPAMWAAQSAQPPQQPASADEVRTLWIGDLQYWMDENYLYTCFGNTGELTSVKVIRNKQTSQSEGYGFIEFNTRATAERVLLTYNGTIMPNGGQNYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQPKASYNPSGGQSENDPNNTTIFVGNLDPNVTDDHLRQVFTQYGELVHVKIPSGKRCGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDPTQGGYPAAGGYYGYAQGGYENYGYAAPPAGQDPNVYGSYPGYPGYQHPQQQQQQMGYS*