Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238420 | XP_013462803.1 | 99.501 | 401 | 2 | 0 | 1 | 401 | 1 | 401 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238420 | sp|Q9LEB4|RBP45_NICPL | 63.102 | 374 | 118 | 6 | 21 | 393 | 55 | 409 | 1.59e-157 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238420 | A0A072V5A8 | 99.501 | 401 | 2 | 0 | 1 | 401 | 1 | 401 | 0.0 | 822 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014790 | Msa0238420 | -0.805196 | 1.500465e-49 | -8.615850e-47 |
| Msa0025060 | Msa0238420 | -0.806271 | 8.922352e-50 | -8.615850e-47 |
| Msa0026120 | Msa0238420 | -0.810271 | 1.252463e-50 | -8.615850e-47 |
| Msa0028050 | Msa0238420 | -0.803245 | 3.821589e-49 | -8.615850e-47 |
| Msa0036560 | Msa0238420 | -0.810881 | 9.244519e-51 | -8.615850e-47 |
| Msa0039590 | Msa0238420 | -0.800411 | 1.459256e-48 | -8.615850e-47 |
| Msa0063100 | Msa0238420 | -0.801924 | 7.155844e-49 | -8.615850e-47 |
| Msa0064190 | Msa0238420 | -0.820242 | 7.605470e-53 | -8.615850e-47 |
| Msa0071640 | Msa0238420 | 0.843845 | 1.090601e-58 | -8.615850e-47 |
| Msa0072710 | Msa0238420 | -0.821482 | 3.943536e-53 | -8.615850e-47 |
| Msa0079550 | Msa0238420 | -0.820348 | 7.192511e-53 | -8.615850e-47 |
| Msa0094990 | Msa0238420 | -0.802598 | 5.199776e-49 | -8.615850e-47 |
| Msa0106810 | Msa0238420 | -0.804158 | 2.470335e-49 | -8.615850e-47 |
| Msa0118250 | Msa0238420 | -0.809627 | 1.723734e-50 | -8.615850e-47 |
| Msa0121080 | Msa0238420 | -0.810431 | 1.156475e-50 | -8.615850e-47 |
| Msa0121460 | Msa0238420 | -0.812280 | 4.589027e-51 | -8.615850e-47 |
| Msa0131090 | Msa0238420 | -0.803864 | 2.844340e-49 | -8.615850e-47 |
| Msa0139280 | Msa0238420 | -0.830658 | 2.593662e-55 | -8.615850e-47 |
| Msa0147540 | Msa0238420 | -0.804703 | 1.901780e-49 | -8.615850e-47 |
| Msa0153890 | Msa0238420 | -0.807115 | 5.917965e-50 | -8.615850e-47 |
| Msa0166580 | Msa0238420 | -0.817665 | 2.930693e-52 | -8.615850e-47 |
| Msa0173260 | Msa0238420 | 0.809461 | 1.871207e-50 | -8.615850e-47 |
| Msa0176610 | Msa0238420 | -0.820049 | 8.422683e-53 | -8.615850e-47 |
| Msa0184030 | Msa0238420 | -0.808651 | 2.789583e-50 | -8.615850e-47 |
| Msa0192890 | Msa0238420 | 0.840390 | 8.948645e-58 | -8.615850e-47 |
| Msa0196530 | Msa0238420 | 0.944360 | 2.250903e-103 | -8.615850e-47 |
| Msa0206600 | Msa0238420 | -0.826561 | 2.535148e-54 | -8.615850e-47 |
| Msa0222720 | Msa0238420 | -0.812361 | 4.407935e-51 | -8.615850e-47 |
| Msa0223050 | Msa0238420 | 0.830448 | 2.920018e-55 | -8.615850e-47 |
| Msa0225370 | Msa0238420 | -0.812504 | 4.100319e-51 | -8.615850e-47 |
| Msa0226580 | Msa0238420 | -0.812949 | 3.277444e-51 | -8.615850e-47 |
| Msa0228080 | Msa0238420 | -0.804090 | 2.552475e-49 | -8.615850e-47 |
| Msa0235020 | Msa0238420 | 0.847204 | 1.340782e-59 | -8.615850e-47 |
| Msa0238420 | Msa0251140 | -0.837137 | 6.207117e-57 | -8.615850e-47 |
| Msa0238420 | Msa0264020 | -0.808169 | 3.534002e-50 | -8.615850e-47 |
| Msa0238420 | Msa0266380 | -0.827643 | 1.397073e-54 | -8.615850e-47 |
| Msa0238420 | Msa0272420 | -0.830890 | 2.276033e-55 | -8.615850e-47 |
| Msa0238420 | Msa0273420 | 0.848620 | 5.459109e-60 | -8.615850e-47 |
| Msa0238420 | Msa0275890 | 0.826815 | 2.205807e-54 | -8.615850e-47 |
| Msa0238420 | Msa0283230 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0238420 | Msa0302220 | 0.822628 | 2.139564e-53 | -8.615850e-47 |
| Msa0238420 | Msa0312570 | -0.816791 | 4.608457e-52 | -8.615850e-47 |
| Msa0238420 | Msa0313680 | 0.843734 | 1.167711e-58 | -8.615850e-47 |
| Msa0238420 | Msa0315010 | -0.816894 | 4.370555e-52 | -8.615850e-47 |
| Msa0238420 | Msa0316140 | 0.855895 | 4.638981e-62 | -8.615850e-47 |
| Msa0238420 | Msa0327870 | -0.800764 | 1.236680e-48 | -8.615850e-47 |
| Msa0238420 | Msa0339540 | 0.838247 | 3.221529e-57 | -8.615850e-47 |
| Msa0238420 | Msa0341860 | -0.828543 | 8.482036e-55 | -8.615850e-47 |
| Msa0238420 | Msa0349980 | -0.809002 | 2.346486e-50 | -8.615850e-47 |
| Msa0238420 | Msa0357090 | -0.816265 | 6.045416e-52 | -8.615850e-47 |
| Msa0238420 | Msa0358720 | -0.818992 | 1.467061e-52 | -8.615850e-47 |
| Msa0238420 | Msa0359630 | -0.802818 | 4.682874e-49 | -8.615850e-47 |
| Msa0238420 | Msa0372250 | -0.835936 | 1.255512e-56 | -8.615850e-47 |
| Msa0238420 | Msa0372990 | -0.806213 | 9.173471e-50 | -8.615850e-47 |
| Msa0238420 | Msa0375500 | 0.839204 | 1.822481e-57 | -8.615850e-47 |
| Msa0238420 | Msa0384220 | 0.828720 | 7.685068e-55 | -8.615850e-47 |
| Msa0238420 | Msa0404880 | -0.801947 | 7.079872e-49 | -8.615850e-47 |
| Msa0238420 | Msa0409000 | -0.805145 | 1.537541e-49 | -8.615850e-47 |
| Msa0238420 | Msa0423590 | -0.805527 | 1.278428e-49 | -8.615850e-47 |
| Msa0238420 | Msa0424300 | 0.817317 | 3.510998e-52 | -8.615850e-47 |
| Msa0238420 | Msa0434890 | 0.803302 | 3.720279e-49 | -8.615850e-47 |
| Msa0238420 | Msa0438440 | -0.815180 | 1.055118e-51 | -8.615850e-47 |
| Msa0238420 | Msa0444310 | -0.814010 | 1.915000e-51 | -8.615850e-47 |
| Msa0238420 | Msa0452120 | -0.812085 | 5.062235e-51 | -8.615850e-47 |
| Msa0238420 | Msa0452180 | -0.804430 | 2.168054e-49 | -8.615850e-47 |
| Msa0238420 | Msa0453310 | -0.817685 | 2.900764e-52 | -8.615850e-47 |
| Msa0238420 | Msa0459920 | -0.823268 | 1.518138e-53 | -8.615850e-47 |
| Msa0238420 | Msa0471210 | 0.842310 | 2.796459e-58 | -8.615850e-47 |
| Msa0238420 | Msa0480940 | 0.806594 | 7.625451e-50 | -8.615850e-47 |
| Msa0238420 | Msa0481320 | -0.810580 | 1.073864e-50 | -8.615850e-47 |
| Msa0238420 | Msa0488900 | -0.828030 | 1.127349e-54 | -8.615850e-47 |
| Msa0238420 | Msa0512430 | -0.809140 | 2.192338e-50 | -8.615850e-47 |
| Msa0238420 | Msa0515930 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0238420 | Msa0521100 | -0.818355 | 2.047059e-52 | -8.615850e-47 |
| Msa0238420 | Msa0528170 | -0.807238 | 5.573289e-50 | -8.615850e-47 |
| Msa0238420 | Msa0533140 | -0.834647 | 2.655755e-56 | -8.615850e-47 |
| Msa0238420 | Msa0540160 | -0.822904 | 1.845505e-53 | -8.615850e-47 |
| Msa0238420 | Msa0543310 | -0.841869 | 3.656469e-58 | -8.615850e-47 |
| Msa0238420 | Msa0548070 | 0.835895 | 1.285362e-56 | -8.615850e-47 |
| Msa0238420 | Msa0555510 | -0.811646 | 6.309835e-51 | -8.615850e-47 |
| Msa0238420 | Msa0565530 | -0.800179 | 1.627253e-48 | -8.615850e-47 |
| Msa0238420 | Msa0569290 | -0.808453 | 3.073989e-50 | -8.615850e-47 |
| Msa0238420 | Msa0589540 | -0.839431 | 1.591270e-57 | -8.615850e-47 |
| Msa0238420 | Msa0599250 | -0.837751 | 4.319840e-57 | -8.615850e-47 |
| Msa0238420 | Msa0605020 | 0.805724 | 1.162873e-49 | -8.615850e-47 |
| Msa0238420 | Msa0607440 | -0.806865 | 6.684460e-50 | -8.615850e-47 |
| Msa0238420 | Msa0607620 | -0.815803 | 7.665721e-52 | -8.615850e-47 |
| Msa0238420 | Msa0608940 | -0.814600 | 1.418303e-51 | -8.615850e-47 |
| Msa0238420 | Msa0618490 | -0.828927 | 6.845951e-55 | -8.615850e-47 |
| Msa0238420 | Msa0619460 | -0.801075 | 1.068345e-48 | -8.615850e-47 |
| Msa0238420 | Msa0619520 | -0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0238420 | Msa0625310 | -0.808200 | 3.481239e-50 | -8.615850e-47 |
| Msa0238420 | Msa0639880 | -0.825868 | 3.705765e-54 | -8.615850e-47 |
| Msa0238420 | Msa0649530 | -0.820590 | 6.328354e-53 | -8.615850e-47 |
| Msa0238420 | Msa0674680 | -0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0238420 | Msa0688760 | -0.806316 | 8.728215e-50 | -8.615850e-47 |
| Msa0238420 | Msa0690580 | -0.807675 | 4.502572e-50 | -8.615850e-47 |
| Msa0238420 | Msa0691740 | -0.809843 | 1.548259e-50 | -8.615850e-47 |
| Msa0238420 | Msa0709820 | 0.820251 | 7.571131e-53 | -8.615850e-47 |
| Msa0238420 | Msa0712440 | -0.811857 | 5.675822e-51 | -8.615850e-47 |
| Msa0238420 | Msa0729920 | -0.838995 | 2.063756e-57 | -8.615850e-47 |
| Msa0238420 | Msa0733140 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0238420 | Msa0733670 | 0.808882 | 2.488852e-50 | -8.615850e-47 |
| Msa0238420 | Msa0735340 | 0.803733 | 3.028270e-49 | -8.615850e-47 |
| Msa0238420 | Msa0752540 | -0.837129 | 6.234290e-57 | -8.615850e-47 |
| Msa0238420 | Msa0770890 | -0.821905 | 3.148905e-53 | -8.615850e-47 |
| Msa0238420 | Msa0774560 | -0.803551 | 3.303059e-49 | -8.615850e-47 |
| Msa0238420 | Msa0814350 | 0.803722 | 3.043449e-49 | -8.615850e-47 |
| Msa0238420 | Msa0829430 | -0.808013 | 3.814407e-50 | -8.615850e-47 |
| Msa0238420 | Msa0830830 | -0.817709 | 2.865331e-52 | -8.615850e-47 |
| Msa0238420 | Msa0849130 | -0.809221 | 2.106323e-50 | -8.615850e-47 |
| Msa0238420 | Msa0854860 | 0.810732 | 9.960245e-51 | -8.615850e-47 |
| Msa0238420 | Msa0868040 | -0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0238420 | Msa0878410 | 0.801187 | 1.013583e-48 | -8.615850e-47 |
| Msa0238420 | Msa0883410 | -0.800159 | 1.642243e-48 | -8.615850e-47 |
| Msa0238420 | Msa0883430 | -0.806141 | 9.499396e-50 | -8.615850e-47 |
| Msa0238420 | Msa0883690 | -0.811977 | 5.345274e-51 | -8.615850e-47 |
| Msa0238420 | Msa0917630 | -0.802271 | 6.073214e-49 | -8.615850e-47 |
| Msa0238420 | Msa0947400 | -0.803680 | 3.105114e-49 | -8.615850e-47 |
| Msa0238420 | Msa0957800 | -0.801241 | 9.879616e-49 | -8.615850e-47 |
| Msa0238420 | Msa0984820 | -0.819034 | 1.435515e-52 | -8.615850e-47 |
| Msa0238420 | Msa0984830 | -0.812383 | 4.358490e-51 | -8.615850e-47 |
| Msa0238420 | Msa0984840 | -0.846576 | 1.991241e-59 | -8.615850e-47 |
| Msa0238420 | Msa0984850 | -0.831046 | 2.084524e-55 | -8.615850e-47 |
| Msa0238420 | Msa0984860 | -0.830616 | 2.656255e-55 | -8.615850e-47 |
| Msa0238420 | Msa0985040 | -0.846520 | 2.063126e-59 | -8.615850e-47 |
| Msa0238420 | Msa1009170 | -0.802815 | 4.691090e-49 | -8.615850e-47 |
| Msa0238420 | Msa1009220 | -0.819121 | 1.371563e-52 | -8.615850e-47 |
| Msa0238420 | Msa1034870 | 0.822228 | 2.650718e-53 | -8.615850e-47 |
| Msa0238420 | Msa1036360 | -0.804920 | 1.713519e-49 | -8.615850e-47 |
| Msa0238420 | Msa1050320 | -0.818097 | 2.341101e-52 | -8.615850e-47 |
| Msa0238420 | Msa1072640 | -0.815009 | 1.151270e-51 | -8.615850e-47 |
| Msa0238420 | Msa1074910 | 0.821574 | 3.755847e-53 | -8.615850e-47 |
| Msa0238420 | Msa1076640 | -0.807688 | 4.472696e-50 | -8.615850e-47 |
| Msa0238420 | Msa1081650 | -0.802189 | 6.313893e-49 | -8.615850e-47 |
| Msa0238420 | Msa1098350 | -0.807016 | 6.208934e-50 | -8.615850e-47 |
| Msa0238420 | Msa1098470 | -0.815779 | 7.761451e-52 | -8.615850e-47 |
| Msa0238420 | Msa1117830 | -0.813850 | 2.076818e-51 | -8.615850e-47 |
| Msa0238420 | Msa1138480 | -0.803731 | 3.030348e-49 | -8.615850e-47 |
| Msa0238420 | Msa1138490 | -0.803080 | 4.133771e-49 | -8.615850e-47 |
| Msa0238420 | Msa1151970 | -0.836500 | 9.024065e-57 | -8.615850e-47 |
| Msa0238420 | Msa1161520 | -0.808071 | 3.708849e-50 | -8.615850e-47 |
| Msa0238420 | Msa1171630 | 0.804870 | 1.755315e-49 | -8.615850e-47 |
| Msa0238420 | Msa1175850 | -0.808669 | 2.765026e-50 | -8.615850e-47 |
| Msa0238420 | Msa1181730 | -0.823741 | 1.176605e-53 | -8.615850e-47 |
| Msa0238420 | Msa1182400 | -0.854327 | 1.324876e-61 | -8.615850e-47 |
| Msa0238420 | Msa1182960 | -0.818642 | 1.762527e-52 | -8.615850e-47 |
| Msa0238420 | Msa1184640 | -0.809982 | 1.445293e-50 | -8.615850e-47 |
| Msa0238420 | Msa1188380 | -0.800686 | 1.282713e-48 | -8.615850e-47 |
| Msa0238420 | Msa1199750 | -0.843807 | 1.116314e-58 | -8.615850e-47 |
| Msa0238420 | Msa1203090 | -0.803556 | 3.294734e-49 | -8.615850e-47 |
| Msa0238420 | Msa1205520 | -0.804158 | 2.470101e-49 | -8.615850e-47 |
| Msa0238420 | Msa1207880 | 0.816404 | 5.627963e-52 | -8.615850e-47 |
| Msa0238420 | Msa1208250 | -0.806330 | 8.670073e-50 | -8.615850e-47 |
| Msa0238420 | Msa1229880 | -0.803519 | 3.354466e-49 | -8.615850e-47 |
| Msa0238420 | Msa1230190 | -0.854628 | 1.084179e-61 | -8.615850e-47 |
| Msa0238420 | Msa1235940 | -0.812555 | 3.997810e-51 | -8.615850e-47 |
| Msa0238420 | Msa1239870 | 0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0238420 | Msa1247720 | -0.823397 | 1.415950e-53 | -8.615850e-47 |
| Msa0238420 | Msa1247860 | -0.808195 | 3.488914e-50 | -8.615850e-47 |
| Msa0238420 | Msa1251500 | 0.805176 | 1.514431e-49 | -8.615850e-47 |
| Msa0238420 | Msa1257170 | 0.800887 | 1.166966e-48 | -8.615850e-47 |
| Msa0238420 | Msa1258200 | -0.814377 | 1.589146e-51 | -8.615850e-47 |
| Msa0238420 | Msa1272770 | -0.833993 | 3.874020e-56 | -8.615850e-47 |
| Msa0238420 | Msa1277580 | -0.806548 | 7.798786e-50 | -8.615850e-47 |
| Msa0238420 | Msa1279310 | -0.810666 | 1.028841e-50 | -8.615850e-47 |
| Msa0238420 | Msa1279320 | -0.845217 | 4.662127e-59 | -8.615850e-47 |
| Msa0238420 | Msa1279330 | -0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0238420 | Msa1286950 | -0.808590 | 2.873768e-50 | -8.615850e-47 |
| Msa0238420 | Msa1287640 | -0.802117 | 6.532274e-49 | -8.615850e-47 |
| Msa0238420 | Msa1297540 | -0.806632 | 7.487759e-50 | -8.615850e-47 |
| Msa0238420 | Msa1319230 | -0.802639 | 5.100579e-49 | -8.615850e-47 |
| Msa0238420 | Msa1319440 | -0.858717 | 6.802657e-63 | -8.615850e-47 |
| Msa0238420 | Msa1327690 | -0.801983 | 6.959411e-49 | -8.615850e-47 |
| Msa0238420 | Msa1328600 | -0.839539 | 1.492025e-57 | -8.615850e-47 |
| Msa0238420 | Msa1331730 | -0.810250 | 1.265372e-50 | -8.615850e-47 |
| Msa0238420 | Msa1351370 | -0.805171 | 1.518466e-49 | -8.615850e-47 |
| Msa0238420 | Msa1356730 | -0.813120 | 3.006702e-51 | -8.615850e-47 |
| Msa0238420 | Msa1357380 | -0.805786 | 1.128002e-49 | -8.615850e-47 |
| Msa0238420 | Msa1366700 | -0.800851 | 1.187090e-48 | -8.615850e-47 |
| Msa0238420 | Msa1368800 | -0.831058 | 2.069715e-55 | -8.615850e-47 |
| Msa0238420 | Msa1378840 | -0.834752 | 2.499732e-56 | -8.615850e-47 |
| Msa0238420 | Msa1384980 | -0.823478 | 1.355375e-53 | -8.615850e-47 |
| Msa0238420 | Msa1386020 | -0.828360 | 9.388733e-55 | -8.615850e-47 |
| Msa0238420 | Msa1391600 | -0.820010 | 8.595412e-53 | -8.615850e-47 |
| Msa0238420 | Msa1395700 | -0.843813 | 1.111980e-58 | -8.615850e-47 |
| Msa0238420 | Msa1402000 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa0238420 | Msa1432250 | -0.852200 | 5.394942e-61 | -8.615850e-47 |
| Msa0238420 | Msa1432350 | -0.807913 | 4.006755e-50 | -8.615850e-47 |
| Msa0238420 | Msa1433380 | -0.826742 | 2.296212e-54 | -8.615850e-47 |
| Msa0238420 | Msa1443440 | -0.831600 | 1.522585e-55 | -8.615850e-47 |
| Msa0238420 | Msa1450850 | -0.836399 | 9.573572e-57 | -8.615850e-47 |
| Msa0238420 | Msa1451780 | -0.820485 | 6.690558e-53 | -8.615850e-47 |
| Msa0238420 | Msa1459170 | -0.818162 | 2.262938e-52 | -8.615850e-47 |
| Msa0238420 | Msa1459630 | -0.815856 | 7.460156e-52 | -8.615850e-47 |
| Msa0238420 | Msa1463500 | -0.804063 | 2.586224e-49 | -8.615850e-47 |
| Msa0238420 | Msa1463890 | -0.809216 | 2.111209e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238420 | MtrunA17_Chr2g0288251 | 99.501 | 401 | 2 | 0 | 1 | 401 | 1 | 401 | 0.0 | 822 |
| Msa0238420 | MtrunA17_Chr4g0074711 | 78.649 | 370 | 61 | 12 | 41 | 401 | 51 | 411 | 0.0 | 552 |
| Msa0238420 | MtrunA17_Chr3g0133651 | 57.143 | 336 | 138 | 4 | 54 | 389 | 87 | 416 | 1.29e-127 | 374 |
| Msa0238420 | MtrunA17_Chr2g0328791 | 55.080 | 374 | 123 | 6 | 51 | 393 | 6 | 365 | 2.15e-127 | 374 |
| Msa0238420 | MtrunA17_Chr1g0153871 | 52.195 | 410 | 168 | 9 | 9 | 393 | 27 | 433 | 3.91e-127 | 373 |
| Msa0238420 | MtrunA17_Chr4g0045221 | 59.211 | 304 | 105 | 4 | 57 | 342 | 113 | 415 | 1.48e-124 | 367 |
| Msa0238420 | MtrunA17_Chr3g0139111 | 32.803 | 314 | 179 | 8 | 49 | 343 | 51 | 351 | 1.64e-41 | 151 |
| Msa0238420 | MtrunA17_Chr3g0139111 | 22.907 | 227 | 148 | 4 | 150 | 370 | 55 | 260 | 2.37e-12 | 68.2 |
| Msa0238420 | MtrunA17_Chr4g0070231 | 30.769 | 351 | 201 | 11 | 18 | 343 | 3 | 336 | 4.74e-38 | 141 |
| Msa0238420 | MtrunA17_Chr8g0344491 | 30.275 | 327 | 193 | 11 | 28 | 335 | 35 | 345 | 1.50e-33 | 129 |
| Msa0238420 | MtrunA17_Chr4g0044541 | 29.658 | 263 | 158 | 8 | 61 | 318 | 35 | 275 | 9.36e-29 | 118 |
| Msa0238420 | MtrunA17_Chr4g0044541 | 26.056 | 284 | 198 | 8 | 62 | 340 | 124 | 400 | 1.66e-26 | 111 |
| Msa0238420 | MtrunA17_Chr1g0153181 | 28.897 | 263 | 160 | 9 | 61 | 318 | 33 | 273 | 1.29e-25 | 108 |
| Msa0238420 | MtrunA17_Chr1g0153181 | 25.564 | 266 | 185 | 9 | 62 | 321 | 122 | 380 | 4.42e-20 | 92.4 |
| Msa0238420 | MtrunA17_Chr7g0265341 | 24.068 | 295 | 191 | 7 | 49 | 338 | 65 | 331 | 6.97e-25 | 107 |
| Msa0238420 | MtrunA17_Chr7g0265341 | 25.352 | 284 | 194 | 8 | 62 | 337 | 160 | 433 | 2.22e-19 | 90.5 |
| Msa0238420 | MtrunA17_Chr3g0134141 | 28.517 | 263 | 161 | 8 | 61 | 318 | 25 | 265 | 4.41e-24 | 104 |
| Msa0238420 | MtrunA17_Chr3g0134141 | 26.277 | 274 | 178 | 8 | 62 | 324 | 114 | 374 | 1.70e-20 | 93.6 |
| Msa0238420 | MtrunA17_Chr3g0134141 | 29.545 | 176 | 101 | 5 | 156 | 326 | 25 | 182 | 2.67e-13 | 71.6 |
| Msa0238420 | MtrunA17_Chr1g0179701 | 24.510 | 306 | 199 | 7 | 24 | 324 | 31 | 309 | 7.83e-24 | 103 |
| Msa0238420 | MtrunA17_Chr1g0179701 | 24.013 | 304 | 210 | 9 | 40 | 338 | 135 | 422 | 8.79e-15 | 76.3 |
| Msa0238420 | MtrunA17_Chr1g0201151 | 28.417 | 278 | 171 | 10 | 61 | 333 | 31 | 285 | 4.68e-22 | 98.6 |
| Msa0238420 | MtrunA17_Chr1g0201151 | 21.914 | 324 | 225 | 10 | 24 | 340 | 95 | 397 | 1.92e-16 | 81.3 |
| Msa0238420 | MtrunA17_Chr6g0465751 | 26.217 | 267 | 166 | 8 | 58 | 319 | 23 | 263 | 1.17e-21 | 97.1 |
| Msa0238420 | MtrunA17_Chr6g0465751 | 22.772 | 303 | 215 | 6 | 62 | 357 | 115 | 405 | 3.18e-19 | 89.7 |
| Msa0238420 | MtrunA17_Chr6g0466501 | 26.592 | 267 | 165 | 9 | 58 | 319 | 23 | 263 | 5.90e-21 | 95.1 |
| Msa0238420 | MtrunA17_Chr6g0466501 | 23.077 | 364 | 236 | 10 | 62 | 397 | 115 | 462 | 2.11e-18 | 87.4 |
| Msa0238420 | MtrunA17_Chr1g0177101 | 30.348 | 201 | 128 | 6 | 52 | 244 | 100 | 296 | 1.04e-20 | 92.0 |
| Msa0238420 | MtrunA17_Chr3g0116631 | 31.285 | 179 | 114 | 4 | 62 | 235 | 111 | 285 | 2.47e-19 | 87.4 |
| Msa0238420 | MtrunA17_Chr3g0116631 | 27.230 | 213 | 126 | 6 | 135 | 329 | 79 | 280 | 3.74e-12 | 66.6 |
| Msa0238420 | MtrunA17_Chr0c09g0493511 | 23.934 | 305 | 209 | 10 | 62 | 357 | 33 | 323 | 7.01e-19 | 88.6 |
| Msa0238420 | MtrunA17_Chr6g0465691 | 23.099 | 342 | 229 | 9 | 62 | 385 | 33 | 358 | 1.56e-18 | 87.4 |
| Msa0238420 | MtrunA17_Chr7g0267571 | 27.451 | 204 | 128 | 7 | 51 | 243 | 100 | 294 | 2.81e-16 | 79.3 |
| Msa0238420 | MtrunA17_Chr3g0110211 | 27.957 | 186 | 126 | 3 | 51 | 236 | 16 | 193 | 4.79e-16 | 79.0 |
| Msa0238420 | MtrunA17_Chr3g0110211 | 25.946 | 185 | 111 | 5 | 154 | 331 | 24 | 189 | 1.55e-12 | 68.6 |
| Msa0238420 | MtrunA17_Chr4g0058151 | 28.495 | 186 | 107 | 4 | 62 | 235 | 124 | 295 | 5.05e-16 | 78.2 |
| Msa0238420 | MtrunA17_Chr4g0058151 | 27.513 | 189 | 119 | 5 | 146 | 328 | 113 | 289 | 1.35e-12 | 68.2 |
| Msa0238420 | MtrunA17_Chr1g0181111 | 29.688 | 192 | 115 | 4 | 62 | 235 | 86 | 275 | 5.44e-16 | 77.8 |
| Msa0238420 | MtrunA17_Chr1g0181111 | 30.052 | 193 | 115 | 6 | 153 | 329 | 82 | 270 | 1.14e-13 | 70.9 |
| Msa0238420 | MtrunA17_Chr6g0465631 | 20.629 | 286 | 211 | 8 | 62 | 340 | 17 | 293 | 2.07e-15 | 77.8 |
| Msa0238420 | MtrunA17_Chr6g0466451 | 20.132 | 303 | 226 | 8 | 62 | 357 | 17 | 310 | 2.24e-15 | 77.8 |
| Msa0238420 | MtrunA17_Chr3g0096561 | 26.087 | 253 | 142 | 9 | 153 | 390 | 196 | 418 | 3.95e-14 | 74.3 |
| Msa0238420 | MtrunA17_Chr3g0131631 | 25.962 | 208 | 124 | 6 | 141 | 347 | 263 | 441 | 1.26e-13 | 72.8 |
| Msa0238420 | MtrunA17_Chr7g0266451 | 21.053 | 285 | 187 | 8 | 62 | 339 | 103 | 356 | 1.83e-13 | 71.6 |
| Msa0238420 | MtrunA17_Chr8g0372111 | 22.297 | 296 | 193 | 8 | 62 | 347 | 420 | 688 | 2.68e-13 | 72.0 |
| Msa0238420 | MtrunA17_Chr7g0276201 | 21.528 | 288 | 184 | 10 | 62 | 338 | 106 | 362 | 2.83e-13 | 71.2 |
| Msa0238420 | MtrunA17_Chr8g0335981 | 23.420 | 269 | 172 | 10 | 62 | 322 | 217 | 459 | 2.79e-12 | 68.6 |
| Msa0238420 | MtrunA17_Chr7g0217261 | 23.226 | 310 | 184 | 10 | 83 | 370 | 372 | 649 | 3.17e-12 | 68.2 |
| Msa0238420 | MtrunA17_Chr2g0304041 | 25.967 | 181 | 112 | 5 | 153 | 332 | 194 | 353 | 3.85e-12 | 68.2 |
| Msa0238420 | MtrunA17_Chr1g0190211 | 39.474 | 76 | 45 | 1 | 154 | 229 | 131 | 205 | 1.25e-11 | 64.3 |
| Msa0238420 | MtrunA17_Chr1g0212611 | 27.136 | 199 | 137 | 5 | 57 | 253 | 217 | 409 | 2.46e-11 | 65.1 |
| Msa0238420 | MtrunA17_Chr8g0375101 | 25.338 | 296 | 170 | 10 | 58 | 314 | 2 | 285 | 5.00e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238420 | AT1G11650.2 | 65.205 | 342 | 103 | 6 | 38 | 377 | 39 | 366 | 2.30e-156 | 447 |
| Msa0238420 | AT5G54900.1 | 64.759 | 332 | 102 | 7 | 51 | 378 | 51 | 371 | 9.40e-145 | 417 |
| Msa0238420 | AT4G27000.1 | 64.205 | 352 | 106 | 5 | 38 | 376 | 45 | 389 | 3.24e-144 | 416 |
| Msa0238420 | AT1G11650.1 | 67.159 | 271 | 84 | 3 | 38 | 306 | 39 | 306 | 1.85e-132 | 382 |
| Msa0238420 | AT3G19130.1 | 58.710 | 310 | 110 | 5 | 55 | 348 | 103 | 410 | 8.87e-122 | 360 |
| Msa0238420 | AT1G49600.1 | 55.132 | 341 | 127 | 6 | 50 | 379 | 109 | 434 | 1.17e-120 | 357 |
| Msa0238420 | AT1G49600.3 | 58.140 | 301 | 116 | 3 | 50 | 342 | 109 | 407 | 6.53e-119 | 353 |
| Msa0238420 | AT1G49600.2 | 58.140 | 301 | 116 | 3 | 50 | 342 | 109 | 407 | 6.53e-119 | 353 |
| Msa0238420 | AT1G47490.1 | 50.758 | 396 | 177 | 8 | 4 | 394 | 48 | 430 | 1.02e-117 | 349 |
| Msa0238420 | AT5G19350.2 | 53.279 | 366 | 135 | 8 | 48 | 393 | 8 | 357 | 1.79e-117 | 348 |
| Msa0238420 | AT5G19350.1 | 52.128 | 376 | 137 | 8 | 48 | 399 | 8 | 364 | 7.83e-117 | 347 |
| Msa0238420 | AT1G47500.1 | 53.782 | 357 | 146 | 8 | 45 | 394 | 88 | 432 | 2.32e-115 | 343 |
| Msa0238420 | AT1G47490.2 | 50.746 | 268 | 119 | 6 | 4 | 265 | 48 | 308 | 5.62e-77 | 241 |
| Msa0238420 | AT1G47490.2 | 25.758 | 198 | 124 | 5 | 141 | 328 | 87 | 271 | 1.47e-12 | 68.6 |
| Msa0238420 | AT1G47500.2 | 54.867 | 226 | 92 | 5 | 45 | 264 | 88 | 309 | 1.85e-73 | 232 |
| Msa0238420 | AT1G47500.2 | 26.786 | 224 | 138 | 7 | 141 | 354 | 89 | 296 | 5.48e-12 | 66.6 |
| Msa0238420 | AT1G54080.1 | 32.432 | 333 | 190 | 11 | 22 | 335 | 30 | 346 | 5.64e-40 | 147 |
| Msa0238420 | AT1G54080.2 | 32.047 | 337 | 190 | 12 | 22 | 335 | 30 | 350 | 3.35e-38 | 143 |
| Msa0238420 | AT1G17370.2 | 30.556 | 324 | 193 | 10 | 28 | 335 | 27 | 334 | 2.97e-35 | 134 |
| Msa0238420 | AT3G14100.1 | 30.887 | 327 | 191 | 11 | 28 | 335 | 32 | 342 | 1.02e-34 | 133 |
| Msa0238420 | AT1G17370.1 | 30.275 | 327 | 193 | 11 | 28 | 335 | 27 | 337 | 2.53e-34 | 132 |
| Msa0238420 | AT4G34110.1 | 27.018 | 285 | 181 | 7 | 61 | 340 | 37 | 299 | 9.80e-28 | 115 |
| Msa0238420 | AT4G34110.1 | 25.704 | 284 | 199 | 8 | 62 | 340 | 126 | 402 | 5.19e-25 | 107 |
| Msa0238420 | AT2G23350.1 | 27.875 | 287 | 195 | 8 | 59 | 340 | 133 | 412 | 1.92e-27 | 115 |
| Msa0238420 | AT2G23350.1 | 28.137 | 263 | 162 | 8 | 61 | 318 | 47 | 287 | 6.94e-24 | 104 |
| Msa0238420 | AT1G22760.1 | 28.446 | 341 | 202 | 13 | 7 | 340 | 8 | 313 | 1.47e-25 | 109 |
| Msa0238420 | AT1G22760.1 | 22.997 | 287 | 205 | 9 | 62 | 340 | 138 | 416 | 7.29e-19 | 89.4 |
| Msa0238420 | AT1G49760.1 | 26.667 | 285 | 182 | 7 | 61 | 340 | 46 | 308 | 7.38e-25 | 107 |
| Msa0238420 | AT1G49760.1 | 27.612 | 268 | 182 | 7 | 59 | 321 | 132 | 392 | 3.54e-22 | 99.4 |
| Msa0238420 | AT1G49760.1 | 27.228 | 202 | 121 | 6 | 51 | 235 | 213 | 405 | 7.47e-14 | 73.9 |
| Msa0238420 | AT1G49760.2 | 26.667 | 285 | 182 | 7 | 61 | 340 | 46 | 308 | 7.38e-25 | 107 |
| Msa0238420 | AT1G49760.2 | 27.612 | 268 | 182 | 7 | 59 | 321 | 132 | 392 | 3.54e-22 | 99.4 |
| Msa0238420 | AT1G49760.2 | 27.228 | 202 | 121 | 6 | 51 | 235 | 213 | 405 | 7.47e-14 | 73.9 |
| Msa0238420 | AT1G71770.1 | 26.316 | 285 | 184 | 8 | 61 | 340 | 60 | 323 | 4.50e-24 | 105 |
| Msa0238420 | AT1G71770.1 | 24.390 | 287 | 201 | 9 | 62 | 340 | 148 | 426 | 2.35e-21 | 96.7 |
| Msa0238420 | AT1G71770.2 | 26.316 | 285 | 184 | 8 | 61 | 340 | 60 | 323 | 4.50e-24 | 105 |
| Msa0238420 | AT1G71770.2 | 24.390 | 287 | 201 | 9 | 62 | 340 | 148 | 426 | 2.35e-21 | 96.7 |
| Msa0238420 | AT2G36660.1 | 26.224 | 286 | 180 | 10 | 61 | 341 | 25 | 284 | 1.11e-23 | 103 |
| Msa0238420 | AT2G36660.1 | 22.977 | 309 | 213 | 11 | 40 | 340 | 97 | 388 | 6.35e-14 | 73.9 |
| Msa0238420 | AT3G16380.1 | 27.491 | 291 | 187 | 10 | 62 | 341 | 114 | 391 | 2.55e-21 | 96.3 |
| Msa0238420 | AT3G16380.1 | 26.568 | 271 | 174 | 7 | 61 | 326 | 22 | 272 | 2.31e-19 | 90.5 |
| Msa0238420 | AT1G34140.1 | 24.101 | 278 | 195 | 8 | 62 | 333 | 33 | 300 | 4.50e-18 | 85.9 |
| Msa0238420 | AT3G52380.1 | 28.079 | 203 | 130 | 6 | 54 | 245 | 111 | 308 | 2.67e-17 | 82.8 |
| Msa0238420 | AT5G50250.1 | 31.053 | 190 | 118 | 5 | 48 | 235 | 108 | 286 | 9.20e-17 | 80.5 |
| Msa0238420 | AT4G24770.1 | 30.435 | 184 | 110 | 4 | 62 | 237 | 152 | 325 | 1.21e-16 | 80.9 |
| Msa0238420 | AT4G24770.1 | 26.289 | 194 | 125 | 4 | 141 | 328 | 136 | 317 | 2.67e-11 | 64.7 |
| Msa0238420 | AT4G24770.2 | 30.435 | 184 | 110 | 4 | 62 | 237 | 152 | 325 | 1.21e-16 | 80.9 |
| Msa0238420 | AT4G24770.2 | 26.289 | 194 | 125 | 4 | 141 | 328 | 136 | 317 | 2.67e-11 | 64.7 |
| Msa0238420 | AT2G37220.1 | 29.439 | 214 | 126 | 5 | 44 | 237 | 77 | 285 | 1.33e-14 | 74.3 |
| Msa0238420 | AT2G37220.1 | 28.947 | 190 | 120 | 5 | 154 | 329 | 90 | 278 | 9.79e-13 | 68.6 |
| Msa0238420 | AT2G18510.1 | 26.882 | 186 | 128 | 3 | 51 | 236 | 16 | 193 | 1.64e-14 | 74.7 |
| Msa0238420 | AT2G44710.2 | 24.908 | 273 | 163 | 11 | 62 | 322 | 216 | 458 | 1.12e-13 | 73.6 |
| Msa0238420 | AT2G44710.1 | 24.908 | 273 | 163 | 11 | 62 | 322 | 216 | 458 | 1.12e-13 | 73.6 |
| Msa0238420 | AT4G13850.4 | 41.772 | 79 | 45 | 1 | 157 | 235 | 37 | 114 | 1.13e-13 | 68.2 |
| Msa0238420 | AT2G44710.4 | 25.275 | 273 | 162 | 11 | 62 | 322 | 131 | 373 | 1.39e-13 | 73.2 |
| Msa0238420 | AT3G13224.3 | 28.643 | 199 | 135 | 4 | 59 | 257 | 9 | 200 | 1.83e-13 | 71.6 |
| Msa0238420 | AT3G13224.3 | 24.121 | 199 | 128 | 6 | 157 | 349 | 12 | 193 | 2.45e-11 | 65.1 |
| Msa0238420 | AT4G13850.3 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 1.91e-13 | 67.8 |
| Msa0238420 | AT4G13850.2 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 2.34e-13 | 67.8 |
| Msa0238420 | AT4G13850.1 | 43.373 | 83 | 45 | 2 | 157 | 239 | 37 | 117 | 2.62e-13 | 67.8 |
| Msa0238420 | AT4G14300.1 | 30.508 | 177 | 109 | 5 | 157 | 324 | 8 | 179 | 3.41e-13 | 71.2 |
| Msa0238420 | AT4G14300.2 | 30.508 | 177 | 109 | 5 | 157 | 324 | 8 | 179 | 3.41e-13 | 71.2 |
| Msa0238420 | AT1G60000.1 | 29.545 | 176 | 116 | 4 | 62 | 235 | 87 | 256 | 3.58e-13 | 69.7 |
| Msa0238420 | AT3G13224.2 | 28.571 | 196 | 133 | 4 | 62 | 257 | 21 | 209 | 7.90e-13 | 69.7 |
| Msa0238420 | AT3G13224.2 | 24.121 | 199 | 128 | 6 | 157 | 349 | 21 | 202 | 1.46e-11 | 65.9 |
| Msa0238420 | AT2G33410.1 | 31.613 | 155 | 96 | 2 | 62 | 207 | 8 | 161 | 3.29e-12 | 68.2 |
| Msa0238420 | AT2G42890.3 | 26.866 | 201 | 111 | 6 | 141 | 332 | 169 | 342 | 6.59e-12 | 67.8 |
| Msa0238420 | AT2G42890.2 | 26.866 | 201 | 111 | 6 | 141 | 332 | 169 | 342 | 6.59e-12 | 67.8 |
| Msa0238420 | AT2G42890.1 | 26.866 | 201 | 111 | 6 | 141 | 332 | 182 | 355 | 6.63e-12 | 67.8 |
| Msa0238420 | AT5G47620.1 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.73e-12 | 67.4 |
| Msa0238420 | AT5G47620.2 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.73e-12 | 67.4 |
| Msa0238420 | AT5G47620.5 | 28.477 | 151 | 102 | 3 | 62 | 207 | 8 | 157 | 6.73e-12 | 67.4 |
| Msa0238420 | AT5G40490.1 | 24.378 | 201 | 144 | 4 | 50 | 250 | 32 | 224 | 7.32e-12 | 67.0 |
| Msa0238420 | AT3G04500.1 | 39.474 | 76 | 45 | 1 | 154 | 229 | 136 | 210 | 7.87e-12 | 65.5 |
| Msa0238420 | AT4G00830.2 | 20.608 | 296 | 200 | 9 | 62 | 351 | 118 | 384 | 1.49e-11 | 66.2 |
| Msa0238420 | AT4G00830.1 | 20.608 | 296 | 200 | 9 | 62 | 351 | 118 | 384 | 1.49e-11 | 66.2 |
| Msa0238420 | AT4G00830.6 | 20.608 | 296 | 200 | 9 | 62 | 351 | 118 | 384 | 1.49e-11 | 66.2 |
| Msa0238420 | AT1G58470.2 | 25.683 | 183 | 112 | 6 | 151 | 314 | 2 | 179 | 1.99e-11 | 65.5 |
| Msa0238420 | AT1G58470.1 | 25.683 | 183 | 112 | 6 | 151 | 314 | 2 | 179 | 1.99e-11 | 65.5 |
| Msa0238420 | AT1G48920.1 | 26.230 | 183 | 113 | 5 | 46 | 210 | 281 | 459 | 3.68e-11 | 65.1 |
| Msa0238420 | AT3G52150.2 | 26.923 | 182 | 114 | 6 | 157 | 328 | 78 | 250 | 3.84e-11 | 63.5 |
| Msa0238420 | AT3G52150.1 | 26.923 | 182 | 114 | 6 | 157 | 328 | 78 | 250 | 3.84e-11 | 63.5 |
| Msa0238420 | AT4G00830.4 | 20.270 | 296 | 201 | 9 | 62 | 351 | 118 | 384 | 4.88e-11 | 64.7 |
| Msa0238420 | AT3G52660.3 | 19.932 | 296 | 194 | 7 | 62 | 345 | 94 | 358 | 6.97e-11 | 64.3 |
| Msa0238420 | AT3G52660.1 | 19.932 | 296 | 194 | 7 | 62 | 345 | 94 | 358 | 6.97e-11 | 64.3 |
| Msa0238420 | AT3G52660.2 | 19.932 | 296 | 194 | 7 | 62 | 345 | 94 | 358 | 6.97e-11 | 64.3 |
| Msa0238420 | AT2G16940.1 | 29.412 | 187 | 110 | 8 | 155 | 329 | 182 | 358 | 7.94e-11 | 64.3 |
| Msa0238420 | AT2G16940.5 | 29.412 | 187 | 110 | 8 | 155 | 329 | 41 | 217 | 8.77e-11 | 63.5 |
| Msa0238420 | AT2G16940.4 | 29.412 | 187 | 110 | 8 | 155 | 329 | 41 | 217 | 8.77e-11 | 63.5 |
| Msa0238420 | AT2G16940.2 | 29.412 | 187 | 110 | 8 | 155 | 329 | 231 | 407 | 9.22e-11 | 63.9 |
Find 161 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTACCTGTCCGAAAAT+TGG | 0.249363 | 2_2:-11855991 | None:intergenic |
| AGTACGCACAGTTGTGTTAT+TGG | 0.276538 | 2_2:-11855788 | None:intergenic |
| TCATCAGCAAGCAAATTTAA+AGG | 0.286109 | 2_2:-11856633 | None:intergenic |
| CTGAGGAGGCTGAGCGGATT+GGG | 0.307940 | 2_2:-11852281 | None:intergenic |
| GTTGTGATTGATAGGCTTAC+TGG | 0.319710 | 2_2:+11853653 | Msa0238420:CDS |
| GACAAAATGTTCGCCTTTCA+TGG | 0.326353 | 2_2:+11856157 | Msa0238420:CDS |
| CATGTACTAGTTCACCATAT+TGG | 0.331562 | 2_2:-11855934 | None:intergenic |
| TTCGGCTGAGTGGTGGCAGC+CGG | 0.333982 | 2_2:-11853803 | None:intergenic |
| CAGGGTGGTTATGAGAATTA+TGG | 0.335183 | 2_2:+11856355 | Msa0238420:CDS |
| TAGGCTTACTGGTAGGTCTA+AGG | 0.336332 | 2_2:+11853664 | Msa0238420:CDS |
| GTCAGAATTACAGATTGAAT+TGG | 0.341841 | 2_2:+11853483 | Msa0238420:CDS |
| CTGACCACCATTCGGCATAA+TGG | 0.348543 | 2_2:-11853465 | None:intergenic |
| ACTGGTAGGTCTAAGGGATA+TGG | 0.353776 | 2_2:+11853671 | Msa0238420:CDS |
| TATATTACCTGTTTGTTTGA+AGG | 0.362349 | 2_2:-11856189 | None:intergenic |
| CGCTGCTCCTCCTGCTGGAC+AGG | 0.368738 | 2_2:+11856381 | Msa0238420:CDS |
| ATGTACTAGTTCACCATATT+GGG | 0.373760 | 2_2:-11855933 | None:intergenic |
| GCTGAGGAGGCTGAGCGGAT+TGG | 0.376833 | 2_2:-11852282 | None:intergenic |
| CAATGTTACTAGCAATCAAA+TGG | 0.377030 | 2_2:-11856585 | None:intergenic |
| TAAAGGGATACAAGAGCCTT+TGG | 0.379996 | 2_2:-11856616 | None:intergenic |
| AGATGATCGTCGGTGACATT+TGG | 0.384630 | 2_2:-11855896 | None:intergenic |
| CCTGCTGCTGGTGGATATTA+CGG | 0.389047 | 2_2:+11856325 | Msa0238420:CDS |
| CAATGTGTATGGAAGTTATC+CGG | 0.390591 | 2_2:+11856408 | Msa0238420:CDS |
| GTACGCACAGTTGTGTTATT+GGG | 0.391359 | 2_2:-11855787 | None:intergenic |
| ACAGCAGCAACAACAGCAAA+TGG | 0.403314 | 2_2:+11856453 | Msa0238420:CDS |
| GGGCGAAAGTTGTGATTGAT+AGG | 0.409258 | 2_2:+11853645 | Msa0238420:CDS |
| CATCAGCAAGCAAATTTAAA+GGG | 0.415340 | 2_2:-11856632 | None:intergenic |
| AGAGAGAAAAGTTTGTGTCT+TGG | 0.422217 | 2_2:-11852072 | None:intergenic |
| TCAGCGCTGGCGGGCTGCTG+AGG | 0.435204 | 2_2:-11852298 | None:intergenic |
| GTTGTTGCTGCTGTGGGTGT+TGG | 0.436095 | 2_2:-11856444 | None:intergenic |
| TTCCATCAGGCAAGCGATGC+GGG | 0.436975 | 2_2:+11855963 | Msa0238420:CDS |
| ACTAGTCAATCAGAAGGTTA+TGG | 0.441162 | 2_2:+11853383 | Msa0238420:CDS |
| TTCTCGCTTTGTCCGCCACT+AGG | 0.442395 | 2_2:-11855760 | None:intergenic |
| AATGTTACTAGCAATCAAAT+GGG | 0.443839 | 2_2:-11856584 | None:intergenic |
| GGTATTGTTGCGGTGGTTGT+TGG | 0.444138 | 2_2:-11852192 | None:intergenic |
| GGTTACGCTGCTCCTCCTGC+TGG | 0.445011 | 2_2:+11856376 | Msa0238420:CDS |
| GGAGGAGCCATGCCGTGTCC+TGG | 0.452151 | 2_2:-11852160 | None:intergenic |
| GGAAGTTATCCGGGGTATCC+TGG | 0.454317 | 2_2:+11856418 | Msa0238420:CDS |
| TCAGAATTACAGATTGAATT+GGG | 0.455422 | 2_2:+11853484 | Msa0238420:CDS |
| GATTGGGCCGCCCACATAGC+TGG | 0.455583 | 2_2:-11852265 | None:intergenic |
| CCGTAATATCCACCAGCAGC+AGG | 0.455987 | 2_2:-11856325 | None:intergenic |
| CTGATGAGGTCCGTACTCTC+TGG | 0.456744 | 2_2:+11852317 | Msa0238420:CDS |
| AATTATCTATATACCTGCTT+CGG | 0.457585 | 2_2:+11852370 | Msa0238420:CDS |
| ATTTGCTGTTGTTGCTGCTG+TGG | 0.460723 | 2_2:-11856451 | None:intergenic |
| TGCTGTGGGTGTTGGTAACC+AGG | 0.462351 | 2_2:-11856436 | None:intergenic |
| AACGAGCCCTAAAAGTCTCC+TGG | 0.463019 | 2_2:-11853607 | None:intergenic |
| CGGCATGGCTCCTCCCACCA+TGG | 0.465301 | 2_2:+11852168 | Msa0238420:CDS |
| TTTGCTGTTGTTGCTGCTGT+GGG | 0.468115 | 2_2:-11856450 | None:intergenic |
| TGGTGAGAGGTCGTCGAGGC+AGG | 0.473256 | 2_2:+11853520 | Msa0238420:CDS |
| CATTTGATTGCTAGTAACAT+TGG | 0.473598 | 2_2:+11856586 | Msa0238420:three_prime_UTR |
| GGATCGGTGATTTGCAGTAC+TGG | 0.478598 | 2_2:+11852338 | Msa0238420:CDS |
| GCGCTGGCGGGCTGCTGAGG+AGG | 0.479390 | 2_2:-11852295 | None:intergenic |
| ACGCACTCCTTCAAACAAAC+AGG | 0.483228 | 2_2:+11856182 | Msa0238420:CDS |
| TCGGCTGAGTGGTGGCAGCC+GGG | 0.484975 | 2_2:-11853802 | None:intergenic |
| CAGCAGCAGGGTAACCACCC+TGG | 0.488709 | 2_2:-11856312 | None:intergenic |
| TCAACAAGACCCATGAGGAT+TGG | 0.489460 | 2_2:+11853761 | Msa0238420:CDS |
| CTAGCAATCAAATGGGGAAG+AGG | 0.493907 | 2_2:-11856577 | None:intergenic |
| CAGGGTGGTTACCCTGCTGC+TGG | 0.494399 | 2_2:+11856313 | Msa0238420:CDS |
| TAGCAATCAAATGGGGAAGA+GGG | 0.494794 | 2_2:-11856576 | None:intergenic |
| ACAAAATGTTCGCCTTTCAT+GGG | 0.496313 | 2_2:+11856158 | Msa0238420:CDS |
| TGGATATTACGGCTATGCCC+AGG | 0.498954 | 2_2:+11856336 | Msa0238420:CDS |
| CTGTAATTCTGACCACCATT+CGG | 0.501561 | 2_2:-11853473 | None:intergenic |
| CACAACAACCGCCAGCTATG+TGG | 0.504918 | 2_2:+11852254 | Msa0238420:CDS |
| TTTGTGAGATTTGCTGATGA+GGG | 0.506475 | 2_2:+11853695 | Msa0238420:CDS |
| GGTGGTTGTTGGCCCATGGT+GGG | 0.509060 | 2_2:-11852181 | None:intergenic |
| TGTTACTGATTACCTTCTCC+AGG | 0.509993 | 2_2:+11853589 | Msa0238420:CDS |
| CATCAGGAGCTGTGCAGAAG+AGG | 0.510016 | 2_2:+11856101 | Msa0238420:intron |
| TCTCGCTTTGTCCGCCACTA+GGG | 0.510759 | 2_2:-11855759 | None:intergenic |
| GCAGCCCGCCAGCGCTGATG+AGG | 0.511476 | 2_2:+11852303 | Msa0238420:CDS |
| CCTGGTTGCATCATCTCTCT+CGG | 0.516245 | 2_2:-11852142 | None:intergenic |
| CCCTAAAAGTCTCCTGGAGA+AGG | 0.518946 | 2_2:-11853601 | None:intergenic |
| CTCGCCGGTGTTACCGAAGC+AGG | 0.520914 | 2_2:-11852383 | None:intergenic |
| GGATAACTTCCATACACATT+GGG | 0.521577 | 2_2:-11856406 | None:intergenic |
| AATGTGTATGGAAGTTATCC+GGG | 0.521666 | 2_2:+11856409 | Msa0238420:CDS |
| CGGATAACTTCCATACACAT+TGG | 0.523263 | 2_2:-11856407 | None:intergenic |
| GGACAGGATCCCAATGTGTA+TGG | 0.524626 | 2_2:+11856397 | Msa0238420:CDS |
| GCTGCTGTGGTGGTGGCTGT+TGG | 0.525112 | 2_2:-11852213 | None:intergenic |
| CGGTGGTTGTTGGCCCATGG+TGG | 0.525587 | 2_2:-11852182 | None:intergenic |
| GCTCGTTATAACTCTGTGAA+GGG | 0.526741 | 2_2:+11853623 | Msa0238420:CDS |
| TTGCGGTGGTTGTTGGCCCA+TGG | 0.528216 | 2_2:-11852185 | None:intergenic |
| GGTGGTTACCCTGCTGCTGG+TGG | 0.530682 | 2_2:+11856316 | Msa0238420:CDS |
| AATTGGGCAACTTTCAGTGC+TGG | 0.533382 | 2_2:+11853500 | Msa0238420:CDS |
| ACGTACGGCTGCTGTGGTGG+TGG | 0.533909 | 2_2:-11852220 | None:intergenic |
| AACCCGCATCGCTTGCCTGA+TGG | 0.535712 | 2_2:-11855965 | None:intergenic |
| AGCAATCAAATGGGGAAGAG+GGG | 0.536247 | 2_2:-11856575 | None:intergenic |
| CAGCAGCAACAACAGCAAAT+GGG | 0.536514 | 2_2:+11856454 | Msa0238420:CDS |
| AGGCTTACTGGTAGGTCTAA+GGG | 0.537077 | 2_2:+11853665 | Msa0238420:CDS |
| AGCAGCAGGGTAACCACCCT+GGG | 0.537307 | 2_2:-11856311 | None:intergenic |
| CACATAGCTGGCGGTTGTTG+TGG | 0.538231 | 2_2:-11852253 | None:intergenic |
| GTACATGTGAAGATTCCATC+AGG | 0.542172 | 2_2:+11855950 | Msa0238420:CDS |
| AAGGAGTGCGTCCCCATGAA+AGG | 0.543141 | 2_2:-11856170 | None:intergenic |
| ACGGACCTCATCAGCGCTGG+CGG | 0.545644 | 2_2:-11852308 | None:intergenic |
| AGGTCGTCGAGGCAGGATGA+TGG | 0.546691 | 2_2:+11853527 | Msa0238420:CDS |
| GGCTCGTTATAACTCTGTGA+AGG | 0.546701 | 2_2:+11853622 | Msa0238420:CDS |
| GGTTGTTGGCCCATGGTGGG+AGG | 0.549182 | 2_2:-11852178 | None:intergenic |
| CGGACCTCATCAGCGCTGGC+GGG | 0.550273 | 2_2:-11852307 | None:intergenic |
| ACATTGGGATCCTGTCCAGC+AGG | 0.553089 | 2_2:-11856391 | None:intergenic |
| AGTGGCAGGTCCAATCCTCA+TGG | 0.559052 | 2_2:-11853771 | None:intergenic |
| GGCATGGCTCCTCCCACCAT+GGG | 0.562530 | 2_2:+11852169 | Msa0238420:CDS |
| GCAGGGTAACCACCCTGGGT+TGG | 0.563661 | 2_2:-11856307 | None:intergenic |
| CGTAATATCCACCAGCAGCA+GGG | 0.575605 | 2_2:-11856324 | None:intergenic |
| TTGAACGGAACTTTATTGGG+TGG | 0.575973 | 2_2:+11856135 | Msa0238420:CDS |
| CGGTGATTTGCAGTACTGGA+TGG | 0.577072 | 2_2:+11852342 | Msa0238420:CDS |
| ACAACAACCGCCAGCTATGT+GGG | 0.578681 | 2_2:+11852255 | Msa0238420:CDS |
| GGGCTATGACTGAGATGCAA+GGG | 0.579569 | 2_2:+11853729 | Msa0238420:CDS |
| AATCACCGATCCAGAGAGTA+CGG | 0.579736 | 2_2:-11852327 | None:intergenic |
| CCGAGAGAGATGATGCAACC+AGG | 0.585288 | 2_2:+11852142 | Msa0238420:exon |
| AACTTGCCTCAGATGATCGT+CGG | 0.588898 | 2_2:-11855906 | None:intergenic |
| ATAATTCTCATAACCACCCT+GGG | 0.588906 | 2_2:-11856353 | None:intergenic |
| GGCTGTTGGTATTGTTGCGG+TGG | 0.589555 | 2_2:-11852199 | None:intergenic |
| AAGAATCCTTATTCCACGAA+GGG | 0.590268 | 2_2:-11856543 | None:intergenic |
| TGATTGATAGGCTTACTGGT+AGG | 0.591076 | 2_2:+11853657 | Msa0238420:CDS |
| CAACTTTCAGTGCTGGTGAG+AGG | 0.591642 | 2_2:+11853507 | Msa0238420:CDS |
| CTCGTTATAACTCTGTGAAG+GGG | 0.593138 | 2_2:+11853624 | Msa0238420:CDS |
| GGTGGCTGTTGGTATTGTTG+CGG | 0.594122 | 2_2:-11852202 | None:intergenic |
| AGTACGGACCTCATCAGCGC+TGG | 0.598621 | 2_2:-11852311 | None:intergenic |
| ATCATGACGTACGGCTGCTG+TGG | 0.603814 | 2_2:-11852226 | None:intergenic |
| GCAATCAAATGGGGAAGAGG+GGG | 0.607457 | 2_2:-11856574 | None:intergenic |
| CATAATTCTCATAACCACCC+TGG | 0.609101 | 2_2:-11856354 | None:intergenic |
| AAGCAAACTAGTCAATCAGA+AGG | 0.612741 | 2_2:+11853377 | Msa0238420:CDS |
| ATGACGTACGGCTGCTGTGG+TGG | 0.613890 | 2_2:-11852223 | None:intergenic |
| AGAGTGCTTCTGACATACAA+TGG | 0.615716 | 2_2:+11853440 | Msa0238420:CDS |
| GAGGTCCGTACTCTCTGGAT+CGG | 0.617179 | 2_2:+11852322 | Msa0238420:CDS |
| GGATATTACGGCTATGCCCA+GGG | 0.617872 | 2_2:+11856337 | Msa0238420:CDS |
| GCTGCCACCACTCAGCCGAA+AGG | 0.617922 | 2_2:+11853806 | Msa0238420:CDS |
| GTGGCAGGTCCAATCCTCAT+GGG | 0.618279 | 2_2:-11853770 | None:intergenic |
| ATAGCTGGCGGTTGTTGTGG+TGG | 0.618727 | 2_2:-11852250 | None:intergenic |
| CTGATGAGGGTGAACAGATG+AGG | 0.619017 | 2_2:+11853708 | Msa0238420:CDS |
| CAAAATGTTCGCCTTTCATG+GGG | 0.619064 | 2_2:+11856159 | Msa0238420:CDS |
| TCGTTATAACTCTGTGAAGG+GGG | 0.622931 | 2_2:+11853625 | Msa0238420:CDS |
| CAAACCTTTCGGCTGAGTGG+TGG | 0.624684 | 2_2:-11853810 | None:intergenic |
| AGACAAACCTTTCGGCTGAG+TGG | 0.627415 | 2_2:-11853813 | None:intergenic |
| AGGGCTATGACTGAGATGCA+AGG | 0.628733 | 2_2:+11853728 | Msa0238420:CDS |
| TAAGAATCCTTATTCCACGA+AGG | 0.629680 | 2_2:-11856544 | None:intergenic |
| GAGATGATGCAACCAGGACA+CGG | 0.629747 | 2_2:+11852148 | Msa0238420:exon |
| AGAAAGATATTATACCTCGC+CGG | 0.630596 | 2_2:-11852398 | None:intergenic |
| ATGTCACCGACGATCATCTG+AGG | 0.632855 | 2_2:+11855900 | Msa0238420:CDS |
| AATGGAACCATTATGCCGAA+TGG | 0.635772 | 2_2:+11853458 | Msa0238420:CDS |
| TATACCTGCTTCGGTAACAC+CGG | 0.640046 | 2_2:+11852379 | Msa0238420:CDS |
| TGTGGTGGCATCATGACGTA+CGG | 0.642490 | 2_2:-11852235 | None:intergenic |
| GATGCAACCAGGACACGGCA+TGG | 0.642660 | 2_2:+11852153 | Msa0238420:CDS |
| GGGCTGCTGAGGAGGCTGAG+CGG | 0.642669 | 2_2:-11852287 | None:intergenic |
| TTGGGATCCTGTCCAGCAGG+AGG | 0.643700 | 2_2:-11856388 | None:intergenic |
| GGAACCATTATGCCGAATGG+TGG | 0.645643 | 2_2:+11853461 | Msa0238420:CDS |
| ATTCCATCAGGCAAGCGATG+CGG | 0.646516 | 2_2:+11855962 | Msa0238420:CDS |
| GACTCAACAAGATCCAACCC+AGG | 0.647131 | 2_2:+11856294 | Msa0238420:intron |
| TGGGCCGCCCACATAGCTGG+CGG | 0.657827 | 2_2:-11852262 | None:intergenic |
| TGATGAGGGTGAACAGATGA+GGG | 0.661600 | 2_2:+11853709 | Msa0238420:CDS |
| GGCTATGACTGAGATGCAAG+GGG | 0.668121 | 2_2:+11853730 | Msa0238420:CDS |
| TGTTGGTAACCAGGATACCC+CGG | 0.677241 | 2_2:-11856427 | None:intergenic |
| TCCATCAAAACAGCTCACAA+AGG | 0.680663 | 2_2:-11856511 | None:intergenic |
| ACAACCGCCAGCTATGTGGG+CGG | 0.687665 | 2_2:+11852258 | Msa0238420:CDS |
| GTGCTGGTGAGAGGTCGTCG+AGG | 0.694460 | 2_2:+11853516 | Msa0238420:CDS |
| TTTGTTCAACAAGACCCATG+AGG | 0.696574 | 2_2:+11853756 | Msa0238420:CDS |
| ACTCAACAAGATCCAACCCA+GGG | 0.701733 | 2_2:+11856295 | Msa0238420:CDS |
| GCAGCTTCGTATAACCCTAG+TGG | 0.702417 | 2_2:+11855745 | Msa0238420:intron |
| GCTTCGTATAACCCTAGTGG+CGG | 0.705338 | 2_2:+11855748 | Msa0238420:intron |
| ATGTTACTAGCAATCAAATG+GGG | 0.706400 | 2_2:-11856583 | None:intergenic |
| ATGTGTATGGAAGTTATCCG+GGG | 0.708244 | 2_2:+11856410 | Msa0238420:CDS |
| CAACAAGATCCAACCCAGGG+TGG | 0.719050 | 2_2:+11856298 | Msa0238420:CDS |
| CTGCTTCGGTAACACCGGCG+AGG | 0.749783 | 2_2:+11852384 | Msa0238420:CDS |
| TATTACGGCTATGCCCAGGG+TGG | 0.766971 | 2_2:+11856340 | Msa0238420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTTTAATTTATAT+TGG | + | chr2_2:11855403-11855422 | Msa0238420:intron | 0.0% |
| !!! | ATTTTTTATTGATTGATTAT+TGG | + | chr2_2:11852484-11852503 | Msa0238420:intron | 10.0% |
| !!! | AATTTTCCTTTAAAAAAATT+GGG | + | chr2_2:11854069-11854088 | Msa0238420:intron | 10.0% |
| !!! | TAATTGTTTTTACTTTTTAA+AGG | + | chr2_2:11854720-11854739 | Msa0238420:intron | 10.0% |
| !!! | AAATTGGATTTTGTAATTTT+GGG | + | chr2_2:11852781-11852800 | Msa0238420:intron | 15.0% |
| !!! | CAATTTTCCTTTAAAAAAAT+TGG | + | chr2_2:11854068-11854087 | Msa0238420:intron | 15.0% |
| !!! | ATCCAATAATTTTTAAGTAA+AGG | + | chr2_2:11855019-11855038 | Msa0238420:intron | 15.0% |
| !!! | TGTATTGAATTTGATTTATA+TGG | + | chr2_2:11855370-11855389 | Msa0238420:intron | 15.0% |
| !!! | AGTGTTATTTTTTTATTTGA+TGG | + | chr2_2:11855477-11855496 | Msa0238420:intron | 15.0% |
| !! | ACTATTTATTTAATAACCAA+AGG | - | chr2_2:11855636-11855655 | None:intergenic | 15.0% |
| !!! | AAATTAGGGTGTTTTAATTT+TGG | + | chr2_2:11852636-11852655 | Msa0238420:intron | 20.0% |
| !!! | GAAATTAGGGTTTTTAATTT+TGG | + | chr2_2:11852684-11852703 | Msa0238420:intron | 20.0% |
| !! | TTTATCCTATTTGTGAAATT+AGG | + | chr2_2:11852718-11852737 | Msa0238420:intron | 20.0% |
| !! | TTATCCTATTTGTGAAATTA+GGG | + | chr2_2:11852719-11852738 | Msa0238420:intron | 20.0% |
| !!! | GAAATTAGGGTTTTTAATTT+TGG | + | chr2_2:11852684-11852703 | Msa0238420:intron | 20.0% |
| !!! | GAAATTGGATTTTGTAATTT+TGG | + | chr2_2:11852780-11852799 | Msa0238420:intron | 20.0% |
| !!! | TTTATTTTGTTAGTGAAATC+AGG | + | chr2_2:11852814-11852833 | Msa0238420:intron | 20.0% |
| !!! | TTATTTTGTTAGTGAAATCA+GGG | + | chr2_2:11852815-11852834 | Msa0238420:intron | 20.0% |
| !!! | AGCTGTTTTTAAAACTATAT+CGG | + | chr2_2:11853017-11853036 | Msa0238420:intron | 20.0% |
| !!! | TTTATTCTGTTTTTGAAAGT+AGG | + | chr2_2:11853203-11853222 | Msa0238420:intron | 20.0% |
| !!! | TTATTCTGTTTTTGAAAGTA+GGG | + | chr2_2:11853204-11853223 | Msa0238420:intron | 20.0% |
| !!! | TTTATGCTTTTCGTAAAATT+TGG | + | chr2_2:11853252-11853271 | Msa0238420:intron | 20.0% |
| !!! | TTATGCTTTTCGTAAAATTT+GGG | + | chr2_2:11853253-11853272 | Msa0238420:intron | 20.0% |
| !!! | AAATTTGGGTTTTGAAATTT+TGG | + | chr2_2:11853267-11853286 | Msa0238420:intron | 20.0% |
| !! | ATTATTCTGTTAGTGAAATT+TGG | + | chr2_2:11853305-11853324 | Msa0238420:intron | 20.0% |
| !! | TTATTCTGTTAGTGAAATTT+GGG | + | chr2_2:11853306-11853325 | Msa0238420:intron | 20.0% |
| !! | ATACACTACAAAAGTTAATT+TGG | - | chr2_2:11853970-11853989 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTATGATTCTTTT+CGG | + | chr2_2:11854003-11854022 | Msa0238420:intron | 20.0% |
| !!! | TTTTTTTAAAGGAAAATTGC+AGG | - | chr2_2:11854067-11854086 | None:intergenic | 20.0% |
| !!! | ATTTAGCCCAATTTTTTTAA+AGG | - | chr2_2:11854078-11854097 | None:intergenic | 20.0% |
| !! | TGAAATAAATAAACATTTGC+TGG | - | chr2_2:11854519-11854538 | None:intergenic | 20.0% |
| !!! | ATCTCAACATTTTTTTCTTA+TGG | - | chr2_2:11854558-11854577 | None:intergenic | 20.0% |
| !! | AAATATATGAGAAGAATAAG+AGG | - | chr2_2:11854593-11854612 | None:intergenic | 20.0% |
| !! | GTCCTTTACTTAAAAATTAT+TGG | - | chr2_2:11855024-11855043 | None:intergenic | 20.0% |
| !! | TTAAATTGATAGAAGAGTAA+AGG | + | chr2_2:11855100-11855119 | Msa0238420:intron | 20.0% |
| !!! | TCTTTCATTATTCTAAAACA+GGG | - | chr2_2:11855170-11855189 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTTGATGGTTTC+CGG | + | chr2_2:11855484-11855503 | Msa0238420:intron | 20.0% |
| !!! | TTTTCATTGTAGATTTTTGT+TGG | + | chr2_2:11855863-11855882 | Msa0238420:intron | 20.0% |
| !!! | ACGCTTCAAATTTTTTTATT+GGG | - | chr2_2:11856768-11856787 | None:intergenic | 20.0% |
| !!! | AACGCTTCAAATTTTTTTAT+TGG | - | chr2_2:11856769-11856788 | None:intergenic | 20.0% |
| ! | AATTATCTATATACCTGCTT+CGG | + | chr2_2:11852370-11852389 | Msa0238420:CDS | 25.0% |
| ! | TCTCTCTTAATTGTAGAATT+AGG | + | chr2_2:11852420-11852439 | Msa0238420:intron | 25.0% |
| ! | CTCTCTTAATTGTAGAATTA+GGG | + | chr2_2:11852421-11852440 | Msa0238420:intron | 25.0% |
| !! | TTGATTATTGGTGTAAGTTT+TGG | + | chr2_2:11852496-11852515 | Msa0238420:intron | 25.0% |
| ! | TAAAACACCCTAATTTCTTA+AGG | - | chr2_2:11852632-11852651 | None:intergenic | 25.0% |
| ! | TTTATCCTGTTTGTGAAATT+AGG | + | chr2_2:11852670-11852689 | Msa0238420:intron | 25.0% |
| ! | TTATCCTGTTTGTGAAATTA+GGG | + | chr2_2:11852671-11852690 | Msa0238420:intron | 25.0% |
| ! | AAAACCCTAATTTCACAAAT+AGG | - | chr2_2:11852726-11852745 | None:intergenic | 25.0% |
| !! | TTTTAGTCTGTTTGTGAAAT+TGG | + | chr2_2:11852765-11852784 | Msa0238420:intron | 25.0% |
| !! | TATTTTGTTAGTGAAATCAG+GGG | + | chr2_2:11852816-11852835 | Msa0238420:intron | 25.0% |
| !!! | CAATTTTCACAAGCTTTTTT+TGG | - | chr2_2:11853061-11853080 | None:intergenic | 25.0% |
| !!! | AAAGTAGGGTATTGTAATTT+TGG | + | chr2_2:11853218-11853237 | Msa0238420:intron | 25.0% |
| !!! | GTATTGTAATTTTGGTTTGT+AGG | + | chr2_2:11853226-11853245 | Msa0238420:intron | 25.0% |
| ! | TCAGAATTACAGATTGAATT+GGG | + | chr2_2:11853484-11853503 | Msa0238420:CDS | 25.0% |
| ! | TATATAAGAGACAAACCTTT+CGG | - | chr2_2:11853824-11853843 | None:intergenic | 25.0% |
| !! | ATGTTGGTTAGTTGAATTTA+AGG | + | chr2_2:11853935-11853954 | Msa0238420:intron | 25.0% |
| !! | AAAAGTTAATTTGGTACACA+AGG | - | chr2_2:11853961-11853980 | None:intergenic | 25.0% |
| ! | AAAATGCCGCAAAAATATAA+CGG | - | chr2_2:11854263-11854282 | None:intergenic | 25.0% |
| ! | AGAGTAAAAACTAAACCAAA+AGG | - | chr2_2:11854322-11854341 | None:intergenic | 25.0% |
| ! | AACCAATAGGAGTAAATTAA+AGG | - | chr2_2:11854405-11854424 | None:intergenic | 25.0% |
| ! | AGTTCTTAAGAAAAACCAAT+AGG | - | chr2_2:11854418-11854437 | None:intergenic | 25.0% |
| ! | AATGTAAATAAGATCTGCTT+TGG | - | chr2_2:11854476-11854495 | None:intergenic | 25.0% |
| !!! | AACATTTTTTTCTTATGGAC+GGG | - | chr2_2:11854553-11854572 | None:intergenic | 25.0% |
| !!! | CAACATTTTTTTCTTATGGA+CGG | - | chr2_2:11854554-11854573 | None:intergenic | 25.0% |
| !! | TCAAACATTTTCAGACTTAA+AGG | - | chr2_2:11854646-11854665 | None:intergenic | 25.0% |
| !! | AGTAAAGGTATATCCAAATA+AGG | + | chr2_2:11855115-11855134 | Msa0238420:intron | 25.0% |
| !!! | CTTTCATTATTCTAAAACAG+GGG | - | chr2_2:11855169-11855188 | None:intergenic | 25.0% |
| !!! | CTCTTTCATTATTCTAAAAC+AGG | - | chr2_2:11855171-11855190 | None:intergenic | 25.0% |
| !!! | CTGTTTTAGAATAATGAAAG+AGG | + | chr2_2:11855169-11855188 | Msa0238420:intron | 25.0% |
| !!! | AAGTGACTAATTTGATTTTC+TGG | + | chr2_2:11855216-11855235 | Msa0238420:intron | 25.0% |
| ! | CAAATTCAATACATAGTTGT+CGG | - | chr2_2:11855363-11855382 | None:intergenic | 25.0% |
| ! | TATATTACCTGTTTGTTTGA+AGG | - | chr2_2:11856192-11856211 | None:intergenic | 25.0% |
| ! | AATGTTACTAGCAATCAAAT+GGG | - | chr2_2:11856587-11856606 | None:intergenic | 25.0% |
| !!! | AATTAGGGCTTTATTTTGTG+TGG | + | chr2_2:11852436-11852455 | Msa0238420:intron | 30.0% |
| AAAACCCTAATTTCACAAAC+AGG | - | chr2_2:11852678-11852697 | None:intergenic | 30.0% | |
| !!! | GAAATCAGGGGTTTTAATTT+TGG | + | chr2_2:11852828-11852847 | Msa0238420:intron | 30.0% |
| AATAAGCAGTTTATCCAAAC+AGG | - | chr2_2:11852894-11852913 | None:intergenic | 30.0% | |
| TGTTAGAATTGGCATATTTG+AGG | - | chr2_2:11853144-11853163 | None:intergenic | 30.0% | |
| CAATTCTAACAGATCCTATT+GGG | + | chr2_2:11853153-11853172 | Msa0238420:intron | 30.0% | |
| GTCAGAATTACAGATTGAAT+TGG | + | chr2_2:11853483-11853502 | Msa0238420:CDS | 30.0% | |
| !!! | TACCATTTTTGTTGGTGATT+TGG | + | chr2_2:11853559-11853578 | Msa0238420:CDS | 30.0% |
| CTTACTAATATGTGTGATGT+TGG | + | chr2_2:11853919-11853938 | Msa0238420:intron | 30.0% | |
| AAATGCCGCAAAAATATAAC+GGG | - | chr2_2:11854262-11854281 | None:intergenic | 30.0% | |
| TGACAAGAACTTGAAAATGT+AGG | - | chr2_2:11854294-11854313 | None:intergenic | 30.0% | |
| ! | CTCCTTTAATTTACTCCTAT+TGG | + | chr2_2:11854400-11854419 | Msa0238420:intron | 30.0% |
| GAGGAACAAATAAGAATAAG+AGG | - | chr2_2:11854624-11854643 | None:intergenic | 30.0% | |
| ! | AACATTTTCAGACTTAAAGG+AGG | - | chr2_2:11854643-11854662 | None:intergenic | 30.0% |
| GATAGAGATGATCAATTTCA+TGG | + | chr2_2:11854674-11854693 | Msa0238420:intron | 30.0% | |
| ! | TGGTTTTTATCTGTGTGTAA+AGG | + | chr2_2:11854694-11854713 | Msa0238420:intron | 30.0% |
| AGATGAATTCAAACAGCTTA+TGG | - | chr2_2:11854764-11854783 | None:intergenic | 30.0% | |
| !!! | GTAGGGTTTTAGATAAAGAT+GGG | + | chr2_2:11854841-11854860 | Msa0238420:intron | 30.0% |
| !!! | TAGGGTTTTAGATAAAGATG+GGG | + | chr2_2:11854842-11854861 | Msa0238420:intron | 30.0% |
| ! | TTTCTTTTATATGACTGCCA+TGG | + | chr2_2:11854910-11854929 | Msa0238420:intron | 30.0% |
| TGTATCATTCGTATGATAGA+TGG | - | chr2_2:11854996-11855015 | None:intergenic | 30.0% | |
| GGCTAACATATAACCTTATT+TGG | - | chr2_2:11855131-11855150 | None:intergenic | 30.0% | |
| AAAATCACAAAGTGATACAC+AGG | - | chr2_2:11855269-11855288 | None:intergenic | 30.0% | |
| AGTTTGATGTGATGAATTTG+TGG | + | chr2_2:11855298-11855317 | Msa0238420:intron | 30.0% | |
| GTTTGATGTGATGAATTTGT+GGG | + | chr2_2:11855299-11855318 | Msa0238420:intron | 30.0% | |
| TCACAGCAAGCAAATATTTA+GGG | - | chr2_2:11855558-11855577 | None:intergenic | 30.0% | |
| TTCACAGCAAGCAAATATTT+AGG | - | chr2_2:11855559-11855578 | None:intergenic | 30.0% | |
| TAAATAGATAGTTGCACCTT+TGG | + | chr2_2:11855617-11855636 | Msa0238420:intron | 30.0% | |
| ATGTACTAGTTCACCATATT+GGG | - | chr2_2:11855936-11855955 | None:intergenic | 30.0% | |
| AATATTACCTGTCCGAAAAT+TGG | - | chr2_2:11855994-11856013 | None:intergenic | 30.0% | |
| !! | TGTTTTGAACGGAACTTTAT+TGG | + | chr2_2:11856131-11856150 | Msa0238420:CDS | 30.0% |
| !! | GTTTTGAACGGAACTTTATT+GGG | + | chr2_2:11856132-11856151 | Msa0238420:CDS | 30.0% |
| ATGTTACTAGCAATCAAATG+GGG | - | chr2_2:11856586-11856605 | None:intergenic | 30.0% | |
| CAATGTTACTAGCAATCAAA+TGG | - | chr2_2:11856588-11856607 | None:intergenic | 30.0% | |
| CATTTGATTGCTAGTAACAT+TGG | + | chr2_2:11856586-11856605 | Msa0238420:three_prime_UTR | 30.0% | |
| ! | TAACATTGGAGTTTTACCAA+AGG | + | chr2_2:11856600-11856619 | Msa0238420:three_prime_UTR | 30.0% |
| CATCAGCAAGCAAATTTAAA+GGG | - | chr2_2:11856635-11856654 | None:intergenic | 30.0% | |
| TCATCAGCAAGCAAATTTAA+AGG | - | chr2_2:11856636-11856655 | None:intergenic | 30.0% | |
| ! | CTTTAGATTTTTGACGACAT+TGG | + | chr2_2:11856665-11856684 | Msa0238420:three_prime_UTR | 30.0% |
| AGAGAGAAAAGTTTGTGTCT+TGG | - | chr2_2:11852075-11852094 | None:intergenic | 35.0% | |
| AGAAAGATATTATACCTCGC+CGG | - | chr2_2:11852401-11852420 | None:intergenic | 35.0% | |
| !!! | TGGTGTAAGTTTTGGTGTTA+AGG | + | chr2_2:11852504-11852523 | Msa0238420:intron | 35.0% |
| ! | ATTCACTCTGGTGCTAATTT+GGG | - | chr2_2:11852598-11852617 | None:intergenic | 35.0% |
| ACCTGAGACCTTAAGAAATT+AGG | + | chr2_2:11852621-11852640 | Msa0238420:intron | 35.0% | |
| CCTGAGACCTTAAGAAATTA+GGG | + | chr2_2:11852622-11852641 | Msa0238420:intron | 35.0% | |
| !!! | GGGGTTTTAATTTTGGTTTG+TGG | + | chr2_2:11852835-11852854 | Msa0238420:intron | 35.0% |
| CGCTCTTATCATATAAGCTA+CGG | + | chr2_2:11852930-11852949 | Msa0238420:intron | 35.0% | |
| GCTCTTATCATATAAGCTAC+GGG | + | chr2_2:11852931-11852950 | Msa0238420:intron | 35.0% | |
| CCAATAGGATCTGTTAGAAT+TGG | - | chr2_2:11853155-11853174 | None:intergenic | 35.0% | |
| CCAATTCTAACAGATCCTAT+TGG | + | chr2_2:11853152-11853171 | Msa0238420:intron | 35.0% | |
| TAACAGATCCTATTGGGATA+AGG | + | chr2_2:11853159-11853178 | Msa0238420:intron | 35.0% | |
| AAGCAAACTAGTCAATCAGA+AGG | + | chr2_2:11853377-11853396 | Msa0238420:CDS | 35.0% | |
| ACTAGTCAATCAGAAGGTTA+TGG | + | chr2_2:11853383-11853402 | Msa0238420:CDS | 35.0% | |
| CCAACAAAAATGGTATGATC+AGG | - | chr2_2:11853554-11853573 | None:intergenic | 35.0% | |
| !! | CCTGATCATACCATTTTTGT+TGG | + | chr2_2:11853551-11853570 | Msa0238420:CDS | 35.0% |
| AGCCAAATCACCAACAAAAA+TGG | - | chr2_2:11853564-11853583 | None:intergenic | 35.0% | |
| !!! | TTTTGTGAGATTTGCTGATG+AGG | + | chr2_2:11853694-11853713 | Msa0238420:CDS | 35.0% |
| !! | TTTGTGAGATTTGCTGATGA+GGG | + | chr2_2:11853695-11853714 | Msa0238420:CDS | 35.0% |
| ATGTTTGTTCTGCTGCATAA+TGG | + | chr2_2:11853871-11853890 | Msa0238420:intron | 35.0% | |
| ACATATAACTGACCTAAGCA+AGG | - | chr2_2:11854230-11854249 | None:intergenic | 35.0% | |
| !! | GTTTGCCCGTTATATTTTTG+CGG | + | chr2_2:11854254-11854273 | Msa0238420:intron | 35.0% |
| GGAGTAAATTAAAGGAGCAA+AGG | - | chr2_2:11854397-11854416 | None:intergenic | 35.0% | |
| TCAGCATGACTGATCTAAAA+GGG | - | chr2_2:11854817-11854836 | None:intergenic | 35.0% | |
| TTCAGCATGACTGATCTAAA+AGG | - | chr2_2:11854818-11854837 | None:intergenic | 35.0% | |
| !!! | GGTAGGGTTTTAGATAAAGA+TGG | + | chr2_2:11854840-11854859 | Msa0238420:intron | 35.0% |
| !!! | AGGGTTTTAGATAAAGATGG+GGG | + | chr2_2:11854843-11854862 | Msa0238420:intron | 35.0% |
| ! | ACTGCCATGGTTTTCAAATT+GGG | + | chr2_2:11854923-11854942 | Msa0238420:intron | 35.0% |
| CAAGTACCTCACATTGTATT+GGG | - | chr2_2:11855073-11855092 | None:intergenic | 35.0% | |
| ACAAGTACCTCACATTGTAT+TGG | - | chr2_2:11855074-11855093 | None:intergenic | 35.0% | |
| TGTTACAATTTGCAGAAGAC+AGG | - | chr2_2:11855334-11855353 | None:intergenic | 35.0% | |
| ! | TGACTTACATTTTCTTGCAC+CGG | - | chr2_2:11855506-11855525 | None:intergenic | 35.0% |
| ! | GTAGATTTTTGTTGGCAACT+TGG | + | chr2_2:11855871-11855890 | Msa0238420:intron | 35.0% |
| CATGTACTAGTTCACCATAT+TGG | - | chr2_2:11855937-11855956 | None:intergenic | 35.0% | |
| TCCTGATGCAAGAAAAATGA+AGG | - | chr2_2:11856089-11856108 | None:intergenic | 35.0% | |
| ACAAAATGTTCGCCTTTCAT+GGG | + | chr2_2:11856158-11856177 | Msa0238420:CDS | 35.0% | |
| TTAACCTACCCTTGTAATTC+TGG | + | chr2_2:11856212-11856231 | Msa0238420:intron | 35.0% | |
| TAACCTACCCTTGTAATTCT+GGG | + | chr2_2:11856213-11856232 | Msa0238420:intron | 35.0% | |
| GCACGGTCATTAAAAAGATT+TGG | - | chr2_2:11856263-11856282 | None:intergenic | 35.0% | |
| ATAATTCTCATAACCACCCT+GGG | - | chr2_2:11856356-11856375 | None:intergenic | 35.0% | |
| GGATAACTTCCATACACATT+GGG | - | chr2_2:11856409-11856428 | None:intergenic | 35.0% | |
| CAATGTGTATGGAAGTTATC+CGG | + | chr2_2:11856408-11856427 | Msa0238420:CDS | 35.0% | |
| AATGTGTATGGAAGTTATCC+GGG | + | chr2_2:11856409-11856428 | Msa0238420:CDS | 35.0% | |
| AAGAATCCTTATTCCACGAA+GGG | - | chr2_2:11856546-11856565 | None:intergenic | 35.0% | |
| TAAGAATCCTTATTCCACGA+AGG | - | chr2_2:11856547-11856566 | None:intergenic | 35.0% | |
| ! | GATTCACTCTGGTGCTAATT+TGG | - | chr2_2:11852599-11852618 | None:intergenic | 40.0% |
| CCCTAATTTCTTAAGGTCTC+AGG | - | chr2_2:11852625-11852644 | None:intergenic | 40.0% | |
| TCTGTTTACCAATCGCACTT+AGG | + | chr2_2:11852867-11852886 | Msa0238420:intron | 40.0% | |
| CTGTTTACCAATCGCACTTA+GGG | + | chr2_2:11852868-11852887 | Msa0238420:intron | 40.0% | |
| ! | GCATATTTGAGGTTATCGAC+TGG | - | chr2_2:11853133-11853152 | None:intergenic | 40.0% |
| GATCCTATTGGGATAAGGTT+TGG | + | chr2_2:11853164-11853183 | Msa0238420:intron | 40.0% | |
| CAACCAAACCTTATCCCAAT+AGG | - | chr2_2:11853170-11853189 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTCTGACATACAA+TGG | + | chr2_2:11853440-11853459 | Msa0238420:CDS | 40.0% |
| AATGGAACCATTATGCCGAA+TGG | + | chr2_2:11853458-11853477 | Msa0238420:CDS | 40.0% | |
| CTGTAATTCTGACCACCATT+CGG | - | chr2_2:11853476-11853495 | None:intergenic | 40.0% | |
| !!! | TTTTGTTGGTGATTTGGCTG+CGG | + | chr2_2:11853565-11853584 | Msa0238420:CDS | 40.0% |
| ! | TGTTACTGATTACCTTCTCC+AGG | + | chr2_2:11853589-11853608 | Msa0238420:CDS | 40.0% |
| GCTCGTTATAACTCTGTGAA+GGG | + | chr2_2:11853623-11853642 | Msa0238420:CDS | 40.0% | |
| CTCGTTATAACTCTGTGAAG+GGG | + | chr2_2:11853624-11853643 | Msa0238420:CDS | 40.0% | |
| TCGTTATAACTCTGTGAAGG+GGG | + | chr2_2:11853625-11853644 | Msa0238420:CDS | 40.0% | |
| GTTGTGATTGATAGGCTTAC+TGG | + | chr2_2:11853653-11853672 | Msa0238420:CDS | 40.0% | |
| TGATTGATAGGCTTACTGGT+AGG | + | chr2_2:11853657-11853676 | Msa0238420:CDS | 40.0% | |
| TTTGTTCAACAAGACCCATG+AGG | + | chr2_2:11853756-11853775 | Msa0238420:CDS | 40.0% | |
| ACCTGCCACTAATAAAAACC+CGG | + | chr2_2:11853784-11853803 | Msa0238420:CDS | 40.0% | |
| TTTCAGCTGAAATCAGTTCC+AGG | - | chr2_2:11854185-11854204 | None:intergenic | 40.0% | |
| ! | GGAACTGATTTCAGCTGAAA+TGG | + | chr2_2:11854185-11854204 | Msa0238420:intron | 40.0% |
| AGCAAGGACATGCACTAAAA+TGG | - | chr2_2:11854214-11854233 | None:intergenic | 40.0% | |
| TTTAGTGCATGTCCTTGCTT+AGG | + | chr2_2:11854215-11854234 | Msa0238420:intron | 40.0% | |
| !! | GTTCTTGTCATTTCGCCTTT+TGG | + | chr2_2:11854304-11854323 | Msa0238420:intron | 40.0% |
| TAAGATCTGCTTTGGCACAA+GGG | - | chr2_2:11854468-11854487 | None:intergenic | 40.0% | |
| ATAAGATCTGCTTTGGCACA+AGG | - | chr2_2:11854469-11854488 | None:intergenic | 40.0% | |
| CAGCTTATGGTATAATGCAC+AGG | - | chr2_2:11854751-11854770 | None:intergenic | 40.0% | |
| GGGAAAAAGTGAGCAATTGA+TGG | - | chr2_2:11854797-11854816 | None:intergenic | 40.0% | |
| TTAGATCAGTCATGCTGAAG+TGG | + | chr2_2:11854819-11854838 | Msa0238420:intron | 40.0% | |
| ! | GACTGCCATGGTTTTCAAAT+TGG | + | chr2_2:11854922-11854941 | Msa0238420:intron | 40.0% |
| ! | CTGCCATGGTTTTCAAATTG+GGG | + | chr2_2:11854924-11854943 | Msa0238420:intron | 40.0% |
| GATCCCCAATTTGAAAACCA+TGG | - | chr2_2:11854930-11854949 | None:intergenic | 40.0% | |
| ATACCTCCCAATACAATGTG+AGG | + | chr2_2:11855064-11855083 | Msa0238420:intron | 40.0% | |
| TATGTTAGCCAGTAACCAAC+TGG | + | chr2_2:11855141-11855160 | Msa0238420:intron | 40.0% | |
| TGACTCAGAAGCAACAGAAT+GGG | - | chr2_2:11855532-11855551 | None:intergenic | 40.0% | |
| ! | CTTGCTGTGAATTATGCCAA+CGG | + | chr2_2:11855568-11855587 | Msa0238420:intron | 40.0% |
| TTGCTGTGAATTATGCCAAC+GGG | + | chr2_2:11855569-11855588 | Msa0238420:intron | 40.0% | |
| ! | GTACGCACAGTTGTGTTATT+GGG | - | chr2_2:11855790-11855809 | None:intergenic | 40.0% |
| AGTACGCACAGTTGTGTTAT+TGG | - | chr2_2:11855791-11855810 | None:intergenic | 40.0% | |
| ! | AGGCAAGTTTTCACCCAATA+TGG | + | chr2_2:11855920-11855939 | Msa0238420:CDS | 40.0% |
| GTACATGTGAAGATTCCATC+AGG | + | chr2_2:11855950-11855969 | Msa0238420:CDS | 40.0% | |
| ! | ATGCGGGTTTGTCCAATTTT+CGG | + | chr2_2:11855979-11855998 | Msa0238420:CDS | 40.0% |
| !! | GCCTTCATTTTTCTTGCATC+AGG | + | chr2_2:11856085-11856104 | Msa0238420:intron | 40.0% |
| !! | GAGGCAATACGTGTTTTGAA+CGG | + | chr2_2:11856120-11856139 | Msa0238420:CDS | 40.0% |
| TTGAACGGAACTTTATTGGG+TGG | + | chr2_2:11856135-11856154 | Msa0238420:CDS | 40.0% | |
| GACAAAATGTTCGCCTTTCA+TGG | + | chr2_2:11856157-11856176 | Msa0238420:CDS | 40.0% | |
| CAAAATGTTCGCCTTTCATG+GGG | + | chr2_2:11856159-11856178 | Msa0238420:CDS | 40.0% | |
| AAACCAGCCCAGAATTACAA+GGG | - | chr2_2:11856223-11856242 | None:intergenic | 40.0% | |
| TGAGTCTGAGAACAAAAGCA+CGG | - | chr2_2:11856280-11856299 | None:intergenic | 40.0% | |
| CATAATTCTCATAACCACCC+TGG | - | chr2_2:11856357-11856376 | None:intergenic | 40.0% | |
| CAGGGTGGTTATGAGAATTA+TGG | + | chr2_2:11856355-11856374 | Msa0238420:CDS | 40.0% | |
| CGGATAACTTCCATACACAT+TGG | - | chr2_2:11856410-11856429 | None:intergenic | 40.0% | |
| ATGTGTATGGAAGTTATCCG+GGG | + | chr2_2:11856410-11856429 | Msa0238420:CDS | 40.0% | |
| !! | ACCTTTGTGAGCTGTTTTGA+TGG | + | chr2_2:11856510-11856529 | Msa0238420:three_prime_UTR | 40.0% |
| TCCATCAAAACAGCTCACAA+AGG | - | chr2_2:11856514-11856533 | None:intergenic | 40.0% | |
| TAGCAATCAAATGGGGAAGA+GGG | - | chr2_2:11856579-11856598 | None:intergenic | 40.0% | |
| TAAAGGGATACAAGAGCCTT+TGG | - | chr2_2:11856619-11856638 | None:intergenic | 40.0% | |
| AATCACCGATCCAGAGAGTA+CGG | - | chr2_2:11852330-11852349 | None:intergenic | 45.0% | |
| TATACCTGCTTCGGTAACAC+CGG | + | chr2_2:11852379-11852398 | Msa0238420:CDS | 45.0% | |
| AATTGGGCAACTTTCAGTGC+TGG | + | chr2_2:11853500-11853519 | Msa0238420:CDS | 45.0% | |
| ! | ACCTTCTCCAGGAGACTTTT+AGG | + | chr2_2:11853600-11853619 | Msa0238420:CDS | 45.0% |
| ! | CCTTCTCCAGGAGACTTTTA+GGG | + | chr2_2:11853601-11853620 | Msa0238420:CDS | 45.0% |
| GGCTCGTTATAACTCTGTGA+AGG | + | chr2_2:11853622-11853641 | Msa0238420:CDS | 45.0% | |
| GGGCGAAAGTTGTGATTGAT+AGG | + | chr2_2:11853645-11853664 | Msa0238420:CDS | 45.0% | |
| TAGGCTTACTGGTAGGTCTA+AGG | + | chr2_2:11853664-11853683 | Msa0238420:CDS | 45.0% | |
| AGGCTTACTGGTAGGTCTAA+GGG | + | chr2_2:11853665-11853684 | Msa0238420:CDS | 45.0% | |
| ACTGGTAGGTCTAAGGGATA+TGG | + | chr2_2:11853671-11853690 | Msa0238420:CDS | 45.0% | |
| TGATGAGGGTGAACAGATGA+GGG | + | chr2_2:11853709-11853728 | Msa0238420:CDS | 45.0% | |
| TCAACAAGACCCATGAGGAT+TGG | + | chr2_2:11853761-11853780 | Msa0238420:CDS | 45.0% | |
| ATTGCAGGAAGAAACGACTG+TGG | - | chr2_2:11854052-11854071 | None:intergenic | 45.0% | |
| AACTCCTGTTGTCTCAAAGC+AGG | + | chr2_2:11854132-11854151 | Msa0238420:intron | 45.0% | |
| ACTCCTGTTGTCTCAAAGCA+GGG | + | chr2_2:11854133-11854152 | Msa0238420:intron | 45.0% | |
| GGAGCAAAGGCTATGAATGA+TGG | - | chr2_2:11854384-11854403 | None:intergenic | 45.0% | |
| ATCAGTCATGCTGAAGTGGT+AGG | + | chr2_2:11854823-11854842 | Msa0238420:intron | 45.0% | |
| TCAGTCATGCTGAAGTGGTA+GGG | + | chr2_2:11854824-11854843 | Msa0238420:intron | 45.0% | |
| GTACCTCACATTGTATTGGG+AGG | - | chr2_2:11855070-11855089 | None:intergenic | 45.0% | |
| CTGACTCAGAAGCAACAGAA+TGG | - | chr2_2:11855533-11855552 | None:intergenic | 45.0% | |
| TGCTGTGAATTATGCCAACG+GGG | + | chr2_2:11855570-11855589 | Msa0238420:intron | 45.0% | |
| AGATGATCGTCGGTGACATT+TGG | - | chr2_2:11855899-11855918 | None:intergenic | 45.0% | |
| AACTTGCCTCAGATGATCGT+CGG | - | chr2_2:11855909-11855928 | None:intergenic | 45.0% | |
| ! | GGTTTGTCCAATTTTCGGAC+AGG | + | chr2_2:11855984-11856003 | Msa0238420:CDS | 45.0% |
| ACGCACTCCTTCAAACAAAC+AGG | + | chr2_2:11856182-11856201 | Msa0238420:CDS | 45.0% | |
| CAAACCAGCCCAGAATTACA+AGG | - | chr2_2:11856224-11856243 | None:intergenic | 45.0% | |
| ACTCAACAAGATCCAACCCA+GGG | + | chr2_2:11856295-11856314 | Msa0238420:CDS | 45.0% | |
| !! | TTTGCTGTTGTTGCTGCTGT+GGG | - | chr2_2:11856453-11856472 | None:intergenic | 45.0% |
| !! | ATTTGCTGTTGTTGCTGCTG+TGG | - | chr2_2:11856454-11856473 | None:intergenic | 45.0% |
| ACAGCAGCAACAACAGCAAA+TGG | + | chr2_2:11856453-11856472 | Msa0238420:CDS | 45.0% | |
| CAGCAGCAACAACAGCAAAT+GGG | + | chr2_2:11856454-11856473 | Msa0238420:CDS | 45.0% | |
| ! | GCTTTTCCCTTCGTGGAATA+AGG | + | chr2_2:11856537-11856556 | Msa0238420:three_prime_UTR | 45.0% |
| AGCAATCAAATGGGGAAGAG+GGG | - | chr2_2:11856578-11856597 | None:intergenic | 45.0% | |
| CTAGCAATCAAATGGGGAAG+AGG | - | chr2_2:11856580-11856599 | None:intergenic | 45.0% | |
| CCTGGTTGCATCATCTCTCT+CGG | - | chr2_2:11852145-11852164 | None:intergenic | 50.0% | |
| GAGATGATGCAACCAGGACA+CGG | + | chr2_2:11852148-11852167 | Msa0238420:exon | 50.0% | |
| GGTATTGTTGCGGTGGTTGT+TGG | - | chr2_2:11852195-11852214 | None:intergenic | 50.0% | |
| GGTGGCTGTTGGTATTGTTG+CGG | - | chr2_2:11852205-11852224 | None:intergenic | 50.0% | |
| TGTGGTGGCATCATGACGTA+CGG | - | chr2_2:11852238-11852257 | None:intergenic | 50.0% | |
| ACAACAACCGCCAGCTATGT+GGG | + | chr2_2:11852255-11852274 | Msa0238420:CDS | 50.0% | |
| ! | GGATCGGTGATTTGCAGTAC+TGG | + | chr2_2:11852338-11852357 | Msa0238420:CDS | 50.0% |
| ! | CGGTGATTTGCAGTACTGGA+TGG | + | chr2_2:11852342-11852361 | Msa0238420:CDS | 50.0% |
| GTCTCAGGTTCGATTCACTC+TGG | - | chr2_2:11852610-11852629 | None:intergenic | 50.0% | |
| AAACAGGCCCTAAGTGCGAT+TGG | - | chr2_2:11852878-11852897 | None:intergenic | 50.0% | |
| AATCGCACTTAGGGCCTGTT+TGG | + | chr2_2:11852877-11852896 | Msa0238420:intron | 50.0% | |
| GGAACCATTATGCCGAATGG+TGG | + | chr2_2:11853461-11853480 | Msa0238420:CDS | 50.0% | |
| CTGACCACCATTCGGCATAA+TGG | - | chr2_2:11853468-11853487 | None:intergenic | 50.0% | |
| !! | CAACTTTCAGTGCTGGTGAG+AGG | + | chr2_2:11853507-11853526 | Msa0238420:CDS | 50.0% |
| CCCTAAAAGTCTCCTGGAGA+AGG | - | chr2_2:11853604-11853623 | None:intergenic | 50.0% | |
| AACGAGCCCTAAAAGTCTCC+TGG | - | chr2_2:11853610-11853629 | None:intergenic | 50.0% | |
| CTGATGAGGGTGAACAGATG+AGG | + | chr2_2:11853708-11853727 | Msa0238420:CDS | 50.0% | |
| AGGGCTATGACTGAGATGCA+AGG | + | chr2_2:11853728-11853747 | Msa0238420:CDS | 50.0% | |
| GGGCTATGACTGAGATGCAA+GGG | + | chr2_2:11853729-11853748 | Msa0238420:CDS | 50.0% | |
| GGCTATGACTGAGATGCAAG+GGG | + | chr2_2:11853730-11853749 | Msa0238420:CDS | 50.0% | |
| ! | GCCGGGTTTTTATTAGTGGC+AGG | - | chr2_2:11853788-11853807 | None:intergenic | 50.0% |
| ! | GGCAGCCGGGTTTTTATTAG+TGG | - | chr2_2:11853792-11853811 | None:intergenic | 50.0% |
| AGACAAACCTTTCGGCTGAG+TGG | - | chr2_2:11853816-11853835 | None:intergenic | 50.0% | |
| CAGGAAGAAACGACTGTGGA+CGG | - | chr2_2:11854048-11854067 | None:intergenic | 50.0% | |
| !! | ACACCCTGCTTTGAGACAAC+AGG | - | chr2_2:11854139-11854158 | None:intergenic | 50.0% |
| ! | TCTCAAAGCAGGGTGTCAAG+AGG | + | chr2_2:11854143-11854162 | Msa0238420:intron | 50.0% |
| GTCAAGAGGCTCTGTCATCT+CGG | + | chr2_2:11854157-11854176 | Msa0238420:intron | 50.0% | |
| ! | TCTAAAACAGGGGCTCCAGT+TGG | - | chr2_2:11855159-11855178 | None:intergenic | 50.0% |
| TTGACCCATGATTGACTGCG+TGG | + | chr2_2:11855241-11855260 | Msa0238420:intron | 50.0% | |
| ACAGTACAACAAGTCCCCGT+TGG | - | chr2_2:11855587-11855606 | None:intergenic | 50.0% | |
| GCAGCTTCGTATAACCCTAG+TGG | + | chr2_2:11855745-11855764 | Msa0238420:intron | 50.0% | |
| GCTTCGTATAACCCTAGTGG+CGG | + | chr2_2:11855748-11855767 | Msa0238420:intron | 50.0% | |
| ATGTCACCGACGATCATCTG+AGG | + | chr2_2:11855900-11855919 | Msa0238420:CDS | 50.0% | |
| ATTCCATCAGGCAAGCGATG+CGG | + | chr2_2:11855962-11855981 | Msa0238420:CDS | 50.0% | |
| CAGCCCAGAATTACAAGGGT+AGG | - | chr2_2:11856219-11856238 | None:intergenic | 50.0% | |
| CTACCCTTGTAATTCTGGGC+TGG | + | chr2_2:11856217-11856236 | Msa0238420:intron | 50.0% | |
| GACTCAACAAGATCCAACCC+AGG | + | chr2_2:11856294-11856313 | Msa0238420:intron | 50.0% | |
| CGTAATATCCACCAGCAGCA+GGG | - | chr2_2:11856327-11856346 | None:intergenic | 50.0% | |
| ! | CCTGCTGCTGGTGGATATTA+CGG | + | chr2_2:11856325-11856344 | Msa0238420:CDS | 50.0% |
| TGGATATTACGGCTATGCCC+AGG | + | chr2_2:11856336-11856355 | Msa0238420:CDS | 50.0% | |
| GGATATTACGGCTATGCCCA+GGG | + | chr2_2:11856337-11856356 | Msa0238420:CDS | 50.0% | |
| GGACAGGATCCCAATGTGTA+TGG | + | chr2_2:11856397-11856416 | Msa0238420:CDS | 50.0% | |
| !! | TGTTGGTAACCAGGATACCC+CGG | - | chr2_2:11856430-11856449 | None:intergenic | 50.0% |
| !!! | TGGAGTTGCTTTTCCCTTCG+TGG | + | chr2_2:11856530-11856549 | Msa0238420:three_prime_UTR | 50.0% |
| AAATGGGGAAGAGGGGGAAA+AGG | - | chr2_2:11856571-11856590 | None:intergenic | 50.0% | |
| GCAATCAAATGGGGAAGAGG+GGG | - | chr2_2:11856577-11856596 | None:intergenic | 50.0% | |
| CCGAGAGAGATGATGCAACC+AGG | + | chr2_2:11852142-11852161 | Msa0238420:exon | 55.0% | |
| GGCTGTTGGTATTGTTGCGG+TGG | - | chr2_2:11852202-11852221 | None:intergenic | 55.0% | |
| ATCATGACGTACGGCTGCTG+TGG | - | chr2_2:11852229-11852248 | None:intergenic | 55.0% | |
| ATAGCTGGCGGTTGTTGTGG+TGG | - | chr2_2:11852253-11852272 | None:intergenic | 55.0% | |
| CACATAGCTGGCGGTTGTTG+TGG | - | chr2_2:11852256-11852275 | None:intergenic | 55.0% | |
| CACAACAACCGCCAGCTATG+TGG | + | chr2_2:11852254-11852273 | Msa0238420:CDS | 55.0% | |
| CTGATGAGGTCCGTACTCTC+TGG | + | chr2_2:11852317-11852336 | Msa0238420:CDS | 55.0% | |
| GAGGTCCGTACTCTCTGGAT+CGG | + | chr2_2:11852322-11852341 | Msa0238420:CDS | 55.0% | |
| GTGGCAGGTCCAATCCTCAT+GGG | - | chr2_2:11853773-11853792 | None:intergenic | 55.0% | |
| AGTGGCAGGTCCAATCCTCA+TGG | - | chr2_2:11853774-11853793 | None:intergenic | 55.0% | |
| CAAACCTTTCGGCTGAGTGG+TGG | - | chr2_2:11853813-11853832 | None:intergenic | 55.0% | |
| GGCTCCACGCAGTCAATCAT+GGG | - | chr2_2:11855248-11855267 | None:intergenic | 55.0% | |
| AGGCTCCACGCAGTCAATCA+TGG | - | chr2_2:11855249-11855268 | None:intergenic | 55.0% | |
| TCTCGCTTTGTCCGCCACTA+GGG | - | chr2_2:11855762-11855781 | None:intergenic | 55.0% | |
| TTCTCGCTTTGTCCGCCACT+AGG | - | chr2_2:11855763-11855782 | None:intergenic | 55.0% | |
| TTCCATCAGGCAAGCGATGC+GGG | + | chr2_2:11855963-11855982 | Msa0238420:CDS | 55.0% | |
| CATCAGGAGCTGTGCAGAAG+AGG | + | chr2_2:11856101-11856120 | Msa0238420:intron | 55.0% | |
| ! | AAGGAGTGCGTCCCCATGAA+AGG | - | chr2_2:11856173-11856192 | None:intergenic | 55.0% |
| CAACAAGATCCAACCCAGGG+TGG | + | chr2_2:11856298-11856317 | Msa0238420:CDS | 55.0% | |
| CCGTAATATCCACCAGCAGC+AGG | - | chr2_2:11856328-11856347 | None:intergenic | 55.0% | |
| TATTACGGCTATGCCCAGGG+TGG | + | chr2_2:11856340-11856359 | Msa0238420:CDS | 55.0% | |
| ACATTGGGATCCTGTCCAGC+AGG | - | chr2_2:11856394-11856413 | None:intergenic | 55.0% | |
| ! | GGAAGTTATCCGGGGTATCC+TGG | + | chr2_2:11856418-11856437 | Msa0238420:CDS | 55.0% |
| !! | TGCTGTGGGTGTTGGTAACC+AGG | - | chr2_2:11856439-11856458 | None:intergenic | 55.0% |
| GTTGTTGCTGCTGTGGGTGT+TGG | - | chr2_2:11856447-11856466 | None:intergenic | 55.0% | |
| GATGCAACCAGGACACGGCA+TGG | + | chr2_2:11852153-11852172 | Msa0238420:CDS | 60.0% | |
| GGTGGTTGTTGGCCCATGGT+GGG | - | chr2_2:11852184-11852203 | None:intergenic | 60.0% | |
| TTGCGGTGGTTGTTGGCCCA+TGG | - | chr2_2:11852188-11852207 | None:intergenic | 60.0% | |
| ATGACGTACGGCTGCTGTGG+TGG | - | chr2_2:11852226-11852245 | None:intergenic | 60.0% | |
| ACAACCGCCAGCTATGTGGG+CGG | + | chr2_2:11852258-11852277 | Msa0238420:CDS | 60.0% | |
| ! | CTGAGGAGGCTGAGCGGATT+GGG | - | chr2_2:11852284-11852303 | None:intergenic | 60.0% |
| AGTACGGACCTCATCAGCGC+TGG | - | chr2_2:11852314-11852333 | None:intergenic | 60.0% | |
| AGGTCGTCGAGGCAGGATGA+TGG | + | chr2_2:11853527-11853546 | Msa0238420:CDS | 60.0% | |
| CAGGGGCTCCAGTTGGTTAC+TGG | - | chr2_2:11855152-11855171 | None:intergenic | 60.0% | |
| AACCCGCATCGCTTGCCTGA+TGG | - | chr2_2:11855968-11855987 | None:intergenic | 60.0% | |
| AGCAGCAGGGTAACCACCCT+GGG | - | chr2_2:11856314-11856333 | None:intergenic | 60.0% | |
| TTGGGATCCTGTCCAGCAGG+AGG | - | chr2_2:11856391-11856410 | None:intergenic | 60.0% | |
| GGCATGGCTCCTCCCACCAT+GGG | + | chr2_2:11852169-11852188 | Msa0238420:CDS | 65.0% | |
| ! | GGTTGTTGGCCCATGGTGGG+AGG | - | chr2_2:11852181-11852200 | None:intergenic | 65.0% |
| CGGTGGTTGTTGGCCCATGG+TGG | - | chr2_2:11852185-11852204 | None:intergenic | 65.0% | |
| !! | GCTGCTGTGGTGGTGGCTGT+TGG | - | chr2_2:11852216-11852235 | None:intergenic | 65.0% |
| ACGTACGGCTGCTGTGGTGG+TGG | - | chr2_2:11852223-11852242 | None:intergenic | 65.0% | |
| GATTGGGCCGCCCACATAGC+TGG | - | chr2_2:11852268-11852287 | None:intergenic | 65.0% | |
| GCTGAGGAGGCTGAGCGGAT+TGG | - | chr2_2:11852285-11852304 | None:intergenic | 65.0% | |
| ! | ACGGACCTCATCAGCGCTGG+CGG | - | chr2_2:11852311-11852330 | None:intergenic | 65.0% |
| !! | CTCGCCGGTGTTACCGAAGC+AGG | - | chr2_2:11852386-11852405 | None:intergenic | 65.0% |
| CTGCTTCGGTAACACCGGCG+AGG | + | chr2_2:11852384-11852403 | Msa0238420:CDS | 65.0% | |
| ! | GTGCTGGTGAGAGGTCGTCG+AGG | + | chr2_2:11853516-11853535 | Msa0238420:CDS | 65.0% |
| TGGTGAGAGGTCGTCGAGGC+AGG | + | chr2_2:11853520-11853539 | Msa0238420:CDS | 65.0% | |
| TTCGGCTGAGTGGTGGCAGC+CGG | - | chr2_2:11853806-11853825 | None:intergenic | 65.0% | |
| GCTGCCACCACTCAGCCGAA+AGG | + | chr2_2:11853806-11853825 | Msa0238420:CDS | 65.0% | |
| GGCTCTGTCATCTCGGAGCC+TGG | + | chr2_2:11854164-11854183 | Msa0238420:intron | 65.0% | |
| GCAGGGTAACCACCCTGGGT+TGG | - | chr2_2:11856310-11856329 | None:intergenic | 65.0% | |
| CAGCAGCAGGGTAACCACCC+TGG | - | chr2_2:11856315-11856334 | None:intergenic | 65.0% | |
| CAGGGTGGTTACCCTGCTGC+TGG | + | chr2_2:11856313-11856332 | Msa0238420:CDS | 65.0% | |
| GGTGGTTACCCTGCTGCTGG+TGG | + | chr2_2:11856316-11856335 | Msa0238420:CDS | 65.0% | |
| GGTTACGCTGCTCCTCCTGC+TGG | + | chr2_2:11856376-11856395 | Msa0238420:CDS | 65.0% | |
| GGAGGAGCCATGCCGTGTCC+TGG | - | chr2_2:11852163-11852182 | None:intergenic | 70.0% | |
| CGGCATGGCTCCTCCCACCA+TGG | + | chr2_2:11852168-11852187 | Msa0238420:CDS | 70.0% | |
| TGGGCCGCCCACATAGCTGG+CGG | - | chr2_2:11852265-11852284 | None:intergenic | 70.0% | |
| GGGCTGCTGAGGAGGCTGAG+CGG | - | chr2_2:11852290-11852309 | None:intergenic | 70.0% | |
| !! | CGGACCTCATCAGCGCTGGC+GGG | - | chr2_2:11852310-11852329 | None:intergenic | 70.0% |
| TCGGCTGAGTGGTGGCAGCC+GGG | - | chr2_2:11853805-11853824 | None:intergenic | 70.0% | |
| CGCTGCTCCTCCTGCTGGAC+AGG | + | chr2_2:11856381-11856400 | Msa0238420:CDS | 70.0% | |
| !! | TCAGCGCTGGCGGGCTGCTG+AGG | - | chr2_2:11852301-11852320 | None:intergenic | 75.0% |
| !! | GCAGCCCGCCAGCGCTGATG+AGG | + | chr2_2:11852303-11852322 | Msa0238420:CDS | 75.0% |
| !!! | GCGCTGGCGGGCTGCTGAGG+AGG | - | chr2_2:11852298-11852317 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 11852041 | 11856817 | 11852041 | ID=Msa0238420;Name=Msa0238420 |
| chr2_2 | mRNA | 11852041 | 11856817 | 11852041 | ID=Msa0238420-mRNA-1;Parent=Msa0238420;Name=Msa0238420-mRNA-1;_AED=0.26;_eAED=0.26;_QI=110|1|1|1|1|1|6|331|401 |
| chr2_2 | exon | 11852041 | 11852405 | 11852041 | ID=Msa0238420-mRNA-1:exon:5129;Parent=Msa0238420-mRNA-1 |
| chr2_2 | exon | 11853350 | 11853827 | 11853350 | ID=Msa0238420-mRNA-1:exon:5130;Parent=Msa0238420-mRNA-1 |
| chr2_2 | exon | 11855749 | 11855801 | 11855749 | ID=Msa0238420-mRNA-1:exon:5131;Parent=Msa0238420-mRNA-1 |
| chr2_2 | exon | 11855875 | 11856005 | 11855875 | ID=Msa0238420-mRNA-1:exon:5132;Parent=Msa0238420-mRNA-1 |
| chr2_2 | exon | 11856107 | 11856203 | 11856107 | ID=Msa0238420-mRNA-1:exon:5133;Parent=Msa0238420-mRNA-1 |
| chr2_2 | exon | 11856295 | 11856817 | 11856295 | ID=Msa0238420-mRNA-1:exon:5134;Parent=Msa0238420-mRNA-1 |
| chr2_2 | five_prime_UTR | 11852041 | 11852150 | 11852041 | ID=Msa0238420-mRNA-1:five_prime_utr;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11852151 | 11852405 | 11852151 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11853350 | 11853827 | 11853350 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11855749 | 11855801 | 11855749 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11855875 | 11856005 | 11855875 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11856107 | 11856203 | 11856107 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | CDS | 11856295 | 11856486 | 11856295 | ID=Msa0238420-mRNA-1:cds;Parent=Msa0238420-mRNA-1 |
| chr2_2 | three_prime_UTR | 11856487 | 11856817 | 11856487 | ID=Msa0238420-mRNA-1:three_prime_utr;Parent=Msa0238420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
