Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1258600 | XP_003608836.1 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1258600 | sp|Q8LBB2|KING1_ARATH | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0.0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000180 | Msa1258600 | -0.802288 | 6.023081e-49 | -8.615850e-47 |
Msa0003370 | Msa1258600 | -0.833150 | 6.291172e-56 | -8.615850e-47 |
Msa0025060 | Msa1258600 | -0.874422 | 6.836316e-68 | -8.615850e-47 |
Msa0025090 | Msa1258600 | -0.853005 | 3.179298e-61 | -8.615850e-47 |
Msa0028450 | Msa1258600 | -0.803531 | 3.334599e-49 | -8.615850e-47 |
Msa0030320 | Msa1258600 | -0.810502 | 1.116490e-50 | -8.615850e-47 |
Msa0030710 | Msa1258600 | -0.805603 | 1.232611e-49 | -8.615850e-47 |
Msa0032040 | Msa1258600 | -0.816167 | 6.357742e-52 | -8.615850e-47 |
Msa0034590 | Msa1258600 | -0.804236 | 2.379575e-49 | -8.615850e-47 |
Msa0034800 | Msa1258600 | -0.836971 | 6.843298e-57 | -8.615850e-47 |
Msa0036560 | Msa1258600 | -0.854416 | 1.249375e-61 | -8.615850e-47 |
Msa0047990 | Msa1258600 | 0.826650 | 2.415218e-54 | -8.615850e-47 |
Msa0050850 | Msa1258600 | -0.809055 | 2.285850e-50 | -8.615850e-47 |
Msa0072590 | Msa1258600 | -0.852414 | 4.689219e-61 | -8.615850e-47 |
Msa0072910 | Msa1258600 | -0.820940 | 5.260383e-53 | -8.615850e-47 |
Msa0077920 | Msa1258600 | -0.810210 | 1.290948e-50 | -8.615850e-47 |
Msa0079320 | Msa1258600 | -0.803908 | 2.785321e-49 | -8.615850e-47 |
Msa0081700 | Msa1258600 | -0.801502 | 8.734963e-49 | -8.615850e-47 |
Msa0083200 | Msa1258600 | -0.815066 | 1.118077e-51 | -8.615850e-47 |
Msa0089410 | Msa1258600 | -0.835441 | 1.675336e-56 | -8.615850e-47 |
Msa0092390 | Msa1258600 | -0.806940 | 6.443000e-50 | -8.615850e-47 |
Msa0099090 | Msa1258600 | -0.804013 | 2.647794e-49 | -8.615850e-47 |
Msa0106810 | Msa1258600 | -0.807086 | 6.000343e-50 | -8.615850e-47 |
Msa0112800 | Msa1258600 | -0.811877 | 5.618393e-51 | -8.615850e-47 |
Msa0114960 | Msa1258600 | -0.817364 | 3.426174e-52 | -8.615850e-47 |
Msa0604890 | Msa1258600 | -0.800719 | 1.263125e-48 | -8.615850e-47 |
Msa0611450 | Msa1258600 | -0.805911 | 1.062068e-49 | -8.615850e-47 |
Msa0619460 | Msa1258600 | -0.835827 | 1.337414e-56 | -8.615850e-47 |
Msa0619520 | Msa1258600 | -0.829516 | 4.927385e-55 | -8.615850e-47 |
Msa0624890 | Msa1258600 | -0.840921 | 6.496025e-58 | -8.615850e-47 |
Msa0626890 | Msa1258600 | -0.805570 | 1.252397e-49 | -8.615850e-47 |
Msa0641970 | Msa1258600 | -0.831543 | 1.573142e-55 | -8.615850e-47 |
Msa0646180 | Msa1258600 | -0.807818 | 4.196845e-50 | -8.615850e-47 |
Msa0648410 | Msa1258600 | -0.806306 | 8.771731e-50 | -8.615850e-47 |
Msa0651720 | Msa1258600 | -0.808820 | 2.567211e-50 | -8.615850e-47 |
Msa0659590 | Msa1258600 | -0.826244 | 3.017157e-54 | -8.615850e-47 |
Msa0665010 | Msa1258600 | -0.847795 | 9.225955e-60 | -8.615850e-47 |
Msa0667710 | Msa1258600 | -0.829941 | 3.884236e-55 | -8.615850e-47 |
Msa0681040 | Msa1258600 | -0.819458 | 1.149201e-52 | -8.615850e-47 |
Msa0690920 | Msa1258600 | -0.815424 | 9.311882e-52 | -8.615850e-47 |
Msa0708840 | Msa1258600 | -0.806521 | 7.901342e-50 | -8.615850e-47 |
Msa0709820 | Msa1258600 | 0.832414 | 9.584832e-56 | -8.615850e-47 |
Msa0715050 | Msa1258600 | -0.809104 | 2.231367e-50 | -8.615850e-47 |
Msa0721260 | Msa1258600 | 0.821156 | 4.690825e-53 | -8.615850e-47 |
Msa0722660 | Msa1258600 | -0.800246 | 1.576683e-48 | -8.615850e-47 |
Msa0742690 | Msa1258600 | -0.833302 | 5.765832e-56 | -8.615850e-47 |
Msa0743630 | Msa1258600 | -0.827264 | 1.721998e-54 | -8.615850e-47 |
Msa0747500 | Msa1258600 | 0.821331 | 4.274855e-53 | -8.615850e-47 |
Msa0748940 | Msa1258600 | 0.826898 | 2.107206e-54 | -8.615850e-47 |
Msa0753410 | Msa1258600 | 0.855972 | 4.405081e-62 | -8.615850e-47 |
Msa0762390 | Msa1258600 | -0.805042 | 1.615639e-49 | -8.615850e-47 |
Msa0762470 | Msa1258600 | -0.800754 | 1.242402e-48 | -8.615850e-47 |
Msa0777210 | Msa1258600 | 0.801399 | 9.173168e-49 | -8.615850e-47 |
Msa0779830 | Msa1258600 | -0.831177 | 1.934749e-55 | -8.615850e-47 |
Msa0783680 | Msa1258600 | 0.815827 | 7.572109e-52 | -8.615850e-47 |
Msa0795330 | Msa1258600 | 0.857528 | 1.535429e-62 | -8.615850e-47 |
Msa0807170 | Msa1258600 | -0.800348 | 1.503077e-48 | -8.615850e-47 |
Msa0814350 | Msa1258600 | 0.817000 | 4.136532e-52 | -8.615850e-47 |
Msa0824750 | Msa1258600 | -0.810921 | 9.062717e-51 | -8.615850e-47 |
Msa0826360 | Msa1258600 | 0.806431 | 8.255732e-50 | -8.615850e-47 |
Msa0827560 | Msa1258600 | -0.837761 | 4.296328e-57 | -8.615850e-47 |
Msa0841550 | Msa1258600 | 0.820425 | 6.904949e-53 | -8.615850e-47 |
Msa0121080 | Msa1258600 | -0.820065 | 8.351313e-53 | -8.615850e-47 |
Msa0125810 | Msa1258600 | -0.812682 | 3.748997e-51 | -8.615850e-47 |
Msa0131800 | Msa1258600 | 0.811000 | 8.710759e-51 | -8.615850e-47 |
Msa0136010 | Msa1258600 | 0.817385 | 3.389390e-52 | -8.615850e-47 |
Msa0136520 | Msa1258600 | -0.851991 | 6.185246e-61 | -8.615850e-47 |
Msa0139280 | Msa1258600 | -0.860899 | 1.496701e-63 | -8.615850e-47 |
Msa0143360 | Msa1258600 | -0.800921 | 1.148451e-48 | -8.615850e-47 |
Msa0146570 | Msa1258600 | -0.837850 | 4.075590e-57 | -8.615850e-47 |
Msa0153290 | Msa1258600 | -0.816333 | 5.836226e-52 | -8.615850e-47 |
Msa0166580 | Msa1258600 | -0.815506 | 8.926920e-52 | -8.615850e-47 |
Msa0167800 | Msa1258600 | -0.802482 | 5.494339e-49 | -8.615850e-47 |
Msa0170640 | Msa1258600 | -0.807356 | 5.260419e-50 | -8.615850e-47 |
Msa0172110 | Msa1258600 | -0.835793 | 1.364216e-56 | -8.615850e-47 |
Msa0173260 | Msa1258600 | 0.852214 | 5.346213e-61 | -8.615850e-47 |
Msa0174800 | Msa1258600 | -0.828820 | 7.269887e-55 | -8.615850e-47 |
Msa0176610 | Msa1258600 | -0.875639 | 2.630163e-68 | -8.615850e-47 |
Msa0183960 | Msa1258600 | -0.817357 | 3.438423e-52 | -8.615850e-47 |
Msa0186380 | Msa1258600 | -0.814842 | 1.253726e-51 | -8.615850e-47 |
Msa0187820 | Msa1258600 | -0.802948 | 4.403045e-49 | -8.615850e-47 |
Msa0192890 | Msa1258600 | 0.874998 | 4.356830e-68 | -8.615850e-47 |
Msa0194370 | Msa1258600 | -0.804439 | 2.158753e-49 | -8.615850e-47 |
Msa0194900 | Msa1258600 | -0.800474 | 1.416881e-48 | -8.615850e-47 |
Msa0198140 | Msa1258600 | -0.803222 | 3.864239e-49 | -8.615850e-47 |
Msa0198220 | Msa1258600 | -0.800251 | 1.572966e-48 | -8.615850e-47 |
Msa0201910 | Msa1258600 | -0.823106 | 1.655958e-53 | -8.615850e-47 |
Msa0206600 | Msa1258600 | -0.825488 | 4.562560e-54 | -8.615850e-47 |
Msa0207220 | Msa1258600 | -0.825354 | 4.907893e-54 | -8.615850e-47 |
Msa0207530 | Msa1258600 | -0.814666 | 1.371732e-51 | -8.615850e-47 |
Msa0207900 | Msa1258600 | -0.821943 | 3.085624e-53 | -8.615850e-47 |
Msa0219140 | Msa1258600 | -0.850681 | 1.451274e-60 | -8.615850e-47 |
Msa0226580 | Msa1258600 | -0.822403 | 2.413485e-53 | -8.615850e-47 |
Msa0232170 | Msa1258600 | -0.805961 | 1.036887e-49 | -8.615850e-47 |
Msa0235020 | Msa1258600 | 0.850089 | 2.126712e-60 | -8.615850e-47 |
Msa1227090 | Msa1258600 | -0.813117 | 3.010806e-51 | -8.615850e-47 |
Msa1229880 | Msa1258600 | -0.800596 | 1.338512e-48 | -8.615850e-47 |
Msa1235960 | Msa1258600 | -0.837579 | 4.783746e-57 | -8.615850e-47 |
Msa1235990 | Msa1258600 | -0.842040 | 3.296703e-58 | -8.615850e-47 |
Msa1251500 | Msa1258600 | 0.813219 | 2.859601e-51 | -8.615850e-47 |
Msa1251890 | Msa1258600 | -0.814885 | 1.226365e-51 | -8.615850e-47 |
Msa1251960 | Msa1258600 | -0.814492 | 1.498777e-51 | -8.615850e-47 |
Msa1252220 | Msa1258600 | -0.827908 | 1.206434e-54 | -8.615850e-47 |
Msa1257170 | Msa1258600 | 0.904944 | 7.225022e-80 | -8.615850e-47 |
Msa1258600 | Msa1267800 | -0.823656 | 1.231786e-53 | -8.615850e-47 |
Msa1258600 | Msa1279240 | -0.814842 | 1.253706e-51 | -8.615850e-47 |
Msa1258600 | Msa1295840 | -0.814899 | 1.217970e-51 | -8.615850e-47 |
Msa1258600 | Msa1298440 | 0.979438 | 5.725050e-148 | -8.615850e-47 |
Msa1258600 | Msa1302120 | 0.886415 | 3.490423e-72 | -8.615850e-47 |
Msa1258600 | Msa1304980 | 0.834558 | 2.796682e-56 | -8.615850e-47 |
Msa1258600 | Msa1314810 | 0.827665 | 1.379967e-54 | -8.615850e-47 |
Msa1258600 | Msa1316090 | -0.836741 | 7.834948e-57 | -8.615850e-47 |
Msa1258600 | Msa1327400 | -0.814930 | 1.198678e-51 | -8.615850e-47 |
Msa1258600 | Msa1327420 | -0.811569 | 6.555836e-51 | -8.615850e-47 |
Msa1258600 | Msa1332180 | -0.806258 | 8.975887e-50 | -8.615850e-47 |
Msa1258600 | Msa1336130 | 0.831604 | 1.519022e-55 | -8.615850e-47 |
Msa1258600 | Msa1344460 | 0.808399 | 3.157263e-50 | -8.615850e-47 |
Msa1258600 | Msa1344870 | -0.801876 | 7.322504e-49 | -8.615850e-47 |
Msa1258600 | Msa1357760 | -0.837382 | 5.373441e-57 | -8.615850e-47 |
Msa1258600 | Msa1359880 | -0.804439 | 2.158902e-49 | -8.615850e-47 |
Msa1258600 | Msa1368800 | -0.804756 | 1.854518e-49 | -8.615850e-47 |
Msa1258600 | Msa1370830 | -0.828621 | 8.121718e-55 | -8.615850e-47 |
Msa1258600 | Msa1374140 | 0.801532 | 8.612261e-49 | -8.615850e-47 |
Msa1258600 | Msa1375640 | 0.844317 | 8.146568e-59 | -8.615850e-47 |
Msa1258600 | Msa1376520 | 0.857254 | 1.849474e-62 | -8.615850e-47 |
Msa1258600 | Msa1377170 | -0.814629 | 1.397543e-51 | -8.615850e-47 |
Msa1258600 | Msa1382640 | 0.811607 | 6.434389e-51 | -8.615850e-47 |
Msa1258600 | Msa1386150 | 0.822503 | 2.287258e-53 | -8.615850e-47 |
Msa1258600 | Msa1392990 | -0.808437 | 3.098123e-50 | -8.615850e-47 |
Msa1258600 | Msa1395700 | -0.864494 | 1.168109e-64 | -8.615850e-47 |
Msa1258600 | Msa1397550 | -0.852878 | 3.457319e-61 | -8.615850e-47 |
Msa1258600 | Msa1398110 | 0.824256 | 8.905384e-54 | -8.615850e-47 |
Msa1258600 | Msa1400600 | -0.812745 | 3.632525e-51 | -8.615850e-47 |
Msa1258600 | Msa1400940 | 0.999162 | 1.758916e-293 | -8.615850e-47 |
Msa1258600 | Msa1402000 | 0.835347 | 1.768811e-56 | -8.615850e-47 |
Msa1258600 | Msa1420630 | -0.834121 | 3.600008e-56 | -8.615850e-47 |
Msa1258600 | Msa1425570 | -0.834067 | 3.714242e-56 | -8.615850e-47 |
Msa1258600 | Msa1426690 | -0.809506 | 1.829735e-50 | -8.615850e-47 |
Msa1258600 | Msa1429190 | 0.850950 | 1.219142e-60 | -8.615850e-47 |
Msa1258600 | Msa1431050 | 0.831074 | 2.051131e-55 | -8.615850e-47 |
Msa1258600 | Msa1433060 | -0.803371 | 3.599104e-49 | -8.615850e-47 |
Msa1258600 | Msa1433650 | -0.806816 | 6.845857e-50 | -8.615850e-47 |
Msa1258600 | Msa1439160 | -0.810489 | 1.123714e-50 | -8.615850e-47 |
Msa1258600 | Msa1449510 | -0.821528 | 3.849585e-53 | -8.615850e-47 |
Msa1258600 | Msa1459930 | 0.809539 | 1.800295e-50 | -8.615850e-47 |
Msa0369660 | Msa1258600 | 0.865714 | 4.832361e-65 | -8.615850e-47 |
Msa0378570 | Msa1258600 | -0.806714 | 7.191626e-50 | -8.615850e-47 |
Msa0384130 | Msa1258600 | -0.812501 | 4.107500e-51 | -8.615850e-47 |
Msa0384220 | Msa1258600 | 0.864681 | 1.020558e-64 | -8.615850e-47 |
Msa0385870 | Msa1258600 | -0.817779 | 2.762234e-52 | -8.615850e-47 |
Msa0387180 | Msa1258600 | 0.880693 | 4.448725e-70 | -8.615850e-47 |
Msa0412820 | Msa1258600 | 0.817058 | 4.014108e-52 | -8.615850e-47 |
Msa0417060 | Msa1258600 | 0.833762 | 4.427225e-56 | -8.615850e-47 |
Msa0421690 | Msa1258600 | 0.855517 | 5.981192e-62 | -8.615850e-47 |
Msa0427850 | Msa1258600 | 0.862970 | 3.474817e-64 | -8.615850e-47 |
Msa0434890 | Msa1258600 | 0.817285 | 3.569532e-52 | -8.615850e-47 |
Msa0451370 | Msa1258600 | -0.800249 | 1.574688e-48 | -8.615850e-47 |
Msa0457530 | Msa1258600 | 0.802995 | 4.304861e-49 | -8.615850e-47 |
Msa0463890 | Msa1258600 | 0.877765 | 4.834033e-69 | -8.615850e-47 |
Msa0465420 | Msa1258600 | 0.835035 | 2.121491e-56 | -8.615850e-47 |
Msa0468050 | Msa1258600 | 0.878726 | 2.224631e-69 | -8.615850e-47 |
Msa0474080 | Msa1258600 | 0.853781 | 1.904553e-61 | -8.615850e-47 |
Msa0478750 | Msa1258600 | -0.823469 | 1.361824e-53 | -8.615850e-47 |
Msa0481580 | Msa1258600 | -0.806555 | 7.771508e-50 | -8.615850e-47 |
Msa0482360 | Msa1258600 | 0.926950 | 2.313659e-91 | -8.615850e-47 |
Msa0982340 | Msa1258600 | 0.828487 | 8.747750e-55 | -8.615850e-47 |
Msa0985980 | Msa1258600 | -0.806288 | 8.845996e-50 | -8.615850e-47 |
Msa1014530 | Msa1258600 | -0.809183 | 2.146010e-50 | -8.615850e-47 |
Msa1030380 | Msa1258600 | 0.805179 | 1.512784e-49 | -8.615850e-47 |
Msa1031220 | Msa1258600 | -0.800479 | 1.413917e-48 | -8.615850e-47 |
Msa1034870 | Msa1258600 | 0.867331 | 1.480413e-65 | -8.615850e-47 |
Msa1041620 | Msa1258600 | -0.823858 | 1.104763e-53 | -8.615850e-47 |
Msa1049810 | Msa1258600 | 0.814584 | 1.430143e-51 | -8.615850e-47 |
Msa1050320 | Msa1258600 | -0.813768 | 2.165769e-51 | -8.615850e-47 |
Msa1069390 | Msa1258600 | 0.802695 | 4.966270e-49 | -8.615850e-47 |
Msa1070020 | Msa1258600 | -0.801171 | 1.021259e-48 | -8.615850e-47 |
Msa1074910 | Msa1258600 | 0.834211 | 3.416457e-56 | -8.615850e-47 |
Msa1081650 | Msa1258600 | -0.841322 | 5.097860e-58 | -8.615850e-47 |
Msa1085860 | Msa1258600 | 0.806974 | 6.337171e-50 | -8.615850e-47 |
Msa1106570 | Msa1258600 | -0.800688 | 1.281376e-48 | -8.615850e-47 |
Msa0244370 | Msa1258600 | -0.821596 | 3.711489e-53 | -8.615850e-47 |
Msa0249670 | Msa1258600 | -0.823348 | 1.454093e-53 | -8.615850e-47 |
Msa0258280 | Msa1258600 | -0.806216 | 9.160661e-50 | -8.615850e-47 |
Msa0258960 | Msa1258600 | -0.843180 | 1.642107e-58 | -8.615850e-47 |
Msa0273420 | Msa1258600 | 0.854295 | 1.354054e-61 | -8.615850e-47 |
Msa0275890 | Msa1258600 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
Msa0282880 | Msa1258600 | -0.822091 | 2.850886e-53 | -8.615850e-47 |
Msa0288270 | Msa1258600 | -0.800580 | 1.348218e-48 | -8.615850e-47 |
Msa0288280 | Msa1258600 | -0.829737 | 4.354131e-55 | -8.615850e-47 |
Msa0294650 | Msa1258600 | -0.803631 | 3.179468e-49 | -8.615850e-47 |
Msa0298180 | Msa1258600 | -0.801522 | 8.652876e-49 | -8.615850e-47 |
Msa0313050 | Msa1258600 | 0.804515 | 2.082122e-49 | -8.615850e-47 |
Msa0313680 | Msa1258600 | 0.867660 | 1.161769e-65 | -8.615850e-47 |
Msa0315390 | Msa1258600 | -0.805130 | 1.548850e-49 | -8.615850e-47 |
Msa0321180 | Msa1258600 | -0.811601 | 6.453929e-51 | -8.615850e-47 |
Msa0321200 | Msa1258600 | -0.814843 | 1.253095e-51 | -8.615850e-47 |
Msa0361040 | Msa1258600 | -0.800849 | 1.188049e-48 | -8.615850e-47 |
Msa1115760 | Msa1258600 | 0.812689 | 3.737121e-51 | -8.615850e-47 |
Msa1129130 | Msa1258600 | -0.817633 | 2.980303e-52 | -8.615850e-47 |
Msa1129470 | Msa1258600 | -0.830353 | 3.080018e-55 | -8.615850e-47 |
Msa1151970 | Msa1258600 | -0.803203 | 3.899481e-49 | -8.615850e-47 |
Msa1157200 | Msa1258600 | 0.803653 | 3.146019e-49 | -8.615850e-47 |
Msa1164670 | Msa1258600 | 0.830173 | 3.408475e-55 | -8.615850e-47 |
Msa1166520 | Msa1258600 | -0.812186 | 4.811905e-51 | -8.615850e-47 |
Msa1171720 | Msa1258600 | 0.809121 | 2.212428e-50 | -8.615850e-47 |
Msa1174450 | Msa1258600 | 0.823905 | 1.076602e-53 | -8.615850e-47 |
Msa1177360 | Msa1258600 | -0.806654 | 7.406717e-50 | -8.615850e-47 |
Msa1186010 | Msa1258600 | -0.810569 | 1.080027e-50 | -8.615850e-47 |
Msa1187160 | Msa1258600 | 0.806221 | 9.138308e-50 | -8.615850e-47 |
Msa1192790 | Msa1258600 | -0.811717 | 6.087185e-51 | -8.615850e-47 |
Msa1203090 | Msa1258600 | -0.833187 | 6.157600e-56 | -8.615850e-47 |
Msa1203210 | Msa1258600 | -0.820850 | 5.517129e-53 | -8.615850e-47 |
Msa1203720 | Msa1258600 | -0.814358 | 1.604428e-51 | -8.615850e-47 |
Msa1207000 | Msa1258600 | 0.887024 | 2.050838e-72 | -8.615850e-47 |
Msa1207090 | Msa1258600 | 0.882534 | 9.609366e-71 | -8.615850e-47 |
Msa1220390 | Msa1258600 | -0.800632 | 1.315621e-48 | -8.615850e-47 |
Msa1223600 | Msa1258600 | -0.823618 | 1.256878e-53 | -8.615850e-47 |
Msa0484240 | Msa1258600 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
Msa0498320 | Msa1258600 | -0.812189 | 4.805251e-51 | -8.615850e-47 |
Msa0504430 | Msa1258600 | 0.822341 | 2.494727e-53 | -8.615850e-47 |
Msa0509420 | Msa1258600 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
Msa0511280 | Msa1258600 | 0.822042 | 2.927454e-53 | -8.615850e-47 |
Msa0511380 | Msa1258600 | 0.807974 | 3.888785e-50 | -8.615850e-47 |
Msa0513500 | Msa1258600 | -0.803752 | 3.000844e-49 | -8.615850e-47 |
Msa0522830 | Msa1258600 | -0.832418 | 9.561818e-56 | -8.615850e-47 |
Msa0523400 | Msa1258600 | -0.810877 | 9.261946e-51 | -8.615850e-47 |
Msa0532910 | Msa1258600 | -0.834517 | 2.862656e-56 | -8.615850e-47 |
Msa0545910 | Msa1258600 | -0.819538 | 1.101697e-52 | -8.615850e-47 |
Msa0550760 | Msa1258600 | -0.802465 | 5.538704e-49 | -8.615850e-47 |
Msa0553940 | Msa1258600 | -0.819961 | 8.822551e-53 | -8.615850e-47 |
Msa0564000 | Msa1258600 | -0.806612 | 7.557800e-50 | -8.615850e-47 |
Msa0587060 | Msa1258600 | -0.844116 | 9.227439e-59 | -8.615850e-47 |
Msa0592020 | Msa1258600 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
Msa0597300 | Msa1258600 | -0.823870 | 1.097544e-53 | -8.615850e-47 |
Msa0598610 | Msa1258600 | -0.804332 | 2.272752e-49 | -8.615850e-47 |
Msa0854860 | Msa1258600 | 0.809789 | 1.590199e-50 | -8.615850e-47 |
Msa0862750 | Msa1258600 | -0.835380 | 1.735435e-56 | -8.615850e-47 |
Msa0863780 | Msa1258600 | -0.822606 | 2.165442e-53 | -8.615850e-47 |
Msa0875130 | Msa1258600 | -0.831319 | 1.786070e-55 | -8.615850e-47 |
Msa0880370 | Msa1258600 | -0.810282 | 1.245816e-50 | -8.615850e-47 |
Msa0882340 | Msa1258600 | -0.819428 | 1.167339e-52 | -8.615850e-47 |
Msa0882360 | Msa1258600 | 0.807546 | 4.794632e-50 | -8.615850e-47 |
Msa0883880 | Msa1258600 | -0.805552 | 1.263100e-49 | -8.615850e-47 |
Msa0894580 | Msa1258600 | -0.816103 | 6.571345e-52 | -8.615850e-47 |
Msa0896990 | Msa1258600 | 0.815698 | 8.090146e-52 | -8.615850e-47 |
Msa0902810 | Msa1258600 | -0.811859 | 5.671565e-51 | -8.615850e-47 |
Msa0911440 | Msa1258600 | -0.815687 | 8.135030e-52 | -8.615850e-47 |
Msa0911490 | Msa1258600 | -0.805123 | 1.554138e-49 | -8.615850e-47 |
Msa0933050 | Msa1258600 | -0.832616 | 8.538660e-56 | -8.615850e-47 |
Msa0946570 | Msa1258600 | -0.814078 | 1.850583e-51 | -8.615850e-47 |
Msa0947420 | Msa1258600 | 0.827731 | 1.330361e-54 | -8.615850e-47 |
Msa0962260 | Msa1258600 | 0.810012 | 1.424116e-50 | -8.615850e-47 |
Msa0970940 | Msa1258600 | -0.820614 | 6.251228e-53 | -8.615850e-47 |
Msa0976950 | Msa1258600 | -0.849064 | 4.109996e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1258600 | MtrunA17_Chr4g0057571 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
Msa1258600 | MtrunA17_Chr5g0416121 | 35.556 | 405 | 225 | 4 | 47 | 420 | 40 | 439 | 7.00e-88 | 274 |
Msa1258600 | MtrunA17_Chr3g0144711 | 22.515 | 342 | 217 | 6 | 85 | 405 | 1 | 315 | 1.07e-23 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1258600 | AT3G48530.1 | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0.0 | 613 |
Msa1258600 | AT1G69800.1 | 37.221 | 403 | 218 | 4 | 45 | 416 | 35 | 433 | 3.19e-84 | 265 |
Msa1258600 | AT1G69800.2 | 37.221 | 403 | 218 | 4 | 45 | 416 | 64 | 462 | 5.56e-84 | 265 |
Msa1258600 | AT1G69800.3 | 35.455 | 330 | 183 | 2 | 45 | 344 | 35 | 364 | 1.62e-64 | 212 |
Find 120 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGAACCCCACGGCTATTT+TGG | 0.161714 | 8_2:-59828532 | Msa1258600:CDS |
CTATAATCATGATAGATTTC+TGG | 0.217599 | 8_2:+59829042 | None:intergenic |
GGATCTGCAGCGACAACTTC+TGG | 0.254340 | 8_2:-59829843 | Msa1258600:CDS |
GGATGAGAGTTGAAGATCTA+TGG | 0.266856 | 8_2:-59830866 | Msa1258600:CDS |
TCAAAGTTTGACAGAACTTA+TGG | 0.274031 | 8_2:+59828242 | None:intergenic |
ATGGGCTCCGTTTCTTGCTT+TGG | 0.280669 | 8_2:-59829646 | Msa1258600:CDS |
TTCAACTCTCATCCCAAGTT+TGG | 0.288163 | 8_2:+59830875 | None:intergenic |
CAGAAATCTATCATGATTAT+AGG | 0.291433 | 8_2:-59829041 | Msa1258600:intron |
TTAGTGTGATTAGTCCTTCA+AGG | 0.332347 | 8_2:+59828578 | None:intergenic |
ACTTCAATGGTTCGAAAGTT+GGG | 0.335155 | 8_2:-59829478 | Msa1258600:CDS |
GAGAAAAGAAGAGGGAATAA+TGG | 0.336001 | 8_2:-59830937 | Msa1258600:CDS |
CAAGCATTAAGTTTGTCATT+AGG | 0.345513 | 8_2:+59830819 | None:intergenic |
TCTTTCCGCTAGTCATAATA+AGG | 0.356461 | 8_2:+59828183 | None:intergenic |
CTCATCCCAAGTTTGGCTTC+TGG | 0.357377 | 8_2:+59830882 | None:intergenic |
CACACCTTGATGATCTGTTT+TGG | 0.359578 | 8_2:+59829414 | None:intergenic |
AAACAGGTTCGAGATATTTC+AGG | 0.361042 | 8_2:-59829678 | Msa1258600:intron |
TTGACAAAGAGCAAATTCAT+AGG | 0.378131 | 8_2:-59828627 | Msa1258600:CDS |
TATAATCATGATAGATTTCT+GGG | 0.381852 | 8_2:+59829043 | None:intergenic |
TCATCTCTTTAAATGCTTGA+AGG | 0.382534 | 8_2:+59829163 | None:intergenic |
ATCGGAATAGTTGAGTTTGC+TGG | 0.385140 | 8_2:-59830317 | Msa1258600:CDS |
TCAATCCAACTAGCATCTTC+AGG | 0.389432 | 8_2:+59830347 | None:intergenic |
ATTCTAACATTAGTTAAAAC+AGG | 0.399857 | 8_2:+59828297 | None:intergenic |
GTGAATTCATTACATGCAAA+AGG | 0.403501 | 8_2:-59828681 | Msa1258600:CDS |
GACTTCAATGGTTCGAAAGT+TGG | 0.404591 | 8_2:-59829479 | Msa1258600:CDS |
TCTTTAAATGCTTGAAGGAC+TGG | 0.413459 | 8_2:+59829168 | None:intergenic |
AGTTTGGCTTCTGGACTCCT+TGG | 0.419299 | 8_2:+59830891 | None:intergenic |
GGCAAAGGAAAAGCAGAAAC+AGG | 0.426999 | 8_2:+59830783 | None:intergenic |
TAATGAATTCACTTGACATT+GGG | 0.434316 | 8_2:+59828692 | None:intergenic |
TCCCTCTACCTGCTAATAGC+AGG | 0.435441 | 8_2:-59828489 | Msa1258600:CDS |
AGTTTGCTGGAATTGTTGTA+TGG | 0.438748 | 8_2:-59830304 | Msa1258600:CDS |
GGCTGAAGCTGTGAAAATAT+TGG | 0.439718 | 8_2:-59830414 | Msa1258600:CDS |
GTTGGAGTGGATGGACTCCT+AGG | 0.442102 | 8_2:+59829936 | None:intergenic |
AGGAGTCCAGAAGCCAAACT+TGG | 0.448058 | 8_2:-59830888 | Msa1258600:CDS |
TTATTATGGGACAATGTGTT+GGG | 0.452049 | 8_2:-59831042 | Msa1258600:five_prime_UTR |
ATTATTATGGGACAATGTGT+TGG | 0.452353 | 8_2:-59831043 | Msa1258600:five_prime_UTR |
TTGGAGTGGATGGACTCCTA+GGG | 0.452562 | 8_2:+59829937 | None:intergenic |
GCTCGAGAACTCGAAGCCTT+AGG | 0.456172 | 8_2:-59829870 | Msa1258600:CDS |
CTTGCACTGGTTGGAGTGGA+TGG | 0.469031 | 8_2:+59829927 | None:intergenic |
CAGAATGTGCCGGACTTCAA+TGG | 0.469578 | 8_2:-59829491 | Msa1258600:CDS |
AATAAAATCAGATGCTACCT+TGG | 0.469606 | 8_2:-59830435 | Msa1258600:CDS |
GACCTCCGTTAGAAGCTACT+TGG | 0.479934 | 8_2:-59828734 | Msa1258600:CDS |
AGTAGCTTCTAACGGAGGTC+AGG | 0.486459 | 8_2:+59828737 | None:intergenic |
GAGTGTTCCTGTGGTAGACT+TGG | 0.493238 | 8_2:-59829568 | Msa1258600:CDS |
GCTATTGCAGCCGCAGCAAA+CGG | 0.494235 | 8_2:-59829903 | Msa1258600:CDS |
GAACTCGAAGCCTTAGGCCT+CGG | 0.497616 | 8_2:-59829864 | Msa1258600:CDS |
GACGATGATGGGAACCTTGA+AGG | 0.502311 | 8_2:-59828592 | Msa1258600:CDS |
CGCTGCAGATCCGAGGCCTA+AGG | 0.503192 | 8_2:+59829854 | None:intergenic |
GTCTATGTTGTGGACGATGA+TGG | 0.505650 | 8_2:-59828604 | Msa1258600:CDS |
CCCTCTACCTGCTAATAGCA+GGG | 0.507334 | 8_2:-59828488 | Msa1258600:CDS |
GCAATAGCACTTGCACTGGT+TGG | 0.511188 | 8_2:+59829918 | None:intergenic |
TGTTAAACCCTGCTATTAGC+AGG | 0.522009 | 8_2:+59828481 | None:intergenic |
GGTGCATCAACATCCACAAC+AGG | 0.523558 | 8_2:+59830368 | None:intergenic |
ACCAACATCAGATAGTTCCT+TGG | 0.525523 | 8_2:+59829452 | None:intergenic |
ACCCGCCGTGATTCATATGT+TGG | 0.528785 | 8_2:-59829514 | Msa1258600:CDS |
AACAGGTTCGAGATATTTCA+GGG | 0.530914 | 8_2:-59829677 | Msa1258600:intron |
ATGCACCTGAAGATGCTAGT+TGG | 0.531504 | 8_2:-59830352 | Msa1258600:CDS |
TGAATTCATTACATGCAAAA+GGG | 0.536868 | 8_2:-59828680 | Msa1258600:CDS |
CCTGTGGTAGACTTGGGTGC+TGG | 0.537100 | 8_2:-59829561 | Msa1258600:CDS |
ACCCTGCTATTAGCAGGTAG+AGG | 0.541141 | 8_2:+59828487 | None:intergenic |
AAACTACCTTGGTTTGAAGC+AGG | 0.544975 | 8_2:+59830762 | None:intergenic |
CAGGTTGAAGATGTGTATCT+AGG | 0.549376 | 8_2:-59828357 | Msa1258600:three_prime_UTR |
ACTTTCGAACCATTGAAGTC+CGG | 0.551209 | 8_2:+59829482 | None:intergenic |
TTCAAGCATTTAAAGAGATG+AGG | 0.552251 | 8_2:-59829161 | Msa1258600:CDS |
GTAATGAATTCACTTGACAT+TGG | 0.553550 | 8_2:+59828691 | None:intergenic |
GATGAGAGTTGAAGATCTAT+GGG | 0.553732 | 8_2:-59830865 | Msa1258600:CDS |
GATCTCTCCAAAGCAAGAAA+CGG | 0.557531 | 8_2:+59829639 | None:intergenic |
CTTCTCCAAGTAGCTTCTAA+CGG | 0.558499 | 8_2:+59828729 | None:intergenic |
TGACAGAACTATTACAGTGA+AGG | 0.559685 | 8_2:-59828764 | Msa1258600:intron |
CCTTGGTTTGAAGCAGGCAA+AGG | 0.559732 | 8_2:+59830768 | None:intergenic |
AGAGGTGGCACCACGGCAGT+TGG | 0.561682 | 8_2:-59829105 | Msa1258600:CDS |
CCCTGCTATTAGCAGGTAGA+GGG | 0.561914 | 8_2:+59828488 | None:intergenic |
GTGGATGGACTCCTAGGGGA+TGG | 0.565217 | 8_2:+59829942 | None:intergenic |
ACCAAGGAACTATCTGATGT+TGG | 0.572252 | 8_2:-59829453 | Msa1258600:CDS |
CATATGTTGGCAGAATGTGC+CGG | 0.573538 | 8_2:-59829501 | Msa1258600:CDS |
GGCTGCAATAGCACTTGCAC+TGG | 0.573713 | 8_2:+59829914 | None:intergenic |
TATTCTGAGTGCACCTGTTG+TGG | 0.573842 | 8_2:-59830381 | Msa1258600:CDS |
CTTAGAAAGCAGCAAGAGCA+TGG | 0.576526 | 8_2:+59829602 | None:intergenic |
CACAGAGAGAGAAAAGAAGA+GGG | 0.578839 | 8_2:-59830945 | Msa1258600:CDS |
ATATTTCAGGGACATTCCGA+TGG | 0.579686 | 8_2:-59829665 | Msa1258600:CDS |
AATTCATAGGGTCTATGTTG+TGG | 0.580570 | 8_2:-59828614 | Msa1258600:CDS |
CCTTTGCCTGCTTCAAACCA+AGG | 0.581002 | 8_2:-59830768 | Msa1258600:intron |
CTTCAATGGTTCGAAAGTTG+GGG | 0.582143 | 8_2:-59829477 | Msa1258600:CDS |
ACACAGAGAGAGAAAAGAAG+AGG | 0.584820 | 8_2:-59830946 | Msa1258600:CDS |
TGACAAAGAGCAAATTCATA+GGG | 0.586419 | 8_2:-59828626 | Msa1258600:CDS |
GAAATCACCAAAATAGCCGT+GGG | 0.590135 | 8_2:+59828525 | None:intergenic |
GATGGACTCCTAGGGGATGG+AGG | 0.592826 | 8_2:+59829945 | None:intergenic |
AGAAATCACCAAAATAGCCG+TGG | 0.598829 | 8_2:+59828524 | None:intergenic |
AGCACTTGCACTGGTTGGAG+TGG | 0.599023 | 8_2:+59829923 | None:intergenic |
GGGGTGCCTGTAATCAAAAG+AGG | 0.599309 | 8_2:-59829123 | Msa1258600:CDS |
GTTCACCTTATTATGACTAG+CGG | 0.600070 | 8_2:-59828188 | Msa1258600:three_prime_UTR |
GGAGTCCAGAAGCCAAACTT+GGG | 0.600493 | 8_2:-59830887 | Msa1258600:CDS |
GCCAACATATGAATCACGGC+GGG | 0.600876 | 8_2:+59829513 | None:intergenic |
AGTCTGAACCTCCATCCCCT+AGG | 0.601038 | 8_2:-59829953 | Msa1258600:CDS |
AGAAGAGGGAATAATGGCAA+TGG | 0.605880 | 8_2:-59830931 | Msa1258600:CDS |
TCTATGTTGTGGACGATGAT+GGG | 0.613189 | 8_2:-59828603 | Msa1258600:CDS |
AAGCAAGAAACGGAGCCCAT+CGG | 0.613620 | 8_2:+59829649 | None:intergenic |
AGATCTATGGGATGTTCAAG+AGG | 0.614406 | 8_2:-59830853 | Msa1258600:CDS |
CACTAAGAGATATCATCTCA+AGG | 0.615021 | 8_2:-59828561 | Msa1258600:CDS |
TTCTGCCAACATATGAATCA+CGG | 0.617203 | 8_2:+59829509 | None:intergenic |
AGTGTTCCTGTGGTAGACTT+GGG | 0.619646 | 8_2:-59829567 | Msa1258600:CDS |
GTTCGAAAGTTGGGGAACCA+AGG | 0.622320 | 8_2:-59829469 | Msa1258600:CDS |
CTACAATGAGAGAGATGCCA+AGG | 0.623153 | 8_2:-59830908 | Msa1258600:CDS |
CCAGCACCCAAGTCTACCAC+AGG | 0.626540 | 8_2:+59829561 | None:intergenic |
AAGTTGTCGCTGCAGATCCG+AGG | 0.626836 | 8_2:+59829847 | None:intergenic |
AGTTGGATTGATAGATACAT+CGG | 0.633207 | 8_2:-59830335 | Msa1258600:CDS |
TATTTCAGGGACATTCCGAT+GGG | 0.633257 | 8_2:-59829664 | Msa1258600:CDS |
AAAAGTATTTCCGTTTGCTG+CGG | 0.635232 | 8_2:+59829893 | None:intergenic |
CAAAATGAAGAGTGTTCCTG+TGG | 0.635403 | 8_2:-59829577 | Msa1258600:CDS |
TGGAGTGGATGGACTCCTAG+GGG | 0.642969 | 8_2:+59829938 | None:intergenic |
GTGCCTGTAATCAAAAGAGG+TGG | 0.647223 | 8_2:-59829120 | Msa1258600:CDS |
GCTTATATTACCAACTGCCG+TGG | 0.652654 | 8_2:+59829095 | None:intergenic |
GACGCCAAAACAGATCATCA+AGG | 0.655091 | 8_2:-59829418 | Msa1258600:intron |
TGAACTTTATAAGAACACCA+AGG | 0.657415 | 8_2:-59829793 | Msa1258600:intron |
ATAGCAGGGTTTAACAGACA+TGG | 0.671919 | 8_2:-59828474 | Msa1258600:exon |
CTCCAAGTAGCTTCTAACGG+AGG | 0.681992 | 8_2:+59828732 | None:intergenic |
AGGCTAGTACATGAACCCCA+CGG | 0.706623 | 8_2:-59828541 | Msa1258600:CDS |
ATAATCATGATAGATTTCTG+GGG | 0.708208 | 8_2:+59829044 | None:intergenic |
TGCCAACATATGAATCACGG+CGG | 0.717560 | 8_2:+59829512 | None:intergenic |
AATCAAAAGAGGTGGCACCA+CGG | 0.732628 | 8_2:-59829112 | Msa1258600:CDS |
AAATCACCAAAATAGCCGTG+GGG | 0.760400 | 8_2:+59828526 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTCAGTTTATTATTAT+GGG | - | chr8_2:59828174-59828193 | Msa1258600:three_prime_UTR | 10.0% |
!! | AAAAATATGTATTTATCTTC+AGG | - | chr8_2:59830853-59830872 | Msa1258600:CDS | 15.0% |
!!! | ATTTTGCAAAATTTACATCA+TGG | - | chr8_2:59828623-59828642 | Msa1258600:CDS | 20.0% |
!!! | TTAATACATGTACTTTTTGT+TGG | - | chr8_2:59829128-59829147 | Msa1258600:CDS | 20.0% |
!! | TATAATCATGATAGATTTCT+GGG | + | chr8_2:59830189-59830208 | None:intergenic | 20.0% |
!! | TTTCATTACTTAATACTCAT+TGG | - | chr8_2:59830430-59830449 | Msa1258600:CDS | 20.0% |
!!! | TTTTTGAAATAATTCTTCAG+AGG | - | chr8_2:59830823-59830842 | Msa1258600:CDS | 20.0% |
!! | ATTCTAACATTAGTTAAAAC+AGG | + | chr8_2:59830935-59830954 | None:intergenic | 20.0% |
!!! | TGTTTTAACTAATGTTAGAA+TGG | - | chr8_2:59830934-59830953 | Msa1258600:CDS | 20.0% |
!!! | GTTTTAACTAATGTTAGAAT+GGG | - | chr8_2:59830935-59830954 | Msa1258600:CDS | 20.0% |
! | ATGAAAATTATGTGCATGTT+TGG | - | chr8_2:59828561-59828580 | Msa1258600:CDS | 25.0% |
! | ACACAAAATAACACATCAAT+TGG | + | chr8_2:59828710-59828729 | None:intergenic | 25.0% |
!!! | TGTGTGTGTATGTTTTTTTT+AGG | - | chr8_2:59828725-59828744 | Msa1258600:CDS | 25.0% |
! | TCACTTTCAGAATAAAAATG+AGG | - | chr8_2:59828995-59829014 | Msa1258600:intron | 25.0% |
! | AGAAGGATGAATTTAATACA+TGG | - | chr8_2:59829152-59829171 | Msa1258600:CDS | 25.0% |
!! | TGGATTATTTCATTCTTTTC+AGG | - | chr8_2:59830024-59830043 | Msa1258600:intron | 25.0% |
! | ATAATCATGATAGATTTCTG+GGG | + | chr8_2:59830188-59830207 | None:intergenic | 25.0% |
! | CTATAATCATGATAGATTTC+TGG | + | chr8_2:59830190-59830209 | None:intergenic | 25.0% |
! | CAGAAATCTATCATGATTAT+AGG | - | chr8_2:59830188-59830207 | Msa1258600:intron | 25.0% |
! | GAAAAAAGATATTAGCAATG+TGG | + | chr8_2:59830389-59830408 | None:intergenic | 25.0% |
! | TAATGAATTCACTTGACATT+GGG | + | chr8_2:59830540-59830559 | None:intergenic | 25.0% |
! | TGAATTCATTACATGCAAAA+GGG | - | chr8_2:59830549-59830568 | Msa1258600:intron | 25.0% |
!!! | TATTTTGGTGATTTCTTTGA+TGG | - | chr8_2:59830712-59830731 | Msa1258600:intron | 25.0% |
!! | CTTTTATGTACTGTAAATTC+TGG | - | chr8_2:59830959-59830978 | Msa1258600:exon | 25.0% |
ATTATTATGGGACAATGTGT+TGG | - | chr8_2:59828186-59828205 | Msa1258600:three_prime_UTR | 30.0% | |
TTATTATGGGACAATGTGTT+GGG | - | chr8_2:59828187-59828206 | Msa1258600:three_prime_UTR | 30.0% | |
CAAGCATTAAGTTTGTCATT+AGG | + | chr8_2:59828413-59828432 | None:intergenic | 30.0% | |
ATATACACACTAAACTACCT+TGG | + | chr8_2:59828481-59828500 | None:intergenic | 30.0% | |
TATATGTATGTATGTCTGTG+TGG | - | chr8_2:59828496-59828515 | Msa1258600:CDS | 30.0% | |
! | CATGCACATAATTTTCATCT+GGG | + | chr8_2:59828559-59828578 | None:intergenic | 30.0% |
! | ACATGCACATAATTTTCATC+TGG | + | chr8_2:59828560-59828579 | None:intergenic | 30.0% |
TTGCAAAATTTACATCATGG+TGG | - | chr8_2:59828626-59828645 | Msa1258600:CDS | 30.0% | |
AATAAAATCAGATGCTACCT+TGG | - | chr8_2:59828794-59828813 | Msa1258600:intron | 30.0% | |
AGTTGGATTGATAGATACAT+CGG | - | chr8_2:59828894-59828913 | Msa1258600:intron | 30.0% | |
TTGCAAGTTTCAGATTCATA+TGG | + | chr8_2:59829034-59829053 | None:intergenic | 30.0% | |
!! | ATGTACTTTTTGTTGGTAGA+AGG | - | chr8_2:59829135-59829154 | Msa1258600:CDS | 30.0% |
GAAAATCACTTCAATAGAAC+AGG | + | chr8_2:59829209-59829228 | None:intergenic | 30.0% | |
! | AGCTAATGTGATAATGTTGT+TGG | - | chr8_2:59829252-59829271 | Msa1258600:intron | 30.0% |
TGAACTTTATAAGAACACCA+AGG | - | chr8_2:59829436-59829455 | Msa1258600:CDS | 30.0% | |
AATACAAACTCATTAGTAGC+TGG | + | chr8_2:59829503-59829522 | None:intergenic | 30.0% | |
ACACACATTTAAGAAATGCA+GGG | + | chr8_2:59829926-59829945 | None:intergenic | 30.0% | |
CTTAAATGTGTGTGCATATA+TGG | - | chr8_2:59829933-59829952 | Msa1258600:CDS | 30.0% | |
AAGCTTACTTTACTTGAAAG+GGG | + | chr8_2:59829981-59830000 | None:intergenic | 30.0% | |
CAAGCTTACTTTACTTGAAA+GGG | + | chr8_2:59829982-59830001 | None:intergenic | 30.0% | |
ACAAGCTTACTTTACTTGAA+AGG | + | chr8_2:59829983-59830002 | None:intergenic | 30.0% | |
!!! | TCATTCTTTTCAGGTTTATG+AGG | - | chr8_2:59830033-59830052 | Msa1258600:intron | 30.0% |
TCATCTCTTTAAATGCTTGA+AGG | + | chr8_2:59830069-59830088 | None:intergenic | 30.0% | |
TTCAAGCATTTAAAGAGATG+AGG | - | chr8_2:59830068-59830087 | Msa1258600:intron | 30.0% | |
TTAAAGAGATGAGGAAAAAG+AGG | - | chr8_2:59830077-59830096 | Msa1258600:intron | 30.0% | |
TAAAGAGATGAGGAAAAAGA+GGG | - | chr8_2:59830078-59830097 | Msa1258600:intron | 30.0% | |
! | ATCACAATTTAAAACCTCTG+TGG | + | chr8_2:59830221-59830240 | None:intergenic | 30.0% |
AACATTTCTCAGCAAAATCA+AGG | + | chr8_2:59830262-59830281 | None:intergenic | 30.0% | |
CTGAGAAATGTTGTCAAATA+TGG | - | chr8_2:59830270-59830289 | Msa1258600:intron | 30.0% | |
! | CTAGACACAGTTCTAATAAA+AGG | + | chr8_2:59830365-59830384 | None:intergenic | 30.0% |
GTAATGAATTCACTTGACAT+TGG | + | chr8_2:59830541-59830560 | None:intergenic | 30.0% | |
GTGAATTCATTACATGCAAA+AGG | - | chr8_2:59830548-59830567 | Msa1258600:intron | 30.0% | |
TTGACAAAGAGCAAATTCAT+AGG | - | chr8_2:59830602-59830621 | Msa1258600:intron | 30.0% | |
TGACAAAGAGCAAATTCATA+GGG | - | chr8_2:59830603-59830622 | Msa1258600:intron | 30.0% | |
TCAAAGTTTGACAGAACTTA+TGG | + | chr8_2:59830990-59831009 | None:intergenic | 30.0% | |
GAGAAAAGAAGAGGGAATAA+TGG | - | chr8_2:59828292-59828311 | Msa1258600:three_prime_UTR | 35.0% | |
GATGAGAGTTGAAGATCTAT+GGG | - | chr8_2:59828364-59828383 | Msa1258600:three_prime_UTR | 35.0% | |
!! | TGATTGGTTTGTCAGAATCA+TGG | + | chr8_2:59828656-59828675 | None:intergenic | 35.0% |
!! | AGTTTGCTGGAATTGTTGTA+TGG | - | chr8_2:59828925-59828944 | Msa1258600:intron | 35.0% |
! | TGTTGTATGGATTTTGCATC+AGG | - | chr8_2:59828938-59828957 | Msa1258600:intron | 35.0% |
!! | AAAAGTATTTCCGTTTGCTG+CGG | + | chr8_2:59829339-59829358 | None:intergenic | 35.0% |
!!! | AACTTCTGGAAACTTTTTCG+AGG | - | chr8_2:59829400-59829419 | Msa1258600:intron | 35.0% |
TAGACATTGCAAAACAACCT+TGG | + | chr8_2:59829456-59829475 | None:intergenic | 35.0% | |
!!! | TAGCTAACTTTTTCGCAAAC+AGG | - | chr8_2:59829535-59829554 | Msa1258600:CDS | 35.0% |
AAACAGGTTCGAGATATTTC+AGG | - | chr8_2:59829551-59829570 | Msa1258600:CDS | 35.0% | |
AACAGGTTCGAGATATTTCA+GGG | - | chr8_2:59829552-59829571 | Msa1258600:CDS | 35.0% | |
TTCTGCCAACATATGAATCA+CGG | + | chr8_2:59829723-59829742 | None:intergenic | 35.0% | |
ACTTCAATGGTTCGAAAGTT+GGG | - | chr8_2:59829751-59829770 | Msa1258600:intron | 35.0% | |
TGCAGAATTCATACTTGACA+AGG | + | chr8_2:59829873-59829892 | None:intergenic | 35.0% | |
CACACACATTTAAGAAATGC+AGG | + | chr8_2:59829927-59829946 | None:intergenic | 35.0% | |
GATCTTGATGAACTTGACAA+TGG | - | chr8_2:59830004-59830023 | Msa1258600:intron | 35.0% | |
TCTTTAAATGCTTGAAGGAC+TGG | + | chr8_2:59830064-59830083 | None:intergenic | 35.0% | |
TGACAGAACTATTACAGTGA+AGG | - | chr8_2:59830465-59830484 | Msa1258600:intron | 35.0% | |
AATTCATAGGGTCTATGTTG+TGG | - | chr8_2:59830615-59830634 | Msa1258600:intron | 35.0% | |
! | TTAGTGTGATTAGTCCTTCA+AGG | + | chr8_2:59830654-59830673 | None:intergenic | 35.0% |
CACTAAGAGATATCATCTCA+AGG | - | chr8_2:59830668-59830687 | Msa1258600:intron | 35.0% | |
GTTCACCTTATTATGACTAG+CGG | - | chr8_2:59831041-59831060 | Msa1258600:five_prime_UTR | 35.0% | |
TCTTTCCGCTAGTCATAATA+AGG | + | chr8_2:59831049-59831068 | None:intergenic | 35.0% | |
ACACAGAGAGAGAAAAGAAG+AGG | - | chr8_2:59828283-59828302 | Msa1258600:three_prime_UTR | 40.0% | |
CACAGAGAGAGAAAAGAAGA+GGG | - | chr8_2:59828284-59828303 | Msa1258600:three_prime_UTR | 40.0% | |
AGAAGAGGGAATAATGGCAA+TGG | - | chr8_2:59828298-59828317 | Msa1258600:three_prime_UTR | 40.0% | |
TTCAACTCTCATCCCAAGTT+TGG | + | chr8_2:59828357-59828376 | None:intergenic | 40.0% | |
GGATGAGAGTTGAAGATCTA+TGG | - | chr8_2:59828363-59828382 | Msa1258600:three_prime_UTR | 40.0% | |
AGATCTATGGGATGTTCAAG+AGG | - | chr8_2:59828376-59828395 | Msa1258600:three_prime_UTR | 40.0% | |
! | AAACTACCTTGGTTTGAAGC+AGG | + | chr8_2:59828470-59828489 | None:intergenic | 40.0% |
TCTGACAAACCAATCAACTG+TGG | - | chr8_2:59828660-59828679 | Msa1258600:CDS | 40.0% | |
TGTTTGGTACCACAGTTGAT+TGG | + | chr8_2:59828672-59828691 | None:intergenic | 40.0% | |
GTCACATACACATGCATGTT+TGG | + | chr8_2:59828688-59828707 | None:intergenic | 40.0% | |
! | TATTTTCACAGCTTCAGCCA+AGG | + | chr8_2:59828814-59828833 | None:intergenic | 40.0% |
GGCTGAAGCTGTGAAAATAT+TGG | - | chr8_2:59828815-59828834 | Msa1258600:intron | 40.0% | |
TCAATCCAACTAGCATCTTC+AGG | + | chr8_2:59828885-59828904 | None:intergenic | 40.0% | |
ATCGGAATAGTTGAGTTTGC+TGG | - | chr8_2:59828912-59828931 | Msa1258600:intron | 40.0% | |
ATATTTCAGGGACATTCCGA+TGG | - | chr8_2:59829564-59829583 | Msa1258600:CDS | 40.0% | |
TATTTCAGGGACATTCCGAT+GGG | - | chr8_2:59829565-59829584 | Msa1258600:CDS | 40.0% | |
GATCTCTCCAAAGCAAGAAA+CGG | + | chr8_2:59829593-59829612 | None:intergenic | 40.0% | |
!! | CAAAATGAAGAGTGTTCCTG+TGG | - | chr8_2:59829652-59829671 | Msa1258600:CDS | 40.0% |
ACTTTCGAACCATTGAAGTC+CGG | + | chr8_2:59829750-59829769 | None:intergenic | 40.0% | |
GACTTCAATGGTTCGAAAGT+TGG | - | chr8_2:59829750-59829769 | Msa1258600:intron | 40.0% | |
CTTCAATGGTTCGAAAGTTG+GGG | - | chr8_2:59829752-59829771 | Msa1258600:intron | 40.0% | |
ACCAAGGAACTATCTGATGT+TGG | - | chr8_2:59829776-59829795 | Msa1258600:intron | 40.0% | |
ACCAACATCAGATAGTTCCT+TGG | + | chr8_2:59829780-59829799 | None:intergenic | 40.0% | |
!! | CACACCTTGATGATCTGTTT+TGG | + | chr8_2:59829818-59829837 | None:intergenic | 40.0% |
GACAAGGTTCAATGCAATGA+GGG | + | chr8_2:59829857-59829876 | None:intergenic | 40.0% | |
TGACAAGGTTCAATGCAATG+AGG | + | chr8_2:59829858-59829877 | None:intergenic | 40.0% | |
TTATAGGTATGTCACCACAG+AGG | - | chr8_2:59830204-59830223 | Msa1258600:intron | 40.0% | |
CTCAGCAAAATCAAGGATTG+TGG | + | chr8_2:59830255-59830274 | None:intergenic | 40.0% | |
GTTGTCAAATATGGCTGATG+CGG | - | chr8_2:59830279-59830298 | Msa1258600:intron | 40.0% | |
CTTCTCCAAGTAGCTTCTAA+CGG | + | chr8_2:59830503-59830522 | None:intergenic | 40.0% | |
TCTATGTTGTGGACGATGAT+GGG | - | chr8_2:59830626-59830645 | Msa1258600:intron | 40.0% | |
AAATCACCAAAATAGCCGTG+GGG | + | chr8_2:59830706-59830725 | None:intergenic | 40.0% | |
GAAATCACCAAAATAGCCGT+GGG | + | chr8_2:59830707-59830726 | None:intergenic | 40.0% | |
AGAAATCACCAAAATAGCCG+TGG | + | chr8_2:59830708-59830727 | None:intergenic | 40.0% | |
TGTTAAACCCTGCTATTAGC+AGG | + | chr8_2:59830751-59830770 | None:intergenic | 40.0% | |
ATAGCAGGGTTTAACAGACA+TGG | - | chr8_2:59830755-59830774 | Msa1258600:intron | 40.0% | |
! | CAGGTTGAAGATGTGTATCT+AGG | - | chr8_2:59830872-59830891 | Msa1258600:CDS | 40.0% |
CTACAATGAGAGAGATGCCA+AGG | - | chr8_2:59828321-59828340 | Msa1258600:three_prime_UTR | 45.0% | |
GGCAAAGGAAAAGCAGAAAC+AGG | + | chr8_2:59828449-59828468 | None:intergenic | 45.0% | |
TATTCTGAGTGCACCTGTTG+TGG | - | chr8_2:59828848-59828867 | Msa1258600:intron | 45.0% | |
ATGCACCTGAAGATGCTAGT+TGG | - | chr8_2:59828877-59828896 | Msa1258600:intron | 45.0% | |
CTTAGAAAGCAGCAAGAGCA+TGG | + | chr8_2:59829630-59829649 | None:intergenic | 45.0% | |
AGTGTTCCTGTGGTAGACTT+GGG | - | chr8_2:59829662-59829681 | Msa1258600:CDS | 45.0% | |
TGCCAACATATGAATCACGG+CGG | + | chr8_2:59829720-59829739 | None:intergenic | 45.0% | |
CATATGTTGGCAGAATGTGC+CGG | - | chr8_2:59829728-59829747 | Msa1258600:intron | 45.0% | |
!!! | ATCTGTTTTGGCGTCACAAG+GGG | + | chr8_2:59829806-59829825 | None:intergenic | 45.0% |
!!! | GATCTGTTTTGGCGTCACAA+GGG | + | chr8_2:59829807-59829826 | None:intergenic | 45.0% |
!!! | TGATCTGTTTTGGCGTCACA+AGG | + | chr8_2:59829808-59829827 | None:intergenic | 45.0% |
GACGCCAAAACAGATCATCA+AGG | - | chr8_2:59829811-59829830 | Msa1258600:CDS | 45.0% | |
GAGATGAGGAAAAAGAGGGT+TGG | - | chr8_2:59830082-59830101 | Msa1258600:intron | 45.0% | |
ATGAGGAAAAAGAGGGTTGG+AGG | - | chr8_2:59830085-59830104 | Msa1258600:intron | 45.0% | |
TGAGGAAAAAGAGGGTTGGA+GGG | - | chr8_2:59830086-59830105 | Msa1258600:intron | 45.0% | |
GTGCCTGTAATCAAAAGAGG+TGG | - | chr8_2:59830109-59830128 | Msa1258600:intron | 45.0% | |
!! | GTGCCACCTCTTTTGATTAC+AGG | + | chr8_2:59830115-59830134 | None:intergenic | 45.0% |
AATCAAAAGAGGTGGCACCA+CGG | - | chr8_2:59830117-59830136 | Msa1258600:intron | 45.0% | |
GCTTATATTACCAACTGCCG+TGG | + | chr8_2:59830137-59830156 | None:intergenic | 45.0% | |
GATGTCTTTGACCGTGATTG+AGG | + | chr8_2:59830305-59830324 | None:intergenic | 45.0% | |
AAGGTCTGCATCCACAATTC+AGG | + | chr8_2:59830346-59830365 | None:intergenic | 45.0% | |
GTCTATGTTGTGGACGATGA+TGG | - | chr8_2:59830625-59830644 | Msa1258600:intron | 45.0% | |
! | AGTTTGGCTTCTGGACTCCT+TGG | + | chr8_2:59828341-59828360 | None:intergenic | 50.0% |
AGGAGTCCAGAAGCCAAACT+TGG | - | chr8_2:59828341-59828360 | Msa1258600:three_prime_UTR | 50.0% | |
GGAGTCCAGAAGCCAAACTT+GGG | - | chr8_2:59828342-59828361 | Msa1258600:three_prime_UTR | 50.0% | |
! | CTCATCCCAAGTTTGGCTTC+TGG | + | chr8_2:59828350-59828369 | None:intergenic | 50.0% |
! | CCTTGGTTTGAAGCAGGCAA+AGG | + | chr8_2:59828464-59828483 | None:intergenic | 50.0% |
CCTTTGCCTGCTTCAAACCA+AGG | - | chr8_2:59828461-59828480 | Msa1258600:three_prime_UTR | 50.0% | |
GGTGCATCAACATCCACAAC+AGG | + | chr8_2:59828864-59828883 | None:intergenic | 50.0% | |
! | TTGGAGTGGATGGACTCCTA+GGG | + | chr8_2:59829295-59829314 | None:intergenic | 50.0% |
! | GCAATAGCACTTGCACTGGT+TGG | + | chr8_2:59829314-59829333 | None:intergenic | 50.0% |
AAGCAAGAAACGGAGCCCAT+CGG | + | chr8_2:59829583-59829602 | None:intergenic | 50.0% | |
ATGGGCTCCGTTTCTTGCTT+TGG | - | chr8_2:59829583-59829602 | Msa1258600:CDS | 50.0% | |
GAGTGTTCCTGTGGTAGACT+TGG | - | chr8_2:59829661-59829680 | Msa1258600:CDS | 50.0% | |
ACCCGCCGTGATTCATATGT+TGG | - | chr8_2:59829715-59829734 | Msa1258600:intron | 50.0% | |
GCCAACATATGAATCACGGC+GGG | + | chr8_2:59829719-59829738 | None:intergenic | 50.0% | |
CAGAATGTGCCGGACTTCAA+TGG | - | chr8_2:59829738-59829757 | Msa1258600:intron | 50.0% | |
GTTCGAAAGTTGGGGAACCA+AGG | - | chr8_2:59829760-59829779 | Msa1258600:intron | 50.0% | |
GAGGAAAAAGAGGGTTGGAG+GGG | - | chr8_2:59830087-59830106 | Msa1258600:intron | 50.0% | |
! | GGGGTGCCTGTAATCAAAAG+AGG | - | chr8_2:59830106-59830125 | Msa1258600:intron | 50.0% |
ACAATTCAGGTCGTGACGCA+AGG | + | chr8_2:59830333-59830352 | None:intergenic | 50.0% | |
TTGCGTCACGACCTGAATTG+TGG | - | chr8_2:59830332-59830351 | Msa1258600:CDS | 50.0% | |
AGTAGCTTCTAACGGAGGTC+AGG | + | chr8_2:59830495-59830514 | None:intergenic | 50.0% | |
GACCTCCGTTAGAAGCTACT+TGG | - | chr8_2:59830495-59830514 | Msa1258600:intron | 50.0% | |
CTCCAAGTAGCTTCTAACGG+AGG | + | chr8_2:59830500-59830519 | None:intergenic | 50.0% | |
!! | GACGATGATGGGAACCTTGA+AGG | - | chr8_2:59830637-59830656 | Msa1258600:intron | 50.0% |
AGGCTAGTACATGAACCCCA+CGG | - | chr8_2:59830688-59830707 | Msa1258600:intron | 50.0% | |
! | CATGAACCCCACGGCTATTT+TGG | - | chr8_2:59830697-59830716 | Msa1258600:intron | 50.0% |
TCCCTCTACCTGCTAATAGC+AGG | - | chr8_2:59830740-59830759 | Msa1258600:intron | 50.0% | |
CCCTGCTATTAGCAGGTAGA+GGG | + | chr8_2:59830744-59830763 | None:intergenic | 50.0% | |
CCCTCTACCTGCTAATAGCA+GGG | - | chr8_2:59830741-59830760 | Msa1258600:intron | 50.0% | |
ACCCTGCTATTAGCAGGTAG+AGG | + | chr8_2:59830745-59830764 | None:intergenic | 50.0% | |
AGTCTGAACCTCCATCCCCT+AGG | - | chr8_2:59829276-59829295 | Msa1258600:intron | 55.0% | |
! | TGGAGTGGATGGACTCCTAG+GGG | + | chr8_2:59829294-59829313 | None:intergenic | 55.0% |
! | GTTGGAGTGGATGGACTCCT+AGG | + | chr8_2:59829296-59829315 | None:intergenic | 55.0% |
!! | CTTGCACTGGTTGGAGTGGA+TGG | + | chr8_2:59829305-59829324 | None:intergenic | 55.0% |
!! | AGCACTTGCACTGGTTGGAG+TGG | + | chr8_2:59829309-59829328 | None:intergenic | 55.0% |
GGCTGCAATAGCACTTGCAC+TGG | + | chr8_2:59829318-59829337 | None:intergenic | 55.0% | |
GCTATTGCAGCCGCAGCAAA+CGG | - | chr8_2:59829326-59829345 | Msa1258600:intron | 55.0% | |
GCTCGAGAACTCGAAGCCTT+AGG | - | chr8_2:59829359-59829378 | Msa1258600:intron | 55.0% | |
GAACTCGAAGCCTTAGGCCT+CGG | - | chr8_2:59829365-59829384 | Msa1258600:intron | 55.0% | |
AAGTTGTCGCTGCAGATCCG+AGG | + | chr8_2:59829385-59829404 | None:intergenic | 55.0% | |
GGATCTGCAGCGACAACTTC+TGG | - | chr8_2:59829386-59829405 | Msa1258600:intron | 55.0% | |
! | GATGGACTCCTAGGGGATGG+AGG | + | chr8_2:59829287-59829306 | None:intergenic | 60.0% |
! | GTGGATGGACTCCTAGGGGA+TGG | + | chr8_2:59829290-59829309 | None:intergenic | 60.0% |
CCAGCACCCAAGTCTACCAC+AGG | + | chr8_2:59829671-59829690 | None:intergenic | 60.0% | |
CCTGTGGTAGACTTGGGTGC+TGG | - | chr8_2:59829668-59829687 | Msa1258600:CDS | 60.0% | |
GGCTGATGCGGCCTCAATCA+CGG | - | chr8_2:59830291-59830310 | Msa1258600:intron | 60.0% | |
CGCTGCAGATCCGAGGCCTA+AGG | + | chr8_2:59829378-59829397 | None:intergenic | 65.0% | |
AGAGGTGGCACCACGGCAGT+TGG | - | chr8_2:59830124-59830143 | Msa1258600:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 59828174 | 59831077 | 59828174 | ID=Msa1258600;Name=Msa1258600 |
chr8_2 | mRNA | 59828174 | 59831077 | 59828174 | ID=Msa1258600-mRNA-1;Parent=Msa1258600;Name=Msa1258600-mRNA-1;_AED=0.05;_eAED=0.05;_QI=101|1|1|1|1|1|6|309|432 |
chr8_2 | exon | 59828174 | 59828780 | 59828174 | ID=Msa1258600-mRNA-1:exon:18701;Parent=Msa1258600-mRNA-1 |
chr8_2 | exon | 59829042 | 59829205 | 59829042 | ID=Msa1258600-mRNA-1:exon:18700;Parent=Msa1258600-mRNA-1 |
chr8_2 | exon | 59829419 | 59829694 | 59829419 | ID=Msa1258600-mRNA-1:exon:18699;Parent=Msa1258600-mRNA-1 |
chr8_2 | exon | 59829794 | 59829973 | 59829794 | ID=Msa1258600-mRNA-1:exon:18698;Parent=Msa1258600-mRNA-1 |
chr8_2 | exon | 59830292 | 59830464 | 59830292 | ID=Msa1258600-mRNA-1:exon:18697;Parent=Msa1258600-mRNA-1 |
chr8_2 | exon | 59830769 | 59831077 | 59830769 | ID=Msa1258600-mRNA-1:exon:18696;Parent=Msa1258600-mRNA-1 |
chr8_2 | five_prime_UTR | 59830977 | 59831077 | 59830977 | ID=Msa1258600-mRNA-1:five_prime_utr;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59830769 | 59830976 | 59830769 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59830292 | 59830464 | 59830292 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59829794 | 59829973 | 59829794 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59829419 | 59829694 | 59829419 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59829042 | 59829205 | 59829042 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | CDS | 59828483 | 59828780 | 59828483 | ID=Msa1258600-mRNA-1:cds;Parent=Msa1258600-mRNA-1 |
chr8_2 | three_prime_UTR | 59828174 | 59828482 | 59828174 | ID=Msa1258600-mRNA-1:three_prime_utr;Parent=Msa1258600-mRNA-1 |
Gene Sequence |
Protein sequence |