Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1400940 | XP_003608836.1 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1400940 | sp|Q8LBB2|KING1_ARATH | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0.0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1400940 | G7JLE4 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000180 | Msa1400940 | -0.807354 | 5.266626e-50 | -8.615850e-47 |
Msa0003370 | Msa1400940 | -0.835320 | 1.796858e-56 | -8.615850e-47 |
Msa0025060 | Msa1400940 | -0.874718 | 5.423522e-68 | -8.615850e-47 |
Msa0025090 | Msa1400940 | -0.850794 | 1.348364e-60 | -8.615850e-47 |
Msa0026120 | Msa1400940 | -0.804158 | 2.470386e-49 | -8.615850e-47 |
Msa0028450 | Msa1400940 | -0.809322 | 2.003770e-50 | -8.615850e-47 |
Msa0030320 | Msa1400940 | -0.814233 | 1.710349e-51 | -8.615850e-47 |
Msa0030710 | Msa1400940 | -0.806198 | 9.243913e-50 | -8.615850e-47 |
Msa0032040 | Msa1400940 | -0.822229 | 2.648935e-53 | -8.615850e-47 |
Msa0034590 | Msa1400940 | -0.803364 | 3.610997e-49 | -8.615850e-47 |
Msa0034800 | Msa1400940 | -0.836258 | 1.039897e-56 | -8.615850e-47 |
Msa0036560 | Msa1400940 | -0.855970 | 4.412562e-62 | -8.615850e-47 |
Msa0047990 | Msa1400940 | 0.829302 | 5.554227e-55 | -8.615850e-47 |
Msa0050850 | Msa1400940 | -0.813752 | 2.182825e-51 | -8.615850e-47 |
Msa0072590 | Msa1400940 | -0.849375 | 3.366479e-60 | -8.615850e-47 |
Msa0072910 | Msa1400940 | -0.825089 | 5.668901e-54 | -8.615850e-47 |
Msa0077920 | Msa1400940 | -0.813340 | 2.690146e-51 | -8.615850e-47 |
Msa0079320 | Msa1400940 | -0.803603 | 3.222219e-49 | -8.615850e-47 |
Msa0082340 | Msa1400940 | -0.800065 | 1.716456e-48 | -8.615850e-47 |
Msa0083200 | Msa1400940 | -0.814234 | 1.709254e-51 | -8.615850e-47 |
Msa0089410 | Msa1400940 | -0.839232 | 1.792443e-57 | -8.615850e-47 |
Msa0092390 | Msa1400940 | -0.810846 | 9.408433e-51 | -8.615850e-47 |
Msa0099090 | Msa1400940 | -0.801950 | 7.068083e-49 | -8.615850e-47 |
Msa0106810 | Msa1400940 | -0.804313 | 2.293525e-49 | -8.615850e-47 |
Msa0112800 | Msa1400940 | -0.816377 | 5.706285e-52 | -8.615850e-47 |
Msa0114960 | Msa1400940 | -0.822193 | 2.700600e-53 | -8.615850e-47 |
Msa1344460 | Msa1400940 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
Msa1357760 | Msa1400940 | -0.844813 | 5.993391e-59 | -8.615850e-47 |
Msa1368800 | Msa1400940 | -0.809188 | 2.140930e-50 | -8.615850e-47 |
Msa1370830 | Msa1400940 | -0.832468 | 9.290898e-56 | -8.615850e-47 |
Msa1375640 | Msa1400940 | 0.841429 | 4.776784e-58 | -8.615850e-47 |
Msa1376520 | Msa1400940 | 0.857120 | 2.026922e-62 | -8.615850e-47 |
Msa1377170 | Msa1400940 | -0.816988 | 4.163591e-52 | -8.615850e-47 |
Msa1382640 | Msa1400940 | 0.810500 | 1.117889e-50 | -8.615850e-47 |
Msa1386150 | Msa1400940 | 0.823584 | 1.280301e-53 | -8.615850e-47 |
Msa1392990 | Msa1400940 | -0.809324 | 2.001413e-50 | -8.615850e-47 |
Msa1395700 | Msa1400940 | -0.868296 | 7.255139e-66 | -8.615850e-47 |
Msa1397550 | Msa1400940 | -0.854510 | 1.173064e-61 | -8.615850e-47 |
Msa1398110 | Msa1400940 | 0.825363 | 4.881795e-54 | -8.615850e-47 |
Msa1400600 | Msa1400940 | -0.813643 | 2.306647e-51 | -8.615850e-47 |
Msa1400940 | Msa1402000 | 0.838873 | 2.220544e-57 | -8.615850e-47 |
Msa1400940 | Msa1420630 | -0.840099 | 1.065961e-57 | -8.615850e-47 |
Msa1400940 | Msa1425570 | -0.840121 | 1.052337e-57 | -8.615850e-47 |
Msa1400940 | Msa1425600 | -0.801313 | 9.550130e-49 | -8.615850e-47 |
Msa1400940 | Msa1426690 | -0.811225 | 7.787158e-51 | -8.615850e-47 |
Msa1400940 | Msa1429190 | 0.850058 | 2.170327e-60 | -8.615850e-47 |
Msa1400940 | Msa1431050 | 0.832458 | 9.344468e-56 | -8.615850e-47 |
Msa1400940 | Msa1433060 | -0.803770 | 2.974343e-49 | -8.615850e-47 |
Msa1400940 | Msa1433650 | -0.806305 | 8.774780e-50 | -8.615850e-47 |
Msa1400940 | Msa1439160 | -0.811324 | 7.410911e-51 | -8.615850e-47 |
Msa1400940 | Msa1449510 | -0.828006 | 1.142801e-54 | -8.615850e-47 |
Msa1400940 | Msa1459930 | 0.806753 | 7.059052e-50 | -8.615850e-47 |
Msa0611450 | Msa1400940 | -0.806709 | 7.209911e-50 | -8.615850e-47 |
Msa0619460 | Msa1400940 | -0.836926 | 7.029088e-57 | -8.615850e-47 |
Msa0619520 | Msa1400940 | -0.831378 | 1.727369e-55 | -8.615850e-47 |
Msa0624890 | Msa1400940 | -0.846843 | 1.683142e-59 | -8.615850e-47 |
Msa0626890 | Msa1400940 | -0.811362 | 7.270910e-51 | -8.615850e-47 |
Msa0641970 | Msa1400940 | -0.836187 | 1.083594e-56 | -8.615850e-47 |
Msa0646180 | Msa1400940 | -0.803037 | 4.221006e-49 | -8.615850e-47 |
Msa0648410 | Msa1400940 | -0.810308 | 1.229846e-50 | -8.615850e-47 |
Msa0651720 | Msa1400940 | -0.807578 | 4.720051e-50 | -8.615850e-47 |
Msa0657820 | Msa1400940 | -0.800758 | 1.240313e-48 | -8.615850e-47 |
Msa0659590 | Msa1400940 | -0.827294 | 1.693446e-54 | -8.615850e-47 |
Msa0665010 | Msa1400940 | -0.850829 | 1.318597e-60 | -8.615850e-47 |
Msa0667710 | Msa1400940 | -0.835946 | 1.248102e-56 | -8.615850e-47 |
Msa0681040 | Msa1400940 | -0.825031 | 5.849674e-54 | -8.615850e-47 |
Msa0690920 | Msa1400940 | -0.819579 | 1.078614e-52 | -8.615850e-47 |
Msa0692710 | Msa1400940 | -0.800311 | 1.529936e-48 | -8.615850e-47 |
Msa0704750 | Msa1400940 | -0.803777 | 2.965401e-49 | -8.615850e-47 |
Msa0708840 | Msa1400940 | -0.805626 | 1.218715e-49 | -8.615850e-47 |
Msa0709820 | Msa1400940 | 0.835220 | 1.905021e-56 | -8.615850e-47 |
Msa0715050 | Msa1400940 | -0.815282 | 1.001274e-51 | -8.615850e-47 |
Msa0721260 | Msa1400940 | 0.822452 | 2.351615e-53 | -8.615850e-47 |
Msa0742690 | Msa1400940 | -0.831560 | 1.557488e-55 | -8.615850e-47 |
Msa0743630 | Msa1400940 | -0.833795 | 4.344504e-56 | -8.615850e-47 |
Msa0747500 | Msa1400940 | 0.827491 | 1.519653e-54 | -8.615850e-47 |
Msa0748940 | Msa1400940 | 0.826538 | 2.568580e-54 | -8.615850e-47 |
Msa0753410 | Msa1400940 | 0.855843 | 4.807123e-62 | -8.615850e-47 |
Msa0762390 | Msa1400940 | -0.807817 | 4.200201e-50 | -8.615850e-47 |
Msa0762470 | Msa1400940 | -0.803944 | 2.737555e-49 | -8.615850e-47 |
Msa0777210 | Msa1400940 | 0.803768 | 2.977827e-49 | -8.615850e-47 |
Msa0779830 | Msa1400940 | -0.828485 | 8.760009e-55 | -8.615850e-47 |
Msa0783680 | Msa1400940 | 0.810851 | 9.384842e-51 | -8.615850e-47 |
Msa0795330 | Msa1400940 | 0.857816 | 1.261128e-62 | -8.615850e-47 |
Msa0807170 | Msa1400940 | -0.801517 | 8.673914e-49 | -8.615850e-47 |
Msa0814350 | Msa1400940 | 0.819385 | 1.194399e-52 | -8.615850e-47 |
Msa0824750 | Msa1400940 | -0.818696 | 1.712864e-52 | -8.615850e-47 |
Msa0826360 | Msa1400940 | 0.803471 | 3.432017e-49 | -8.615850e-47 |
Msa0827560 | Msa1400940 | -0.835621 | 1.508609e-56 | -8.615850e-47 |
Msa0841550 | Msa1400940 | 0.819701 | 1.011402e-52 | -8.615850e-47 |
Msa0121080 | Msa1400940 | -0.824542 | 7.627932e-54 | -8.615850e-47 |
Msa0125810 | Msa1400940 | -0.815682 | 8.156482e-52 | -8.615850e-47 |
Msa0131800 | Msa1400940 | 0.816552 | 5.215561e-52 | -8.615850e-47 |
Msa0136010 | Msa1400940 | 0.820607 | 6.273799e-53 | -8.615850e-47 |
Msa0136520 | Msa1400940 | -0.854189 | 1.452567e-61 | -8.615850e-47 |
Msa0139280 | Msa1400940 | -0.863186 | 2.978382e-64 | -8.615850e-47 |
Msa0143360 | Msa1400940 | -0.806855 | 6.717330e-50 | -8.615850e-47 |
Msa0146570 | Msa1400940 | -0.839787 | 1.285694e-57 | -8.615850e-47 |
Msa0153290 | Msa1400940 | -0.813721 | 2.217415e-51 | -8.615850e-47 |
Msa0166580 | Msa1400940 | -0.820441 | 6.847678e-53 | -8.615850e-47 |
Msa0167800 | Msa1400940 | -0.800208 | 1.605104e-48 | -8.615850e-47 |
Msa0170640 | Msa1400940 | -0.807266 | 5.498462e-50 | -8.615850e-47 |
Msa0172110 | Msa1400940 | -0.833662 | 4.688063e-56 | -8.615850e-47 |
Msa0173260 | Msa1400940 | 0.855105 | 7.888306e-62 | -8.615850e-47 |
Msa0174800 | Msa1400940 | -0.831414 | 1.691988e-55 | -8.615850e-47 |
Msa0176610 | Msa1400940 | -0.878251 | 3.267025e-69 | -8.615850e-47 |
Msa0183960 | Msa1400940 | -0.815909 | 7.260318e-52 | -8.615850e-47 |
Msa0186380 | Msa1400940 | -0.818720 | 1.691662e-52 | -8.615850e-47 |
Msa0187820 | Msa1400940 | -0.801154 | 1.029166e-48 | -8.615850e-47 |
Msa0192890 | Msa1400940 | 0.875884 | 2.166154e-68 | -8.615850e-47 |
Msa0194370 | Msa1400940 | -0.802522 | 5.391602e-49 | -8.615850e-47 |
Msa0194870 | Msa1400940 | -0.800583 | 1.346237e-48 | -8.615850e-47 |
Msa0194900 | Msa1400940 | -0.805025 | 1.629178e-49 | -8.615850e-47 |
Msa0198140 | Msa1400940 | -0.801944 | 7.088830e-49 | -8.615850e-47 |
Msa0201910 | Msa1400940 | -0.826725 | 2.316963e-54 | -8.615850e-47 |
Msa0206600 | Msa1400940 | -0.830135 | 3.482139e-55 | -8.615850e-47 |
Msa0207220 | Msa1400940 | -0.827606 | 1.425593e-54 | -8.615850e-47 |
Msa0207530 | Msa1400940 | -0.817122 | 3.884521e-52 | -8.615850e-47 |
Msa0207900 | Msa1400940 | -0.823697 | 1.204421e-53 | -8.615850e-47 |
Msa0219140 | Msa1400940 | -0.855059 | 8.133666e-62 | -8.615850e-47 |
Msa0226580 | Msa1400940 | -0.821877 | 3.195829e-53 | -8.615850e-47 |
Msa0232170 | Msa1400940 | -0.807580 | 4.715404e-50 | -8.615850e-47 |
Msa0235020 | Msa1400940 | 0.854251 | 1.394337e-61 | -8.615850e-47 |
Msa1227090 | Msa1400940 | -0.817153 | 3.822595e-52 | -8.615850e-47 |
Msa1229880 | Msa1400940 | -0.805692 | 1.180626e-49 | -8.615850e-47 |
Msa1235960 | Msa1400940 | -0.837428 | 5.228126e-57 | -8.615850e-47 |
Msa1235990 | Msa1400940 | -0.841633 | 4.220241e-58 | -8.615850e-47 |
Msa1251500 | Msa1400940 | 0.815025 | 1.141995e-51 | -8.615850e-47 |
Msa1251890 | Msa1400940 | -0.818971 | 1.483881e-52 | -8.615850e-47 |
Msa1251960 | Msa1400940 | -0.817894 | 2.602466e-52 | -8.615850e-47 |
Msa1252220 | Msa1400940 | -0.832170 | 1.101264e-55 | -8.615850e-47 |
Msa1257170 | Msa1400940 | 0.907940 | 2.941509e-81 | -8.615850e-47 |
Msa1258600 | Msa1400940 | 0.999162 | 1.758916e-293 | -8.615850e-47 |
Msa1267800 | Msa1400940 | -0.827843 | 1.250553e-54 | -8.615850e-47 |
Msa1279240 | Msa1400940 | -0.819347 | 1.218397e-52 | -8.615850e-47 |
Msa1295840 | Msa1400940 | -0.814350 | 1.611409e-51 | -8.615850e-47 |
Msa1298440 | Msa1400940 | 0.978177 | 2.772405e-145 | -8.615850e-47 |
Msa1302120 | Msa1400940 | 0.890306 | 1.109637e-73 | -8.615850e-47 |
Msa1304980 | Msa1400940 | 0.832527 | 8.982249e-56 | -8.615850e-47 |
Msa1314810 | Msa1400940 | 0.832447 | 9.406136e-56 | -8.615850e-47 |
Msa1316090 | Msa1400940 | -0.837211 | 5.941408e-57 | -8.615850e-47 |
Msa1327400 | Msa1400940 | -0.812830 | 3.480593e-51 | -8.615850e-47 |
Msa1327420 | Msa1400940 | -0.809897 | 1.507398e-50 | -8.615850e-47 |
Msa1332180 | Msa1400940 | -0.805951 | 1.041751e-49 | -8.615850e-47 |
Msa1336130 | Msa1400940 | 0.832366 | 9.847614e-56 | -8.615850e-47 |
Msa0369660 | Msa1400940 | 0.869802 | 2.355622e-66 | -8.615850e-47 |
Msa0378570 | Msa1400940 | -0.811101 | 8.285517e-51 | -8.615850e-47 |
Msa0384130 | Msa1400940 | -0.812937 | 3.297650e-51 | -8.615850e-47 |
Msa0384220 | Msa1400940 | 0.864317 | 1.326203e-64 | -8.615850e-47 |
Msa0385870 | Msa1400940 | -0.822370 | 2.456572e-53 | -8.615850e-47 |
Msa0387180 | Msa1400940 | 0.882005 | 1.496325e-70 | -8.615850e-47 |
Msa0412820 | Msa1400940 | 0.810007 | 1.427952e-50 | -8.615850e-47 |
Msa0417060 | Msa1400940 | 0.838502 | 2.767825e-57 | -8.615850e-47 |
Msa0421690 | Msa1400940 | 0.857502 | 1.562207e-62 | -8.615850e-47 |
Msa0427850 | Msa1400940 | 0.863542 | 2.311864e-64 | -8.615850e-47 |
Msa0434890 | Msa1400940 | 0.820872 | 5.451575e-53 | -8.615850e-47 |
Msa0451370 | Msa1400940 | -0.801363 | 9.329327e-49 | -8.615850e-47 |
Msa0453310 | Msa1400940 | -0.801605 | 8.322913e-49 | -8.615850e-47 |
Msa0457530 | Msa1400940 | 0.800675 | 1.289338e-48 | -8.615850e-47 |
Msa0463890 | Msa1400940 | 0.879709 | 9.983375e-70 | -8.615850e-47 |
Msa0465420 | Msa1400940 | 0.836171 | 1.094018e-56 | -8.615850e-47 |
Msa0468050 | Msa1400940 | 0.880635 | 4.666564e-70 | -8.615850e-47 |
Msa0474080 | Msa1400940 | 0.854205 | 1.437008e-61 | -8.615850e-47 |
Msa0478750 | Msa1400940 | -0.823826 | 1.123787e-53 | -8.615850e-47 |
Msa0481580 | Msa1400940 | -0.811319 | 7.428203e-51 | -8.615850e-47 |
Msa0482360 | Msa1400940 | 0.925755 | 1.192983e-90 | -8.615850e-47 |
Msa0982340 | Msa1400940 | 0.830072 | 3.608823e-55 | -8.615850e-47 |
Msa0985980 | Msa1400940 | -0.806457 | 8.148708e-50 | -8.615850e-47 |
Msa0996940 | Msa1400940 | 0.800201 | 1.610730e-48 | -8.615850e-47 |
Msa1014530 | Msa1400940 | -0.815753 | 7.866679e-52 | -8.615850e-47 |
Msa1030380 | Msa1400940 | 0.809724 | 1.642558e-50 | -8.615850e-47 |
Msa1031220 | Msa1400940 | -0.805367 | 1.381463e-49 | -8.615850e-47 |
Msa1034870 | Msa1400940 | 0.865686 | 4.930648e-65 | -8.615850e-47 |
Msa1041620 | Msa1400940 | -0.832111 | 1.139057e-55 | -8.615850e-47 |
Msa1042380 | Msa1400940 | -0.805798 | 1.121711e-49 | -8.615850e-47 |
Msa1049810 | Msa1400940 | 0.812191 | 4.799071e-51 | -8.615850e-47 |
Msa1050320 | Msa1400940 | -0.815696 | 8.098392e-52 | -8.615850e-47 |
Msa1069390 | Msa1400940 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
Msa1070020 | Msa1400940 | -0.802411 | 5.681453e-49 | -8.615850e-47 |
Msa1074910 | Msa1400940 | 0.831098 | 2.023563e-55 | -8.615850e-47 |
Msa1081650 | Msa1400940 | -0.847839 | 8.972499e-60 | -8.615850e-47 |
Msa1085860 | Msa1400940 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
Msa1098470 | Msa1400940 | -0.800360 | 1.494887e-48 | -8.615850e-47 |
Msa1101480 | Msa1400940 | -0.801172 | 1.020842e-48 | -8.615850e-47 |
Msa0244370 | Msa1400940 | -0.823474 | 1.358319e-53 | -8.615850e-47 |
Msa0249670 | Msa1400940 | -0.827869 | 1.232392e-54 | -8.615850e-47 |
Msa0258280 | Msa1400940 | -0.806762 | 7.028987e-50 | -8.615850e-47 |
Msa0258960 | Msa1400940 | -0.846714 | 1.826173e-59 | -8.615850e-47 |
Msa0273420 | Msa1400940 | 0.858336 | 8.833558e-63 | -8.615850e-47 |
Msa0275890 | Msa1400940 | 0.813093 | 3.047642e-51 | -8.615850e-47 |
Msa0282880 | Msa1400940 | -0.823236 | 1.544350e-53 | -8.615850e-47 |
Msa0288270 | Msa1400940 | -0.803961 | 2.714647e-49 | -8.615850e-47 |
Msa0288280 | Msa1400940 | -0.831986 | 1.222611e-55 | -8.615850e-47 |
Msa0294650 | Msa1400940 | -0.807574 | 4.729353e-50 | -8.615850e-47 |
Msa0298180 | Msa1400940 | -0.805957 | 1.038577e-49 | -8.615850e-47 |
Msa0313050 | Msa1400940 | 0.805423 | 1.344763e-49 | -8.615850e-47 |
Msa0313680 | Msa1400940 | 0.869329 | 3.360066e-66 | -8.615850e-47 |
Msa0315390 | Msa1400940 | -0.808445 | 3.086420e-50 | -8.615850e-47 |
Msa0321180 | Msa1400940 | -0.811878 | 5.616131e-51 | -8.615850e-47 |
Msa0321200 | Msa1400940 | -0.815550 | 8.730538e-52 | -8.615850e-47 |
Msa0361040 | Msa1400940 | -0.805981 | 1.026754e-49 | -8.615850e-47 |
Msa1115760 | Msa1400940 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
Msa1129130 | Msa1400940 | -0.815411 | 9.374189e-52 | -8.615850e-47 |
Msa1129470 | Msa1400940 | -0.827508 | 1.504718e-54 | -8.615850e-47 |
Msa1151970 | Msa1400940 | -0.809291 | 2.034506e-50 | -8.615850e-47 |
Msa1157200 | Msa1400940 | 0.801934 | 7.123437e-49 | -8.615850e-47 |
Msa1164670 | Msa1400940 | 0.830892 | 2.272961e-55 | -8.615850e-47 |
Msa1166520 | Msa1400940 | -0.820783 | 5.714548e-53 | -8.615850e-47 |
Msa1171720 | Msa1400940 | 0.809305 | 2.020422e-50 | -8.615850e-47 |
Msa1174450 | Msa1400940 | 0.828126 | 1.069260e-54 | -8.615850e-47 |
Msa1177360 | Msa1400940 | -0.804617 | 1.982301e-49 | -8.615850e-47 |
Msa1186010 | Msa1400940 | -0.814061 | 1.865933e-51 | -8.615850e-47 |
Msa1187160 | Msa1400940 | 0.810782 | 9.714402e-51 | -8.615850e-47 |
Msa1192790 | Msa1400940 | -0.809687 | 1.672967e-50 | -8.615850e-47 |
Msa1198280 | Msa1400940 | -0.800395 | 1.470591e-48 | -8.615850e-47 |
Msa1199690 | Msa1400940 | -0.805326 | 1.409177e-49 | -8.615850e-47 |
Msa1203090 | Msa1400940 | -0.832311 | 1.016372e-55 | -8.615850e-47 |
Msa1203210 | Msa1400940 | -0.819185 | 1.326534e-52 | -8.615850e-47 |
Msa1203720 | Msa1400940 | -0.811531 | 6.683642e-51 | -8.615850e-47 |
Msa1207000 | Msa1400940 | 0.890913 | 6.404253e-74 | -8.615850e-47 |
Msa1207090 | Msa1400940 | 0.887043 | 2.017217e-72 | -8.615850e-47 |
Msa1220390 | Msa1400940 | -0.800051 | 1.727733e-48 | -8.615850e-47 |
Msa1223600 | Msa1400940 | -0.829608 | 4.681138e-55 | -8.615850e-47 |
Msa0484240 | Msa1400940 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
Msa0498320 | Msa1400940 | -0.817624 | 2.993522e-52 | -8.615850e-47 |
Msa0504430 | Msa1400940 | 0.820645 | 6.149247e-53 | -8.615850e-47 |
Msa0509420 | Msa1400940 | 0.815020 | 1.145024e-51 | -8.615850e-47 |
Msa0511280 | Msa1400940 | 0.824121 | 9.584648e-54 | -8.615850e-47 |
Msa0511380 | Msa1400940 | 0.807619 | 4.627424e-50 | -8.615850e-47 |
Msa0513500 | Msa1400940 | -0.807568 | 4.742857e-50 | -8.615850e-47 |
Msa0522830 | Msa1400940 | -0.833468 | 5.240961e-56 | -8.615850e-47 |
Msa0523400 | Msa1400940 | -0.814767 | 1.303018e-51 | -8.615850e-47 |
Msa0532910 | Msa1400940 | -0.840394 | 8.928315e-58 | -8.615850e-47 |
Msa0545910 | Msa1400940 | -0.825620 | 4.243515e-54 | -8.615850e-47 |
Msa0550760 | Msa1400940 | -0.803751 | 3.002550e-49 | -8.615850e-47 |
Msa0553940 | Msa1400940 | -0.821286 | 4.377825e-53 | -8.615850e-47 |
Msa0564000 | Msa1400940 | -0.805578 | 1.247796e-49 | -8.615850e-47 |
Msa0569290 | Msa1400940 | -0.800197 | 1.613203e-48 | -8.615850e-47 |
Msa0577140 | Msa1400940 | -0.803065 | 4.164275e-49 | -8.615850e-47 |
Msa0587060 | Msa1400940 | -0.848544 | 5.728668e-60 | -8.615850e-47 |
Msa0592020 | Msa1400940 | 0.811283 | 7.565018e-51 | -8.615850e-47 |
Msa0595240 | Msa1400940 | -0.801911 | 7.202308e-49 | -8.615850e-47 |
Msa0597300 | Msa1400940 | -0.826735 | 2.304697e-54 | -8.615850e-47 |
Msa0598610 | Msa1400940 | -0.810408 | 1.170080e-50 | -8.615850e-47 |
Msa0854860 | Msa1400940 | 0.814647 | 1.384817e-51 | -8.615850e-47 |
Msa0862750 | Msa1400940 | -0.833478 | 5.210714e-56 | -8.615850e-47 |
Msa0863780 | Msa1400940 | -0.829128 | 6.120135e-55 | -8.615850e-47 |
Msa0875130 | Msa1400940 | -0.835083 | 2.062438e-56 | -8.615850e-47 |
Msa0880370 | Msa1400940 | -0.815413 | 9.362680e-52 | -8.615850e-47 |
Msa0882340 | Msa1400940 | -0.824535 | 7.659967e-54 | -8.615850e-47 |
Msa0882360 | Msa1400940 | 0.802163 | 6.392627e-49 | -8.615850e-47 |
Msa0883880 | Msa1400940 | -0.809320 | 2.006015e-50 | -8.615850e-47 |
Msa0894580 | Msa1400940 | -0.814464 | 1.520078e-51 | -8.615850e-47 |
Msa0896990 | Msa1400940 | 0.821366 | 4.195507e-53 | -8.615850e-47 |
Msa0902810 | Msa1400940 | -0.815641 | 8.332251e-52 | -8.615850e-47 |
Msa0911440 | Msa1400940 | -0.817788 | 2.749177e-52 | -8.615850e-47 |
Msa0911490 | Msa1400940 | -0.806937 | 6.452515e-50 | -8.615850e-47 |
Msa0933050 | Msa1400940 | -0.833168 | 6.225639e-56 | -8.615850e-47 |
Msa0946570 | Msa1400940 | -0.815775 | 7.777102e-52 | -8.615850e-47 |
Msa0947420 | Msa1400940 | 0.825074 | 5.715217e-54 | -8.615850e-47 |
Msa0962260 | Msa1400940 | 0.813513 | 2.463794e-51 | -8.615850e-47 |
Msa0970940 | Msa1400940 | -0.820804 | 5.650621e-53 | -8.615850e-47 |
Msa0976950 | Msa1400940 | -0.852607 | 4.132515e-61 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1400940 | MtrunA17_Chr4g0057571 | 98.843 | 432 | 5 | 0 | 1 | 432 | 1 | 432 | 0.0 | 885 |
Msa1400940 | MtrunA17_Chr5g0416121 | 35.556 | 405 | 225 | 4 | 47 | 420 | 40 | 439 | 7.00e-88 | 274 |
Msa1400940 | MtrunA17_Chr3g0144711 | 22.515 | 342 | 217 | 6 | 85 | 405 | 1 | 315 | 1.07e-23 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1400940 | AT3G48530.1 | 72.439 | 410 | 104 | 2 | 24 | 432 | 23 | 424 | 0.0 | 613 |
Msa1400940 | AT1G69800.1 | 37.221 | 403 | 218 | 4 | 45 | 416 | 35 | 433 | 3.19e-84 | 265 |
Msa1400940 | AT1G69800.2 | 37.221 | 403 | 218 | 4 | 45 | 416 | 64 | 462 | 5.56e-84 | 265 |
Msa1400940 | AT1G69800.3 | 35.455 | 330 | 183 | 2 | 45 | 344 | 35 | 364 | 1.62e-64 | 212 |
Find 120 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGAACCCCACGGCTATTT+TGG | 0.161714 | tig0022494:-44805 | Msa1400940:CDS |
CTATAATCATGATAGATTTC+TGG | 0.217599 | tig0022494:+45315 | None:intergenic |
GGATCTGCAGCGACAACTTC+TGG | 0.254340 | tig0022494:-46116 | Msa1400940:CDS |
GGATGAGAGTTGAAGATCTA+TGG | 0.266856 | tig0022494:-47139 | Msa1400940:CDS |
TCAAAGTTTGACAGAACTTA+TGG | 0.274031 | tig0022494:+44515 | None:intergenic |
ATGGGCTCCGTTTCTTGCTT+TGG | 0.280669 | tig0022494:-45919 | Msa1400940:CDS |
TTCAACTCTCATCCCAAGTT+TGG | 0.288163 | tig0022494:+47148 | None:intergenic |
CAGAAATCTATCATGATTAT+AGG | 0.291433 | tig0022494:-45314 | Msa1400940:intron |
TTAGTGTGATTAGTCCTTCA+AGG | 0.332347 | tig0022494:+44851 | None:intergenic |
ACTTCAATGGTTCGAAAGTT+GGG | 0.335155 | tig0022494:-45751 | Msa1400940:CDS |
GAGAAAAGAAGAGGGAATAA+TGG | 0.336001 | tig0022494:-47210 | Msa1400940:CDS |
CAAGCATTAAGTTTGTCATT+AGG | 0.345513 | tig0022494:+47092 | None:intergenic |
TCTTTCCGCTAGTCATAATA+AGG | 0.356461 | tig0022494:+44456 | None:intergenic |
CTCATCCCAAGTTTGGCTTC+TGG | 0.357377 | tig0022494:+47155 | None:intergenic |
CACACCTTGATGATCTGTTT+TGG | 0.359578 | tig0022494:+45687 | None:intergenic |
AAACAGGTTCGAGATATTTC+AGG | 0.361042 | tig0022494:-45951 | Msa1400940:intron |
TTGACAAAGAGCAAATTCAT+AGG | 0.378131 | tig0022494:-44900 | Msa1400940:CDS |
TATAATCATGATAGATTTCT+GGG | 0.381852 | tig0022494:+45316 | None:intergenic |
TCATCTCTTTAAATGCTTGA+AGG | 0.382534 | tig0022494:+45436 | None:intergenic |
ATCGGAATAGTTGAGTTTGC+TGG | 0.385140 | tig0022494:-46590 | Msa1400940:CDS |
TCAATCCAACTAGCATCTTC+AGG | 0.389432 | tig0022494:+46620 | None:intergenic |
ATTCTAACATTAGTTAAAAC+AGG | 0.399857 | tig0022494:+44570 | None:intergenic |
GTGAATTCATTACATGCAAA+AGG | 0.403501 | tig0022494:-44954 | Msa1400940:CDS |
GACTTCAATGGTTCGAAAGT+TGG | 0.404591 | tig0022494:-45752 | Msa1400940:CDS |
TCTTTAAATGCTTGAAGGAC+TGG | 0.413459 | tig0022494:+45441 | None:intergenic |
AGTTTGGCTTCTGGACTCCT+TGG | 0.419299 | tig0022494:+47164 | None:intergenic |
GGCAAAGGAAAAGCAGAAAC+AGG | 0.426999 | tig0022494:+47056 | None:intergenic |
TAATGAATTCACTTGACATT+GGG | 0.434316 | tig0022494:+44965 | None:intergenic |
TCCCTCTACCTGCTAATAGC+AGG | 0.435441 | tig0022494:-44762 | Msa1400940:CDS |
AGTTTGCTGGAATTGTTGTA+TGG | 0.438748 | tig0022494:-46577 | Msa1400940:CDS |
GGCTGAAGCTGTGAAAATAT+TGG | 0.439718 | tig0022494:-46687 | Msa1400940:CDS |
GTTGGAGTGGATGGACTCCT+AGG | 0.442102 | tig0022494:+46209 | None:intergenic |
AGGAGTCCAGAAGCCAAACT+TGG | 0.448058 | tig0022494:-47161 | Msa1400940:CDS |
TTATTATGGGACAATGTGTT+GGG | 0.452049 | tig0022494:-47315 | Msa1400940:five_prime_UTR |
ATTATTATGGGACAATGTGT+TGG | 0.452353 | tig0022494:-47316 | Msa1400940:five_prime_UTR |
TTGGAGTGGATGGACTCCTA+GGG | 0.452562 | tig0022494:+46210 | None:intergenic |
GCTCGAGAACTCGAAGCCTT+AGG | 0.456172 | tig0022494:-46143 | Msa1400940:CDS |
CTTGCACTGGTTGGAGTGGA+TGG | 0.469031 | tig0022494:+46200 | None:intergenic |
CAGAATGTGCCGGACTTCAA+TGG | 0.469578 | tig0022494:-45764 | Msa1400940:CDS |
AATAAAATCAGATGCTACCT+TGG | 0.469606 | tig0022494:-46708 | Msa1400940:CDS |
GACCTCCGTTAGAAGCTACT+TGG | 0.479934 | tig0022494:-45007 | Msa1400940:CDS |
AGTAGCTTCTAACGGAGGTC+AGG | 0.486459 | tig0022494:+45010 | None:intergenic |
GAGTGTTCCTGTGGTAGACT+TGG | 0.493238 | tig0022494:-45841 | Msa1400940:CDS |
GCTATTGCAGCCGCAGCAAA+CGG | 0.494235 | tig0022494:-46176 | Msa1400940:CDS |
GAACTCGAAGCCTTAGGCCT+CGG | 0.497616 | tig0022494:-46137 | Msa1400940:CDS |
GACGATGATGGGAACCTTGA+AGG | 0.502311 | tig0022494:-44865 | Msa1400940:CDS |
CGCTGCAGATCCGAGGCCTA+AGG | 0.503192 | tig0022494:+46127 | None:intergenic |
GTCTATGTTGTGGACGATGA+TGG | 0.505650 | tig0022494:-44877 | Msa1400940:CDS |
CCCTCTACCTGCTAATAGCA+GGG | 0.507334 | tig0022494:-44761 | Msa1400940:CDS |
GCAATAGCACTTGCACTGGT+TGG | 0.511188 | tig0022494:+46191 | None:intergenic |
TGTTAAACCCTGCTATTAGC+AGG | 0.522009 | tig0022494:+44754 | None:intergenic |
GGTGCATCAACATCCACAAC+AGG | 0.523558 | tig0022494:+46641 | None:intergenic |
ACCAACATCAGATAGTTCCT+TGG | 0.525523 | tig0022494:+45725 | None:intergenic |
ACCCGCCGTGATTCATATGT+TGG | 0.528785 | tig0022494:-45787 | Msa1400940:CDS |
AACAGGTTCGAGATATTTCA+GGG | 0.530914 | tig0022494:-45950 | Msa1400940:intron |
ATGCACCTGAAGATGCTAGT+TGG | 0.531504 | tig0022494:-46625 | Msa1400940:CDS |
TGAATTCATTACATGCAAAA+GGG | 0.536868 | tig0022494:-44953 | Msa1400940:CDS |
CCTGTGGTAGACTTGGGTGC+TGG | 0.537100 | tig0022494:-45834 | Msa1400940:CDS |
ACCCTGCTATTAGCAGGTAG+AGG | 0.541141 | tig0022494:+44760 | None:intergenic |
AAACTACCTTGGTTTGAAGC+AGG | 0.544975 | tig0022494:+47035 | None:intergenic |
CAGGTTGAAGATGTGTATCT+AGG | 0.549376 | tig0022494:-44630 | Msa1400940:three_prime_UTR |
ACTTTCGAACCATTGAAGTC+CGG | 0.551209 | tig0022494:+45755 | None:intergenic |
TTCAAGCATTTAAAGAGATG+AGG | 0.552251 | tig0022494:-45434 | Msa1400940:CDS |
GTAATGAATTCACTTGACAT+TGG | 0.553550 | tig0022494:+44964 | None:intergenic |
GATGAGAGTTGAAGATCTAT+GGG | 0.553732 | tig0022494:-47138 | Msa1400940:CDS |
GATCTCTCCAAAGCAAGAAA+CGG | 0.557531 | tig0022494:+45912 | None:intergenic |
CTTCTCCAAGTAGCTTCTAA+CGG | 0.558499 | tig0022494:+45002 | None:intergenic |
TGACAGAACTATTACAGTGA+AGG | 0.559685 | tig0022494:-45037 | Msa1400940:intron |
CCTTGGTTTGAAGCAGGCAA+AGG | 0.559732 | tig0022494:+47041 | None:intergenic |
AGAGGTGGCACCACGGCAGT+TGG | 0.561682 | tig0022494:-45378 | Msa1400940:CDS |
CCCTGCTATTAGCAGGTAGA+GGG | 0.561914 | tig0022494:+44761 | None:intergenic |
GTGGATGGACTCCTAGGGGA+TGG | 0.565217 | tig0022494:+46215 | None:intergenic |
ACCAAGGAACTATCTGATGT+TGG | 0.572252 | tig0022494:-45726 | Msa1400940:CDS |
CATATGTTGGCAGAATGTGC+CGG | 0.573538 | tig0022494:-45774 | Msa1400940:CDS |
GGCTGCAATAGCACTTGCAC+TGG | 0.573713 | tig0022494:+46187 | None:intergenic |
TATTCTGAGTGCACCTGTTG+TGG | 0.573842 | tig0022494:-46654 | Msa1400940:CDS |
CTTAGAAAGCAGCAAGAGCA+TGG | 0.576526 | tig0022494:+45875 | None:intergenic |
CACAGAGAGAGAAAAGAAGA+GGG | 0.578839 | tig0022494:-47218 | Msa1400940:CDS |
ATATTTCAGGGACATTCCGA+TGG | 0.579686 | tig0022494:-45938 | Msa1400940:CDS |
AATTCATAGGGTCTATGTTG+TGG | 0.580570 | tig0022494:-44887 | Msa1400940:CDS |
CCTTTGCCTGCTTCAAACCA+AGG | 0.581002 | tig0022494:-47041 | Msa1400940:intron |
CTTCAATGGTTCGAAAGTTG+GGG | 0.582143 | tig0022494:-45750 | Msa1400940:CDS |
ACACAGAGAGAGAAAAGAAG+AGG | 0.584820 | tig0022494:-47219 | Msa1400940:CDS |
TGACAAAGAGCAAATTCATA+GGG | 0.586419 | tig0022494:-44899 | Msa1400940:CDS |
GAAATCACCAAAATAGCCGT+GGG | 0.590135 | tig0022494:+44798 | None:intergenic |
GATGGACTCCTAGGGGATGG+AGG | 0.592826 | tig0022494:+46218 | None:intergenic |
AGAAATCACCAAAATAGCCG+TGG | 0.598829 | tig0022494:+44797 | None:intergenic |
AGCACTTGCACTGGTTGGAG+TGG | 0.599023 | tig0022494:+46196 | None:intergenic |
GGGGTGCCTGTAATCAAAAG+AGG | 0.599309 | tig0022494:-45396 | Msa1400940:CDS |
GTTCACCTTATTATGACTAG+CGG | 0.600070 | tig0022494:-44461 | Msa1400940:three_prime_UTR |
GGAGTCCAGAAGCCAAACTT+GGG | 0.600493 | tig0022494:-47160 | Msa1400940:CDS |
GCCAACATATGAATCACGGC+GGG | 0.600876 | tig0022494:+45786 | None:intergenic |
AGTCTGAACCTCCATCCCCT+AGG | 0.601038 | tig0022494:-46226 | Msa1400940:CDS |
AGAAGAGGGAATAATGGCAA+TGG | 0.605880 | tig0022494:-47204 | Msa1400940:CDS |
TCTATGTTGTGGACGATGAT+GGG | 0.613189 | tig0022494:-44876 | Msa1400940:CDS |
AAGCAAGAAACGGAGCCCAT+CGG | 0.613620 | tig0022494:+45922 | None:intergenic |
AGATCTATGGGATGTTCAAG+AGG | 0.614406 | tig0022494:-47126 | Msa1400940:CDS |
CACTAAGAGATATCATCTCA+AGG | 0.615021 | tig0022494:-44834 | Msa1400940:CDS |
TTCTGCCAACATATGAATCA+CGG | 0.617203 | tig0022494:+45782 | None:intergenic |
AGTGTTCCTGTGGTAGACTT+GGG | 0.619646 | tig0022494:-45840 | Msa1400940:CDS |
GTTCGAAAGTTGGGGAACCA+AGG | 0.622320 | tig0022494:-45742 | Msa1400940:CDS |
CTACAATGAGAGAGATGCCA+AGG | 0.623153 | tig0022494:-47181 | Msa1400940:CDS |
CCAGCACCCAAGTCTACCAC+AGG | 0.626540 | tig0022494:+45834 | None:intergenic |
AAGTTGTCGCTGCAGATCCG+AGG | 0.626836 | tig0022494:+46120 | None:intergenic |
AGTTGGATTGATAGATACAT+CGG | 0.633207 | tig0022494:-46608 | Msa1400940:CDS |
TATTTCAGGGACATTCCGAT+GGG | 0.633257 | tig0022494:-45937 | Msa1400940:CDS |
AAAAGTATTTCCGTTTGCTG+CGG | 0.635232 | tig0022494:+46166 | None:intergenic |
CAAAATGAAGAGTGTTCCTG+TGG | 0.635403 | tig0022494:-45850 | Msa1400940:CDS |
TGGAGTGGATGGACTCCTAG+GGG | 0.642969 | tig0022494:+46211 | None:intergenic |
GTGCCTGTAATCAAAAGAGG+TGG | 0.647223 | tig0022494:-45393 | Msa1400940:CDS |
GCTTATATTACCAACTGCCG+TGG | 0.652654 | tig0022494:+45368 | None:intergenic |
GACGCCAAAACAGATCATCA+AGG | 0.655091 | tig0022494:-45691 | Msa1400940:intron |
TGAACTTTATAAGAACACCA+AGG | 0.657415 | tig0022494:-46066 | Msa1400940:intron |
ATAGCAGGGTTTAACAGACA+TGG | 0.671919 | tig0022494:-44747 | Msa1400940:exon |
CTCCAAGTAGCTTCTAACGG+AGG | 0.681992 | tig0022494:+45005 | None:intergenic |
AGGCTAGTACATGAACCCCA+CGG | 0.706623 | tig0022494:-44814 | Msa1400940:CDS |
ATAATCATGATAGATTTCTG+GGG | 0.708208 | tig0022494:+45317 | None:intergenic |
TGCCAACATATGAATCACGG+CGG | 0.717560 | tig0022494:+45785 | None:intergenic |
AATCAAAAGAGGTGGCACCA+CGG | 0.732628 | tig0022494:-45385 | Msa1400940:CDS |
AAATCACCAAAATAGCCGTG+GGG | 0.760400 | tig0022494:+44799 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTCAGTTTATTATTAT+GGG | - | tig0022494:44447-44466 | Msa1400940:three_prime_UTR | 10.0% |
!! | AAAAATATGTATTTATCTTC+AGG | - | tig0022494:47126-47145 | Msa1400940:CDS | 15.0% |
!!! | ATTTTGCAAAATTTACATCA+TGG | - | tig0022494:44896-44915 | Msa1400940:CDS | 20.0% |
!!! | TTAATACATGTACTTTTTGT+TGG | - | tig0022494:45401-45420 | Msa1400940:CDS | 20.0% |
!! | TATAATCATGATAGATTTCT+GGG | + | tig0022494:46462-46481 | None:intergenic | 20.0% |
!! | TTTCATTACTTAATACTCAT+TGG | - | tig0022494:46703-46722 | Msa1400940:CDS | 20.0% |
!!! | TTTTTGAAATAATTCTTCAG+AGG | - | tig0022494:47096-47115 | Msa1400940:CDS | 20.0% |
!! | ATTCTAACATTAGTTAAAAC+AGG | + | tig0022494:47208-47227 | None:intergenic | 20.0% |
!!! | TGTTTTAACTAATGTTAGAA+TGG | - | tig0022494:47207-47226 | Msa1400940:CDS | 20.0% |
!!! | GTTTTAACTAATGTTAGAAT+GGG | - | tig0022494:47208-47227 | Msa1400940:CDS | 20.0% |
! | ATGAAAATTATGTGCATGTT+TGG | - | tig0022494:44834-44853 | Msa1400940:CDS | 25.0% |
! | ACACAAAATAACACATCAAT+TGG | + | tig0022494:44983-45002 | None:intergenic | 25.0% |
!!! | TGTGTGTGTATGTTTTTTTT+AGG | - | tig0022494:44998-45017 | Msa1400940:CDS | 25.0% |
! | TCACTTTCAGAATAAAAATG+AGG | - | tig0022494:45268-45287 | Msa1400940:intron | 25.0% |
! | AGAAGGATGAATTTAATACA+TGG | - | tig0022494:45425-45444 | Msa1400940:CDS | 25.0% |
!! | TGGATTATTTCATTCTTTTC+AGG | - | tig0022494:46297-46316 | Msa1400940:intron | 25.0% |
! | ATAATCATGATAGATTTCTG+GGG | + | tig0022494:46461-46480 | None:intergenic | 25.0% |
! | CTATAATCATGATAGATTTC+TGG | + | tig0022494:46463-46482 | None:intergenic | 25.0% |
! | CAGAAATCTATCATGATTAT+AGG | - | tig0022494:46461-46480 | Msa1400940:intron | 25.0% |
! | GAAAAAAGATATTAGCAATG+TGG | + | tig0022494:46662-46681 | None:intergenic | 25.0% |
! | TAATGAATTCACTTGACATT+GGG | + | tig0022494:46813-46832 | None:intergenic | 25.0% |
! | TGAATTCATTACATGCAAAA+GGG | - | tig0022494:46822-46841 | Msa1400940:intron | 25.0% |
!!! | TATTTTGGTGATTTCTTTGA+TGG | - | tig0022494:46985-47004 | Msa1400940:intron | 25.0% |
!! | CTTTTATGTACTGTAAATTC+TGG | - | tig0022494:47232-47251 | Msa1400940:exon | 25.0% |
ATTATTATGGGACAATGTGT+TGG | - | tig0022494:44459-44478 | Msa1400940:three_prime_UTR | 30.0% | |
TTATTATGGGACAATGTGTT+GGG | - | tig0022494:44460-44479 | Msa1400940:three_prime_UTR | 30.0% | |
CAAGCATTAAGTTTGTCATT+AGG | + | tig0022494:44686-44705 | None:intergenic | 30.0% | |
ATATACACACTAAACTACCT+TGG | + | tig0022494:44754-44773 | None:intergenic | 30.0% | |
TATATGTATGTATGTCTGTG+TGG | - | tig0022494:44769-44788 | Msa1400940:CDS | 30.0% | |
! | CATGCACATAATTTTCATCT+GGG | + | tig0022494:44832-44851 | None:intergenic | 30.0% |
! | ACATGCACATAATTTTCATC+TGG | + | tig0022494:44833-44852 | None:intergenic | 30.0% |
TTGCAAAATTTACATCATGG+TGG | - | tig0022494:44899-44918 | Msa1400940:CDS | 30.0% | |
AATAAAATCAGATGCTACCT+TGG | - | tig0022494:45067-45086 | Msa1400940:intron | 30.0% | |
AGTTGGATTGATAGATACAT+CGG | - | tig0022494:45167-45186 | Msa1400940:intron | 30.0% | |
TTGCAAGTTTCAGATTCATA+TGG | + | tig0022494:45307-45326 | None:intergenic | 30.0% | |
!! | ATGTACTTTTTGTTGGTAGA+AGG | - | tig0022494:45408-45427 | Msa1400940:CDS | 30.0% |
GAAAATCACTTCAATAGAAC+AGG | + | tig0022494:45482-45501 | None:intergenic | 30.0% | |
! | AGCTAATGTGATAATGTTGT+TGG | - | tig0022494:45525-45544 | Msa1400940:intron | 30.0% |
TGAACTTTATAAGAACACCA+AGG | - | tig0022494:45709-45728 | Msa1400940:CDS | 30.0% | |
AATACAAACTCATTAGTAGC+TGG | + | tig0022494:45776-45795 | None:intergenic | 30.0% | |
ACACACATTTAAGAAATGCA+GGG | + | tig0022494:46199-46218 | None:intergenic | 30.0% | |
CTTAAATGTGTGTGCATATA+TGG | - | tig0022494:46206-46225 | Msa1400940:CDS | 30.0% | |
AAGCTTACTTTACTTGAAAG+GGG | + | tig0022494:46254-46273 | None:intergenic | 30.0% | |
CAAGCTTACTTTACTTGAAA+GGG | + | tig0022494:46255-46274 | None:intergenic | 30.0% | |
ACAAGCTTACTTTACTTGAA+AGG | + | tig0022494:46256-46275 | None:intergenic | 30.0% | |
!!! | TCATTCTTTTCAGGTTTATG+AGG | - | tig0022494:46306-46325 | Msa1400940:intron | 30.0% |
TCATCTCTTTAAATGCTTGA+AGG | + | tig0022494:46342-46361 | None:intergenic | 30.0% | |
TTCAAGCATTTAAAGAGATG+AGG | - | tig0022494:46341-46360 | Msa1400940:intron | 30.0% | |
TTAAAGAGATGAGGAAAAAG+AGG | - | tig0022494:46350-46369 | Msa1400940:intron | 30.0% | |
TAAAGAGATGAGGAAAAAGA+GGG | - | tig0022494:46351-46370 | Msa1400940:intron | 30.0% | |
! | ATCACAATTTAAAACCTCTG+TGG | + | tig0022494:46494-46513 | None:intergenic | 30.0% |
AACATTTCTCAGCAAAATCA+AGG | + | tig0022494:46535-46554 | None:intergenic | 30.0% | |
CTGAGAAATGTTGTCAAATA+TGG | - | tig0022494:46543-46562 | Msa1400940:intron | 30.0% | |
! | CTAGACACAGTTCTAATAAA+AGG | + | tig0022494:46638-46657 | None:intergenic | 30.0% |
GTAATGAATTCACTTGACAT+TGG | + | tig0022494:46814-46833 | None:intergenic | 30.0% | |
GTGAATTCATTACATGCAAA+AGG | - | tig0022494:46821-46840 | Msa1400940:intron | 30.0% | |
TTGACAAAGAGCAAATTCAT+AGG | - | tig0022494:46875-46894 | Msa1400940:intron | 30.0% | |
TGACAAAGAGCAAATTCATA+GGG | - | tig0022494:46876-46895 | Msa1400940:intron | 30.0% | |
TCAAAGTTTGACAGAACTTA+TGG | + | tig0022494:47263-47282 | None:intergenic | 30.0% | |
GAGAAAAGAAGAGGGAATAA+TGG | - | tig0022494:44565-44584 | Msa1400940:three_prime_UTR | 35.0% | |
GATGAGAGTTGAAGATCTAT+GGG | - | tig0022494:44637-44656 | Msa1400940:three_prime_UTR | 35.0% | |
!! | TGATTGGTTTGTCAGAATCA+TGG | + | tig0022494:44929-44948 | None:intergenic | 35.0% |
!! | AGTTTGCTGGAATTGTTGTA+TGG | - | tig0022494:45198-45217 | Msa1400940:intron | 35.0% |
! | TGTTGTATGGATTTTGCATC+AGG | - | tig0022494:45211-45230 | Msa1400940:intron | 35.0% |
!! | AAAAGTATTTCCGTTTGCTG+CGG | + | tig0022494:45612-45631 | None:intergenic | 35.0% |
!!! | AACTTCTGGAAACTTTTTCG+AGG | - | tig0022494:45673-45692 | Msa1400940:intron | 35.0% |
TAGACATTGCAAAACAACCT+TGG | + | tig0022494:45729-45748 | None:intergenic | 35.0% | |
!!! | TAGCTAACTTTTTCGCAAAC+AGG | - | tig0022494:45808-45827 | Msa1400940:CDS | 35.0% |
AAACAGGTTCGAGATATTTC+AGG | - | tig0022494:45824-45843 | Msa1400940:CDS | 35.0% | |
AACAGGTTCGAGATATTTCA+GGG | - | tig0022494:45825-45844 | Msa1400940:CDS | 35.0% | |
TTCTGCCAACATATGAATCA+CGG | + | tig0022494:45996-46015 | None:intergenic | 35.0% | |
ACTTCAATGGTTCGAAAGTT+GGG | - | tig0022494:46024-46043 | Msa1400940:intron | 35.0% | |
TGCAGAATTCATACTTGACA+AGG | + | tig0022494:46146-46165 | None:intergenic | 35.0% | |
CACACACATTTAAGAAATGC+AGG | + | tig0022494:46200-46219 | None:intergenic | 35.0% | |
GATCTTGATGAACTTGACAA+TGG | - | tig0022494:46277-46296 | Msa1400940:intron | 35.0% | |
TCTTTAAATGCTTGAAGGAC+TGG | + | tig0022494:46337-46356 | None:intergenic | 35.0% | |
TGACAGAACTATTACAGTGA+AGG | - | tig0022494:46738-46757 | Msa1400940:intron | 35.0% | |
AATTCATAGGGTCTATGTTG+TGG | - | tig0022494:46888-46907 | Msa1400940:intron | 35.0% | |
! | TTAGTGTGATTAGTCCTTCA+AGG | + | tig0022494:46927-46946 | None:intergenic | 35.0% |
CACTAAGAGATATCATCTCA+AGG | - | tig0022494:46941-46960 | Msa1400940:intron | 35.0% | |
GTTCACCTTATTATGACTAG+CGG | - | tig0022494:47314-47333 | Msa1400940:five_prime_UTR | 35.0% | |
TCTTTCCGCTAGTCATAATA+AGG | + | tig0022494:47322-47341 | None:intergenic | 35.0% | |
ACACAGAGAGAGAAAAGAAG+AGG | - | tig0022494:44556-44575 | Msa1400940:three_prime_UTR | 40.0% | |
CACAGAGAGAGAAAAGAAGA+GGG | - | tig0022494:44557-44576 | Msa1400940:three_prime_UTR | 40.0% | |
AGAAGAGGGAATAATGGCAA+TGG | - | tig0022494:44571-44590 | Msa1400940:three_prime_UTR | 40.0% | |
TTCAACTCTCATCCCAAGTT+TGG | + | tig0022494:44630-44649 | None:intergenic | 40.0% | |
GGATGAGAGTTGAAGATCTA+TGG | - | tig0022494:44636-44655 | Msa1400940:three_prime_UTR | 40.0% | |
AGATCTATGGGATGTTCAAG+AGG | - | tig0022494:44649-44668 | Msa1400940:three_prime_UTR | 40.0% | |
! | AAACTACCTTGGTTTGAAGC+AGG | + | tig0022494:44743-44762 | None:intergenic | 40.0% |
TCTGACAAACCAATCAACTG+TGG | - | tig0022494:44933-44952 | Msa1400940:CDS | 40.0% | |
TGTTTGGTACCACAGTTGAT+TGG | + | tig0022494:44945-44964 | None:intergenic | 40.0% | |
GTCACATACACATGCATGTT+TGG | + | tig0022494:44961-44980 | None:intergenic | 40.0% | |
! | TATTTTCACAGCTTCAGCCA+AGG | + | tig0022494:45087-45106 | None:intergenic | 40.0% |
GGCTGAAGCTGTGAAAATAT+TGG | - | tig0022494:45088-45107 | Msa1400940:intron | 40.0% | |
TCAATCCAACTAGCATCTTC+AGG | + | tig0022494:45158-45177 | None:intergenic | 40.0% | |
ATCGGAATAGTTGAGTTTGC+TGG | - | tig0022494:45185-45204 | Msa1400940:intron | 40.0% | |
ATATTTCAGGGACATTCCGA+TGG | - | tig0022494:45837-45856 | Msa1400940:CDS | 40.0% | |
TATTTCAGGGACATTCCGAT+GGG | - | tig0022494:45838-45857 | Msa1400940:CDS | 40.0% | |
GATCTCTCCAAAGCAAGAAA+CGG | + | tig0022494:45866-45885 | None:intergenic | 40.0% | |
!! | CAAAATGAAGAGTGTTCCTG+TGG | - | tig0022494:45925-45944 | Msa1400940:CDS | 40.0% |
ACTTTCGAACCATTGAAGTC+CGG | + | tig0022494:46023-46042 | None:intergenic | 40.0% | |
GACTTCAATGGTTCGAAAGT+TGG | - | tig0022494:46023-46042 | Msa1400940:intron | 40.0% | |
CTTCAATGGTTCGAAAGTTG+GGG | - | tig0022494:46025-46044 | Msa1400940:intron | 40.0% | |
ACCAAGGAACTATCTGATGT+TGG | - | tig0022494:46049-46068 | Msa1400940:intron | 40.0% | |
ACCAACATCAGATAGTTCCT+TGG | + | tig0022494:46053-46072 | None:intergenic | 40.0% | |
!! | CACACCTTGATGATCTGTTT+TGG | + | tig0022494:46091-46110 | None:intergenic | 40.0% |
GACAAGGTTCAATGCAATGA+GGG | + | tig0022494:46130-46149 | None:intergenic | 40.0% | |
TGACAAGGTTCAATGCAATG+AGG | + | tig0022494:46131-46150 | None:intergenic | 40.0% | |
TTATAGGTATGTCACCACAG+AGG | - | tig0022494:46477-46496 | Msa1400940:intron | 40.0% | |
CTCAGCAAAATCAAGGATTG+TGG | + | tig0022494:46528-46547 | None:intergenic | 40.0% | |
GTTGTCAAATATGGCTGATG+CGG | - | tig0022494:46552-46571 | Msa1400940:intron | 40.0% | |
CTTCTCCAAGTAGCTTCTAA+CGG | + | tig0022494:46776-46795 | None:intergenic | 40.0% | |
TCTATGTTGTGGACGATGAT+GGG | - | tig0022494:46899-46918 | Msa1400940:intron | 40.0% | |
AAATCACCAAAATAGCCGTG+GGG | + | tig0022494:46979-46998 | None:intergenic | 40.0% | |
GAAATCACCAAAATAGCCGT+GGG | + | tig0022494:46980-46999 | None:intergenic | 40.0% | |
AGAAATCACCAAAATAGCCG+TGG | + | tig0022494:46981-47000 | None:intergenic | 40.0% | |
TGTTAAACCCTGCTATTAGC+AGG | + | tig0022494:47024-47043 | None:intergenic | 40.0% | |
ATAGCAGGGTTTAACAGACA+TGG | - | tig0022494:47028-47047 | Msa1400940:intron | 40.0% | |
! | CAGGTTGAAGATGTGTATCT+AGG | - | tig0022494:47145-47164 | Msa1400940:CDS | 40.0% |
CTACAATGAGAGAGATGCCA+AGG | - | tig0022494:44594-44613 | Msa1400940:three_prime_UTR | 45.0% | |
GGCAAAGGAAAAGCAGAAAC+AGG | + | tig0022494:44722-44741 | None:intergenic | 45.0% | |
TATTCTGAGTGCACCTGTTG+TGG | - | tig0022494:45121-45140 | Msa1400940:intron | 45.0% | |
ATGCACCTGAAGATGCTAGT+TGG | - | tig0022494:45150-45169 | Msa1400940:intron | 45.0% | |
CTTAGAAAGCAGCAAGAGCA+TGG | + | tig0022494:45903-45922 | None:intergenic | 45.0% | |
AGTGTTCCTGTGGTAGACTT+GGG | - | tig0022494:45935-45954 | Msa1400940:CDS | 45.0% | |
TGCCAACATATGAATCACGG+CGG | + | tig0022494:45993-46012 | None:intergenic | 45.0% | |
CATATGTTGGCAGAATGTGC+CGG | - | tig0022494:46001-46020 | Msa1400940:intron | 45.0% | |
!!! | ATCTGTTTTGGCGTCACAAG+GGG | + | tig0022494:46079-46098 | None:intergenic | 45.0% |
!!! | GATCTGTTTTGGCGTCACAA+GGG | + | tig0022494:46080-46099 | None:intergenic | 45.0% |
!!! | TGATCTGTTTTGGCGTCACA+AGG | + | tig0022494:46081-46100 | None:intergenic | 45.0% |
GACGCCAAAACAGATCATCA+AGG | - | tig0022494:46084-46103 | Msa1400940:CDS | 45.0% | |
GAGATGAGGAAAAAGAGGGT+TGG | - | tig0022494:46355-46374 | Msa1400940:intron | 45.0% | |
ATGAGGAAAAAGAGGGTTGG+AGG | - | tig0022494:46358-46377 | Msa1400940:intron | 45.0% | |
TGAGGAAAAAGAGGGTTGGA+GGG | - | tig0022494:46359-46378 | Msa1400940:intron | 45.0% | |
GTGCCTGTAATCAAAAGAGG+TGG | - | tig0022494:46382-46401 | Msa1400940:intron | 45.0% | |
!! | GTGCCACCTCTTTTGATTAC+AGG | + | tig0022494:46388-46407 | None:intergenic | 45.0% |
AATCAAAAGAGGTGGCACCA+CGG | - | tig0022494:46390-46409 | Msa1400940:intron | 45.0% | |
GCTTATATTACCAACTGCCG+TGG | + | tig0022494:46410-46429 | None:intergenic | 45.0% | |
GATGTCTTTGACCGTGATTG+AGG | + | tig0022494:46578-46597 | None:intergenic | 45.0% | |
AAGGTCTGCATCCACAATTC+AGG | + | tig0022494:46619-46638 | None:intergenic | 45.0% | |
GTCTATGTTGTGGACGATGA+TGG | - | tig0022494:46898-46917 | Msa1400940:intron | 45.0% | |
! | AGTTTGGCTTCTGGACTCCT+TGG | + | tig0022494:44614-44633 | None:intergenic | 50.0% |
AGGAGTCCAGAAGCCAAACT+TGG | - | tig0022494:44614-44633 | Msa1400940:three_prime_UTR | 50.0% | |
GGAGTCCAGAAGCCAAACTT+GGG | - | tig0022494:44615-44634 | Msa1400940:three_prime_UTR | 50.0% | |
! | CTCATCCCAAGTTTGGCTTC+TGG | + | tig0022494:44623-44642 | None:intergenic | 50.0% |
! | CCTTGGTTTGAAGCAGGCAA+AGG | + | tig0022494:44737-44756 | None:intergenic | 50.0% |
CCTTTGCCTGCTTCAAACCA+AGG | - | tig0022494:44734-44753 | Msa1400940:three_prime_UTR | 50.0% | |
GGTGCATCAACATCCACAAC+AGG | + | tig0022494:45137-45156 | None:intergenic | 50.0% | |
! | TTGGAGTGGATGGACTCCTA+GGG | + | tig0022494:45568-45587 | None:intergenic | 50.0% |
! | GCAATAGCACTTGCACTGGT+TGG | + | tig0022494:45587-45606 | None:intergenic | 50.0% |
AAGCAAGAAACGGAGCCCAT+CGG | + | tig0022494:45856-45875 | None:intergenic | 50.0% | |
ATGGGCTCCGTTTCTTGCTT+TGG | - | tig0022494:45856-45875 | Msa1400940:CDS | 50.0% | |
GAGTGTTCCTGTGGTAGACT+TGG | - | tig0022494:45934-45953 | Msa1400940:CDS | 50.0% | |
ACCCGCCGTGATTCATATGT+TGG | - | tig0022494:45988-46007 | Msa1400940:intron | 50.0% | |
GCCAACATATGAATCACGGC+GGG | + | tig0022494:45992-46011 | None:intergenic | 50.0% | |
CAGAATGTGCCGGACTTCAA+TGG | - | tig0022494:46011-46030 | Msa1400940:intron | 50.0% | |
GTTCGAAAGTTGGGGAACCA+AGG | - | tig0022494:46033-46052 | Msa1400940:intron | 50.0% | |
GAGGAAAAAGAGGGTTGGAG+GGG | - | tig0022494:46360-46379 | Msa1400940:intron | 50.0% | |
! | GGGGTGCCTGTAATCAAAAG+AGG | - | tig0022494:46379-46398 | Msa1400940:intron | 50.0% |
ACAATTCAGGTCGTGACGCA+AGG | + | tig0022494:46606-46625 | None:intergenic | 50.0% | |
TTGCGTCACGACCTGAATTG+TGG | - | tig0022494:46605-46624 | Msa1400940:CDS | 50.0% | |
AGTAGCTTCTAACGGAGGTC+AGG | + | tig0022494:46768-46787 | None:intergenic | 50.0% | |
GACCTCCGTTAGAAGCTACT+TGG | - | tig0022494:46768-46787 | Msa1400940:intron | 50.0% | |
CTCCAAGTAGCTTCTAACGG+AGG | + | tig0022494:46773-46792 | None:intergenic | 50.0% | |
!! | GACGATGATGGGAACCTTGA+AGG | - | tig0022494:46910-46929 | Msa1400940:intron | 50.0% |
AGGCTAGTACATGAACCCCA+CGG | - | tig0022494:46961-46980 | Msa1400940:intron | 50.0% | |
! | CATGAACCCCACGGCTATTT+TGG | - | tig0022494:46970-46989 | Msa1400940:intron | 50.0% |
TCCCTCTACCTGCTAATAGC+AGG | - | tig0022494:47013-47032 | Msa1400940:intron | 50.0% | |
CCCTGCTATTAGCAGGTAGA+GGG | + | tig0022494:47017-47036 | None:intergenic | 50.0% | |
CCCTCTACCTGCTAATAGCA+GGG | - | tig0022494:47014-47033 | Msa1400940:intron | 50.0% | |
ACCCTGCTATTAGCAGGTAG+AGG | + | tig0022494:47018-47037 | None:intergenic | 50.0% | |
AGTCTGAACCTCCATCCCCT+AGG | - | tig0022494:45549-45568 | Msa1400940:intron | 55.0% | |
! | TGGAGTGGATGGACTCCTAG+GGG | + | tig0022494:45567-45586 | None:intergenic | 55.0% |
! | GTTGGAGTGGATGGACTCCT+AGG | + | tig0022494:45569-45588 | None:intergenic | 55.0% |
!! | CTTGCACTGGTTGGAGTGGA+TGG | + | tig0022494:45578-45597 | None:intergenic | 55.0% |
!! | AGCACTTGCACTGGTTGGAG+TGG | + | tig0022494:45582-45601 | None:intergenic | 55.0% |
GGCTGCAATAGCACTTGCAC+TGG | + | tig0022494:45591-45610 | None:intergenic | 55.0% | |
GCTATTGCAGCCGCAGCAAA+CGG | - | tig0022494:45599-45618 | Msa1400940:intron | 55.0% | |
GCTCGAGAACTCGAAGCCTT+AGG | - | tig0022494:45632-45651 | Msa1400940:intron | 55.0% | |
GAACTCGAAGCCTTAGGCCT+CGG | - | tig0022494:45638-45657 | Msa1400940:intron | 55.0% | |
AAGTTGTCGCTGCAGATCCG+AGG | + | tig0022494:45658-45677 | None:intergenic | 55.0% | |
GGATCTGCAGCGACAACTTC+TGG | - | tig0022494:45659-45678 | Msa1400940:intron | 55.0% | |
! | GATGGACTCCTAGGGGATGG+AGG | + | tig0022494:45560-45579 | None:intergenic | 60.0% |
! | GTGGATGGACTCCTAGGGGA+TGG | + | tig0022494:45563-45582 | None:intergenic | 60.0% |
CCAGCACCCAAGTCTACCAC+AGG | + | tig0022494:45944-45963 | None:intergenic | 60.0% | |
CCTGTGGTAGACTTGGGTGC+TGG | - | tig0022494:45941-45960 | Msa1400940:CDS | 60.0% | |
GGCTGATGCGGCCTCAATCA+CGG | - | tig0022494:46564-46583 | Msa1400940:intron | 60.0% | |
CGCTGCAGATCCGAGGCCTA+AGG | + | tig0022494:45651-45670 | None:intergenic | 65.0% | |
AGAGGTGGCACCACGGCAGT+TGG | - | tig0022494:46397-46416 | Msa1400940:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0022494 | gene | 44447 | 47350 | 44447 | ID=Msa1400940;Name=Msa1400940 |
tig0022494 | mRNA | 44447 | 47350 | 44447 | ID=Msa1400940-mRNA-1;Parent=Msa1400940;Name=Msa1400940-mRNA-1;_AED=0.05;_eAED=0.05;_QI=101|1|1|1|1|1|6|309|432 |
tig0022494 | exon | 44447 | 45053 | 44447 | ID=Msa1400940-mRNA-1:exon:18032;Parent=Msa1400940-mRNA-1 |
tig0022494 | exon | 45315 | 45478 | 45315 | ID=Msa1400940-mRNA-1:exon:18031;Parent=Msa1400940-mRNA-1 |
tig0022494 | exon | 45692 | 45967 | 45692 | ID=Msa1400940-mRNA-1:exon:18030;Parent=Msa1400940-mRNA-1 |
tig0022494 | exon | 46067 | 46246 | 46067 | ID=Msa1400940-mRNA-1:exon:18029;Parent=Msa1400940-mRNA-1 |
tig0022494 | exon | 46565 | 46737 | 46565 | ID=Msa1400940-mRNA-1:exon:18028;Parent=Msa1400940-mRNA-1 |
tig0022494 | exon | 47042 | 47350 | 47042 | ID=Msa1400940-mRNA-1:exon:18027;Parent=Msa1400940-mRNA-1 |
tig0022494 | five_prime_UTR | 47250 | 47350 | 47250 | ID=Msa1400940-mRNA-1:five_prime_utr;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 47042 | 47249 | 47042 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 46565 | 46737 | 46565 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 46067 | 46246 | 46067 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 45692 | 45967 | 45692 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 45315 | 45478 | 45315 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | CDS | 44756 | 45053 | 44756 | ID=Msa1400940-mRNA-1:cds;Parent=Msa1400940-mRNA-1 |
tig0022494 | three_prime_UTR | 44447 | 44755 | 44447 | ID=Msa1400940-mRNA-1:three_prime_utr;Parent=Msa1400940-mRNA-1 |
Gene Sequence |
Protein sequence |