AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0278160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278160 MtrunA17_Chr2g0291461 87.540 626 74 2 1 626 1 622 0.0 1098
Msa0278160 MtrunA17_Chr3g0120661 51.948 616 280 7 3 610 1 608 0.0 602
Msa0278160 MtrunA17_Chr3g0126111 40.354 565 302 11 61 610 57 601 2.20e-128 390
Msa0278160 MtrunA17_Chr8g0388051 37.843 547 264 17 111 624 28 531 2.79e-90 292
Msa0278160 MtrunA17_Chr5g0439311 37.427 513 278 14 111 609 31 514 4.99e-88 283
Msa0278160 MtrunA17_Chr3g0142501 34.775 555 279 17 77 594 14 522 4.39e-83 270
Msa0278160 MtrunA17_Chr3g0119821 36.653 502 266 17 111 598 35 498 1.14e-79 261
Msa0278160 MtrunA17_Chr4g0038131 36.686 507 255 16 111 593 28 492 1.83e-77 258
Msa0278160 MtrunA17_Chr8g0372031 35.766 548 281 18 74 593 20 524 1.30e-75 251
Msa0278160 MtrunA17_Chr1g0195271 35.088 513 268 17 103 594 29 497 3.18e-73 244
Msa0278160 MtrunA17_Chr1g0164201 37.251 502 253 17 111 594 25 482 1.12e-72 241
Msa0278160 MtrunA17_Chr3g0086311 36.290 496 259 16 111 594 30 480 3.95e-72 240
Msa0278160 MtrunA17_Chr3g0080171 37.132 509 247 19 111 596 25 483 4.58e-71 237
Msa0278160 MtrunA17_Chr8g0391391 36.832 505 255 19 111 594 30 491 7.87e-71 237
Msa0278160 MtrunA17_Chr4g0072811 54.497 189 83 1 436 621 8 196 5.93e-69 222
Msa0278160 MtrunA17_Chr5g0444721 32.500 560 272 19 111 593 34 564 9.09e-60 209
Msa0278160 MtrunA17_Chr5g0397181 31.481 432 245 12 178 596 2 395 1.52e-51 182
Msa0278160 MtrunA17_Chr3g0119371 50.746 201 78 5 111 307 40 223 1.70e-46 172
Msa0278160 MtrunA17_Chr3g0119371 37.915 211 119 6 408 609 316 523 1.29e-32 132
Msa0278160 MtrunA17_Chr3g0136381 32.061 393 213 14 111 494 30 377 1.36e-45 167
Msa0278160 MtrunA17_Chr5g0397201 39.303 201 114 4 404 598 299 497 4.67e-37 144
Msa0278160 MtrunA17_Chr5g0397201 43.750 160 73 3 111 270 40 182 1.65e-35 140
Msa0278160 MtrunA17_Chr4g0018351 47.368 152 59 6 111 261 30 161 1.05e-34 130
Msa0278160 MtrunA17_Chr4g0018361 47.805 205 85 8 111 307 27 217 6.34e-34 135
Msa0278160 MtrunA17_Chr4g0018361 39.429 175 99 3 421 590 314 486 2.72e-30 124
Msa0278160 MtrunA17_Chr7g0269571 41.875 160 78 3 449 594 52 210 3.53e-33 127
Msa0278160 MtrunA17_Chr3g0145261 43.000 200 92 6 111 306 24 205 2.62e-32 130
Msa0278160 MtrunA17_Chr3g0145261 39.683 189 106 4 408 591 297 482 1.15e-31 129
Msa0278160 MtrunA17_Chr4g0018301 42.079 202 92 7 111 307 45 226 6.78e-32 129
Msa0278160 MtrunA17_Chr4g0018301 38.251 183 105 4 413 590 315 494 5.91e-28 117
Msa0278160 MtrunA17_Chr4g0018341 41.477 176 95 5 420 590 101 273 1.24e-29 118
Msa0278160 MtrunA17_Chr1g0164181 40.361 166 85 6 433 591 171 329 7.54e-27 111
Msa0278160 MtrunA17_Chr1g0164181 39.773 176 82 5 159 330 4 159 1.97e-23 101
Msa0278160 MtrunA17_Chr4g0022271 44.961 129 61 4 449 573 29 151 4.69e-25 102
Msa0278160 MtrunA17_Chr3g0136371 50.000 88 41 2 494 578 1 88 1.05e-18 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278160 AT5G49720.1 73.171 615 148 8 3 610 1 605 0.0 856
Msa0278160 AT4G24260.1 66.451 617 191 9 3 613 1 607 0.0 757
Msa0278160 AT1G65610.1 49.845 646 279 10 3 626 1 623 0.0 589
Msa0278160 AT4G24260.3 63.581 497 167 7 3 494 1 488 0.0 564
Msa0278160 AT4G24260.2 61.451 441 156 7 3 438 1 432 3.58e-165 480
Msa0278160 AT4G11050.2 36.466 532 278 18 111 623 26 516 5.18e-86 279
Msa0278160 AT4G11050.1 36.466 532 278 18 111 623 26 516 2.27e-85 280
Msa0278160 AT4G11050.3 36.466 532 278 18 111 623 26 516 2.56e-85 280
Msa0278160 AT2G32990.1 37.728 493 264 14 111 590 39 501 4.09e-82 268
Msa0278160 AT1G02800.1 37.897 504 264 17 102 594 34 499 2.40e-77 255
Msa0278160 AT1G19940.2 37.251 502 267 14 101 588 33 500 1.21e-75 251
Msa0278160 AT1G19940.1 37.251 502 267 14 101 588 33 500 1.21e-75 251
Msa0278160 AT3G43860.2 37.475 499 251 17 111 595 34 485 1.88e-72 241
Msa0278160 AT3G43860.1 37.475 499 251 17 111 595 34 485 1.88e-72 241
Msa0278160 AT1G75680.1 36.939 490 250 13 112 584 58 505 1.04e-71 241
Msa0278160 AT1G71380.1 35.171 526 274 19 91 598 7 483 2.89e-71 238
Msa0278160 AT1G23210.1 35.872 499 257 19 111 590 28 482 3.41e-71 238
Msa0278160 AT1G70710.1 36.546 498 255 19 111 590 28 482 2.43e-70 236
Msa0278160 AT2G44570.1 35.729 501 264 16 111 594 33 492 6.34e-70 235
Msa0278160 AT1G22880.1 35.984 503 264 17 111 598 24 483 2.10e-68 231
Msa0278160 AT2G44550.1 35.352 512 277 15 92 591 18 487 2.94e-68 230
Msa0278160 AT2G44540.1 36.273 499 261 16 111 593 33 490 4.42e-68 230
Msa0278160 AT1G48930.1 36.527 501 253 16 111 588 30 488 1.21e-67 232
Msa0278160 AT4G39000.1 34.350 492 282 13 109 590 23 483 2.28e-65 223
Msa0278160 AT2G44560.1 35.857 502 261 17 111 594 33 491 1.03e-62 216
Msa0278160 AT4G02290.2 34.670 424 235 14 178 590 2 394 4.05e-50 179
Msa0278160 AT1G22880.2 33.486 436 237 16 178 598 2 399 4.34e-47 171
Msa0278160 AT1G64390.1 46.766 201 86 5 111 307 25 208 3.66e-43 164
Msa0278160 AT1G64390.1 38.785 214 116 6 409 617 302 505 1.78e-35 142
Msa0278160 AT1G19940.3 32.840 405 231 10 101 494 33 407 5.55e-40 152
Msa0278160 AT4G02290.1 48.756 201 80 7 111 307 52 233 2.86e-36 143
Msa0278160 AT4G02290.1 37.811 201 115 5 397 590 309 506 9.52e-34 135
Msa0278160 AT4G39010.2 39.216 204 103 6 111 310 29 215 3.57e-36 140
Msa0278160 AT2G44570.2 31.796 412 227 13 111 509 33 403 1.05e-35 139
Msa0278160 AT4G39010.1 39.801 201 100 6 111 307 29 212 1.41e-35 140
Msa0278160 AT4G39010.1 34.375 192 118 4 410 596 305 493 2.60e-23 104
Msa0278160 AT4G23560.1 38.350 206 117 4 398 595 276 479 2.63e-34 137
Msa0278160 AT4G23560.1 42.000 200 95 5 112 307 24 206 8.33e-33 132
Msa0278160 AT4G09740.1 36.816 201 120 3 398 593 276 474 2.93e-33 134
Msa0278160 AT4G09740.1 41.791 201 96 6 111 307 23 206 6.89e-32 129
Msa0278160 AT4G38990.1 40.435 230 111 8 87 312 4 211 1.01e-32 129
Msa0278160 AT1G22880.3 44.279 201 90 6 111 307 24 206 2.18e-31 125
Msa0278160 AT4G38990.2 41.071 224 106 8 87 306 4 205 3.81e-31 127
Msa0278160 AT4G38990.2 35.468 203 101 7 407 596 307 492 3.26e-24 107

Find 213 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAGCATGCTGGTGCTTTC+TGG 0.030264 2_3:-11083641 Msa0278160:CDS
ATGTCAAGGAACTCATTAAA+TGG 0.183035 2_3:-11084525 Msa0278160:CDS
ATAGCACCAACAAGTATATT+TGG 0.234626 2_3:+11082010 None:intergenic
ACTCTGTTGTGTTTCATCTA+AGG 0.237639 2_3:+11085622 None:intergenic
CTACTTTGATGAGTTTGTTT+GGG 0.270034 2_3:-11083733 Msa0278160:CDS
GCTCTATGGTGGACATGTTT+TGG 0.271567 2_3:+11082109 None:intergenic
CTAAGCATAACAATGTTTCT+TGG 0.282136 2_3:-11084738 Msa0278160:CDS
ATGAGTTATGTTGTTGGTTT+TGG 0.283064 2_3:-11082142 Msa0278160:CDS
TAAGCATGCTGGTGCTTTCT+GGG 0.283065 2_3:-11083640 Msa0278160:CDS
CCAACAAGTATATTTGGATT+TGG 0.289682 2_3:+11082016 None:intergenic
GTCCTTAGAATTTCTTCATA+TGG 0.292442 2_3:+11082944 None:intergenic
TTCTTCTTCTTCTGTTCTGT+TGG 0.299324 2_3:+11085587 None:intergenic
CTTAAGGTACGAGTTATTTC+CGG 0.300247 2_3:+11083686 None:intergenic
GAAGAAGAAATATGTAGATC+TGG 0.304734 2_3:-11085570 Msa0278160:CDS
GCTACTTTGATGAGTTTGTT+TGG 0.305582 2_3:-11083734 Msa0278160:CDS
CTGATTATGGTGTATTTAGC+TGG 0.306313 2_3:-11083611 Msa0278160:CDS
CTTGTTGGTGCTATGGTTGC+TGG 0.307017 2_3:-11082001 Msa0278160:CDS
ATAATAAAATAAAGAAAATA+AGG 0.307364 2_3:-11086030 Msa0278160:five_prime_UTR
CTGCTCTATCTAACTCGTTT+AGG 0.309550 2_3:+11085657 None:intergenic
CTGAGGTTGTTCTTGAGTCC+TGG 0.316309 2_3:-11082971 Msa0278160:CDS
TTATACTTAACCTTGTTCTT+TGG 0.320190 2_3:+11082076 None:intergenic
CATCAAGGTAATCACTGTAT+AGG 0.330172 2_3:+11082637 None:intergenic
TACACAGAGCCAACACTTGC+TGG 0.333046 2_3:-11081932 Msa0278160:CDS
TTGAGGAAAATTGAATTTGA+TGG 0.340631 2_3:+11084624 None:intergenic
GCTGGAGGTGGTGGTGGTGT+TGG 0.340634 2_3:+11081812 None:intergenic
ACAAGCAGCATGACACCTTA+TGG 0.344185 2_3:+11081779 None:intergenic
TTGGTATAGACGCGGCTCTA+TGG 0.345769 2_3:+11082095 None:intergenic
ATAAGTCCATTTGTGCTTGC+TGG 0.348759 2_3:+11085960 None:intergenic
TGTTTAAAGAATACAAGATT+TGG 0.351239 2_3:+11081507 None:intergenic
CTGTCGTAGTCAATGTCCTC+TGG 0.360196 2_3:+11083962 None:intergenic
CAGCTAAATACACCATAATC+AGG 0.360212 2_3:+11083612 None:intergenic
TCTAACTTGTTCATCTTTGT+CGG 0.360640 2_3:-11085779 Msa0278160:five_prime_UTR
ATCCATATGAAGAAATTCTA+AGG 0.362830 2_3:-11082946 Msa0278160:CDS
TGCGGAAATGTCCGCTGCCT+TGG 0.367817 2_3:-11083903 Msa0278160:CDS
ACACAACAGAGTTGGTTGTT+AGG 0.370926 2_3:-11085611 Msa0278160:CDS
ATGAACAAGTTTCTTTGAAT+AGG 0.372466 2_3:+11083847 None:intergenic
TTGCAGATTGATTACATCCT+TGG 0.384975 2_3:-11082181 Msa0278160:intron
AAGTCACTCGTGGTACTTGC+TGG 0.385487 2_3:+11081746 None:intergenic
GTTGGTGGGTATTATGATGC+TGG 0.385727 2_3:-11084652 Msa0278160:CDS
ACTGTATAGGGTAGCCAAAA+AGG 0.393463 2_3:+11082650 None:intergenic
TTCCATGGTGCTGGAGGTGG+TGG 0.395397 2_3:+11081803 None:intergenic
CCAAATCCAAATATACTTGT+TGG 0.400642 2_3:-11082016 Msa0278160:CDS
AGAGCAAGAGTATAATTATC+AGG 0.402604 2_3:+11085419 None:intergenic
ATCAAGGTAATCACTGTATA+GGG 0.404409 2_3:+11082638 None:intergenic
AGCATGCTGGTGCTTTCTGG+GGG 0.406915 2_3:-11083638 Msa0278160:CDS
CTGTTAAAGCTTGTGAAAAC+AGG 0.411486 2_3:+11082881 None:intergenic
TGTCAAGGAACTCATTAAAT+GGG 0.413319 2_3:-11084524 Msa0278160:CDS
TTCTCAGTTGAAAAGAAGTT+AGG 0.413973 2_3:+11082585 None:intergenic
CTCTGTTGTGTTTCATCTAA+GGG 0.416754 2_3:+11085623 None:intergenic
CCTTATGGTTTCCATGGTGC+TGG 0.418560 2_3:+11081794 None:intergenic
TATTCAAAGAAACTTGTTCA+TGG 0.422136 2_3:-11083845 Msa0278160:CDS
GTCCATTTGTGCTTGCTGGC+TGG 0.423308 2_3:+11085964 None:intergenic
AGGCTGCATTGACAACATAT+TGG 0.424579 2_3:+11082670 None:intergenic
AACTAATGCTGCTACTAAAC+CGG 0.425421 2_3:+11081904 None:intergenic
AAGATCTTTGTTTGGACTGT+TGG 0.429435 2_3:-11085527 Msa0278160:CDS
CATGGTGCTGGAGGTGGTGG+TGG 0.432973 2_3:+11081806 None:intergenic
TGGAAACCATCGTGCCTGTC+AGG 0.433046 2_3:+11081977 None:intergenic
CTATGGTTGCTGGTCCTGAC+AGG 0.437576 2_3:-11081991 Msa0278160:CDS
TTGTATCAACTGAAAGTTCA+CGG 0.439422 2_3:-11081698 Msa0278160:three_prime_UTR
AACCAGCCAGCAAGCACAAA+TGG 0.439769 2_3:-11085966 Msa0278160:five_prime_UTR
CATGCTGGTGCTTTCTGGGG+GGG 0.439779 2_3:-11083636 Msa0278160:CDS
TCAGCCGCAAGATCTTTGTT+TGG 0.440867 2_3:-11085535 Msa0278160:CDS
GGTGGTGGTGTTGGAAACAT+TGG 0.440946 2_3:+11081821 None:intergenic
AGCTGGGATAACAAGCTTGC+TGG 0.441802 2_3:-11083594 Msa0278160:CDS
ACTGTAAAGGTGGATGGAAA+TGG 0.442266 2_3:-11082054 Msa0278160:CDS
ATCTAGTTGGTTGTGGCTAA+TGG 0.444034 2_3:-11081636 Msa0278160:three_prime_UTR
CGGAAAATGAGTTATGTTGT+TGG 0.445105 2_3:-11082148 Msa0278160:CDS
GCCTGGATGTACTTTGCAAC+CGG 0.446779 2_3:-11083705 Msa0278160:CDS
CACTGAATGCCACAGTTGTT+CGG 0.447417 2_3:-11083933 Msa0278160:CDS
GGTTTCCATGGTGCTGGAGG+TGG 0.448512 2_3:+11081800 None:intergenic
TGAGGTTGTTCTTGAGTCCT+GGG 0.448873 2_3:-11082970 Msa0278160:CDS
CCTGGCATTGCTAAGCATGC+TGG 0.450207 2_3:-11083651 Msa0278160:CDS
TCTCTCTCTAGAATTAGAAA+TGG 0.451597 2_3:+11085886 None:intergenic
ATCCAGCAGTAGTGATCATT+AGG 0.452129 2_3:+11083989 None:intergenic
CTGTGCAGCAAGGGTGGTAA+TGG 0.452857 2_3:+11084459 None:intergenic
AAGCATGCTGGTGCTTTCTG+GGG 0.454250 2_3:-11083639 Msa0278160:CDS
TTGGTGGAACAGCAGAGAAA+AGG 0.454276 2_3:+11081840 None:intergenic
CAGGAGTAGTGGCAAGCTTA+AGG 0.455749 2_3:+11083670 None:intergenic
CAAGAAACATTGTTATGCTT+AGG 0.461228 2_3:+11084739 None:intergenic
TAACAAGCTTGCTGGTGCTC+AGG 0.466343 2_3:-11083586 Msa0278160:intron
TGTAGTTTGTTCGAACATCA+TGG 0.469686 2_3:+11081957 None:intergenic
AGAAACTCCGCGAGTTTGCC+AGG 0.474742 2_3:-11082566 Msa0278160:CDS
ATCTGCTGCAATCAAGGATC+TGG 0.476180 2_3:-11084674 Msa0278160:CDS
GCAGCATTAGTTGCATTGTC+AGG 0.476531 2_3:-11081893 Msa0278160:CDS
CATTACCACCCTTGCTGCAC+AGG 0.479244 2_3:-11084458 Msa0278160:intron
GTTCTTCGACAGGTTGGGAG+TGG 0.479621 2_3:-11084037 Msa0278160:intron
GAAGACAAGGCGATGAAGCT+TGG 0.480685 2_3:-11081667 Msa0278160:three_prime_UTR
TTGGTGGGTATTATGATGCT+GGG 0.481825 2_3:-11084651 Msa0278160:CDS
AGTTTGTTTGGGGAGGCGCC+TGG 0.482280 2_3:-11083722 Msa0278160:CDS
CTTGATGCTGCTGATACGCC+TGG 0.482529 2_3:-11082621 Msa0278160:CDS
CTCCTAATGATCACTACTGC+TGG 0.482652 2_3:-11083991 Msa0278160:CDS
CCAACACTTGCTGGAAATGC+CGG 0.482683 2_3:-11081923 Msa0278160:CDS
CTTAAGCTTGCCACTACTCC+TGG 0.484105 2_3:-11083669 Msa0278160:CDS
AAGAAGAAATATGTAGATCT+GGG 0.486755 2_3:-11085569 Msa0278160:CDS
TGATCCATGGGGAGGACCAT+TGG 0.494310 2_3:-11085726 Msa0278160:CDS
AAATATACTTGTTGGTGCTA+TGG 0.495395 2_3:-11082008 Msa0278160:CDS
AGTGGTAAATACGAAGCTAC+TGG 0.496133 2_3:-11084559 Msa0278160:CDS
GGATGTTTCTTATGATGTCT+AGG 0.503090 2_3:+11085446 None:intergenic
TGTCGTAGTCAATGTCCTCT+GGG 0.505003 2_3:+11083963 None:intergenic
ACTACACTCTTCAAGTTACC+AGG 0.507139 2_3:-11083818 Msa0278160:CDS
GCATGCTGGTGCTTTCTGGG+GGG 0.507842 2_3:-11083637 Msa0278160:CDS
TTTCCATCACCATGTTGAGT+TGG 0.509335 2_3:-11084597 Msa0278160:CDS
CATAACAATGTTTCTTGGAG+GGG 0.510147 2_3:-11084733 Msa0278160:CDS
TGGTGGAACAGCAGAGAAAA+GGG 0.513107 2_3:+11081841 None:intergenic
AGTATAACTGTAAAGGTGGA+TGG 0.515743 2_3:-11082060 Msa0278160:CDS
AACAATGGATGCAGCAGCCA+AGG 0.518436 2_3:+11083886 None:intergenic
CAACTGTGGCATTCAGTGAC+GGG 0.520565 2_3:+11083938 None:intergenic
CTCATGTATGCAAGATGGAA+AGG 0.522449 2_3:-11084707 Msa0278160:CDS
GCATAACAATGTTTCTTGGA+GGG 0.523741 2_3:-11084734 Msa0278160:CDS
CATGTACGGACGTGATCCAT+GGG 0.523967 2_3:-11085738 Msa0278160:CDS
CTTGGCCTAGTGAATCTAGT+TGG 0.524429 2_3:-11081649 Msa0278160:three_prime_UTR
CTTAGCAATGCCAGGAGTAG+TGG 0.528038 2_3:+11083659 None:intergenic
AAGGTTAAGTATAACTGTAA+AGG 0.529848 2_3:-11082067 Msa0278160:CDS
ATTTCCAATGGTCCTCCCCA+TGG 0.530493 2_3:+11085722 None:intergenic
TCCGGTTGCAAAGTACATCC+AGG 0.531023 2_3:+11083704 None:intergenic
CCAGCATGCTTAGCAATGCC+AGG 0.532470 2_3:+11083651 None:intergenic
TGGTGTATCTGCTGCAATCA+AGG 0.533290 2_3:-11084680 Msa0278160:CDS
TGATTATGGTGTATTTAGCT+GGG 0.534700 2_3:-11083610 Msa0278160:CDS
ATTGTAGAATGTTGAAGCCT+CGG 0.535663 2_3:+11083764 None:intergenic
ATGACACCTTATGGTTTCCA+TGG 0.539561 2_3:+11081788 None:intergenic
TGATTCAATTAAACCATGGT+AGG 0.541219 2_3:-11082704 Msa0278160:CDS
AGATTTGATATATATACCAT+TGG 0.541933 2_3:+11086068 None:intergenic
GGATGCAGCAGCCAAGGCAG+CGG 0.542599 2_3:+11083892 None:intergenic
AGGTTCTTCTTAGTCGTCTG+AGG 0.543161 2_3:-11082988 Msa0278160:CDS
GCAAGGGGATATACAGGAGA+TGG 0.544723 2_3:+11083124 None:intergenic
GCATGTACGGACGTGATCCA+TGG 0.545662 2_3:-11085739 Msa0278160:CDS
ATAATCAAAATGAGCATGTA+CGG 0.546258 2_3:-11085752 Msa0278160:exon
GTGGTAAATACGAAGCTACT+GGG 0.547379 2_3:-11084558 Msa0278160:CDS
CAGAGGACATTGACTACGAC+AGG 0.548568 2_3:-11083961 Msa0278160:CDS
AGAGTATAATTATCAGGAGG+AGG 0.548857 2_3:+11085425 None:intergenic
CCAGCACCATGGAAACCATA+AGG 0.549957 2_3:-11081794 Msa0278160:exon
TTTGATGAGTTTGTTTGGGG+AGG 0.550188 2_3:-11083729 Msa0278160:CDS
TCATGTATGCAAGATGGAAA+GGG 0.551818 2_3:-11084706 Msa0278160:CDS
CATGTCACGTACCTGTGTCC+TGG 0.552780 2_3:+11082548 None:intergenic
CAACAGATGAAGATCGTAGC+AGG 0.553339 2_3:-11085682 Msa0278160:CDS
GTTAAGTATAACTGTAAAGG+TGG 0.554905 2_3:-11082064 Msa0278160:CDS
AAATACAGGTAGAATGAAAG+AGG 0.556696 2_3:+11081421 None:intergenic
AACAAACTCATCAAAGTAGC+CGG 0.557410 2_3:+11083737 None:intergenic
AACTTGTTCATCTTTGTCGG+TGG 0.557869 2_3:-11085776 Msa0278160:five_prime_UTR
GATACGCCTGGATGGTATTG+TGG 0.559543 2_3:-11082609 Msa0278160:CDS
ACAAGCTTTAACAGAACCAA+AGG 0.560557 2_3:-11082872 Msa0278160:intron
GTTTGGTACCTGTGCAGCAA+GGG 0.560988 2_3:+11084450 None:intergenic
GTATCTACCTCTCTGATCCC+TGG 0.561021 2_3:+11083800 None:intergenic
CAGAGAGGTAGATACAGTAC+AGG 0.561976 2_3:-11083792 Msa0278160:CDS
GCTTGTGAAAACAGGTAGGT+AGG 0.564751 2_3:+11082889 None:intergenic
TAGATGAAACACAACAGAGT+TGG 0.565193 2_3:-11085619 Msa0278160:CDS
CCGGCATTTCCAGCAAGTGT+TGG 0.565438 2_3:+11081923 None:intergenic
TACTTTGATGAGTTTGTTTG+GGG 0.568462 2_3:-11083732 Msa0278160:CDS
AGCATAACAATGTTTCTTGG+AGG 0.569187 2_3:-11084735 Msa0278160:CDS
TGACTATGCTGGTCTGATTG+TGG 0.569674 2_3:+11082918 None:intergenic
TCAACATTCTACAATTCCAC+CGG 0.570927 2_3:-11083756 Msa0278160:CDS
CTAGTGAATCTAGTTGGTTG+TGG 0.572250 2_3:-11081643 Msa0278160:three_prime_UTR
ACAACATATTGGAGAGGCTG+AGG 0.573058 2_3:+11082681 None:intergenic
CAGGCGTATCAGCAGCATCA+AGG 0.574878 2_3:+11082622 None:intergenic
GTAAAGGTGGATGGAAATGG+AGG 0.575959 2_3:-11082051 Msa0278160:CDS
TCTGTTGCATTGATTTCCAA+TGG 0.576212 2_3:+11085710 None:intergenic
CGCGTCTATACCAAAGAACA+AGG 0.577197 2_3:-11082086 Msa0278160:CDS
CAATCAAGGATCTGGTTGGT+GGG 0.578075 2_3:-11084666 Msa0278160:CDS
GCAATCAAGGATCTGGTTGG+TGG 0.578640 2_3:-11084667 Msa0278160:CDS
CACGAGTGACTTGAGTGCAT+TGG 0.579702 2_3:-11081735 Msa0278160:three_prime_UTR
TTTGTTGTCTTTGAAAACAA+TGG 0.583160 2_3:+11083871 None:intergenic
ATTTCTTCATATGGATACCC+AGG 0.585341 2_3:+11082953 None:intergenic
GGAAACTCATGTATGCAAGA+TGG 0.586317 2_3:-11084712 Msa0278160:CDS
TGGTACCTGTGCAGCAAGGG+TGG 0.587991 2_3:+11084453 None:intergenic
GGTGGTGTTGGAAACATTGG+TGG 0.588268 2_3:+11081824 None:intergenic
GTATAGACGCGGCTCTATGG+TGG 0.588925 2_3:+11082098 None:intergenic
ACATCCTTGGTAAGAATCCA+CGG 0.589671 2_3:-11082168 Msa0278160:CDS
CAAGTTGAGATTATAGCCAA+TGG 0.590802 2_3:-11086084 Msa0278160:five_prime_UTR
ACTCCAACTCAACATGGTGA+TGG 0.592855 2_3:+11084594 None:intergenic
ATGCTGCTGATACGCCTGGA+TGG 0.594845 2_3:-11082617 Msa0278160:CDS
ACAACTGTGGCATTCAGTGA+CGG 0.594991 2_3:+11083937 None:intergenic
TATGCTGGTCTGATTGTGGA+AGG 0.596477 2_3:+11082922 None:intergenic
CAGTCCAAACAAAGATCTTG+CGG 0.598080 2_3:+11085531 None:intergenic
GGTTGGGAGTGGAGATACCT+CGG 0.599641 2_3:-11084026 Msa0278160:CDS
GTAGGAGCACATGACTATGC+TGG 0.601049 2_3:+11082907 None:intergenic
TATGGTTTCCATGGTGCTGG+AGG 0.601155 2_3:+11081797 None:intergenic
TGGTGGGTATTATGATGCTG+GGG 0.603229 2_3:-11084650 Msa0278160:CDS
GGTTTGGTACCTGTGCAGCA+AGG 0.603856 2_3:+11084449 None:intergenic
CTTGTTCTTTGGTATAGACG+CGG 0.606850 2_3:+11082087 None:intergenic
GTTGGGAGTGGAGATACCTC+GGG 0.611340 2_3:-11084025 Msa0278160:CDS
TTAGGTCCACAATACCATCC+AGG 0.613068 2_3:+11082603 None:intergenic
GGAGAGGCTGAGGCCTACCA+TGG 0.613076 2_3:+11082691 None:intergenic
CACAACCAACTAGATTCACT+AGG 0.617121 2_3:+11081644 None:intergenic
CACCACCACCTCCAGCACCA+TGG 0.620529 2_3:-11081805 Msa0278160:CDS
AGCTAAATACACCATAATCA+GGG 0.622190 2_3:+11083613 None:intergenic
TAAAGGTGGATGGAAATGGA+GGG 0.628440 2_3:-11082050 Msa0278160:CDS
TGGGGAGCTTAATCATGTCA+AGG 0.628998 2_3:-11084539 Msa0278160:CDS
CCGCGAGTTTGCCAGGACAC+AGG 0.631154 2_3:-11082559 Msa0278160:intron
ATGCAAGATGGAAAGGGTGA+TGG 0.633292 2_3:-11084700 Msa0278160:CDS
AATGACACTCCAACTCAACA+TGG 0.634481 2_3:+11084588 None:intergenic
GCTGCAATCAAGGATCTGGT+TGG 0.636855 2_3:-11084670 Msa0278160:CDS
TAAAGCTTGTGAAAACAGGT+AGG 0.638549 2_3:+11082885 None:intergenic
CAGTTGTTCGGATCTTGCTG+CGG 0.644632 2_3:-11083921 Msa0278160:CDS
GGCTTGATTCAATTAAACCA+TGG 0.652266 2_3:-11082708 Msa0278160:CDS
GCTGGTCCTGACAGGCACGA+TGG 0.652935 2_3:-11081983 Msa0278160:CDS
CCTGTGTCCTGGCAAACTCG+CGG 0.660009 2_3:+11082559 None:intergenic
CTACACTCTTCAAGTTACCA+GGG 0.660241 2_3:-11083817 Msa0278160:CDS
GCAAGAGTATAATTATCAGG+AGG 0.662678 2_3:+11085422 None:intergenic
TGGTAACTTGAAGAGTGTAG+TGG 0.665056 2_3:+11083820 None:intergenic
CAATGCACTCAAGTCACTCG+TGG 0.665221 2_3:+11081736 None:intergenic
AAACTCATCAAAGTAGCCGG+TGG 0.665346 2_3:+11083740 None:intergenic
GTCAAGGAACTCATTAAATG+GGG 0.667862 2_3:-11084523 Msa0278160:CDS
TACGGACGTGATCCATGGGG+AGG 0.669313 2_3:-11085734 Msa0278160:CDS
CAGCAAGATCCGAACAACTG+TGG 0.676043 2_3:+11083924 None:intergenic
CTACTGCTGGATGCGCCCAG+AGG 0.681358 2_3:-11083978 Msa0278160:CDS
GGGAGTGGAGATACCTCGGG+TGG 0.684356 2_3:-11084022 Msa0278160:CDS
GCATTGACAACATATTGGAG+AGG 0.690549 2_3:+11082675 None:intergenic
AGGAGTCGTACTACCACCCG+AGG 0.691703 2_3:+11084009 None:intergenic
TGGTAAATACGAAGCTACTG+GGG 0.693884 2_3:-11084557 Msa0278160:CDS
TGGAGTGTCATTGAGTACAG+TGG 0.695187 2_3:-11084577 Msa0278160:CDS
CAAGTTACCAGGGATCAGAG+AGG 0.712704 2_3:-11083807 Msa0278160:CDS
ATACAGTACAGGTAAGTCCG+AGG 0.723153 2_3:-11083781 Msa0278160:CDS
ATGTACGGACGTGATCCATG+GGG 0.737723 2_3:-11085737 Msa0278160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAATTGAAATGTTTTT+TGG + chr2_3:11084192-11084211 None:intergenic 10.0%
!!! TTTCTTCATTTTGTTTTATA+AGG - chr2_3:11082182-11082201 Msa0278160:intron 15.0%
!!! AATTTGTTTTTTGATGAAAA+TGG - chr2_3:11082598-11082617 Msa0278160:CDS 15.0%
!!! ATTTGTTTTTTGATGAAAAT+GGG - chr2_3:11082599-11082618 Msa0278160:CDS 15.0%
!!! TTGTAATTTGTAAAATGAAA+AGG + chr2_3:11084068-11084087 None:intergenic 15.0%
!! AGATTTGATATATATACCAT+TGG + chr2_3:11081444-11081463 None:intergenic 20.0%
!!! TTCATTTTGTTTTATAAGGA+AGG - chr2_3:11082186-11082205 Msa0278160:intron 20.0%
!!! TGATGAAAACAAGTTTTTTA+TGG - chr2_3:11082427-11082446 Msa0278160:intron 20.0%
!!! CTTTATACTATTAGTCTTTA+TGG + chr2_3:11082490-11082509 None:intergenic 20.0%
!!! ATTAATTTGATTTGTGTTTG+TGG - chr2_3:11082726-11082745 Msa0278160:intron 20.0%
!!! TTAATTTGATTTGTGTTTGT+GGG - chr2_3:11082727-11082746 Msa0278160:intron 20.0%
!! TTATATTTGAATGATAGTTG+CGG - chr2_3:11084091-11084110 Msa0278160:intron 20.0%
!!! AACATTTTTAACAAGTTGTT+TGG - chr2_3:11084137-11084156 Msa0278160:intron 20.0%
!!! AGTTTCTTTTATTCATATTC+TGG - chr2_3:11084219-11084238 Msa0278160:intron 20.0%
!!! GATTTCGACATTTTATATAT+AGG - chr2_3:11084501-11084520 Msa0278160:CDS 20.0%
!!! AAAAGGGTATTTTTATCAAT+TGG + chr2_3:11085655-11085674 None:intergenic 20.0%
!!! AATTAAGACTTTTGATAAAG+TGG - chr2_3:11085911-11085930 Msa0278160:five_prime_UTR 20.0%
!! TGTTTAAAGAATACAAGATT+TGG + chr2_3:11086005-11086024 None:intergenic 20.0%
! ATAATCAAAATGAGCATGTA+CGG - chr2_3:11081757-11081776 Msa0278160:three_prime_UTR 25.0%
! AAGAAGAAATATGTAGATCT+GGG - chr2_3:11081940-11081959 Msa0278160:CDS 25.0%
! TAGAATCAAAAAGAGCAAAA+GGG + chr2_3:11082160-11082179 None:intergenic 25.0%
! ATAGAATCAAAAAGAGCAAA+AGG + chr2_3:11082161-11082180 None:intergenic 25.0%
! GTTTGATTACTTGAAGAAAA+AGG - chr2_3:11082313-11082332 Msa0278160:intron 25.0%
! TTGAGGAAAATTGAATTTGA+TGG + chr2_3:11082888-11082907 None:intergenic 25.0%
!!! TATGTTTATTGTGTCGATTT+TGG - chr2_3:11083123-11083142 Msa0278160:intron 25.0%
!! TGATTTTGAATGAATCGATT+TGG + chr2_3:11083244-11083263 None:intergenic 25.0%
!! TAGAATTAGTTCTTTGTGTT+CGG - chr2_3:11083296-11083315 Msa0278160:intron 25.0%
!! TTTGTTGTCTTTGAAAACAA+TGG + chr2_3:11083641-11083660 None:intergenic 25.0%
! ATGAACAAGTTTCTTTGAAT+AGG + chr2_3:11083665-11083684 None:intergenic 25.0%
!! TATTCAAAGAAACTTGTTCA+TGG - chr2_3:11083664-11083683 Msa0278160:CDS 25.0%
!!! CAACTTGTTAAAAATGTTCA+AGG + chr2_3:11084135-11084154 None:intergenic 25.0%
! AGTGTGTGAATTTGAAAAAA+GGG + chr2_3:11084335-11084354 None:intergenic 25.0%
! TAGTGTGTGAATTTGAAAAA+AGG + chr2_3:11084336-11084355 None:intergenic 25.0%
! ATCCATATGAAGAAATTCTA+AGG - chr2_3:11084563-11084582 Msa0278160:CDS 25.0%
! AATTGGAAAATTGTAAACTC+TGG + chr2_3:11084697-11084716 None:intergenic 25.0%
! ATTTGCATCAGAATAGAAAT+TGG + chr2_3:11084756-11084775 None:intergenic 25.0%
!!! TTGGTATTTTTTATTCTCAC+AGG - chr2_3:11084777-11084796 Msa0278160:intron 25.0%
! TTATACTTAACCTTGTTCTT+TGG + chr2_3:11085436-11085455 None:intergenic 25.0%
! AAGGTTAAGTATAACTGTAA+AGG - chr2_3:11085442-11085461 Msa0278160:CDS 25.0%
!! TCTCTCTCTAGAATTAGAAA+TGG + chr2_3:11081626-11081645 None:intergenic 30.0%
!! TCTAACTTGTTCATCTTTGT+CGG - chr2_3:11081730-11081749 Msa0278160:three_prime_UTR 30.0%
GAAGAAGAAATATGTAGATC+TGG - chr2_3:11081939-11081958 Msa0278160:CDS 30.0%
! AGAGCAAGAGTATAATTATC+AGG + chr2_3:11082093-11082112 None:intergenic 30.0%
! AAGGGTAAGCTTACATTTTT+GGG + chr2_3:11082142-11082161 None:intergenic 30.0%
! AAAGGGTAAGCTTACATTTT+TGG + chr2_3:11082143-11082162 None:intergenic 30.0%
TTGATTACTTGATCTGATCT+GGG - chr2_3:11082462-11082481 Msa0278160:intron 30.0%
CAAGAAACATTGTTATGCTT+AGG + chr2_3:11082773-11082792 None:intergenic 30.0%
CTAAGCATAACAATGTTTCT+TGG - chr2_3:11082771-11082790 Msa0278160:intron 30.0%
ATGTCAAGGAACTCATTAAA+TGG - chr2_3:11082984-11083003 Msa0278160:CDS 30.0%
TGTCAAGGAACTCATTAAAT+GGG - chr2_3:11082985-11083004 Msa0278160:CDS 30.0%
AAATCCAAATCAAGAGTTGA+AGG + chr2_3:11083092-11083111 None:intergenic 30.0%
ATTTCGATACATTCAAGCAA+AGG + chr2_3:11083189-11083208 None:intergenic 30.0%
CTAATTCTATTACGTGTGTT+TGG + chr2_3:11083285-11083304 None:intergenic 30.0%
! CAATTTACCTTGTTGATTAC+TGG - chr2_3:11083415-11083434 Msa0278160:intron 30.0%
! CTACTTTGATGAGTTTGTTT+GGG - chr2_3:11083776-11083795 Msa0278160:CDS 30.0%
! TACTTTGATGAGTTTGTTTG+GGG - chr2_3:11083777-11083796 Msa0278160:CDS 30.0%
AGCTAAATACACCATAATCA+GGG + chr2_3:11083899-11083918 None:intergenic 30.0%
TGATTATGGTGTATTTAGCT+GGG - chr2_3:11083899-11083918 Msa0278160:CDS 30.0%
ATTGTTCAAAGCCAAGAAAA+AGG + chr2_3:11084311-11084330 None:intergenic 30.0%
AAATTATTATCCGCTTGCAA+GGG + chr2_3:11084418-11084437 None:intergenic 30.0%
GTCCTTAGAATTTCTTCATA+TGG + chr2_3:11084568-11084587 None:intergenic 30.0%
AATTGGAAAATCATGAACTC+TGG + chr2_3:11084739-11084758 None:intergenic 30.0%
TTCTATTCTGATGCAAATGT+TGG - chr2_3:11084758-11084777 Msa0278160:intron 30.0%
!!! GTATTTTTTATTCTCACAGG+AGG - chr2_3:11084780-11084799 Msa0278160:intron 30.0%
TGATTCAATTAAACCATGGT+AGG - chr2_3:11084805-11084824 Msa0278160:intron 30.0%
ATCAAGGTAATCACTGTATA+GGG + chr2_3:11084874-11084893 None:intergenic 30.0%
TTCTCAGTTGAAAAGAAGTT+AGG + chr2_3:11084927-11084946 None:intergenic 30.0%
! ACTGTTTTCATAAACTACTC+TGG + chr2_3:11085164-11085183 None:intergenic 30.0%
CGTCATAGTGATTTCAATTA+TGG + chr2_3:11085270-11085289 None:intergenic 30.0%
CAATCTGCAAAAATACAACA+CGG + chr2_3:11085318-11085337 None:intergenic 30.0%
!!! ATGAGTTATGTTGTTGGTTT+TGG - chr2_3:11085367-11085386 Msa0278160:intron 30.0%
GTTAAGTATAACTGTAAAGG+TGG - chr2_3:11085445-11085464 Msa0278160:CDS 30.0%
CCAACAAGTATATTTGGATT+TGG + chr2_3:11085496-11085515 None:intergenic 30.0%
CCAAATCCAAATATACTTGT+TGG - chr2_3:11085493-11085512 Msa0278160:CDS 30.0%
ATAGCACCAACAAGTATATT+TGG + chr2_3:11085502-11085521 None:intergenic 30.0%
!! AAATATACTTGTTGGTGCTA+TGG - chr2_3:11085501-11085520 Msa0278160:CDS 30.0%
TTGTATCAACTGAAAGTTCA+CGG - chr2_3:11085811-11085830 Msa0278160:five_prime_UTR 30.0%
AAATACAGGTAGAATGAAAG+AGG + chr2_3:11086091-11086110 None:intergenic 30.0%
! CAAGTTGAGATTATAGCCAA+TGG - chr2_3:11081425-11081444 Msa0278160:three_prime_UTR 35.0%
!! TCTGTTGCATTGATTTCCAA+TGG + chr2_3:11081802-11081821 None:intergenic 35.0%
CTCTGTTGTGTTTCATCTAA+GGG + chr2_3:11081889-11081908 None:intergenic 35.0%
ACTCTGTTGTGTTTCATCTA+AGG + chr2_3:11081890-11081909 None:intergenic 35.0%
TAGATGAAACACAACAGAGT+TGG - chr2_3:11081890-11081909 Msa0278160:CDS 35.0%
TTCTTCTTCTTCTGTTCTGT+TGG + chr2_3:11081925-11081944 None:intergenic 35.0%
! AAGATCTTTGTTTGGACTGT+TGG - chr2_3:11081982-11082001 Msa0278160:CDS 35.0%
GGATGTTTCTTATGATGTCT+AGG + chr2_3:11082066-11082085 None:intergenic 35.0%
AGAGTATAATTATCAGGAGG+AGG + chr2_3:11082087-11082106 None:intergenic 35.0%
! GCAAGAGTATAATTATCAGG+AGG + chr2_3:11082090-11082109 None:intergenic 35.0%
CTTGATTACTTGATCTGATC+TGG - chr2_3:11082461-11082480 Msa0278160:intron 35.0%
AGCATAACAATGTTTCTTGG+AGG - chr2_3:11082774-11082793 Msa0278160:intron 35.0%
GCATAACAATGTTTCTTGGA+GGG - chr2_3:11082775-11082794 Msa0278160:intron 35.0%
CATAACAATGTTTCTTGGAG+GGG - chr2_3:11082776-11082795 Msa0278160:intron 35.0%
TCATGTATGCAAGATGGAAA+GGG - chr2_3:11082803-11082822 Msa0278160:intron 35.0%
GTCAAGGAACTCATTAAATG+GGG - chr2_3:11082986-11083005 Msa0278160:CDS 35.0%
AAGACTTCCAGTAATCAACA+AGG + chr2_3:11083425-11083444 None:intergenic 35.0%
ACTGGAAGTCTTTATGATTG+TGG - chr2_3:11083433-11083452 Msa0278160:intron 35.0%
ATTGTAGAATGTTGAAGCCT+CGG + chr2_3:11083748-11083767 None:intergenic 35.0%
TCAACATTCTACAATTCCAC+CGG - chr2_3:11083753-11083772 Msa0278160:CDS 35.0%
AACAAACTCATCAAAGTAGC+CGG + chr2_3:11083775-11083794 None:intergenic 35.0%
! GCTACTTTGATGAGTTTGTT+TGG - chr2_3:11083775-11083794 Msa0278160:CDS 35.0%
! CTTAAGGTACGAGTTATTTC+CGG + chr2_3:11083826-11083845 None:intergenic 35.0%
CAGCTAAATACACCATAATC+AGG + chr2_3:11083900-11083919 None:intergenic 35.0%
CTGATTATGGTGTATTTAGC+TGG - chr2_3:11083898-11083917 Msa0278160:CDS 35.0%
AATTATTATCCGCTTGCAAG+GGG + chr2_3:11084417-11084436 None:intergenic 35.0%
CAAATTATTATCCGCTTGCA+AGG + chr2_3:11084419-11084438 None:intergenic 35.0%
! ATTGCTGATCGTAGCAATTT+TGG - chr2_3:11084456-11084475 Msa0278160:intron 35.0%
ATTTCTTCATATGGATACCC+AGG + chr2_3:11084559-11084578 None:intergenic 35.0%
TAAAGCTTGTGAAAACAGGT+AGG + chr2_3:11084627-11084646 None:intergenic 35.0%
CTGTTAAAGCTTGTGAAAAC+AGG + chr2_3:11084631-11084650 None:intergenic 35.0%
! ACAAGCTTTAACAGAACCAA+AGG - chr2_3:11084637-11084656 Msa0278160:CDS 35.0%
GGAGTAAGAATTGTTACCTT+TGG + chr2_3:11084656-11084675 None:intergenic 35.0%
!! TTACTCCAAAGCTTTTAGCT+TGG - chr2_3:11084669-11084688 Msa0278160:CDS 35.0%
CCTTGCATCAGAATAGAAAT+TGG + chr2_3:11084714-11084733 None:intergenic 35.0%
CCAATTTCTATTCTGATGCA+AGG - chr2_3:11084711-11084730 Msa0278160:CDS 35.0%
GGCTTGATTCAATTAAACCA+TGG - chr2_3:11084801-11084820 Msa0278160:intron 35.0%
CATCAAGGTAATCACTGTAT+AGG + chr2_3:11084875-11084894 None:intergenic 35.0%
! AGCTAGCTCTTCTTTACATT+GGG - chr2_3:11085012-11085031 Msa0278160:intron 35.0%
TTCTTTACATTGGGTCTGTT+TGG - chr2_3:11085021-11085040 Msa0278160:intron 35.0%
TAAGTACTTGTGAGACTGTT+TGG - chr2_3:11085073-11085092 Msa0278160:intron 35.0%
AAGTACTTGTGAGACTGTTT+GGG - chr2_3:11085074-11085093 Msa0278160:intron 35.0%
TTTCAATTATGGCCATGTGT+GGG + chr2_3:11085259-11085278 None:intergenic 35.0%
ATTTCAATTATGGCCATGTG+TGG + chr2_3:11085260-11085279 None:intergenic 35.0%
ATTGAAATCACTATGACGTC+TGG - chr2_3:11085272-11085291 Msa0278160:intron 35.0%
TTGAAATCACTATGACGTCT+GGG - chr2_3:11085273-11085292 Msa0278160:intron 35.0%
TTGCAGATTGATTACATCCT+TGG - chr2_3:11085328-11085347 Msa0278160:intron 35.0%
! ACAACATAACTCATTTTCCG+TGG + chr2_3:11085361-11085380 None:intergenic 35.0%
CGGAAAATGAGTTATGTTGT+TGG - chr2_3:11085361-11085380 Msa0278160:intron 35.0%
AGTATAACTGTAAAGGTGGA+TGG - chr2_3:11085449-11085468 Msa0278160:CDS 35.0%
!! TGTAGTTTGTTCGAACATCA+TGG + chr2_3:11085555-11085574 None:intergenic 35.0%
AACTAATGCTGCTACTAAAC+CGG + chr2_3:11085608-11085627 None:intergenic 35.0%
!! CACGGAAAATTTTGAAGACA+AGG - chr2_3:11085829-11085848 Msa0278160:five_prime_UTR 35.0%
ATAAGTCCATTTGTGCTTGC+TGG + chr2_3:11081552-11081571 None:intergenic 40.0%
! AACTTGTTCATCTTTGTCGG+TGG - chr2_3:11081733-11081752 Msa0278160:three_prime_UTR 40.0%
CTGCTCTATCTAACTCGTTT+AGG + chr2_3:11081855-11081874 None:intergenic 40.0%
! ACACAACAGAGTTGGTTGTT+AGG - chr2_3:11081898-11081917 Msa0278160:CDS 40.0%
CAGTCCAAACAAAGATCTTG+CGG + chr2_3:11081981-11082000 None:intergenic 40.0%
!!! TTGTTTGCTGCTTTTGTTGC+TGG - chr2_3:11082012-11082031 Msa0278160:CDS 40.0%
GGAAACTCATGTATGCAAGA+TGG - chr2_3:11082797-11082816 Msa0278160:intron 40.0%
CTCATGTATGCAAGATGGAA+AGG - chr2_3:11082802-11082821 Msa0278160:intron 40.0%
! TTGGTGGGTATTATGATGCT+GGG - chr2_3:11082858-11082877 Msa0278160:intron 40.0%
!! ATGGTGATGGAAAAAGCTTG+AGG + chr2_3:11082905-11082924 None:intergenic 40.0%
TTTCCATCACCATGTTGAGT+TGG - chr2_3:11082912-11082931 Msa0278160:CDS 40.0%
AATGACACTCCAACTCAACA+TGG + chr2_3:11082924-11082943 None:intergenic 40.0%
AGTGGTAAATACGAAGCTAC+TGG - chr2_3:11082950-11082969 Msa0278160:CDS 40.0%
GTGGTAAATACGAAGCTACT+GGG - chr2_3:11082951-11082970 Msa0278160:CDS 40.0%
TGGTAAATACGAAGCTACTG+GGG - chr2_3:11082952-11082971 Msa0278160:CDS 40.0%
ATCAAGAGTTGAAGGCAAGA+AGG + chr2_3:11083084-11083103 None:intergenic 40.0%
CTTGCCTTCAACTCTTGATT+TGG - chr2_3:11083085-11083104 Msa0278160:intron 40.0%
CTAAACCATCTCTTTCTACG+CGG + chr2_3:11083394-11083413 None:intergenic 40.0%
GATTGTGGATCTCATGTGTT+TGG - chr2_3:11083448-11083467 Msa0278160:intron 40.0%
ATCCAGCAGTAGTGATCATT+AGG + chr2_3:11083523-11083542 None:intergenic 40.0%
! TGGTAACTTGAAGAGTGTAG+TGG + chr2_3:11083692-11083711 None:intergenic 40.0%
! ACTACACTCTTCAAGTTACC+AGG - chr2_3:11083691-11083710 Msa0278160:CDS 40.0%
! CTACACTCTTCAAGTTACCA+GGG - chr2_3:11083692-11083711 Msa0278160:CDS 40.0%
! TTTGATGAGTTTGTTTGGGG+AGG - chr2_3:11083780-11083799 Msa0278160:CDS 40.0%
AGTGCAAATACTGTCCAAGA+AGG + chr2_3:11084266-11084285 None:intergenic 40.0%
! GTTCTGCTATGCCTTTTTCT+TGG - chr2_3:11084297-11084316 Msa0278160:intron 40.0%
TACAGGAGATGGAATACTGA+AGG + chr2_3:11084377-11084396 None:intergenic 40.0%
ATATACGCAAGGGGATATAC+AGG + chr2_3:11084394-11084413 None:intergenic 40.0%
! GCATTGACAACATATTGGAG+AGG + chr2_3:11084837-11084856 None:intergenic 40.0%
! AGGCTGCATTGACAACATAT+TGG + chr2_3:11084842-11084861 None:intergenic 40.0%
! TGTTGTCAATGCAGCCTTTT+TGG - chr2_3:11084845-11084864 Msa0278160:intron 40.0%
ACTGTATAGGGTAGCCAAAA+AGG + chr2_3:11084862-11084881 None:intergenic 40.0%
TGCTTTAGTCGAGTTATACG+TGG - chr2_3:11084988-11085007 Msa0278160:intron 40.0%
GCTTTAGTCGAGTTATACGT+GGG - chr2_3:11084989-11085008 Msa0278160:intron 40.0%
! GAGCTAGCTCTTCTTTACAT+TGG - chr2_3:11085011-11085030 Msa0278160:intron 40.0%
! TCTGTTTGGATCGACTTAGT+TGG - chr2_3:11085035-11085054 Msa0278160:intron 40.0%
! CTGTTTGGATCGACTTAGTT+GGG - chr2_3:11085036-11085055 Msa0278160:intron 40.0%
AGACTGTTTGGGAGAGATTA+TGG - chr2_3:11085085-11085104 Msa0278160:intron 40.0%
TTCAGTTGTTAACCCACACA+TGG - chr2_3:11085244-11085263 Msa0278160:intron 40.0%
ACATCCTTGGTAAGAATCCA+CGG - chr2_3:11085341-11085360 Msa0278160:intron 40.0%
! TTTTCCGTGGATTCTTACCA+AGG + chr2_3:11085348-11085367 None:intergenic 40.0%
CTTGTTCTTTGGTATAGACG+CGG + chr2_3:11085425-11085444 None:intergenic 40.0%
ACTGTAAAGGTGGATGGAAA+TGG - chr2_3:11085455-11085474 Msa0278160:CDS 40.0%
TAAAGGTGGATGGAAATGGA+GGG - chr2_3:11085459-11085478 Msa0278160:CDS 40.0%
ATGACACCTTATGGTTTCCA+TGG + chr2_3:11085724-11085743 None:intergenic 40.0%
CACAACCAACTAGATTCACT+AGG + chr2_3:11085868-11085887 None:intergenic 40.0%
CTAGTGAATCTAGTTGGTTG+TGG - chr2_3:11085866-11085885 Msa0278160:five_prime_UTR 40.0%
ATCTAGTTGGTTGTGGCTAA+TGG - chr2_3:11085873-11085892 Msa0278160:five_prime_UTR 40.0%
CAACAGATGAAGATCGTAGC+AGG - chr2_3:11081827-11081846 Msa0278160:CDS 45.0%
TCAGCCGCAAGATCTTTGTT+TGG - chr2_3:11081974-11081993 Msa0278160:CDS 45.0%
ATGCAAGATGGAAAGGGTGA+TGG - chr2_3:11082809-11082828 Msa0278160:intron 45.0%
TGGTGTATCTGCTGCAATCA+AGG - chr2_3:11082829-11082848 Msa0278160:intron 45.0%
ATCTGCTGCAATCAAGGATC+TGG - chr2_3:11082835-11082854 Msa0278160:intron 45.0%
CAATCAAGGATCTGGTTGGT+GGG - chr2_3:11082843-11082862 Msa0278160:intron 45.0%
! GTTGGTGGGTATTATGATGC+TGG - chr2_3:11082857-11082876 Msa0278160:intron 45.0%
! TGGTGGGTATTATGATGCTG+GGG - chr2_3:11082859-11082878 Msa0278160:intron 45.0%
ACTCCAACTCAACATGGTGA+TGG + chr2_3:11082918-11082937 None:intergenic 45.0%
! TGGAGTGTCATTGAGTACAG+TGG - chr2_3:11082932-11082951 Msa0278160:CDS 45.0%
TGGGGAGCTTAATCATGTCA+AGG - chr2_3:11082970-11082989 Msa0278160:CDS 45.0%
GAGTTGAAGGCAAGAAGGTT+TGG + chr2_3:11083079-11083098 None:intergenic 45.0%
GTTCTTTGTGTTCGGCTTTG+TGG - chr2_3:11083304-11083323 Msa0278160:intron 45.0%
TGATACCGCGTAGAAAGAGA+TGG - chr2_3:11083386-11083405 Msa0278160:intron 45.0%
!! TGTGTTTGGTGTTCTTCGAC+AGG - chr2_3:11083462-11083481 Msa0278160:intron 45.0%
!! TTTGGTGTTCTTCGACAGGT+TGG - chr2_3:11083466-11083485 Msa0278160:intron 45.0%
! TTGGTGTTCTTCGACAGGTT+GGG - chr2_3:11083467-11083486 Msa0278160:intron 45.0%
CTCCTAATGATCACTACTGC+TGG - chr2_3:11083518-11083537 Msa0278160:intron 45.0%
TGTCGTAGTCAATGTCCTCT+GGG + chr2_3:11083549-11083568 None:intergenic 45.0%
ACAACTGTGGCATTCAGTGA+CGG + chr2_3:11083575-11083594 None:intergenic 45.0%
CACTGAATGCCACAGTTGTT+CGG - chr2_3:11083576-11083595 Msa0278160:intron 45.0%
CAGAGAGGTAGATACAGTAC+AGG - chr2_3:11083717-11083736 Msa0278160:CDS 45.0%
ATACAGTACAGGTAAGTCCG+AGG - chr2_3:11083728-11083747 Msa0278160:CDS 45.0%
AAACTCATCAAAGTAGCCGG+TGG + chr2_3:11083772-11083791 None:intergenic 45.0%
TAAGCATGCTGGTGCTTTCT+GGG - chr2_3:11083869-11083888 Msa0278160:CDS 45.0%
TGTCCAAGAAGGCAAGAACT+AGG + chr2_3:11084255-11084274 None:intergenic 45.0%
TTGCAAGGGGATATACGCAA+GGG + chr2_3:11084404-11084423 None:intergenic 45.0%
AGGTTCTTCTTAGTCGTCTG+AGG - chr2_3:11084521-11084540 Msa0278160:CDS 45.0%
TGAGGTTGTTCTTGAGTCCT+GGG - chr2_3:11084539-11084558 Msa0278160:CDS 45.0%
! TATGCTGGTCTGATTGTGGA+AGG + chr2_3:11084590-11084609 None:intergenic 45.0%
! TGACTATGCTGGTCTGATTG+TGG + chr2_3:11084594-11084613 None:intergenic 45.0%
GCTTGTGAAAACAGGTAGGT+AGG + chr2_3:11084623-11084642 None:intergenic 45.0%
! TGGTGCCAAGCTAAAAGCTT+TGG + chr2_3:11084677-11084696 None:intergenic 45.0%
ACAACATATTGGAGAGGCTG+AGG + chr2_3:11084831-11084850 None:intergenic 45.0%
TTAGGTCCACAATACCATCC+AGG + chr2_3:11084909-11084928 None:intergenic 45.0%
!!! GCTCTATGGTGGACATGTTT+TGG + chr2_3:11085403-11085422 None:intergenic 45.0%
CGCGTCTATACCAAAGAACA+AGG - chr2_3:11085423-11085442 Msa0278160:CDS 45.0%
GTAAAGGTGGATGGAAATGG+AGG - chr2_3:11085458-11085477 Msa0278160:CDS 45.0%
GCAGCATTAGTTGCATTGTC+AGG - chr2_3:11085616-11085635 Msa0278160:CDS 45.0%
TGGTGGAACAGCAGAGAAAA+GGG + chr2_3:11085671-11085690 None:intergenic 45.0%
TTGGTGGAACAGCAGAGAAA+AGG + chr2_3:11085672-11085691 None:intergenic 45.0%
ACAAGCAGCATGACACCTTA+TGG + chr2_3:11085733-11085752 None:intergenic 45.0%
CTTGGCCTAGTGAATCTAGT+TGG - chr2_3:11085860-11085879 Msa0278160:five_prime_UTR 45.0%
!!! TATTTTATTATTTTCATTTT+TGG + chr2_3:11081470-11081489 None:intergenic 5.0%
!! ATAATAAAATAAAGAAAATA+AGG - chr2_3:11081479-11081498 Msa0278160:three_prime_UTR 5.0%
!!! TTTTTTTTTTTTTTTACTAA+AGG - chr2_3:11082644-11082663 Msa0278160:CDS 5.0%
AACCAGCCAGCAAGCACAAA+TGG - chr2_3:11081543-11081562 Msa0278160:three_prime_UTR 50.0%
CATGTACGGACGTGATCCAT+GGG - chr2_3:11081771-11081790 Msa0278160:three_prime_UTR 50.0%
ATGTACGGACGTGATCCATG+GGG - chr2_3:11081772-11081791 Msa0278160:three_prime_UTR 50.0%
ATTTCCAATGGTCCTCCCCA+TGG + chr2_3:11081790-11081809 None:intergenic 50.0%
TGTTTGTGGGTTTGTGCAGC+TGG - chr2_3:11082740-11082759 Msa0278160:intron 50.0%
GCTGCAATCAAGGATCTGGT+TGG - chr2_3:11082839-11082858 Msa0278160:intron 50.0%
GCAATCAAGGATCTGGTTGG+TGG - chr2_3:11082842-11082861 Msa0278160:intron 50.0%
GTTTGGTACCTGTGCAGCAA+GGG + chr2_3:11083062-11083081 None:intergenic 50.0%
! TCGGCTTTGTGGTTCTCATC+TGG - chr2_3:11083315-11083334 Msa0278160:intron 50.0%
! CGGCTTTGTGGTTCTCATCT+GGG - chr2_3:11083316-11083335 Msa0278160:intron 50.0%
TTGTGGTTCTCATCTGGGTG+TGG - chr2_3:11083321-11083340 Msa0278160:intron 50.0%
TGTGGTTCTCATCTGGGTGT+GGG - chr2_3:11083322-11083341 Msa0278160:intron 50.0%
CTGTCGTAGTCAATGTCCTC+TGG + chr2_3:11083550-11083569 None:intergenic 50.0%
! CAGAGGACATTGACTACGAC+AGG - chr2_3:11083548-11083567 Msa0278160:intron 50.0%
CAACTGTGGCATTCAGTGAC+GGG + chr2_3:11083574-11083593 None:intergenic 50.0%
CAGCAAGATCCGAACAACTG+TGG + chr2_3:11083588-11083607 None:intergenic 50.0%
CAGTTGTTCGGATCTTGCTG+CGG - chr2_3:11083588-11083607 Msa0278160:CDS 50.0%
AACAATGGATGCAGCAGCCA+AGG + chr2_3:11083626-11083645 None:intergenic 50.0%
CAAGTTACCAGGGATCAGAG+AGG - chr2_3:11083702-11083721 Msa0278160:CDS 50.0%
GTATCTACCTCTCTGATCCC+TGG + chr2_3:11083712-11083731 None:intergenic 50.0%
GCCTGGATGTACTTTGCAAC+CGG - chr2_3:11083804-11083823 Msa0278160:CDS 50.0%
TCCGGTTGCAAAGTACATCC+AGG + chr2_3:11083808-11083827 None:intergenic 50.0%
CAGGAGTAGTGGCAAGCTTA+AGG + chr2_3:11083842-11083861 None:intergenic 50.0%
CTTAAGCTTGCCACTACTCC+TGG - chr2_3:11083840-11083859 Msa0278160:CDS 50.0%
CTTAGCAATGCCAGGAGTAG+TGG + chr2_3:11083853-11083872 None:intergenic 50.0%
CTAAGCATGCTGGTGCTTTC+TGG - chr2_3:11083868-11083887 Msa0278160:CDS 50.0%
AAGCATGCTGGTGCTTTCTG+GGG - chr2_3:11083870-11083889 Msa0278160:CDS 50.0%
AGCTGGGATAACAAGCTTGC+TGG - chr2_3:11083915-11083934 Msa0278160:CDS 50.0%
!! TAACAAGCTTGCTGGTGCTC+AGG - chr2_3:11083923-11083942 Msa0278160:CDS 50.0%
GCAAGGGGATATACAGGAGA+TGG + chr2_3:11084388-11084407 None:intergenic 50.0%
TGCAAGGGGATATACGCAAG+GGG + chr2_3:11084403-11084422 None:intergenic 50.0%
CTTGCAAGGGGATATACGCA+AGG + chr2_3:11084405-11084424 None:intergenic 50.0%
TGCGTATATCCCCTTGCAAG+CGG - chr2_3:11084405-11084424 Msa0278160:intron 50.0%
CTGAGGTTGTTCTTGAGTCC+TGG - chr2_3:11084538-11084557 Msa0278160:CDS 50.0%
! GTAGGAGCACATGACTATGC+TGG + chr2_3:11084605-11084624 None:intergenic 50.0%
GATACGCCTGGATGGTATTG+TGG - chr2_3:11084900-11084919 Msa0278160:intron 50.0%
TTGGTATAGACGCGGCTCTA+TGG + chr2_3:11085417-11085436 None:intergenic 50.0%
!! CTTGTTGGTGCTATGGTTGC+TGG - chr2_3:11085508-11085527 Msa0278160:CDS 50.0%
TACACAGAGCCAACACTTGC+TGG - chr2_3:11085577-11085596 Msa0278160:CDS 50.0%
! CCAACACTTGCTGGAAATGC+CGG - chr2_3:11085586-11085605 Msa0278160:CDS 50.0%
! GGTGGTGTTGGAAACATTGG+TGG + chr2_3:11085688-11085707 None:intergenic 50.0%
! GGTGGTGGTGTTGGAAACAT+TGG + chr2_3:11085691-11085710 None:intergenic 50.0%
! TATGGTTTCCATGGTGCTGG+AGG + chr2_3:11085715-11085734 None:intergenic 50.0%
CCTTATGGTTTCCATGGTGC+TGG + chr2_3:11085718-11085737 None:intergenic 50.0%
CCAGCACCATGGAAACCATA+AGG - chr2_3:11085715-11085734 Msa0278160:CDS 50.0%
AAGTCACTCGTGGTACTTGC+TGG + chr2_3:11085766-11085785 None:intergenic 50.0%
CAATGCACTCAAGTCACTCG+TGG + chr2_3:11085776-11085795 None:intergenic 50.0%
CACGAGTGACTTGAGTGCAT+TGG - chr2_3:11085774-11085793 Msa0278160:five_prime_UTR 50.0%
GAAGACAAGGCGATGAAGCT+TGG - chr2_3:11085842-11085861 Msa0278160:five_prime_UTR 50.0%
! GTCCATTTGTGCTTGCTGGC+TGG + chr2_3:11081548-11081567 None:intergenic 55.0%
GCATGTACGGACGTGATCCA+TGG - chr2_3:11081770-11081789 Msa0278160:three_prime_UTR 55.0%
TGATCCATGGGGAGGACCAT+TGG - chr2_3:11081783-11081802 Msa0278160:exon 55.0%
CTGTGCAGCAAGGGTGGTAA+TGG + chr2_3:11083053-11083072 None:intergenic 55.0%
CATTACCACCCTTGCTGCAC+AGG - chr2_3:11083051-11083070 Msa0278160:intron 55.0%
! GGTTTGGTACCTGTGCAGCA+AGG + chr2_3:11083063-11083082 None:intergenic 55.0%
! GTTCTTCGACAGGTTGGGAG+TGG - chr2_3:11083472-11083491 Msa0278160:intron 55.0%
GGTTGGGAGTGGAGATACCT+CGG - chr2_3:11083483-11083502 Msa0278160:intron 55.0%
GTTGGGAGTGGAGATACCTC+GGG - chr2_3:11083484-11083503 Msa0278160:intron 55.0%
CCAGCATGCTTAGCAATGCC+AGG + chr2_3:11083861-11083880 None:intergenic 55.0%
CCTGGCATTGCTAAGCATGC+TGG - chr2_3:11083858-11083877 Msa0278160:CDS 55.0%
AGCATGCTGGTGCTTTCTGG+GGG - chr2_3:11083871-11083890 Msa0278160:CDS 55.0%
! GCGCCTAGTTCTTGCCTTCT+TGG - chr2_3:11084249-11084268 Msa0278160:intron 55.0%
CAGGCGTATCAGCAGCATCA+AGG + chr2_3:11084890-11084909 None:intergenic 55.0%
CTTGATGCTGCTGATACGCC+TGG - chr2_3:11084888-11084907 Msa0278160:intron 55.0%
ATGCTGCTGATACGCCTGGA+TGG - chr2_3:11084892-11084911 Msa0278160:intron 55.0%
AGAAACTCCGCGAGTTTGCC+AGG - chr2_3:11084943-11084962 Msa0278160:intron 55.0%
CATGTCACGTACCTGTGTCC+TGG + chr2_3:11084964-11084983 None:intergenic 55.0%
GTATAGACGCGGCTCTATGG+TGG + chr2_3:11085414-11085433 None:intergenic 55.0%
CTATGGTTGCTGGTCCTGAC+AGG - chr2_3:11085518-11085537 Msa0278160:CDS 55.0%
TGGAAACCATCGTGCCTGTC+AGG + chr2_3:11085535-11085554 None:intergenic 55.0%
CCGGCATTTCCAGCAAGTGT+TGG + chr2_3:11085589-11085608 None:intergenic 55.0%
TACGGACGTGATCCATGGGG+AGG - chr2_3:11081775-11081794 Msa0278160:three_prime_UTR 60.0%
TGGTACCTGTGCAGCAAGGG+TGG + chr2_3:11083059-11083078 None:intergenic 60.0%
AGGAGTCGTACTACCACCCG+AGG + chr2_3:11083503-11083522 None:intergenic 60.0%
TGCGGAAATGTCCGCTGCCT+TGG - chr2_3:11083606-11083625 Msa0278160:CDS 60.0%
!! AGTTTGTTTGGGGAGGCGCC+TGG - chr2_3:11083787-11083806 Msa0278160:CDS 60.0%
GCATGCTGGTGCTTTCTGGG+GGG - chr2_3:11083872-11083891 Msa0278160:CDS 60.0%
! CATGCTGGTGCTTTCTGGGG+GGG - chr2_3:11083873-11083892 Msa0278160:CDS 60.0%
! TTCTGGGGGGGCCCTGATTA+TGG - chr2_3:11083885-11083904 Msa0278160:CDS 60.0%
CCTGTGTCCTGGCAAACTCG+CGG + chr2_3:11084953-11084972 None:intergenic 60.0%
! TTCCATGGTGCTGGAGGTGG+TGG + chr2_3:11085709-11085728 None:intergenic 60.0%
! GGTTTCCATGGTGCTGGAGG+TGG + chr2_3:11085712-11085731 None:intergenic 60.0%
GGGAGTGGAGATACCTCGGG+TGG - chr2_3:11083487-11083506 Msa0278160:intron 65.0%
CTACTGCTGGATGCGCCCAG+AGG - chr2_3:11083531-11083550 Msa0278160:intron 65.0%
GGATGCAGCAGCCAAGGCAG+CGG + chr2_3:11083620-11083639 None:intergenic 65.0%
GGAGAGGCTGAGGCCTACCA+TGG + chr2_3:11084821-11084840 None:intergenic 65.0%
CCGCGAGTTTGCCAGGACAC+AGG - chr2_3:11084950-11084969 Msa0278160:intron 65.0%
GCTGGTCCTGACAGGCACGA+TGG - chr2_3:11085526-11085545 Msa0278160:CDS 65.0%
!! GCTGGAGGTGGTGGTGGTGT+TGG + chr2_3:11085700-11085719 None:intergenic 65.0%
! CATGGTGCTGGAGGTGGTGG+TGG + chr2_3:11085706-11085725 None:intergenic 65.0%
CACCACCACCTCCAGCACCA+TGG - chr2_3:11085704-11085723 Msa0278160:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 11081411 11086120 11081411 ID=Msa0278160;Name=Msa0278160
chr2_3 mRNA 11081411 11086120 11081411 ID=Msa0278160-mRNA-1;Parent=Msa0278160;Name=Msa0278160-mRNA-1;_AED=0.04;_eAED=0.04;_QI=355|0.66|0.85|0.85|0.66|0.71|7|385|626
chr2_3 exon 11081411 11082197 11081411 ID=Msa0278160-mRNA-1:exon:4883;Parent=Msa0278160-mRNA-1
chr2_3 exon 11082560 11082732 11082560 ID=Msa0278160-mRNA-1:exon:4882;Parent=Msa0278160-mRNA-1
chr2_3 exon 11082873 11083008 11082873 ID=Msa0278160-mRNA-1:exon:4881;Parent=Msa0278160-mRNA-1
chr2_3 exon 11083138 11083150 11083138 ID=Msa0278160-mRNA-1:exon:4880;Parent=Msa0278160-mRNA-1
chr2_3 exon 11083587 11084047 11083587 ID=Msa0278160-mRNA-1:exon:4879;Parent=Msa0278160-mRNA-1
chr2_3 exon 11084459 11084772 11084459 ID=Msa0278160-mRNA-1:exon:4878;Parent=Msa0278160-mRNA-1
chr2_3 exon 11085384 11086120 11085384 ID=Msa0278160-mRNA-1:exon:4877;Parent=Msa0278160-mRNA-1
chr2_3 five_prime_UTR 11085766 11086120 11085766 ID=Msa0278160-mRNA-1:five_prime_utr;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11085384 11085765 11085384 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11084459 11084772 11084459 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11083587 11084047 11083587 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11083138 11083150 11083138 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11082873 11083008 11082873 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11082560 11082732 11082560 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 CDS 11081796 11082197 11081796 ID=Msa0278160-mRNA-1:cds;Parent=Msa0278160-mRNA-1
chr2_3 three_prime_UTR 11081411 11081795 11081411 ID=Msa0278160-mRNA-1:three_prime_utr;Parent=Msa0278160-mRNA-1
Gene Sequence

>Msa0278160

ATGAGCATGTACGGACGTGATCCATGGGGAGGACCATTGGAAATCAATGCAACAGATTCAGCAACAGATGAAGATCGTAGCAGGAACCTAAACGAGTTAGATAGAGCAGCTTTATCAAGACCCTTAGATGAAACACAACAGAGTTGGTTGTTAGGTCCAACAGAACAGAAGAAGAAGAAGAAATATGTAGATCTGGGTTGTATCATTGTCAGCCGCAAGATCTTTGTTTGGACTGTTGGAACAATATTGTTTGCTGCTTTTGTTGCTGGTTTTGTTACTTTGATTGTTAAAACTGTTCCTAGACATCATAAGAAACATCCTCCTCCTGATAATTATACTCTTGCTCTTCATAAAGCTCTTATGTTCTTCAATGCCCAAAAATCTGGAAAACTTCCTAAGCATAACAATGTTTCTTGGAGGGGAAACTCATGTATGCAAGATGGAAAGGGTGATGGTGTATCTGCTGCAATCAAGGATCTGGTTGGTGGGTATTATGATGCTGGGGATGCCATCAAATTCAATTTTCCTCAAGCTTTTTCCATCACCATGTTGAGTTGGAGTGTCATTGAGTACAGTGGTAAATACGAAGCTACTGGGGAGCTTAATCATGTCAAGGAACTCATTAAATGGGGCACTGATTATTTTCTCAAGACATTCAATAGTACTGCTGATACCATTACCACCCTTGCTGCACAGGTTGGGAGTGGAGATACCTCGGGTGGTAGTACGACTCCTAATGATCACTACTGCTGGATGCGCCCAGAGGACATTGACTACGACAGGCCCGTCACTGAATGCCACAGTTGTTCGGATCTTGCTGCGGAAATGTCCGCTGCCTTGGCTGCTGCATCCATTGTTTTCAAAGACAACAAAGCCTATTCAAAGAAACTTGTTCATGGTGCCACTACACTCTTCAAGTTACCAGGGATCAGAGAGGTAGATACAGTACAGGTAAGTCCGAGGCTTCAACATTCTACAATTCCACCGGCTACTTTGATGAGTTTGTTTGGGGAGGCGCCTGGATGTACTTTGCAACCGGAAATAACTCGTACCTTAAGCTTGCCACTACTCCTGGCATTGCTAAGCATGCTGGTGCTTTCTGGGGGGGCCCTGATTATGGTGTATTTAGCTGGGATAACAAGCTTGCTGGTGCTCAGTATTCCATCTCCTGTTCTTCTTAGTCGTCTGAGGTTGTTCTTGAGTCCTGGGTATCCATATGAAGAAATTCTAAGGACCTTCCACAATCAGACCAGCATAGTCATGTGCTCCTACCTACCTGTTTTCACAAGCTTTAACAGAACCAAAGGAGGCTTGATTCAATTAAACCATGGTAGGCCTCAGCCTCTCCAATATGTTGTCAATGCAGCCTTTTTGGCTACCCTATACAGTGATTACCTTGATGCTGCTGATACGCCTGGATGGTATTGTGGACCTAACTTCTTTTCAACTGAGAAACTCCGCGAGTTTGCCAGGACACAGATTGATTACATCCTTGGTAAGAATCCACGGAAAATGAGTTATGTTGTTGGTTTTGGTAATCATTATCCAAAACATGTCCACCATAGAGCCGCGTCTATACCAAAGAACAAGGTTAAGTATAACTGTAAAGGTGGATGGAAATGGAGGGAATCATCAAAGCCAAATCCAAATATACTTGTTGGTGCTATGGTTGCTGGTCCTGACAGGCACGATGGTTTCCATGATGTTCGAACAAACTACAACTACACAGAGCCAACACTTGCTGGAAATGCCGGTTTAGTAGCAGCATTAGTTGCATTGTCAGGTGACAAAAGTATACCAATTGATAAAAATACCCTTTTCTCTGCTGTTCCACCAATGTTTCCAACACCACCACCACCTCCAGCACCATGGAAACCATAA
Protein sequence

>Msa0278160

MSMYGRDPWGGPLEINATDSATDEDRSRNLNELDRAALSRPLDETQQSWLLGPTEQKKKKKYVDLGCIIVSRKIFVWTVGTILFAAFVAGFVTLIVKTVPRHHKKHPPPDNYTLALHKALMFFNAQKSGKLPKHNNVSWRGNSCMQDGKGDGVSAAIKDLVGGYYDAGDAIKFNFPQAFSITMLSWSVIEYSGKYEATGELNHVKELIKWGTDYFLKTFNSTADTITTLAAQVGSGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECHSCSDLAAEMSAALAAASIVFKDNKAYSKKLVHGATTLFKLPGIREVDTVQVSPRLQHSTIPPATLMSLFGEAPGCTLQPEITRTLSLPLLLALLSMLVLSGGALIMVYLAGITSLLVLSIPSPVLLSRLRLFLSPGYPYEEILRTFHNQTSIVMCSYLPVFTSFNRTKGGLIQLNHGRPQPLQYVVNAAFLATLYSDYLDAADTPGWYCGPNFFSTEKLREFARTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNILVGAMVAGPDRHDGFHDVRTNYNYTEPTLAGNAGLVAALVALSGDKSIPIDKNTLFSAVPPMFPTPPPPPAPWKP*