Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524950 | XP_003603419.1 | 98.436 | 1087 | 0 | 1 | 1 | 1070 | 1 | 1087 | 0.0 | 2217 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524950 | sp|O48946|CESA1_ARATH | 82.613 | 1087 | 163 | 7 | 1 | 1068 | 1 | 1080 | 0.0 | 1824 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524950 | G7JB42 | 98.436 | 1087 | 0 | 1 | 1 | 1070 | 1 | 1087 | 0.0 | 2217 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0170130 | Msa0524950 | 0.813448 | 2.546678e-51 | -8.615850e-47 |
Msa0198210 | Msa0524950 | 0.871242 | 7.933887e-67 | -8.615850e-47 |
Msa0374190 | Msa0524950 | 0.869988 | 2.049458e-66 | -8.615850e-47 |
Msa0382630 | Msa0524950 | 0.964245 | 4.380572e-123 | -8.615850e-47 |
Msa0382690 | Msa0524950 | 0.895358 | 1.033994e-75 | -8.615850e-47 |
Msa0400420 | Msa0524950 | 0.818639 | 1.764438e-52 | -8.615850e-47 |
Msa0423460 | Msa0524950 | 0.821687 | 3.535962e-53 | -8.615850e-47 |
Msa0447440 | Msa0524950 | 0.891332 | 4.377449e-74 | -8.615850e-47 |
Msa0469610 | Msa0524950 | 0.852261 | 5.185479e-61 | -8.615850e-47 |
Msa0480420 | Msa0524950 | 0.996962 | 8.898602e-235 | -8.615850e-47 |
Msa0242820 | Msa0524950 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
Msa0278160 | Msa0524950 | 0.827502 | 1.509894e-54 | -8.615850e-47 |
Msa0287640 | Msa0524950 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
Msa0287660 | Msa0524950 | 0.810685 | 1.019507e-50 | -8.615850e-47 |
Msa0353500 | Msa0524950 | 0.894065 | 3.501212e-75 | -8.615850e-47 |
Msa0494950 | Msa0524950 | 0.870119 | 1.856965e-66 | -8.615850e-47 |
Msa0515310 | Msa0524950 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
Msa0524840 | Msa0524950 | 0.995738 | 2.303867e-219 | -8.615850e-47 |
Msa0524950 | Msa0568760 | 0.889745 | 1.839992e-73 | -8.615850e-47 |
Msa0524950 | Msa0619010 | 0.911639 | 4.842264e-83 | -8.615850e-47 |
Msa0524950 | Msa0627580 | 0.800555 | 1.364272e-48 | -8.615850e-47 |
Msa0524950 | Msa0659080 | 0.880760 | 4.210184e-70 | -8.615850e-47 |
Msa0524950 | Msa0705570 | 0.914864 | 1.160598e-84 | -8.615850e-47 |
Msa0524950 | Msa1088150 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
Msa0524950 | Msa1175380 | 0.807385 | 5.187253e-50 | -8.615850e-47 |
Msa0524950 | Msa1235470 | 0.828306 | 9.675223e-55 | -8.615850e-47 |
Msa0524950 | Msa1315760 | 0.819929 | 8.970667e-53 | -8.615850e-47 |
Msa0524950 | Msa1466140 | 0.816114 | 6.533141e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524950 | MtrunA17_Chr3g0137951 | 98.436 | 1087 | 0 | 1 | 1 | 1070 | 1 | 1087 | 0.0 | 2217 |
Msa0524950 | MtrunA17_Chr3g0088821 | 66.636 | 1085 | 311 | 11 | 25 | 1070 | 6 | 1078 | 0.0 | 1471 |
Msa0524950 | MtrunA17_Chr8g0352231 | 67.253 | 1081 | 311 | 10 | 25 | 1070 | 6 | 1078 | 0.0 | 1444 |
Msa0524950 | MtrunA17_Chr8g0383701 | 61.671 | 1101 | 385 | 11 | 1 | 1070 | 1 | 1095 | 0.0 | 1375 |
Msa0524950 | MtrunA17_Chr4g0073711 | 63.263 | 1097 | 317 | 16 | 1 | 1070 | 1 | 1038 | 0.0 | 1369 |
Msa0524950 | MtrunA17_Chr1g0201731 | 61.116 | 1111 | 372 | 12 | 1 | 1070 | 5 | 1096 | 0.0 | 1368 |
Msa0524950 | MtrunA17_Chr2g0296991 | 59.946 | 1111 | 327 | 17 | 5 | 1070 | 7 | 1044 | 0.0 | 1328 |
Msa0524950 | MtrunA17_Chr7g0267731 | 61.426 | 1024 | 320 | 10 | 66 | 1070 | 19 | 986 | 0.0 | 1245 |
Msa0524950 | MtrunA17_Chr2g0284211 | 60.019 | 1053 | 317 | 15 | 40 | 1070 | 9 | 979 | 0.0 | 1244 |
Msa0524950 | MtrunA17_Chr3g0078671 | 56.986 | 1095 | 400 | 12 | 1 | 1070 | 1 | 1049 | 0.0 | 1224 |
Msa0524950 | MtrunA17_Chr8g0379241 | 68.616 | 838 | 227 | 9 | 254 | 1070 | 169 | 991 | 0.0 | 1203 |
Msa0524950 | MtrunA17_Chr8g0379241 | 46.296 | 54 | 29 | 0 | 37 | 90 | 6 | 59 | 7.81e-12 | 69.7 |
Msa0524950 | MtrunA17_Chr8g0364641 | 53.346 | 1091 | 378 | 15 | 1 | 1070 | 1 | 981 | 0.0 | 1158 |
Msa0524950 | MtrunA17_Chr1g0183381 | 64.354 | 836 | 252 | 9 | 254 | 1070 | 96 | 904 | 0.0 | 1130 |
Msa0524950 | MtrunA17_Chr4g0039801 | 45.949 | 938 | 376 | 19 | 217 | 1052 | 220 | 1128 | 0.0 | 792 |
Msa0524950 | MtrunA17_Chr5g0410641 | 45.379 | 963 | 375 | 21 | 201 | 1067 | 208 | 1115 | 0.0 | 785 |
Msa0524950 | MtrunA17_Chr7g0269741 | 47.141 | 927 | 365 | 20 | 225 | 1052 | 256 | 1156 | 0.0 | 773 |
Msa0524950 | MtrunA17_Chr1g0165411 | 44.717 | 937 | 378 | 17 | 216 | 1052 | 193 | 1089 | 0.0 | 761 |
Msa0524950 | MtrunA17_Chr1g0165421 | 44.025 | 954 | 408 | 18 | 211 | 1064 | 202 | 1129 | 0.0 | 755 |
Msa0524950 | MtrunA17_Chr2g0297351 | 44.046 | 949 | 397 | 19 | 217 | 1065 | 108 | 1022 | 0.0 | 754 |
Msa0524950 | MtrunA17_Chr7g0274751 | 39.159 | 904 | 334 | 23 | 217 | 1052 | 43 | 798 | 0.0 | 565 |
Msa0524950 | MtrunA17_Chr3g0102531 | 34.802 | 681 | 364 | 16 | 280 | 953 | 21 | 628 | 2.42e-117 | 379 |
Msa0524950 | MtrunA17_Chr2g0322361 | 32.941 | 765 | 406 | 17 | 310 | 1043 | 52 | 740 | 5.58e-117 | 378 |
Msa0524950 | MtrunA17_Chr3g0102541 | 34.940 | 664 | 353 | 16 | 297 | 953 | 38 | 629 | 1.64e-116 | 376 |
Msa0524950 | MtrunA17_Chr2g0322371 | 31.736 | 772 | 411 | 18 | 310 | 1050 | 47 | 733 | 1.13e-111 | 363 |
Msa0524950 | MtrunA17_Chr2g0322351 | 32.558 | 774 | 412 | 21 | 297 | 1043 | 37 | 727 | 6.69e-109 | 356 |
Msa0524950 | MtrunA17_Chr4g0025201 | 31.322 | 779 | 427 | 17 | 297 | 1046 | 37 | 736 | 1.31e-105 | 347 |
Msa0524950 | MtrunA17_Chr3g0095791 | 28.010 | 764 | 454 | 17 | 275 | 1028 | 13 | 690 | 2.34e-92 | 310 |
Msa0524950 | MtrunA17_Chr3g0077511 | 27.392 | 763 | 451 | 18 | 281 | 1028 | 19 | 693 | 3.10e-89 | 301 |
Msa0524950 | MtrunA17_Chr3g0102551 | 38.281 | 384 | 210 | 8 | 280 | 649 | 23 | 393 | 2.50e-83 | 286 |
Msa0524950 | MtrunA17_Chr3g0102551 | 31.132 | 212 | 124 | 4 | 761 | 953 | 426 | 634 | 4.39e-26 | 115 |
Msa0524950 | MtrunA17_Chr2g0322341 | 41.311 | 305 | 166 | 5 | 311 | 615 | 52 | 343 | 6.15e-74 | 249 |
Msa0524950 | MtrunA17_Chr1g0186381 | 36.250 | 400 | 222 | 8 | 259 | 649 | 4 | 379 | 2.97e-69 | 246 |
Msa0524950 | MtrunA17_Chr1g0186381 | 24.611 | 321 | 207 | 7 | 755 | 1047 | 421 | 734 | 1.24e-27 | 120 |
Msa0524950 | MtrunA17_Chr4g0046401 | 36.702 | 376 | 211 | 7 | 281 | 649 | 24 | 379 | 3.59e-69 | 246 |
Msa0524950 | MtrunA17_Chr4g0046401 | 29.360 | 344 | 214 | 8 | 724 | 1043 | 392 | 730 | 3.96e-33 | 137 |
Msa0524950 | MtrunA17_Chr3g0094861 | 61.053 | 190 | 69 | 3 | 6 | 192 | 3 | 190 | 1.19e-65 | 224 |
Msa0524950 | MtrunA17_Chr2g0307191 | 35.054 | 368 | 205 | 6 | 281 | 647 | 19 | 353 | 2.17e-65 | 234 |
Msa0524950 | MtrunA17_Chr2g0307191 | 25.000 | 328 | 211 | 8 | 728 | 1028 | 372 | 691 | 6.56e-23 | 105 |
Msa0524950 | MtrunA17_Chr2g0298581 | 35.294 | 374 | 206 | 7 | 281 | 652 | 19 | 358 | 1.79e-63 | 229 |
Msa0524950 | MtrunA17_Chr2g0298581 | 25.758 | 330 | 210 | 8 | 725 | 1027 | 369 | 690 | 7.98e-26 | 114 |
Msa0524950 | MtrunA17_Chr0c03g0490021 | 69.672 | 122 | 37 | 0 | 899 | 1020 | 1 | 122 | 3.21e-52 | 179 |
Msa0524950 | MtrunA17_Chr7g0252781 | 91.667 | 84 | 7 | 0 | 987 | 1070 | 6 | 89 | 1.04e-44 | 156 |
Msa0524950 | MtrunA17_Chr2g0322331 | 29.973 | 367 | 227 | 7 | 703 | 1043 | 9 | 371 | 4.04e-41 | 155 |
Msa0524950 | MtrunA17_Chr3g0126641 | 39.091 | 220 | 84 | 10 | 585 | 782 | 1 | 192 | 4.70e-32 | 124 |
Msa0524950 | MtrunA17_Chr2g0307241 | 39.375 | 160 | 86 | 4 | 281 | 439 | 19 | 168 | 1.90e-31 | 122 |
Msa0524950 | MtrunA17_Chr8g0355061 | 89.474 | 57 | 6 | 0 | 899 | 955 | 1 | 57 | 6.54e-31 | 115 |
Msa0524950 | MtrunA17_Chr7g0267741 | 58.333 | 60 | 25 | 0 | 35 | 94 | 4 | 63 | 1.24e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524950 | AT4G32410.1 | 82.613 | 1087 | 163 | 7 | 1 | 1068 | 1 | 1080 | 0.0 | 1824 |
Msa0524950 | AT2G25540.1 | 77.976 | 1067 | 196 | 6 | 7 | 1055 | 1 | 1046 | 0.0 | 1743 |
Msa0524950 | AT5G05170.1 | 67.598 | 1074 | 307 | 11 | 25 | 1070 | 5 | 1065 | 0.0 | 1481 |
Msa0524950 | AT5G17420.1 | 63.437 | 1094 | 308 | 16 | 1 | 1070 | 1 | 1026 | 0.0 | 1378 |
Msa0524950 | AT5G09870.1 | 61.566 | 1098 | 364 | 17 | 1 | 1070 | 1 | 1068 | 0.0 | 1348 |
Msa0524950 | AT5G44030.1 | 61.510 | 1086 | 316 | 12 | 34 | 1070 | 17 | 1049 | 0.0 | 1345 |
Msa0524950 | AT5G44030.2 | 61.040 | 1096 | 334 | 12 | 34 | 1070 | 17 | 1078 | 0.0 | 1342 |
Msa0524950 | AT5G64740.1 | 61.101 | 1108 | 368 | 16 | 1 | 1070 | 1 | 1083 | 0.0 | 1340 |
Msa0524950 | AT2G21770.1 | 60.325 | 1109 | 378 | 15 | 1 | 1070 | 1 | 1086 | 0.0 | 1337 |
Msa0524950 | AT4G39350.1 | 59.799 | 1092 | 407 | 9 | 1 | 1070 | 1 | 1082 | 0.0 | 1316 |
Msa0524950 | AT4G18780.1 | 59.470 | 1056 | 317 | 14 | 39 | 1066 | 8 | 980 | 0.0 | 1242 |
Msa0524950 | AT5G44030.3 | 69.689 | 772 | 185 | 7 | 346 | 1070 | 1 | 770 | 0.0 | 1113 |
Msa0524950 | AT3G03050.1 | 46.745 | 937 | 370 | 22 | 217 | 1052 | 223 | 1131 | 0.0 | 789 |
Msa0524950 | AT5G16910.1 | 47.565 | 883 | 338 | 20 | 264 | 1052 | 280 | 1131 | 0.0 | 774 |
Msa0524950 | AT4G38190.1 | 45.070 | 923 | 400 | 16 | 211 | 1052 | 196 | 1092 | 0.0 | 770 |
Msa0524950 | AT2G33100.2 | 44.909 | 933 | 391 | 18 | 217 | 1052 | 118 | 1024 | 0.0 | 768 |
Msa0524950 | AT2G33100.1 | 44.909 | 933 | 391 | 18 | 217 | 1052 | 118 | 1024 | 0.0 | 768 |
Msa0524950 | AT1G02730.1 | 47.032 | 893 | 352 | 17 | 260 | 1052 | 297 | 1168 | 0.0 | 766 |
Msa0524950 | AT1G32180.1 | 42.903 | 937 | 395 | 18 | 225 | 1050 | 59 | 966 | 0.0 | 733 |
Msa0524950 | AT1G32180.2 | 42.903 | 937 | 395 | 18 | 225 | 1050 | 59 | 966 | 0.0 | 733 |
Msa0524950 | AT2G32530.1 | 31.599 | 807 | 432 | 19 | 285 | 1048 | 24 | 753 | 9.53e-116 | 375 |
Msa0524950 | AT4G15320.5 | 31.754 | 781 | 421 | 18 | 281 | 1022 | 23 | 730 | 1.67e-113 | 369 |
Msa0524950 | AT4G15320.3 | 31.754 | 781 | 421 | 18 | 281 | 1022 | 23 | 730 | 2.33e-113 | 369 |
Msa0524950 | AT2G32620.1 | 32.980 | 755 | 393 | 18 | 309 | 1024 | 50 | 730 | 5.80e-112 | 365 |
Msa0524950 | AT2G32610.1 | 31.297 | 802 | 439 | 20 | 288 | 1048 | 27 | 757 | 1.33e-110 | 362 |
Msa0524950 | AT2G32540.1 | 31.410 | 780 | 419 | 17 | 309 | 1048 | 50 | 753 | 2.68e-110 | 361 |
Msa0524950 | AT4G15320.4 | 31.692 | 792 | 422 | 20 | 281 | 1022 | 23 | 745 | 4.81e-110 | 360 |
Msa0524950 | AT4G15290.1 | 30.848 | 778 | 428 | 18 | 309 | 1048 | 50 | 755 | 4.05e-106 | 350 |
Msa0524950 | AT2G32620.4 | 32.525 | 701 | 368 | 16 | 362 | 1024 | 1 | 634 | 3.21e-101 | 333 |
Msa0524950 | AT2G32620.3 | 34.923 | 587 | 292 | 13 | 309 | 875 | 50 | 566 | 4.20e-101 | 332 |
Msa0524950 | AT4G15320.2 | 30.654 | 734 | 354 | 17 | 281 | 948 | 23 | 667 | 1.93e-97 | 327 |
Msa0524950 | AT2G32620.2 | 33.571 | 560 | 280 | 13 | 309 | 848 | 50 | 537 | 3.61e-90 | 300 |
Msa0524950 | AT4G15320.1 | 29.625 | 773 | 354 | 20 | 281 | 948 | 23 | 710 | 2.33e-89 | 306 |
Msa0524950 | AT1G55850.1 | 39.642 | 391 | 203 | 10 | 309 | 683 | 65 | 438 | 4.72e-78 | 271 |
Msa0524950 | AT1G55850.1 | 33.333 | 204 | 112 | 5 | 763 | 946 | 420 | 619 | 9.62e-26 | 114 |
Msa0524950 | AT4G24010.1 | 38.987 | 395 | 212 | 11 | 279 | 661 | 25 | 402 | 2.03e-72 | 256 |
Msa0524950 | AT4G24010.1 | 29.900 | 301 | 184 | 5 | 748 | 1026 | 409 | 704 | 2.11e-32 | 136 |
Msa0524950 | AT4G23990.1 | 38.847 | 399 | 215 | 11 | 279 | 665 | 44 | 425 | 4.10e-71 | 253 |
Msa0524950 | AT4G23990.1 | 31.757 | 296 | 173 | 6 | 750 | 1022 | 430 | 719 | 9.82e-34 | 140 |
Msa0524950 | AT4G24000.1 | 38.462 | 390 | 209 | 10 | 279 | 660 | 22 | 388 | 2.97e-70 | 249 |
Msa0524950 | AT4G24000.1 | 27.760 | 317 | 196 | 8 | 754 | 1044 | 405 | 714 | 4.20e-31 | 131 |
Msa0524950 | AT4G23990.2 | 45.562 | 169 | 88 | 3 | 501 | 665 | 43 | 211 | 1.61e-34 | 140 |
Msa0524950 | AT4G23990.2 | 31.757 | 296 | 173 | 6 | 750 | 1022 | 216 | 505 | 5.37e-34 | 139 |
Msa0524950 | AT4G24000.2 | 45.625 | 160 | 81 | 2 | 501 | 660 | 43 | 196 | 3.61e-34 | 139 |
Msa0524950 | AT4G24000.2 | 27.760 | 317 | 196 | 8 | 754 | 1044 | 213 | 522 | 2.31e-31 | 130 |
Find 323 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTTCTTGAAGGGTCTTT+TGG | 0.125595 | 3_4:-78494970 | Msa0524950:CDS |
TCAGAAGATTGATTACTTAA+AGG | 0.160961 | 3_4:-78497925 | Msa0524950:CDS |
CAATCTTGGGGTCCACTATT+TGG | 0.164587 | 3_4:-78495032 | Msa0524950:CDS |
TTAGCAGGCATTGTCCTTTA+TGG | 0.181426 | 3_4:-78495639 | Msa0524950:CDS |
AGATTGGTAACCACTGTTTA+TGG | 0.193349 | 3_4:+78495049 | None:intergenic |
TATATCCTCCATATTAAATA+TGG | 0.199338 | 3_4:+78496517 | None:intergenic |
CACCATTCCCATATTTAATA+TGG | 0.200910 | 3_4:-78496525 | Msa0524950:CDS |
CGGTTAATGGGAGACCATTT+TGG | 0.207288 | 3_4:+78498353 | None:intergenic |
GCCTCTTCCGGCATGGTTGC+TGG | 0.232202 | 3_4:-78500780 | Msa0524950:CDS |
GAAAGCTCTTCTTTGCTATA+TGG | 0.232926 | 3_4:-78495010 | Msa0524950:CDS |
TATGAGTTTAAGTCCTTTGA+TGG | 0.251110 | 3_4:+78499400 | None:intergenic |
CAGATAAGTCTCACGGTTAA+TGG | 0.255036 | 3_4:+78498340 | None:intergenic |
TTCAAATTCTTCAATGGTTT+CGG | 0.261810 | 3_4:+78500500 | None:intergenic |
GAAAGGTCAGGATGGTATTC+AGG | 0.270878 | 3_4:-78496735 | Msa0524950:CDS |
CCGAACTACTTCTGGTCCTT+TGG | 0.273359 | 3_4:-78499577 | Msa0524950:CDS |
TCAGGTGCTTCGGTGGGCCT+TGG | 0.289335 | 3_4:-78495680 | Msa0524950:CDS |
GTGTTCCGGCTGATAGTTCT+TGG | 0.298741 | 3_4:-78498488 | Msa0524950:CDS |
CATTAACCGTGAGACTTATC+TGG | 0.303947 | 3_4:-78498339 | Msa0524950:CDS |
CAGAATTGAAGTAGTGAAAA+TGG | 0.304335 | 3_4:+78495346 | None:intergenic |
TGTGGTATGCAGGTGTTCTT+AGG | 0.305393 | 3_4:-78497558 | Msa0524950:intron |
GGTGGAGAAACGAGCAGTTT+TGG | 0.306946 | 3_4:-78495289 | Msa0524950:CDS |
CAATAATAGCAAAGCTCTTA+AGG | 0.307530 | 3_4:-78497037 | Msa0524950:CDS |
CAATTTCCGCAGAGATTTGA+TGG | 0.308394 | 3_4:-78496961 | Msa0524950:CDS |
CAATCTGTCCGAACTACTTC+TGG | 0.316657 | 3_4:-78499585 | Msa0524950:CDS |
CTTCAGTTATCTGTGAGATT+TGG | 0.320317 | 3_4:-78498406 | Msa0524950:CDS |
GTTCGGACAGATTGATTATC+AGG | 0.323657 | 3_4:+78499594 | None:intergenic |
CACAATATGGAAGCCTCTTC+CGG | 0.324269 | 3_4:-78500792 | Msa0524950:exon |
TTCTATATTCTCTTTGTTGT+GGG | 0.324824 | 3_4:-78494895 | Msa0524950:CDS |
GGACTTAAACTCATATGGTT+TGG | 0.327231 | 3_4:-78499392 | Msa0524950:CDS |
ATCGTGTTGTCATCGTGTTC+CGG | 0.328735 | 3_4:-78498502 | Msa0524950:CDS |
CACCAACCATTGTTATTGTC+TGG | 0.330309 | 3_4:-78494932 | Msa0524950:CDS |
GTACTTATTGTGAATTTGAT+AGG | 0.341544 | 3_4:-78495095 | Msa0524950:CDS |
CATCACTCTCTGTCACAATA+TGG | 0.342160 | 3_4:-78500805 | Msa0524950:exon |
GGGCTTCTCAAAGTGCTTGC+AGG | 0.342959 | 3_4:-78495224 | Msa0524950:CDS |
GACTTAAACTCATATGGTTT+GGG | 0.349610 | 3_4:-78499391 | Msa0524950:CDS |
TTCATGATGGATCCTGCTTA+TGG | 0.354746 | 3_4:-78497003 | Msa0524950:CDS |
TAAACAGTGGTTACCAATCT+TGG | 0.356541 | 3_4:-78495046 | Msa0524950:CDS |
AAAGCTCTTCTTTGCTATAT+GGG | 0.357334 | 3_4:-78495009 | Msa0524950:CDS |
AATTACTAAAACATTAATCT+TGG | 0.357923 | 3_4:+78494454 | None:intergenic |
TGGTTGCCTTGGATCAATAT+AGG | 0.363514 | 3_4:+78499527 | None:intergenic |
TCATAACAATCTCGACAAAC+AGG | 0.367078 | 3_4:+78500392 | None:intergenic |
TTGATGTCTCTAAATCAAAA+AGG | 0.370267 | 3_4:+78494768 | None:intergenic |
TCATTTATACCCTTTCTTGA+AGG | 0.370848 | 3_4:-78494979 | Msa0524950:CDS |
CTACTTCAATTCTGGAGCTT+AGG | 0.370914 | 3_4:-78495337 | Msa0524950:CDS |
CATTATTGTTAAGAGTTGTT+GGG | 0.375779 | 3_4:-78496621 | Msa0524950:CDS |
TCAAAGGACTTAAACTCATA+TGG | 0.375839 | 3_4:-78499397 | Msa0524950:CDS |
GGATCATCCTGGAATGATTC+AGG | 0.377094 | 3_4:-78497651 | Msa0524950:intron |
TCTTGCTATGTATCTGATGA+TGG | 0.377670 | 3_4:-78498062 | Msa0524950:CDS |
CGAACTACTTCTGGTCCTTT+GGG | 0.379490 | 3_4:-78499576 | Msa0524950:CDS |
ACACGATGACAACACGATAA+GGG | 0.380330 | 3_4:+78498507 | None:intergenic |
GCCACCTCGTCCGGCATTCA+AGG | 0.383947 | 3_4:-78495737 | Msa0524950:CDS |
TTCTGAAGAAAATAAAATTC+AGG | 0.388075 | 3_4:+78497942 | None:intergenic |
CAATTCTACAACTCTTCTTA+AGG | 0.389540 | 3_4:-78496195 | Msa0524950:CDS |
CAACTCTTAACAATAATGTT+AGG | 0.389603 | 3_4:+78496626 | None:intergenic |
ACATTATTGTTAAGAGTTGT+TGG | 0.390179 | 3_4:-78496622 | Msa0524950:CDS |
CATTTATACCCTTTCTTGAA+GGG | 0.394919 | 3_4:-78494978 | Msa0524950:CDS |
CTTAAGAAGAGTTGTAGAAT+TGG | 0.397836 | 3_4:+78496196 | None:intergenic |
TGCATTGTCCAGCCTTCCTC+TGG | 0.400784 | 3_4:+78497707 | None:intergenic |
AAACAGTGGTTACCAATCTT+GGG | 0.401254 | 3_4:-78495045 | Msa0524950:CDS |
GAACTGGTTGCTGTTTCAAT+AGG | 0.402726 | 3_4:-78496697 | Msa0524950:CDS |
GGCCCTGTCTATGTGGGAAC+TGG | 0.402866 | 3_4:-78496713 | Msa0524950:CDS |
CAGGTGCTTCGGTGGGCCTT+GGG | 0.403218 | 3_4:-78495679 | Msa0524950:CDS |
GGCTGGAGCTATGAATGCTT+TGG | 0.405899 | 3_4:-78497442 | Msa0524950:intron |
ACAGTGTTTGCAGTTACAAT+AGG | 0.406210 | 3_4:+78498125 | None:intergenic |
TGATCCCTGGGATTATTTCC+AGG | 0.406836 | 3_4:+78497668 | None:intergenic |
CAAATAGTGGACCCCAAGAT+TGG | 0.407938 | 3_4:+78495033 | None:intergenic |
CCCAAAAGACCCTTCAAGAA+AGG | 0.413353 | 3_4:+78494969 | None:intergenic |
GTTGATACCACACTGACTAT+TGG | 0.415397 | 3_4:+78494830 | None:intergenic |
TATTCTCTTTGTTGTGGGTG+AGG | 0.416062 | 3_4:-78494890 | Msa0524950:CDS |
TGTCCATTCAAATTCTTCAA+TGG | 0.418001 | 3_4:+78500494 | None:intergenic |
ATTGAAGGGACTGGTTCTAA+TGG | 0.418168 | 3_4:-78499262 | Msa0524950:CDS |
CGATCTGCGTTCAGATATAC+AGG | 0.421846 | 3_4:+78500855 | None:intergenic |
CTTCTATATTCTCTTTGTTG+TGG | 0.423346 | 3_4:-78494896 | Msa0524950:CDS |
AACAAGCTCGTTACGATTGT+GGG | 0.423362 | 3_4:+78500755 | None:intergenic |
TTCAATAGGCAAGCTTTGTA+TGG | 0.426485 | 3_4:-78496683 | Msa0524950:CDS |
ACTATTGGATGATGATTTGT+TGG | 0.429140 | 3_4:+78494845 | None:intergenic |
AGATAAGTCTCACGGTTAAT+GGG | 0.429796 | 3_4:+78498341 | None:intergenic |
CGTAATACCTGAATCATTCC+AGG | 0.429868 | 3_4:+78497644 | None:intergenic |
GTCACGATTCTGCCGACAGC+GGG | 0.430935 | 3_4:-78500725 | Msa0524950:CDS |
GGTTGCCTTGGATCAATATA+GGG | 0.431455 | 3_4:+78499528 | None:intergenic |
CTGAGCTATACGTGTTCAAA+TGG | 0.432318 | 3_4:-78495145 | Msa0524950:CDS |
AAGAAGAGCTTTCCAAATAG+TGG | 0.434325 | 3_4:+78495020 | None:intergenic |
CTATTGCATGCCACCTCGTC+CGG | 0.435125 | 3_4:-78495746 | Msa0524950:CDS |
AAGAGCTTGGAGAAGCGTTT+CGG | 0.436107 | 3_4:-78496278 | Msa0524950:CDS |
CAATAGAGATCTTCCTTAGC+AGG | 0.441321 | 3_4:-78495654 | Msa0524950:CDS |
AAGCAATGGGATTGAGGTAA+AGG | 0.441416 | 3_4:+78495552 | None:intergenic |
AACACGATGACAACACGATA+AGG | 0.448331 | 3_4:+78498506 | None:intergenic |
AGAAGATGCCAGAGGAAGGC+TGG | 0.449789 | 3_4:-78497715 | Msa0524950:CDS |
AAATAAAATTCAGGTGCTCT+TGG | 0.450426 | 3_4:+78497951 | None:intergenic |
TTCTTGTGATGTTGGAAGCC+TGG | 0.450509 | 3_4:+78497465 | None:intergenic |
CCATTGTAGCCATACCATAA+AGG | 0.451492 | 3_4:+78495625 | None:intergenic |
ACCGTCTCAATCAGGTGCTT+CGG | 0.452266 | 3_4:-78495690 | Msa0524950:CDS |
CAACCAGTTCCCACATAGAC+AGG | 0.454853 | 3_4:+78496710 | None:intergenic |
ATCTGGAGAGGCTTGCCATA+AGG | 0.458191 | 3_4:-78498322 | Msa0524950:intron |
AAACCATTGAAGAATTTGAA+TGG | 0.458648 | 3_4:-78500497 | Msa0524950:CDS |
AGATCTTCCTCAGTCAAAAC+AGG | 0.459144 | 3_4:+78496653 | None:intergenic |
CATGTCTTCTTTCCATAAGC+AGG | 0.459266 | 3_4:+78496991 | None:intergenic |
CTTCTGAGCTTTAGCAACAT+AGG | 0.459632 | 3_4:+78497733 | None:intergenic |
AGCAATGGGATTGAGGTAAA+GGG | 0.460663 | 3_4:+78495553 | None:intergenic |
GCCAGCAACCATGCCGGAAG+AGG | 0.463003 | 3_4:+78500779 | None:intergenic |
CTTGGCCTGGAAATAATCCC+AGG | 0.464926 | 3_4:-78497673 | Msa0524950:CDS |
TAGTGAAAATGGAGGTAAAG+AGG | 0.465958 | 3_4:+78495357 | None:intergenic |
CTCCAGCCTTCTTGTGATGT+TGG | 0.467134 | 3_4:+78497457 | None:intergenic |
GGTCAGCTGAGATGAAGAAA+TGG | 0.467573 | 3_4:+78498529 | None:intergenic |
ATGGGTACAATCCGACTCAT+AGG | 0.468042 | 3_4:+78498548 | None:intergenic |
ATATCCTCCATATTAAATAT+GGG | 0.468622 | 3_4:+78496518 | None:intergenic |
TGTTGGGGTTCTAGAAAGAA+AGG | 0.469786 | 3_4:-78496605 | Msa0524950:CDS |
GAGACGGTCTGAAAGATTGA+TGG | 0.469848 | 3_4:+78495705 | None:intergenic |
GAAGCGTTTCGGACAGTCTC+CGG | 0.470838 | 3_4:-78496267 | Msa0524950:CDS |
ACCAACCATTGTTATTGTCT+GGG | 0.471579 | 3_4:-78494931 | Msa0524950:CDS |
TCTTTCAGACCGTCTCAATC+AGG | 0.471616 | 3_4:-78495698 | Msa0524950:CDS |
AGCACTATACCTGGTTGCCT+TGG | 0.471870 | 3_4:+78499516 | None:intergenic |
CAAAGGCAAATGACGAAGAC+GGG | 0.472073 | 3_4:-78495175 | Msa0524950:CDS |
GGAAGGAAAGGGTTGAAGGT+TGG | 0.478024 | 3_4:-78499357 | Msa0524950:CDS |
GTCATTTGCCTTTGATGTAA+CGG | 0.478885 | 3_4:+78495184 | None:intergenic |
CAGGATGGAACTCCTTGGCC+TGG | 0.479035 | 3_4:-78497686 | Msa0524950:CDS |
GTTGTAGAATTGGTTGAAGG+TGG | 0.481332 | 3_4:+78496206 | None:intergenic |
CTATTGGATGATGATTTGTT+GGG | 0.483405 | 3_4:+78494846 | None:intergenic |
ATTTAATATGGAGGATATAG+AGG | 0.485050 | 3_4:-78496513 | Msa0524950:CDS |
AAACTCGGCTGTTTCAGATA+AGG | 0.490058 | 3_4:+78498016 | None:intergenic |
AGAGTTGTAGAATTGGTTGA+AGG | 0.490811 | 3_4:+78496203 | None:intergenic |
TGTGAATTTGATAGGTATTG+TGG | 0.491287 | 3_4:-78495087 | Msa0524950:CDS |
GTCTCAATCAGGTGCTTCGG+TGG | 0.494067 | 3_4:-78495687 | Msa0524950:CDS |
GACTGGAAGGAAAGGGTTGA+AGG | 0.495484 | 3_4:-78499361 | Msa0524950:CDS |
CTTCAATTCTGGAGCTTAGG+TGG | 0.495786 | 3_4:-78495334 | Msa0524950:CDS |
GAACAAGCTCGTTACGATTG+TGG | 0.496218 | 3_4:+78500754 | None:intergenic |
CCAAAAGACCCTTCAAGAAA+GGG | 0.497486 | 3_4:+78494970 | None:intergenic |
CCAGATCAACTTGAAAGGTC+AGG | 0.497960 | 3_4:-78496747 | Msa0524950:intron |
CCAAAGGACCAGAAGTAGTT+CGG | 0.499714 | 3_4:+78499577 | None:intergenic |
AGGCATTGTCCTTTATGGTA+TGG | 0.500564 | 3_4:-78495634 | Msa0524950:CDS |
AATATGAAGAATTCAAAGTA+AGG | 0.503429 | 3_4:-78497763 | Msa0524950:CDS |
AAGGATTACAGTTTGGCCAT+TGG | 0.503990 | 3_4:+78500043 | None:intergenic |
TTCACAATAAGTACTGTTGT+AGG | 0.505494 | 3_4:+78495104 | None:intergenic |
ACGAGACACATAAACAAGCC+TGG | 0.506083 | 3_4:+78497497 | None:intergenic |
GGAGGCTATGTGTTTCATGA+TGG | 0.506640 | 3_4:-78497016 | Msa0524950:CDS |
CACCCACATCTTTGCAAACT+CGG | 0.507465 | 3_4:+78498001 | None:intergenic |
TCATCATCTCCATCGACTCT+AGG | 0.507830 | 3_4:+78500209 | None:intergenic |
GTTATGAAGACAAGACAGAA+TGG | 0.508195 | 3_4:-78496148 | Msa0524950:CDS |
TCGTCGCTCCTTAACAAAAG+AGG | 0.508659 | 3_4:+78497890 | None:intergenic |
TATGAATATGAGCGAAAAGA+AGG | 0.509434 | 3_4:-78500374 | Msa0524950:CDS |
GGCTTCTCAAAGTGCTTGCA+GGG | 0.510259 | 3_4:-78495223 | Msa0524950:CDS |
AATTAGTATTGACAGATGTC+TGG | 0.510676 | 3_4:-78499630 | Msa0524950:intron |
GCACACAGTACGCAAGCAAT+GGG | 0.511664 | 3_4:+78495539 | None:intergenic |
CGACAAAGGAGTATATGATA+AGG | 0.512710 | 3_4:+78494404 | None:intergenic |
TTTGTTGGGATCAGAGATGA+AGG | 0.512730 | 3_4:+78494860 | None:intergenic |
AATGCAAAACTAGATACAAA+AGG | 0.514508 | 3_4:-78500334 | Msa0524950:CDS |
TAGAAACAAGAATGCTATGC+AGG | 0.514553 | 3_4:+78494659 | None:intergenic |
TTTGTTGCTTGTAATGAATG+TGG | 0.517856 | 3_4:-78500419 | Msa0524950:CDS |
AAAGGTCAGGATGGTATTCA+GGG | 0.519336 | 3_4:-78496734 | Msa0524950:CDS |
TCTAATGTCTCAGAAGAGCT+TGG | 0.520171 | 3_4:-78496291 | Msa0524950:CDS |
TAGCAAGAAACCTTGTCGAC+AGG | 0.521061 | 3_4:+78498077 | None:intergenic |
TGGAAACTGATCCAAAATCC+AGG | 0.523796 | 3_4:+78498373 | None:intergenic |
TTAAGATGCATGCACGTGGT+TGG | 0.524436 | 3_4:-78495777 | Msa0524950:intron |
CCTTTATGGTATGGCTACAA+TGG | 0.524681 | 3_4:-78495625 | Msa0524950:CDS |
CTCCATATTAAATATGGGAA+TGG | 0.526287 | 3_4:+78496523 | None:intergenic |
GAGCTTAGGTGGAGTGGTGT+TGG | 0.527750 | 3_4:-78495323 | Msa0524950:CDS |
AGTGAGTGAGCTTTCTCAGA+TGG | 0.527989 | 3_4:+78499552 | None:intergenic |
CAGAGAGTGATGCAGATGAA+TGG | 0.528384 | 3_4:+78500816 | None:intergenic |
TTATGAAGACAAGACAGAAT+GGG | 0.529723 | 3_4:-78496147 | Msa0524950:CDS |
TACAGTTCCGGTGAGAATTG+TGG | 0.530491 | 3_4:-78499425 | Msa0524950:intron |
ATAAAGGACAATGCCTGCTA+AGG | 0.530638 | 3_4:+78495641 | None:intergenic |
GATGAGGCCTCTCATGAGGC+TGG | 0.531213 | 3_4:-78495599 | Msa0524950:CDS |
CAATGCAGGATGGAACTCCT+TGG | 0.533087 | 3_4:-78497691 | Msa0524950:CDS |
GAAGAAGACAATATTGCGAT+TGG | 0.533132 | 3_4:+78496915 | None:intergenic |
GATATAGAGGAGGGTGTCGA+AGG | 0.533539 | 3_4:-78496500 | Msa0524950:intron |
GTTTCTGCTGTCTTGACCAA+CGG | 0.535214 | 3_4:-78497096 | Msa0524950:CDS |
TAAGGAGCGACGAGCAATGA+AGG | 0.537145 | 3_4:-78497880 | Msa0524950:intron |
TGGCAGGTTATGATGATGAA+AGG | 0.538099 | 3_4:-78496319 | Msa0524950:intron |
ATTATTGTTAAGAGTTGTTG+GGG | 0.538462 | 3_4:-78496620 | Msa0524950:CDS |
CATATATGTGGTGAGGATGT+TGG | 0.538983 | 3_4:-78500464 | Msa0524950:CDS |
TATTCAGGGCCCTGTCTATG+TGG | 0.539274 | 3_4:-78496720 | Msa0524950:CDS |
CCACCTCGTCCGGCATTCAA+GGG | 0.540494 | 3_4:-78495736 | Msa0524950:CDS |
AGCGGAGGAGGAGATATTGA+AGG | 0.541051 | 3_4:-78499277 | Msa0524950:CDS |
GTGAGTGAGCTTTCTCAGAT+GGG | 0.542714 | 3_4:+78499553 | None:intergenic |
AGCACACAGTACGCAAGCAA+TGG | 0.543002 | 3_4:+78495538 | None:intergenic |
GCTGATGGGAAAAGCGGAGG+AGG | 0.543579 | 3_4:-78499289 | Msa0524950:CDS |
TGGCCATTGGTGAGAAGAGG+AGG | 0.543739 | 3_4:+78500056 | None:intergenic |
CATATTAAATATGGGAATGG+TGG | 0.544392 | 3_4:+78496526 | None:intergenic |
TATGGTATGGCTACAATGGA+AGG | 0.544960 | 3_4:-78495621 | Msa0524950:CDS |
ATCATTCCAGGATGATCCCT+GGG | 0.546093 | 3_4:+78497656 | None:intergenic |
TTCCAACATCACAAGAAGGC+TGG | 0.547234 | 3_4:-78497459 | Msa0524950:CDS |
AATAATCCCAGGGATCATCC+TGG | 0.549110 | 3_4:-78497662 | Msa0524950:CDS |
ATGGTTTGGGAAATGTTGAC+TGG | 0.549411 | 3_4:-78499378 | Msa0524950:CDS |
GTCAGCTGAGATGAAGAAAT+GGG | 0.549519 | 3_4:+78498530 | None:intergenic |
ACAAGGTGCAATGTGATGAT+TGG | 0.550221 | 3_4:-78494560 | Msa0524950:three_prime_UTR |
TAGAATTGGTTGAAGGTGGA+AGG | 0.551173 | 3_4:+78496210 | None:intergenic |
AGAGGAAGGCTGGACAATGC+AGG | 0.552063 | 3_4:-78497705 | Msa0524950:CDS |
GGAGGAGATATTGAAGGGAC+TGG | 0.553921 | 3_4:-78499271 | Msa0524950:CDS |
GTGGTGTTGGTATAGAAGAC+TGG | 0.554915 | 3_4:-78495310 | Msa0524950:CDS |
GAACCCTTGAATGCCGGACG+AGG | 0.555094 | 3_4:+78495733 | None:intergenic |
GTGTCTCGTGAAAAGCGACC+AGG | 0.555283 | 3_4:-78497483 | Msa0524950:CDS |
GTACTGACAAATACGTCGAC+AGG | 0.555484 | 3_4:+78498170 | None:intergenic |
CTGGGATTATTTCCAGGCCA+AGG | 0.555806 | 3_4:+78497674 | None:intergenic |
ACAATAGGTGGCTCTTTGAG+AGG | 0.557014 | 3_4:+78498140 | None:intergenic |
CAGCCGAGTTTGCAAAGATG+TGG | 0.557850 | 3_4:-78498004 | Msa0524950:CDS |
CATTCCCATATTTAATATGG+AGG | 0.558239 | 3_4:-78496522 | Msa0524950:CDS |
TCTCAATCAGGTGCTTCGGT+GGG | 0.558685 | 3_4:-78495686 | Msa0524950:CDS |
GCAATCCACGTTATCAGTTG+TGG | 0.559514 | 3_4:-78496170 | Msa0524950:CDS |
AAGGGTGGGAATAAGAAGTA+CGG | 0.561091 | 3_4:-78496581 | Msa0524950:CDS |
ATTCTGGAGCTTAGGTGGAG+TGG | 0.561581 | 3_4:-78495329 | Msa0524950:CDS |
ATTCAGGGCCCTGTCTATGT+GGG | 0.562278 | 3_4:-78496719 | Msa0524950:CDS |
CACTTCCCTATATTGATCCA+AGG | 0.563873 | 3_4:-78499533 | Msa0524950:CDS |
GGAGCAGAACCCTTGAATGC+CGG | 0.564720 | 3_4:+78495727 | None:intergenic |
CGTCGCTCCTTAACAAAAGA+GGG | 0.564871 | 3_4:+78497891 | None:intergenic |
TCAGGGAGTCCTAGAGTCGA+TGG | 0.565975 | 3_4:-78500218 | Msa0524950:intron |
GTACGCAAGCAATGGGATTG+AGG | 0.569333 | 3_4:+78495546 | None:intergenic |
CAGATGGCAATGAACTTCCC+AGG | 0.570271 | 3_4:-78497515 | Msa0524950:CDS |
CGAGACACATAAACAAGCCT+GGG | 0.571703 | 3_4:+78497498 | None:intergenic |
CACGATGACAACACGATAAG+GGG | 0.571798 | 3_4:+78498508 | None:intergenic |
GAAGTACGGTGACAAGAAGA+GGG | 0.571885 | 3_4:-78496567 | Msa0524950:CDS |
CTTGATGATCAGAGTTGTGT+TGG | 0.572655 | 3_4:-78494480 | Msa0524950:three_prime_UTR |
AATCATTCCAGGATGATCCC+TGG | 0.573033 | 3_4:+78497655 | None:intergenic |
AGCAAGAAACCTTGTCGACA+GGG | 0.574017 | 3_4:+78498078 | None:intergenic |
AGAAGTACGGTGACAAGAAG+AGG | 0.574021 | 3_4:-78496568 | Msa0524950:CDS |
TAAGTAACTTTGCTAGCATG+TGG | 0.574212 | 3_4:-78495388 | Msa0524950:CDS |
ACAATAAGTACTGTTGTAGG+AGG | 0.576226 | 3_4:+78495107 | None:intergenic |
TTTGTGAGAAGACAAAATGC+AGG | 0.576962 | 3_4:+78495514 | None:intergenic |
AGACGGTCTGAAAGATTGAT+GGG | 0.577367 | 3_4:+78495706 | None:intergenic |
CAACCTCCTCTTCTCACCAA+TGG | 0.578750 | 3_4:-78500059 | Msa0524950:CDS |
GAAGATCTCTATTGAACCCA+AGG | 0.579561 | 3_4:+78495663 | None:intergenic |
CAATAGGTGGCTCTTTGAGA+GGG | 0.582620 | 3_4:+78498141 | None:intergenic |
GAGAATTGTGGATCCATCAA+AGG | 0.584083 | 3_4:-78499413 | Msa0524950:CDS |
GTTTGGCCATTGGTGAGAAG+AGG | 0.584350 | 3_4:+78500053 | None:intergenic |
ATCTGCCAGATCAACTTGAA+AGG | 0.584622 | 3_4:-78496752 | Msa0524950:intron |
GTGTTTGCAGTTACAATAGG+TGG | 0.584815 | 3_4:+78498128 | None:intergenic |
GAAATGTTGACTGGAAGGAA+AGG | 0.585668 | 3_4:-78499369 | Msa0524950:CDS |
AGGTGCAATGTGATGATTGG+TGG | 0.585745 | 3_4:-78494557 | Msa0524950:three_prime_UTR |
GAATATAGAAGCAAGGAGAA+CGG | 0.587222 | 3_4:+78494908 | None:intergenic |
TATATTGATCCAAGGCAACC+AGG | 0.590258 | 3_4:-78499525 | Msa0524950:intron |
TGATGGAGAACCATCACAGT+TGG | 0.592603 | 3_4:-78498195 | Msa0524950:CDS |
CCCTTGAATGCCGGACGAGG+TGG | 0.594733 | 3_4:+78495736 | None:intergenic |
CATAACAATCTCGACAAACA+GGG | 0.595414 | 3_4:+78500393 | None:intergenic |
AAATGTTGACTGGAAGGAAA+GGG | 0.595770 | 3_4:-78499368 | Msa0524950:CDS |
AATTTGATAGGTATTGTGGC+TGG | 0.596798 | 3_4:-78495083 | Msa0524950:CDS |
TCAAAGGCAAATGACGAAGA+CGG | 0.596841 | 3_4:-78495176 | Msa0524950:CDS |
AAGAACACAAACACAAACAC+TGG | 0.596999 | 3_4:-78500983 | Msa0524950:five_prime_UTR |
GCCCAGACAATAACAATGGT+TGG | 0.597212 | 3_4:+78494930 | None:intergenic |
GCCTCTCCAGATAAGTCTCA+CGG | 0.598956 | 3_4:+78498333 | None:intergenic |
GATTGATTACTTAAAGGACA+AGG | 0.599814 | 3_4:-78497919 | Msa0524950:CDS |
ATGGCTACAATGGAAGGATG+AGG | 0.601544 | 3_4:-78495615 | Msa0524950:CDS |
TGTTGGGATCAGAGATGAAG+GGG | 0.603228 | 3_4:+78494862 | None:intergenic |
TGTTGACTACCCTGTCGACA+AGG | 0.603351 | 3_4:-78498087 | Msa0524950:CDS |
ACGAGGTGGCATGCAATAGA+CGG | 0.603755 | 3_4:+78495750 | None:intergenic |
TATGGAAGCCTCTTCCGGCA+TGG | 0.605750 | 3_4:-78500787 | Msa0524950:CDS |
ACAAAGAGAATATAGAAGCA+AGG | 0.606102 | 3_4:+78494901 | None:intergenic |
TTGTTGGGATCAGAGATGAA+GGG | 0.606995 | 3_4:+78494861 | None:intergenic |
CATAACCACAACTGATAACG+TGG | 0.607386 | 3_4:+78496165 | None:intergenic |
GGTTCTAGAAAGAAAGGAAA+GGG | 0.607535 | 3_4:-78496599 | Msa0524950:CDS |
GTGGGAGCCAGCAACCATGC+CGG | 0.607689 | 3_4:+78500773 | None:intergenic |
TAATAAGTCAAGGAGACAGT+GGG | 0.609464 | 3_4:-78500126 | Msa0524950:CDS |
TTTGAGAAGCCCTTGAAACA+CGG | 0.610286 | 3_4:+78495235 | None:intergenic |
GCTCAGAAGATGCCAGAGGA+AGG | 0.610967 | 3_4:-78497719 | Msa0524950:CDS |
ACAGATTGATTATCAGGTGT+AGG | 0.612850 | 3_4:+78499600 | None:intergenic |
GAAGGATGAGGCCTCTCATG+AGG | 0.613208 | 3_4:-78495603 | Msa0524950:CDS |
GATGGATCCACAATTCTCAC+CGG | 0.614223 | 3_4:+78499418 | None:intergenic |
AAACAAATTTATTATTCCCG+AGG | 0.615273 | 3_4:-78495494 | Msa0524950:intron |
AATATGGAGGATATAGAGGA+GGG | 0.615452 | 3_4:-78496509 | Msa0524950:CDS |
AGCCGAGTTTGCAAAGATGT+GGG | 0.615569 | 3_4:-78498003 | Msa0524950:CDS |
GCCACCTTGCTCCATGAATG+TGG | 0.615815 | 3_4:+78496232 | None:intergenic |
AGCAACAAACACATCACCGG+TGG | 0.617704 | 3_4:+78500433 | None:intergenic |
TCTAGAAAGAAAGGAAAGGG+TGG | 0.618649 | 3_4:-78496596 | Msa0524950:CDS |
CTAGAAAGAAAGGAAAGGGT+GGG | 0.618776 | 3_4:-78496595 | Msa0524950:CDS |
TGTTCTTAGGACATAGTGGA+GGG | 0.619289 | 3_4:-78497545 | Msa0524950:CDS |
TAATATGGAGGATATAGAGG+AGG | 0.620075 | 3_4:-78496510 | Msa0524950:CDS |
AGAAACCAAGAACTATCAGC+CGG | 0.622521 | 3_4:+78498483 | None:intergenic |
ACCGTGAGACTTATCTGGAG+AGG | 0.622664 | 3_4:-78498334 | Msa0524950:CDS |
AACAGTGGTTACCAATCTTG+GGG | 0.623077 | 3_4:-78495044 | Msa0524950:CDS |
TCGACAGGAGCCAACTGTGA+TGG | 0.623093 | 3_4:+78498185 | None:intergenic |
ATTCAAAAGATATGCACCGT+TGG | 0.623304 | 3_4:+78497080 | None:intergenic |
GCGGAGGAGGAGATATTGAA+GGG | 0.624669 | 3_4:-78499276 | Msa0524950:CDS |
AGTGGAGGGCTTGATACAGA+TGG | 0.624800 | 3_4:-78497531 | Msa0524950:CDS |
TAAGAAACTAACCCCGCTGT+CGG | 0.625109 | 3_4:+78500713 | None:intergenic |
GAATATAGTTAAAGCAAACA+AGG | 0.625898 | 3_4:-78494577 | Msa0524950:three_prime_UTR |
GGGTTCTAGAAAGAAAGGAA+AGG | 0.630688 | 3_4:-78496600 | Msa0524950:CDS |
GTGTTCTTAGGACATAGTGG+AGG | 0.631279 | 3_4:-78497546 | Msa0524950:CDS |
TAACTGAAGTCAACCACAGT+GGG | 0.631451 | 3_4:+78498420 | None:intergenic |
GAAGGCTGGACAATGCAGGA+TGG | 0.631903 | 3_4:-78497701 | Msa0524950:CDS |
GCTTTCTCAGATGGGCCCAA+AGG | 0.632920 | 3_4:+78499561 | None:intergenic |
AGATATGCTGATGGGAAAAG+CGG | 0.635238 | 3_4:-78499295 | Msa0524950:CDS |
GCAATGGGATTGAGGTAAAG+GGG | 0.636175 | 3_4:+78495554 | None:intergenic |
ACAAGCAACAAACACATCAC+CGG | 0.638010 | 3_4:+78500430 | None:intergenic |
CAGGTGTTCTTAGGACATAG+TGG | 0.638632 | 3_4:-78497549 | Msa0524950:CDS |
GGACAAGTCTGTCATATATG+TGG | 0.638984 | 3_4:-78500476 | Msa0524950:CDS |
GCTGCCACATTCATGGAGCA+AGG | 0.639358 | 3_4:-78496236 | Msa0524950:CDS |
ATCAACTTGAAAGGTCAGGA+TGG | 0.639743 | 3_4:-78496743 | Msa0524950:CDS |
AGGCTTCCAACATCACAAGA+AGG | 0.642291 | 3_4:-78497463 | Msa0524950:CDS |
ATGCTCGACAACCTATGAGT+CGG | 0.642320 | 3_4:-78498559 | Msa0524950:CDS |
ATGACTGGTAGATATGCTGA+TGG | 0.642913 | 3_4:-78499304 | Msa0524950:CDS |
TTGTGTAGATATGATCGTGA+TGG | 0.643761 | 3_4:-78498212 | Msa0524950:intron |
GATGTTGGAACAACACCCAC+CGG | 0.644734 | 3_4:-78500449 | Msa0524950:CDS |
CAAGACAGAATGGGGCAAAG+AGG | 0.645256 | 3_4:-78496138 | Msa0524950:intron |
TTTGGGAAATGTTGACTGGA+AGG | 0.645984 | 3_4:-78499374 | Msa0524950:CDS |
TATGAAGACAAGACAGAATG+GGG | 0.646123 | 3_4:-78496146 | Msa0524950:CDS |
GCAATATCGTGTAACTCACC+CGG | 0.646970 | 3_4:-78498456 | Msa0524950:CDS |
ACTAGATACAAAAGGCTCAG+AGG | 0.647746 | 3_4:-78500326 | Msa0524950:intron |
TTGGCCTGGAAATAATCCCA+GGG | 0.648298 | 3_4:-78497672 | Msa0524950:CDS |
AACGAGTTCAATTATCGACA+AGG | 0.650849 | 3_4:-78500161 | Msa0524950:CDS |
CGTCACGATTCTGCCGACAG+CGG | 0.656503 | 3_4:-78500726 | Msa0524950:CDS |
CAATAAGTACTGTTGTAGGA+GGG | 0.656712 | 3_4:+78495108 | None:intergenic |
ATATAAGCCAGCCTCATGAG+AGG | 0.657496 | 3_4:+78495592 | None:intergenic |
ATAATAAGTCAAGGAGACAG+TGG | 0.658283 | 3_4:-78500127 | Msa0524950:CDS |
TATGCTGATGGGAAAAGCGG+AGG | 0.658844 | 3_4:-78499292 | Msa0524950:CDS |
TAATAGCAAAGCTCTTAAGG+AGG | 0.661440 | 3_4:-78497034 | Msa0524950:CDS |
ACCGAAGCACCTGATTGAGA+CGG | 0.666058 | 3_4:+78495689 | None:intergenic |
GGGTTTAAGATGCATGCACG+TGG | 0.666379 | 3_4:-78495781 | Msa0524950:intron |
AACCAGTTCCCACATAGACA+GGG | 0.673506 | 3_4:+78496711 | None:intergenic |
TCATCATCCAATAGTCAGTG+TGG | 0.679111 | 3_4:-78494837 | Msa0524950:CDS |
AAGTACGGTGACAAGAAGAG+GGG | 0.680559 | 3_4:-78496566 | Msa0524950:CDS |
CGACGTATTTGTCAGTACAG+TGG | 0.685009 | 3_4:-78498165 | Msa0524950:CDS |
GTGTTGGTATAGAAGACTGG+TGG | 0.690105 | 3_4:-78495307 | Msa0524950:CDS |
AAAGGCAAATGACGAAGACG+GGG | 0.691426 | 3_4:-78495174 | Msa0524950:CDS |
GCAACAAACACATCACCGGT+GGG | 0.693813 | 3_4:+78500434 | None:intergenic |
TAAAAGATGCTTACCCACTG+TGG | 0.694404 | 3_4:-78498433 | Msa0524950:CDS |
AACGGCCCAGACAATAACAA+TGG | 0.695469 | 3_4:+78494926 | None:intergenic |
GCCACATTCATGGAGCAAGG+TGG | 0.698768 | 3_4:-78496233 | Msa0524950:CDS |
TGACTGGTAGATATGCTGAT+GGG | 0.702596 | 3_4:-78499303 | Msa0524950:CDS |
AATTGAAGTAGTGAAAATGG+AGG | 0.704707 | 3_4:+78495349 | None:intergenic |
ATATAAACAAGAATTCAGCA+TGG | 0.707778 | 3_4:-78494731 | Msa0524950:three_prime_UTR |
AGTCTGTCATATATGTGGTG+AGG | 0.712202 | 3_4:-78500471 | Msa0524950:CDS |
TAAAGCTCAGAAGATGCCAG+AGG | 0.718369 | 3_4:-78497723 | Msa0524950:CDS |
TCACGATTCTGCCGACAGCG+GGG | 0.734794 | 3_4:-78500724 | Msa0524950:intron |
TCAATGCCATCAAATCTCTG+CGG | 0.757536 | 3_4:+78496955 | None:intergenic |
ATAACTGAAGTCAACCACAG+TGG | 0.769108 | 3_4:+78498419 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAATAATAATAAGTCA+AGG | - | chr3_4:78495288-78495307 | Msa0524950:CDS | 10.0% |
!! | TTTCTAAATATGTTTAAATT+TGG | - | chr3_4:78495428-78495447 | Msa0524950:intron | 10.0% |
!! | TTCTAAATATGTTTAAATTT+GGG | - | chr3_4:78495429-78495448 | Msa0524950:intron | 10.0% |
!!! | TTTTTATTTATTAGAAAGAT+AGG | - | chr3_4:78498258-78498277 | Msa0524950:intron | 10.0% |
!!! | AAATATTTTTTTCTTTTGAA+GGG | + | chr3_4:78498602-78498621 | None:intergenic | 10.0% |
!!! | AAAATATTTTTTTCTTTTGA+AGG | + | chr3_4:78498603-78498622 | None:intergenic | 10.0% |
!! | GTTTACTTTAAATATTTACT+TGG | - | chr3_4:78496784-78496803 | Msa0524950:intron | 15.0% |
!!! | AATTTCATTTCAAGTTAAAA+TGG | - | chr3_4:78496811-78496830 | Msa0524950:intron | 15.0% |
!! | ACATGTAGAAATATTAAATA+TGG | - | chr3_4:78497617-78497636 | Msa0524950:intron | 15.0% |
!! | TAAACTGAAAATAACAATAA+TGG | + | chr3_4:78497834-78497853 | None:intergenic | 15.0% |
!!! | AGTTTAGTTATATTATTTTG+TGG | - | chr3_4:78497848-78497867 | Msa0524950:intron | 15.0% |
!! | ATAAAATAAGAAGTTTCAAT+AGG | + | chr3_4:78498013-78498032 | None:intergenic | 15.0% |
!!! | AATATTTTTTTCTTTTGAAG+GGG | + | chr3_4:78498601-78498620 | None:intergenic | 15.0% |
!! | AATTACTAAAACATTAATCT+TGG | + | chr3_4:78500973-78500992 | None:intergenic | 15.0% |
!! | TTAATGCTATAATTCTAATC+TGG | - | chr3_4:78494845-78494864 | Msa0524950:CDS | 20.0% |
!!! | TGAACTTGTTACTTTTTTTT+TGG | - | chr3_4:78495540-78495559 | Msa0524950:CDS | 20.0% |
!! | TATATTTGATATTACAGTTC+CGG | - | chr3_4:78495987-78496006 | Msa0524950:intron | 20.0% |
!!! | AGGCTCAATTTATTTTTATA+TGG | - | chr3_4:78496292-78496311 | Msa0524950:CDS | 20.0% |
!!! | TTTCTCATTATGACTTATTT+TGG | - | chr3_4:78496734-78496753 | Msa0524950:CDS | 20.0% |
!!! | TTCTCATTATGACTTATTTT+GGG | - | chr3_4:78496735-78496754 | Msa0524950:CDS | 20.0% |
!!! | TTCTGAAGAAAATAAAATTC+AGG | + | chr3_4:78497485-78497504 | None:intergenic | 20.0% |
!! | AATAAATATTGAACTGGAAA+TGG | + | chr3_4:78497592-78497611 | None:intergenic | 20.0% |
!! | TCTAGAAATAAATATTGAAC+TGG | + | chr3_4:78497598-78497617 | None:intergenic | 20.0% |
!! | AATATGAAGAATTCAAAGTA+AGG | - | chr3_4:78497661-78497680 | Msa0524950:CDS | 20.0% |
!! | ATATCCTCCATATTAAATAT+GGG | + | chr3_4:78498909-78498928 | None:intergenic | 20.0% |
!! | TATATCCTCCATATTAAATA+TGG | + | chr3_4:78498910-78498929 | None:intergenic | 20.0% |
!!! | CATTTTTTTAGACAAATCTA+AGG | + | chr3_4:78499069-78499088 | None:intergenic | 20.0% |
!!! | AATGATATTACAATGTCTTT+TGG | - | chr3_4:78499085-78499104 | Msa0524950:intron | 20.0% |
!! | GAATAATTTCTTTATACCAA+AGG | + | chr3_4:78499350-78499369 | None:intergenic | 20.0% |
!!! | GTTTAATTTTGATACATTGT+GGG | + | chr3_4:78499520-78499539 | None:intergenic | 20.0% |
!!! | AGTTTAATTTTGATACATTG+TGG | + | chr3_4:78499521-78499540 | None:intergenic | 20.0% |
!!! | TAAACAAATTTTACATTACG+TGG | + | chr3_4:78500821-78500840 | None:intergenic | 20.0% |
!! | TTGATCTTCAACTTTTTATC+AGG | - | chr3_4:78494812-78494831 | Msa0524950:exon | 25.0% |
! | TTCAAATTCTTCAATGGTTT+CGG | + | chr3_4:78494927-78494946 | None:intergenic | 25.0% |
! | AAACCATTGAAGAATTTGAA+TGG | - | chr3_4:78494927-78494946 | Msa0524950:CDS | 25.0% |
! | AATGCAAAACTAGATACAAA+AGG | - | chr3_4:78495090-78495109 | Msa0524950:CDS | 25.0% |
!!! | GGTTAGTTAATTAGTTTGTT+AGG | - | chr3_4:78495119-78495138 | Msa0524950:CDS | 25.0% |
! | TTGAATTGAAATCATGAATC+TGG | - | chr3_4:78495182-78495201 | Msa0524950:CDS | 25.0% |
! | TATTCTTGATATTCTTGAGA+TGG | - | chr3_4:78495486-78495505 | Msa0524950:intron | 25.0% |
!!! | TTCATCTTAACACTTTTTGA+CGG | + | chr3_4:78495524-78495543 | None:intergenic | 25.0% |
! | ACATTGCATTATATATGCAA+GGG | + | chr3_4:78495637-78495656 | None:intergenic | 25.0% |
! | AACATTGCATTATATATGCA+AGG | + | chr3_4:78495638-78495657 | None:intergenic | 25.0% |
!!! | ATGTATTTCATGTTTTTTGC+AGG | - | chr3_4:78495709-78495728 | Msa0524950:CDS | 25.0% |
! | TAATAAGATCAGATTGAGAA+TGG | - | chr3_4:78496433-78496452 | Msa0524950:intron | 25.0% |
! | AATAAGATCAGATTGAGAAT+GGG | - | chr3_4:78496434-78496453 | Msa0524950:intron | 25.0% |
! | TAGTGAAGATGTTAATGTTA+TGG | - | chr3_4:78496587-78496606 | Msa0524950:CDS | 25.0% |
!!! | TTTTTTTTTTGGTGGACTTT+TGG | - | chr3_4:78496669-78496688 | Msa0524950:CDS | 25.0% |
! | TGAGAAACATACATAACATT+AGG | + | chr3_4:78496721-78496740 | None:intergenic | 25.0% |
!!! | ATACTGTGTTTTTTGCAAAA+GGG | + | chr3_4:78497449-78497468 | None:intergenic | 25.0% |
!!! | AATACTGTGTTTTTTGCAAA+AGG | + | chr3_4:78497450-78497469 | None:intergenic | 25.0% |
! | TCAGAAGATTGATTACTTAA+AGG | - | chr3_4:78497499-78497518 | Msa0524950:CDS | 25.0% |
! | ACTGAAAATAACAATAATGG+TGG | + | chr3_4:78497831-78497850 | None:intergenic | 25.0% |
!!! | TATATTATTTTGTGGTATGC+AGG | - | chr3_4:78497856-78497875 | Msa0524950:intron | 25.0% |
!!! | TTCTTATTTTATGTGTTCCA+TGG | - | chr3_4:78498021-78498040 | Msa0524950:CDS | 25.0% |
!!! | CTGGTTTATTTTCCTTTTAA+TGG | - | chr3_4:78498050-78498069 | Msa0524950:CDS | 25.0% |
! | AATGAGAACAATACAAAACA+CGG | + | chr3_4:78498083-78498102 | None:intergenic | 25.0% |
! | AATCAACACAGTACAATTAT+AGG | - | chr3_4:78498162-78498181 | Msa0524950:CDS | 25.0% |
!!! | CAAATTTCTAAAGCTTCTTT+AGG | - | chr3_4:78498195-78498214 | Msa0524950:CDS | 25.0% |
! | CAACTCTTAACAATAATGTT+AGG | + | chr3_4:78498801-78498820 | None:intergenic | 25.0% |
! | ACATTATTGTTAAGAGTTGT+TGG | - | chr3_4:78498802-78498821 | Msa0524950:intron | 25.0% |
! | CATTATTGTTAAGAGTTGTT+GGG | - | chr3_4:78498803-78498822 | Msa0524950:intron | 25.0% |
! | ATTATTGTTAAGAGTTGTTG+GGG | - | chr3_4:78498804-78498823 | Msa0524950:intron | 25.0% |
! | ATTTAATATGGAGGATATAG+AGG | - | chr3_4:78498911-78498930 | Msa0524950:intron | 25.0% |
!! | TCATTTAACTCCCTTATTTA+CGG | - | chr3_4:78498969-78498988 | Msa0524950:intron | 25.0% |
! | ACATGAAAAACCGTAAATAA+GGG | + | chr3_4:78498982-78499001 | None:intergenic | 25.0% |
!!! | TGATGATTTTGATTGATTGA+CGG | + | chr3_4:78499407-78499426 | None:intergenic | 25.0% |
! | AAACAAATTTATTATTCCCG+AGG | - | chr3_4:78499930-78499949 | Msa0524950:intron | 25.0% |
!! | AAATTTTACCGTTACATCAA+AGG | - | chr3_4:78500232-78500251 | Msa0524950:intron | 25.0% |
! | GTACTTATTGTGAATTTGAT+AGG | - | chr3_4:78500329-78500348 | Msa0524950:CDS | 25.0% |
!! | TTCTATATTCTCTTTGTTGT+GGG | - | chr3_4:78500529-78500548 | Msa0524950:intron | 25.0% |
! | TTGATGTCTCTAAATCAAAA+AGG | + | chr3_4:78500659-78500678 | None:intergenic | 25.0% |
!!! | TTTTTGATTTAGAGACATCA+AGG | - | chr3_4:78500658-78500677 | Msa0524950:intron | 25.0% |
! | ATATAAACAAGAATTCAGCA+TGG | - | chr3_4:78500693-78500712 | Msa0524950:intron | 25.0% |
!!! | CCTATTTTTCATGCATTAAT+AGG | + | chr3_4:78500726-78500745 | None:intergenic | 25.0% |
! | CCTATTAATGCATGAAAAAT+AGG | - | chr3_4:78500723-78500742 | Msa0524950:intron | 25.0% |
! | TTAATGCATGAAAAATAGGA+CGG | - | chr3_4:78500727-78500746 | Msa0524950:CDS | 25.0% |
! | GAATATAGTTAAAGCAAACA+AGG | - | chr3_4:78500847-78500866 | Msa0524950:five_prime_UTR | 25.0% |
!! | GTGTTTTTGTGAAATGAGAT+AGG | - | chr3_4:78494496-78494515 | Msa0524950:three_prime_UTR | 30.0% |
AAAAATATTGCGTGTTGAGT+GGG | - | chr3_4:78494527-78494546 | Msa0524950:three_prime_UTR | 30.0% | |
TTACAACTTTAGATCAGATC+TGG | - | chr3_4:78494767-78494786 | Msa0524950:three_prime_UTR | 30.0% | |
TGTCCATTCAAATTCTTCAA+TGG | + | chr3_4:78494933-78494952 | None:intergenic | 30.0% | |
! | TTTGTTGCTTGTAATGAATG+TGG | - | chr3_4:78495005-78495024 | Msa0524950:CDS | 30.0% |
TATGAATATGAGCGAAAAGA+AGG | - | chr3_4:78495050-78495069 | Msa0524950:CDS | 30.0% | |
!!! | TTGTATCTAGTTTTGCATTG+AGG | + | chr3_4:78495089-78495108 | None:intergenic | 30.0% |
AGAATCAAAGGATTACAGTT+TGG | + | chr3_4:78495391-78495410 | None:intergenic | 30.0% | |
AAACAGTTGGATAGAATCAA+AGG | + | chr3_4:78495403-78495422 | None:intergenic | 30.0% | |
! | TGATTCTATCCAACTGTTTT+AGG | - | chr3_4:78495404-78495423 | Msa0524950:intron | 30.0% |
TTTAGAAAGCCTAAAACAGT+TGG | + | chr3_4:78495416-78495435 | None:intergenic | 30.0% | |
!! | AATTAGTATTGACAGATGTC+TGG | - | chr3_4:78495794-78495813 | Msa0524950:intron | 30.0% |
TATGAGTTTAAGTCCTTTGA+TGG | + | chr3_4:78496027-78496046 | None:intergenic | 30.0% | |
TCAAAGGACTTAAACTCATA+TGG | - | chr3_4:78496027-78496046 | Msa0524950:intron | 30.0% | |
GACTTAAACTCATATGGTTT+GGG | - | chr3_4:78496033-78496052 | Msa0524950:intron | 30.0% | |
AAAAATATGGTACAGATGAC+TGG | - | chr3_4:78496105-78496124 | Msa0524950:intron | 30.0% | |
ATCAAACCAAACAGAATAAG+TGG | + | chr3_4:78496208-78496227 | None:intergenic | 30.0% | |
TCATTGTTTGTTTATGCTAG+AGG | - | chr3_4:78496272-78496291 | Msa0524950:CDS | 30.0% | |
! | AATTTTCATTCTCCTTCTCA+TGG | - | chr3_4:78496329-78496348 | Msa0524950:intron | 30.0% |
GATCAATACACTCTATTGTT+TGG | + | chr3_4:78496371-78496390 | None:intergenic | 30.0% | |
AATGGGATTGTTTAACCAAA+AGG | - | chr3_4:78496451-78496470 | Msa0524950:intron | 30.0% | |
ATGGGATTGTTTAACCAAAA+GGG | - | chr3_4:78496452-78496471 | Msa0524950:intron | 30.0% | |
!!! | TAACCAAAAGGGACATTTTT+TGG | - | chr3_4:78496463-78496482 | Msa0524950:intron | 30.0% |
!!! | AACCAAAAGGGACATTTTTT+GGG | - | chr3_4:78496464-78496483 | Msa0524950:intron | 30.0% |
GATCATCTATTTGCATATTG+AGG | - | chr3_4:78496504-78496523 | Msa0524950:CDS | 30.0% | |
TGAAGATGTTAATGTTATGG+AGG | - | chr3_4:78496590-78496609 | Msa0524950:CDS | 30.0% | |
CTGTCAAAAACAGAAACAAA+GGG | + | chr3_4:78496837-78496856 | None:intergenic | 30.0% | |
!!! | CTTTGTTTCTGTTTTTGACA+GGG | - | chr3_4:78496836-78496855 | Msa0524950:intron | 30.0% |
! | TTTTGGATCAGTTTCCAAAA+TGG | - | chr3_4:78497057-78497076 | Msa0524950:CDS | 30.0% |
ACAAGACAAACTAAGATTAG+TGG | + | chr3_4:78497196-78497215 | None:intergenic | 30.0% | |
AAATAAAATTCAGGTGCTCT+TGG | + | chr3_4:78497476-78497495 | None:intergenic | 30.0% | |
GATTGATTACTTAAAGGACA+AGG | - | chr3_4:78497505-78497524 | Msa0524950:CDS | 30.0% | |
GAAAATAACAATAATGGTGG+AGG | + | chr3_4:78497828-78497847 | None:intergenic | 30.0% | |
ATGAGAACAATACAAAACAC+GGG | + | chr3_4:78498082-78498101 | None:intergenic | 30.0% | |
ATGAAAAATAACCTGCTAAG+TGG | - | chr3_4:78498132-78498151 | Msa0524950:CDS | 30.0% | |
CAATAATAGCAAAGCTCTTA+AGG | - | chr3_4:78498387-78498406 | Msa0524950:CDS | 30.0% | |
AATATTGTCTTCTTCGATGT+AGG | - | chr3_4:78498517-78498536 | Msa0524950:CDS | 30.0% | |
CATATTAAATATGGGAATGG+TGG | + | chr3_4:78498901-78498920 | None:intergenic | 30.0% | |
CACCATTCCCATATTTAATA+TGG | - | chr3_4:78498899-78498918 | Msa0524950:intron | 30.0% | |
CTCCATATTAAATATGGGAA+TGG | + | chr3_4:78498904-78498923 | None:intergenic | 30.0% | |
CATTCCCATATTTAATATGG+AGG | - | chr3_4:78498902-78498921 | Msa0524950:intron | 30.0% | |
CACATGAAAAACCGTAAATA+AGG | + | chr3_4:78498983-78499002 | None:intergenic | 30.0% | |
! | ATATTACAATGTCTTTTGGC+AGG | - | chr3_4:78499089-78499108 | Msa0524950:intron | 30.0% |
CTTAAGAAGAGTTGTAGAAT+TGG | + | chr3_4:78499231-78499250 | None:intergenic | 30.0% | |
CAATTCTACAACTCTTCTTA+AGG | - | chr3_4:78499229-78499248 | Msa0524950:intron | 30.0% | |
TTATGAAGACAAGACAGAAT+GGG | - | chr3_4:78499277-78499296 | Msa0524950:CDS | 30.0% | |
!!! | GTTTTTTAATTCTCGTCCTT+TGG | - | chr3_4:78499331-78499350 | Msa0524950:CDS | 30.0% |
!! | TTCTAAAGTCTCCTAGATAT+TGG | - | chr3_4:78499462-78499481 | Msa0524950:intron | 30.0% |
AGAGAACAAATCATTTACCT+CGG | + | chr3_4:78499950-78499969 | None:intergenic | 30.0% | |
!! | ATGATTTGTTCTCTCATTTC+TGG | - | chr3_4:78499956-78499975 | Msa0524950:intron | 30.0% |
!! | AACCTTATAACTACTGATTC+TGG | - | chr3_4:78499984-78500003 | Msa0524950:intron | 30.0% |
ATCCAGAATCAGTAGTTATA+AGG | + | chr3_4:78499989-78500008 | None:intergenic | 30.0% | |
AATTGAAGTAGTGAAAATGG+AGG | + | chr3_4:78500078-78500097 | None:intergenic | 30.0% | |
CAGAATTGAAGTAGTGAAAA+TGG | + | chr3_4:78500081-78500100 | None:intergenic | 30.0% | |
! | CATTTTCACTACTTCAATTC+TGG | - | chr3_4:78500079-78500098 | Msa0524950:CDS | 30.0% |
! | TTCACAATAAGTACTGTTGT+AGG | + | chr3_4:78500323-78500342 | None:intergenic | 30.0% |
! | TGTGAATTTGATAGGTATTG+TGG | - | chr3_4:78500337-78500356 | Msa0524950:CDS | 30.0% |
! | AAAGCTCTTCTTTGCTATAT+GGG | - | chr3_4:78500415-78500434 | Msa0524950:CDS | 30.0% |
TCATTTATACCCTTTCTTGA+AGG | - | chr3_4:78500445-78500464 | Msa0524950:CDS | 30.0% | |
CATTTATACCCTTTCTTGAA+GGG | - | chr3_4:78500446-78500465 | Msa0524950:CDS | 30.0% | |
ACAAAGAGAATATAGAAGCA+AGG | + | chr3_4:78500526-78500545 | None:intergenic | 30.0% | |
CTTCTATATTCTCTTTGTTG+TGG | - | chr3_4:78500528-78500547 | Msa0524950:intron | 30.0% | |
!! | CTATTGGATGATGATTTGTT+GGG | + | chr3_4:78500581-78500600 | None:intergenic | 30.0% |
! | ACTATTGGATGATGATTTGT+TGG | + | chr3_4:78500582-78500601 | None:intergenic | 30.0% |
TAATGCATGAAAAATAGGAC+GGG | - | chr3_4:78500728-78500747 | Msa0524950:CDS | 30.0% | |
AAGAACACAAACACAAACAC+TGG | - | chr3_4:78494441-78494460 | Msa0524950:three_prime_UTR | 35.0% | |
GAAAAATATTGCGTGTTGAG+TGG | - | chr3_4:78494526-78494545 | Msa0524950:three_prime_UTR | 35.0% | |
AACTTTAGATCAGATCTGGT+TGG | - | chr3_4:78494771-78494790 | Msa0524950:three_prime_UTR | 35.0% | |
CATAACAATCTCGACAAACA+GGG | + | chr3_4:78495034-78495053 | None:intergenic | 35.0% | |
TCATAACAATCTCGACAAAC+AGG | + | chr3_4:78495035-78495054 | None:intergenic | 35.0% | |
TGAAATCATGAATCTGGATC+AGG | - | chr3_4:78495188-78495207 | Msa0524950:CDS | 35.0% | |
GAAATCATGAATCTGGATCA+GGG | - | chr3_4:78495189-78495208 | Msa0524950:CDS | 35.0% | |
AACGAGTTCAATTATCGACA+AGG | - | chr3_4:78495263-78495282 | Msa0524950:CDS | 35.0% | |
ATAATAAGTCAAGGAGACAG+TGG | - | chr3_4:78495297-78495316 | Msa0524950:CDS | 35.0% | |
TAATAAGTCAAGGAGACAGT+GGG | - | chr3_4:78495298-78495317 | Msa0524950:CDS | 35.0% | |
AGCTAGAAATTCACCTCTTA+AGG | - | chr3_4:78495577-78495596 | Msa0524950:CDS | 35.0% | |
CATTATATATGCAAGGGTTG+GGG | + | chr3_4:78495631-78495650 | None:intergenic | 35.0% | |
GCATTATATATGCAAGGGTT+GGG | + | chr3_4:78495632-78495651 | None:intergenic | 35.0% | |
TGCATTATATATGCAAGGGT+TGG | + | chr3_4:78495633-78495652 | None:intergenic | 35.0% | |
ACAGATTGATTATCAGGTGT+AGG | + | chr3_4:78495827-78495846 | None:intergenic | 35.0% | |
! | ATTCAAGTTAGCACTATACC+TGG | + | chr3_4:78495920-78495939 | None:intergenic | 35.0% |
GGACTTAAACTCATATGGTT+TGG | - | chr3_4:78496032-78496051 | Msa0524950:intron | 35.0% | |
! | AAATGTTGACTGGAAGGAAA+GGG | - | chr3_4:78496056-78496075 | Msa0524950:intron | 35.0% |
TGTAAGCCACTTATTCTGTT+TGG | - | chr3_4:78496199-78496218 | Msa0524950:CDS | 35.0% | |
ACTAGCTAATCATATGTGTG+AGG | - | chr3_4:78496236-78496255 | Msa0524950:CDS | 35.0% | |
! | AATCATATGTGTGAGGTATC+AGG | - | chr3_4:78496243-78496262 | Msa0524950:CDS | 35.0% |
! | ATCATATGTGTGAGGTATCA+GGG | - | chr3_4:78496244-78496263 | Msa0524950:CDS | 35.0% |
CATCTATTTGCATATTGAGG+TGG | - | chr3_4:78496507-78496526 | Msa0524950:CDS | 35.0% | |
ATTATCCCAATTGGCAAGTT+AGG | - | chr3_4:78496616-78496635 | Msa0524950:CDS | 35.0% | |
TTATCCCAATTGGCAAGTTA+GGG | - | chr3_4:78496617-78496636 | Msa0524950:CDS | 35.0% | |
! | AAATCCCTAACTTGCCAATT+GGG | + | chr3_4:78496624-78496643 | None:intergenic | 35.0% |
! | AAAATCCCTAACTTGCCAAT+TGG | + | chr3_4:78496625-78496644 | None:intergenic | 35.0% |
!! | AGGGATTTTATCTAGAGTGT+AGG | - | chr3_4:78496636-78496655 | Msa0524950:CDS | 35.0% |
!! | TTTTATCTAGAGTGTAGGCT+TGG | - | chr3_4:78496641-78496660 | Msa0524950:CDS | 35.0% |
! | TTTATCTAGAGTGTAGGCTT+GGG | - | chr3_4:78496642-78496661 | Msa0524950:CDS | 35.0% |
!!! | GCTTGGGGGTTTTTTTTTTT+TGG | - | chr3_4:78496658-78496677 | Msa0524950:CDS | 35.0% |
!!! | TGGGGGTTTTTTTTTTTTGG+TGG | - | chr3_4:78496661-78496680 | Msa0524950:CDS | 35.0% |
CCTGTCAAAAACAGAAACAA+AGG | + | chr3_4:78496838-78496857 | None:intergenic | 35.0% | |
!!! | CCTTTGTTTCTGTTTTTGAC+AGG | - | chr3_4:78496835-78496854 | Msa0524950:intron | 35.0% |
CTTCAGTTATCTGTGAGATT+TGG | - | chr3_4:78497018-78497037 | Msa0524950:CDS | 35.0% | |
!!! | AGATTTGGTTTGCATTTTCC+TGG | - | chr3_4:78497033-78497052 | Msa0524950:CDS | 35.0% |
! | GTTTGCATTTTCCTGGATTT+TGG | - | chr3_4:78497040-78497059 | Msa0524950:CDS | 35.0% |
AGATAAGTCTCACGGTTAAT+GGG | + | chr3_4:78497086-78497105 | None:intergenic | 35.0% | |
ACATAGCAATCCAAACCTTA+TGG | + | chr3_4:78497120-78497139 | None:intergenic | 35.0% | |
TTGTGTAGATATGATCGTGA+TGG | - | chr3_4:78497212-78497231 | Msa0524950:intron | 35.0% | |
ACAGTGTTTGCAGTTACAAT+AGG | + | chr3_4:78497302-78497321 | None:intergenic | 35.0% | |
! | TCTTGCTATGTATCTGATGA+TGG | - | chr3_4:78497362-78497381 | Msa0524950:intron | 35.0% |
GTTTCGAACATATCTAACCT+TGG | - | chr3_4:78498280-78498299 | Msa0524950:intron | 35.0% | |
ACATCACACAAGATAAACCA+AGG | + | chr3_4:78498300-78498319 | None:intergenic | 35.0% | |
ATTCAAAAGATATGCACCGT+TGG | + | chr3_4:78498347-78498366 | None:intergenic | 35.0% | |
TAATAGCAAAGCTCTTAAGG+AGG | - | chr3_4:78498390-78498409 | Msa0524950:CDS | 35.0% | |
GAAGAAGACAATATTGCGAT+TGG | + | chr3_4:78498512-78498531 | None:intergenic | 35.0% | |
! | TTCAATAGGCAAGCTTTGTA+TGG | - | chr3_4:78498741-78498760 | Msa0524950:intron | 35.0% |
!!! | TTATGATCCTGTTTTGACTG+AGG | - | chr3_4:78498764-78498783 | Msa0524950:intron | 35.0% |
!! | GGTTCTAGAAAGAAAGGAAA+GGG | - | chr3_4:78498825-78498844 | Msa0524950:intron | 35.0% |
TAATATGGAGGATATAGAGG+AGG | - | chr3_4:78498914-78498933 | Msa0524950:intron | 35.0% | |
AATATGGAGGATATAGAGGA+GGG | - | chr3_4:78498915-78498934 | Msa0524950:intron | 35.0% | |
GAAAATTGTTTGCAGTAACC+TGG | - | chr3_4:78499033-78499052 | Msa0524950:intron | 35.0% | |
ATCTAAGGATATCTACAACC+AGG | + | chr3_4:78499054-78499073 | None:intergenic | 35.0% | |
AATGTGGCAGCAATAAAAAC+CGG | + | chr3_4:78499179-78499198 | None:intergenic | 35.0% | |
! | TTTTATTGCTGCCACATTCA+TGG | - | chr3_4:78499181-78499200 | Msa0524950:intron | 35.0% |
AGAGTTGTAGAATTGGTTGA+AGG | + | chr3_4:78499224-78499243 | None:intergenic | 35.0% | |
GTTATGAAGACAAGACAGAA+TGG | - | chr3_4:78499276-78499295 | Msa0524950:CDS | 35.0% | |
TATGAAGACAAGACAGAATG+GGG | - | chr3_4:78499278-78499297 | Msa0524950:CDS | 35.0% | |
GCAAATCAGAACCAATATCT+AGG | + | chr3_4:78499476-78499495 | None:intergenic | 35.0% | |
TTTGTGAGAAGACAAAATGC+AGG | + | chr3_4:78499913-78499932 | None:intergenic | 35.0% | |
GAGAACAAATCATTTACCTC+GGG | + | chr3_4:78499949-78499968 | None:intergenic | 35.0% | |
TAAGTAACTTTGCTAGCATG+TGG | - | chr3_4:78500036-78500055 | Msa0524950:intron | 35.0% | |
TAGTGAAAATGGAGGTAAAG+AGG | + | chr3_4:78500070-78500089 | None:intergenic | 35.0% | |
GTCATTTGCCTTTGATGTAA+CGG | + | chr3_4:78500243-78500262 | None:intergenic | 35.0% | |
! | CAATAAGTACTGTTGTAGGA+GGG | + | chr3_4:78500319-78500338 | None:intergenic | 35.0% |
! | ACAATAAGTACTGTTGTAGG+AGG | + | chr3_4:78500320-78500339 | None:intergenic | 35.0% |
! | AATTTGATAGGTATTGTGGC+TGG | - | chr3_4:78500341-78500360 | Msa0524950:CDS | 35.0% |
! | AGATTGGTAACCACTGTTTA+TGG | + | chr3_4:78500378-78500397 | None:intergenic | 35.0% |
TAAACAGTGGTTACCAATCT+TGG | - | chr3_4:78500378-78500397 | Msa0524950:CDS | 35.0% | |
AAACAGTGGTTACCAATCTT+GGG | - | chr3_4:78500379-78500398 | Msa0524950:CDS | 35.0% | |
AAGAAGAGCTTTCCAAATAG+TGG | + | chr3_4:78500407-78500426 | None:intergenic | 35.0% | |
! | GAAAGCTCTTCTTTGCTATA+TGG | - | chr3_4:78500414-78500433 | Msa0524950:CDS | 35.0% |
! | ACCAACCATTGTTATTGTCT+GGG | - | chr3_4:78500493-78500512 | Msa0524950:CDS | 35.0% |
GAATATAGAAGCAAGGAGAA+CGG | + | chr3_4:78500519-78500538 | None:intergenic | 35.0% | |
AATGCATGAAAAATAGGACG+GGG | - | chr3_4:78500729-78500748 | Msa0524950:CDS | 35.0% | |
TAGAAACAAGAATGCTATGC+AGG | + | chr3_4:78500768-78500787 | None:intergenic | 35.0% | |
! | TTTTCTATTGTGAGCTAGTG+TGG | - | chr3_4:78500892-78500911 | Msa0524950:five_prime_UTR | 35.0% |
CATCACTCTCTGTCACAATA+TGG | - | chr3_4:78494619-78494638 | Msa0524950:three_prime_UTR | 40.0% | |
AACAAGCTCGTTACGATTGT+GGG | + | chr3_4:78494672-78494691 | None:intergenic | 40.0% | |
GGACAAGTCTGTCATATATG+TGG | - | chr3_4:78494948-78494967 | Msa0524950:CDS | 40.0% | |
AGTCTGTCATATATGTGGTG+AGG | - | chr3_4:78494953-78494972 | Msa0524950:CDS | 40.0% | |
CATATATGTGGTGAGGATGT+TGG | - | chr3_4:78494960-78494979 | Msa0524950:CDS | 40.0% | |
ACAAGCAACAAACACATCAC+CGG | + | chr3_4:78494997-78495016 | None:intergenic | 40.0% | |
ACTAGATACAAAAGGCTCAG+AGG | - | chr3_4:78495098-78495117 | Msa0524950:CDS | 40.0% | |
AAGGATTACAGTTTGGCCAT+TGG | + | chr3_4:78495384-78495403 | None:intergenic | 40.0% | |
!! | GAGGTGAATTTCTAGCTACT+AGG | + | chr3_4:78495574-78495593 | None:intergenic | 40.0% |
ACCTCTTAAGGTGAATAAGC+AGG | - | chr3_4:78495589-78495608 | Msa0524950:CDS | 40.0% | |
CCTCTTAAGGTGAATAAGCA+GGG | - | chr3_4:78495590-78495609 | Msa0524950:CDS | 40.0% | |
GCTAAGCTCACAAGGAAATA+TGG | - | chr3_4:78495670-78495689 | Msa0524950:CDS | 40.0% | |
GTTCGGACAGATTGATTATC+AGG | + | chr3_4:78495833-78495852 | None:intergenic | 40.0% | |
CACTTCCCTATATTGATCCA+AGG | - | chr3_4:78495891-78495910 | Msa0524950:intron | 40.0% | |
GGTTGCCTTGGATCAATATA+GGG | + | chr3_4:78495899-78495918 | None:intergenic | 40.0% | |
TGGTTGCCTTGGATCAATAT+AGG | + | chr3_4:78495900-78495919 | None:intergenic | 40.0% | |
TATATTGATCCAAGGCAACC+AGG | - | chr3_4:78495899-78495918 | Msa0524950:intron | 40.0% | |
GAGAATTGTGGATCCATCAA+AGG | - | chr3_4:78496011-78496030 | Msa0524950:intron | 40.0% | |
! | ATGGTTTGGGAAATGTTGAC+TGG | - | chr3_4:78496046-78496065 | Msa0524950:intron | 40.0% |
! | TTTGGGAAATGTTGACTGGA+AGG | - | chr3_4:78496050-78496069 | Msa0524950:intron | 40.0% |
! | GAAATGTTGACTGGAAGGAA+AGG | - | chr3_4:78496055-78496074 | Msa0524950:intron | 40.0% |
GCTGAAGCACGAGAAAAATA+TGG | - | chr3_4:78496092-78496111 | Msa0524950:intron | 40.0% | |
ATGACTGGTAGATATGCTGA+TGG | - | chr3_4:78496120-78496139 | Msa0524950:intron | 40.0% | |
TGACTGGTAGATATGCTGAT+GGG | - | chr3_4:78496121-78496140 | Msa0524950:intron | 40.0% | |
AGATATGCTGATGGGAAAAG+CGG | - | chr3_4:78496129-78496148 | Msa0524950:intron | 40.0% | |
!! | ATTGAAGGGACTGGTTCTAA+TGG | - | chr3_4:78496162-78496181 | Msa0524950:CDS | 40.0% |
CTTGTTACCTCTTCAAGAGT+TGG | - | chr3_4:78496390-78496409 | Msa0524950:intron | 40.0% | |
ATGTGATCCAACTCTTGAAG+AGG | + | chr3_4:78496400-78496419 | None:intergenic | 40.0% | |
! | GACCCAAAAAATGTCCCTTT+TGG | + | chr3_4:78496469-78496488 | None:intergenic | 40.0% |
TTGCATATTGAGGTGGTAGT+AGG | - | chr3_4:78496514-78496533 | Msa0524950:CDS | 40.0% | |
TGCATATTGAGGTGGTAGTA+GGG | - | chr3_4:78496515-78496534 | Msa0524950:CDS | 40.0% | |
CAACTTTCTCCATCATCTAC+AGG | + | chr3_4:78496555-78496574 | None:intergenic | 40.0% | |
!! | CTGTAGATGATGGAGAAAGT+TGG | - | chr3_4:78496553-78496572 | Msa0524950:CDS | 40.0% |
!! | AGATGATGGAGAAAGTTGGA+TGG | - | chr3_4:78496557-78496576 | Msa0524950:CDS | 40.0% |
! | TGGAGGTTGATTATCCCAAT+TGG | - | chr3_4:78496607-78496626 | Msa0524950:CDS | 40.0% |
! | TTATCTAGAGTGTAGGCTTG+GGG | - | chr3_4:78496643-78496662 | Msa0524950:CDS | 40.0% |
GTCAGCTGAGATGAAGAAAT+GGG | + | chr3_4:78496897-78496916 | None:intergenic | 40.0% | |
ACACGATGACAACACGATAA+GGG | + | chr3_4:78496920-78496939 | None:intergenic | 40.0% | |
AACACGATGACAACACGATA+AGG | + | chr3_4:78496921-78496940 | None:intergenic | 40.0% | |
AGAAACCAAGAACTATCAGC+CGG | + | chr3_4:78496944-78496963 | None:intergenic | 40.0% | |
! | AGTGGGTAAGCATCTTTTAC+CGG | + | chr3_4:78496990-78497009 | None:intergenic | 40.0% |
TAAAAGATGCTTACCCACTG+TGG | - | chr3_4:78496991-78497010 | Msa0524950:CDS | 40.0% | |
TAACTGAAGTCAACCACAGT+GGG | + | chr3_4:78497007-78497026 | None:intergenic | 40.0% | |
ATAACTGAAGTCAACCACAG+TGG | + | chr3_4:78497008-78497027 | None:intergenic | 40.0% | |
TGGAAACTGATCCAAAATCC+AGG | + | chr3_4:78497054-78497073 | None:intergenic | 40.0% | |
CAGATAAGTCTCACGGTTAA+TGG | + | chr3_4:78497087-78497106 | None:intergenic | 40.0% | |
CATTAACCGTGAGACTTATC+TGG | - | chr3_4:78497085-78497104 | Msa0524950:CDS | 40.0% | |
TGCTATGTTTCCTTCACTGT+TGG | - | chr3_4:78497132-78497151 | Msa0524950:intron | 40.0% | |
GAACAGAAAATGTCGCATCA+TGG | + | chr3_4:78497174-78497193 | None:intergenic | 40.0% | |
GTGTTTGCAGTTACAATAGG+TGG | + | chr3_4:78497299-78497318 | None:intergenic | 40.0% | |
! | AAACTCGGCTGTTTCAGATA+AGG | + | chr3_4:78497411-78497430 | None:intergenic | 40.0% |
! | GGTTCAACCCTCTTTTGTTA+AGG | - | chr3_4:78497526-78497545 | Msa0524950:CDS | 40.0% |
! | CTTCTGAGCTTTAGCAACAT+AGG | + | chr3_4:78497694-78497713 | None:intergenic | 40.0% |
CGTAATACCTGAATCATTCC+AGG | + | chr3_4:78497783-78497802 | None:intergenic | 40.0% | |
! | TGTTCTTAGGACATAGTGGA+GGG | - | chr3_4:78497879-78497898 | Msa0524950:intron | 40.0% |
AAATAAACCAGACAACGCCA+TGG | + | chr3_4:78498041-78498060 | None:intergenic | 40.0% | |
TGTGCTAATCGATCAAACGA+TGG | - | chr3_4:78498229-78498248 | Msa0524950:intron | 40.0% | |
!! | TTCATGATGGATCCTGCTTA+TGG | - | chr3_4:78498421-78498440 | Msa0524950:CDS | 40.0% |
CATGTCTTCTTTCCATAAGC+AGG | + | chr3_4:78498436-78498455 | None:intergenic | 40.0% | |
CAATTTCCGCAGAGATTTGA+TGG | - | chr3_4:78498463-78498482 | Msa0524950:CDS | 40.0% | |
TCAATGCCATCAAATCTCTG+CGG | + | chr3_4:78498472-78498491 | None:intergenic | 40.0% | |
TCAAGTTTAGCGAAAGCAGT+TGG | + | chr3_4:78498644-78498663 | None:intergenic | 40.0% | |
ATCTGCCAGATCAACTTGAA+AGG | - | chr3_4:78498672-78498691 | Msa0524950:intron | 40.0% | |
ATCAACTTGAAAGGTCAGGA+TGG | - | chr3_4:78498681-78498700 | Msa0524950:intron | 40.0% | |
AAAGGTCAGGATGGTATTCA+GGG | - | chr3_4:78498690-78498709 | Msa0524950:intron | 40.0% | |
!! | GAACTGGTTGCTGTTTCAAT+AGG | - | chr3_4:78498727-78498746 | Msa0524950:intron | 40.0% |
AGATCTTCCTCAGTCAAAAC+AGG | + | chr3_4:78498774-78498793 | None:intergenic | 40.0% | |
!! | TGTTGGGGTTCTAGAAAGAA+AGG | - | chr3_4:78498819-78498838 | Msa0524950:intron | 40.0% |
!! | GGGTTCTAGAAAGAAAGGAA+AGG | - | chr3_4:78498824-78498843 | Msa0524950:intron | 40.0% |
TCTAGAAAGAAAGGAAAGGG+TGG | - | chr3_4:78498828-78498847 | Msa0524950:intron | 40.0% | |
CTAGAAAGAAAGGAAAGGGT+GGG | - | chr3_4:78498829-78498848 | Msa0524950:intron | 40.0% | |
AAGGGTGGGAATAAGAAGTA+CGG | - | chr3_4:78498843-78498862 | Msa0524950:intron | 40.0% | |
! | TGGCAGGTTATGATGATGAA+AGG | - | chr3_4:78499105-78499124 | Msa0524950:intron | 40.0% |
TCTAATGTCTCAGAAGAGCT+TGG | - | chr3_4:78499133-78499152 | Msa0524950:intron | 40.0% | |
TAGAATTGGTTGAAGGTGGA+AGG | + | chr3_4:78499217-78499236 | None:intergenic | 40.0% | |
GTTGTAGAATTGGTTGAAGG+TGG | + | chr3_4:78499221-78499240 | None:intergenic | 40.0% | |
! | CATAACCACAACTGATAACG+TGG | + | chr3_4:78499262-78499281 | None:intergenic | 40.0% |
! | ATTTTCTGACTTCCCCAGAT+TGG | - | chr3_4:78499583-78499602 | Msa0524950:CDS | 40.0% |
ACCATAGATCCATCCAATCT+GGG | + | chr3_4:78499599-78499618 | None:intergenic | 40.0% | |
AACCATAGATCCATCCAATC+TGG | + | chr3_4:78499600-78499619 | None:intergenic | 40.0% | |
TGACTGAAGATATCCTGACT+GGG | - | chr3_4:78499623-78499642 | Msa0524950:intron | 40.0% | |
AGACGGTCTGAAAGATTGAT+GGG | + | chr3_4:78499721-78499740 | None:intergenic | 40.0% | |
GAAGATCTCTATTGAACCCA+AGG | + | chr3_4:78499764-78499783 | None:intergenic | 40.0% | |
CAATAGAGATCTTCCTTAGC+AGG | - | chr3_4:78499770-78499789 | Msa0524950:intron | 40.0% | |
ATAAAGGACAATGCCTGCTA+AGG | + | chr3_4:78499786-78499805 | None:intergenic | 40.0% | |
! | TTAGCAGGCATTGTCCTTTA+TGG | - | chr3_4:78499785-78499804 | Msa0524950:intron | 40.0% |
! | AGGCATTGTCCTTTATGGTA+TGG | - | chr3_4:78499790-78499809 | Msa0524950:intron | 40.0% |
CCATTGTAGCCATACCATAA+AGG | + | chr3_4:78499802-78499821 | None:intergenic | 40.0% | |
CCTTTATGGTATGGCTACAA+TGG | - | chr3_4:78499799-78499818 | Msa0524950:intron | 40.0% | |
TATGGTATGGCTACAATGGA+AGG | - | chr3_4:78499803-78499822 | Msa0524950:intron | 40.0% | |
AGCAATGGGATTGAGGTAAA+GGG | + | chr3_4:78499874-78499893 | None:intergenic | 40.0% | |
AAGCAATGGGATTGAGGTAA+AGG | + | chr3_4:78499875-78499894 | None:intergenic | 40.0% | |
!! | CTACTTCAATTCTGGAGCTT+AGG | - | chr3_4:78500087-78500106 | Msa0524950:CDS | 40.0% |
!!! | AACGAGCAGTTTTGGGTTAT+CGG | - | chr3_4:78500143-78500162 | Msa0524950:CDS | 40.0% |
! | ATCTTTTCGCCGTGTTTCAA+GGG | - | chr3_4:78500180-78500199 | Msa0524950:CDS | 40.0% |
TTTGAGAAGCCCTTGAAACA+CGG | + | chr3_4:78500192-78500211 | None:intergenic | 40.0% | |
TCAAAGGCAAATGACGAAGA+CGG | - | chr3_4:78500248-78500267 | Msa0524950:intron | 40.0% | |
CTGAGCTATACGTGTTCAAA+TGG | - | chr3_4:78500279-78500298 | Msa0524950:intron | 40.0% | |
! | GTGTCTTTTGCCATAAACAG+TGG | - | chr3_4:78500365-78500384 | Msa0524950:CDS | 40.0% |
AACAGTGGTTACCAATCTTG+GGG | - | chr3_4:78500380-78500399 | Msa0524950:CDS | 40.0% | |
CCAAAAGACCCTTCAAGAAA+GGG | + | chr3_4:78500457-78500476 | None:intergenic | 40.0% | |
! | CCTTTCTTGAAGGGTCTTTT+GGG | - | chr3_4:78500455-78500474 | Msa0524950:CDS | 40.0% |
! | CTTTCTTGAAGGGTCTTTTG+GGG | - | chr3_4:78500456-78500475 | Msa0524950:CDS | 40.0% |
! | CACCAACCATTGTTATTGTC+TGG | - | chr3_4:78500492-78500511 | Msa0524950:CDS | 40.0% |
! | TATTCTCTTTGTTGTGGGTG+AGG | - | chr3_4:78500534-78500553 | Msa0524950:intron | 40.0% |
TTGTTGGGATCAGAGATGAA+GGG | + | chr3_4:78500566-78500585 | None:intergenic | 40.0% | |
TTTGTTGGGATCAGAGATGA+AGG | + | chr3_4:78500567-78500586 | None:intergenic | 40.0% | |
TCATCATCCAATAGTCAGTG+TGG | - | chr3_4:78500587-78500606 | Msa0524950:intron | 40.0% | |
! | GTTGATACCACACTGACTAT+TGG | + | chr3_4:78500597-78500616 | None:intergenic | 40.0% |
ACAAGGTGCAATGTGATGAT+TGG | - | chr3_4:78500864-78500883 | Msa0524950:five_prime_UTR | 40.0% | |
! | CTTGATGATCAGAGTTGTGT+TGG | - | chr3_4:78500944-78500963 | Msa0524950:five_prime_UTR | 40.0% |
CGATCTGCGTTCAGATATAC+AGG | + | chr3_4:78494572-78494591 | None:intergenic | 45.0% | |
CAGAGAGTGATGCAGATGAA+TGG | + | chr3_4:78494611-78494630 | None:intergenic | 45.0% | |
CACAATATGGAAGCCTCTTC+CGG | - | chr3_4:78494632-78494651 | Msa0524950:three_prime_UTR | 45.0% | |
GAACAAGCTCGTTACGATTG+TGG | + | chr3_4:78494673-78494692 | None:intergenic | 45.0% | |
TAAGAAACTAACCCCGCTGT+CGG | + | chr3_4:78494714-78494733 | None:intergenic | 45.0% | |
!! | TCATCATCTCCATCGACTCT+AGG | + | chr3_4:78495218-78495237 | None:intergenic | 45.0% |
CCCTGCTTATTCACCTTAAG+AGG | + | chr3_4:78495593-78495612 | None:intergenic | 45.0% | |
! | GTGAATAAGCAGGGTATTCG+AGG | - | chr3_4:78495599-78495618 | Msa0524950:CDS | 45.0% |
GTGAGCTTAGCTCAATTGGT+AGG | + | chr3_4:78495661-78495680 | None:intergenic | 45.0% | |
CCTTGTGAGCTTAGCTCAAT+TGG | + | chr3_4:78495665-78495684 | None:intergenic | 45.0% | |
CCAATTGAGCTAAGCTCACA+AGG | - | chr3_4:78495662-78495681 | Msa0524950:CDS | 45.0% | |
CAATCTGTCCGAACTACTTC+TGG | - | chr3_4:78495839-78495858 | Msa0524950:intron | 45.0% | |
CCAAAGGACCAGAAGTAGTT+CGG | + | chr3_4:78495850-78495869 | None:intergenic | 45.0% | |
CGAACTACTTCTGGTCCTTT+GGG | - | chr3_4:78495848-78495867 | Msa0524950:intron | 45.0% | |
GTGAGTGAGCTTTCTCAGAT+GGG | + | chr3_4:78495874-78495893 | None:intergenic | 45.0% | |
AGTGAGTGAGCTTTCTCAGA+TGG | + | chr3_4:78495875-78495894 | None:intergenic | 45.0% | |
TACAGTTCCGGTGAGAATTG+TGG | - | chr3_4:78495999-78496018 | Msa0524950:intron | 45.0% | |
GATGGATCCACAATTCTCAC+CGG | + | chr3_4:78496009-78496028 | None:intergenic | 45.0% | |
CAGTCTTGACAACCATGAGA+AGG | + | chr3_4:78496344-78496363 | None:intergenic | 45.0% | |
ATCATCTACAGGTACAGCAG+AGG | + | chr3_4:78496544-78496563 | None:intergenic | 45.0% | |
TCTGCTGTACCTGTAGATGA+TGG | - | chr3_4:78496543-78496562 | Msa0524950:CDS | 45.0% | |
TGATGGAGAAAGTTGGATGG+AGG | - | chr3_4:78496560-78496579 | Msa0524950:CDS | 45.0% | |
! | TATCTAGAGTGTAGGCTTGG+GGG | - | chr3_4:78496644-78496663 | Msa0524950:CDS | 45.0% |
ATGCTCGACAACCTATGAGT+CGG | - | chr3_4:78496865-78496884 | Msa0524950:intron | 45.0% | |
ATGGGTACAATCCGACTCAT+AGG | + | chr3_4:78496879-78496898 | None:intergenic | 45.0% | |
GGTCAGCTGAGATGAAGAAA+TGG | + | chr3_4:78496898-78496917 | None:intergenic | 45.0% | |
CACGATGACAACACGATAAG+GGG | + | chr3_4:78496919-78496938 | None:intergenic | 45.0% | |
ATCGTGTTGTCATCGTGTTC+CGG | - | chr3_4:78496922-78496941 | Msa0524950:CDS | 45.0% | |
GCAATATCGTGTAACTCACC+CGG | - | chr3_4:78496968-78496987 | Msa0524950:CDS | 45.0% | |
! | GTGGGTAAGCATCTTTTACC+GGG | + | chr3_4:78496989-78497008 | None:intergenic | 45.0% |
! | CGGTTAATGGGAGACCATTT+TGG | + | chr3_4:78497074-78497093 | None:intergenic | 45.0% |
GTTTCCTTCACTGTTGGACT+TGG | - | chr3_4:78497138-78497157 | Msa0524950:intron | 45.0% | |
TGATGGAGAACCATCACAGT+TGG | - | chr3_4:78497229-78497248 | Msa0524950:intron | 45.0% | |
! | GTACTGACAAATACGTCGAC+AGG | + | chr3_4:78497257-78497276 | None:intergenic | 45.0% |
CGACGTATTTGTCAGTACAG+TGG | - | chr3_4:78497259-78497278 | Msa0524950:intron | 45.0% | |
! | CAATAGGTGGCTCTTTGAGA+GGG | + | chr3_4:78497286-78497305 | None:intergenic | 45.0% |
ACAATAGGTGGCTCTTTGAG+AGG | + | chr3_4:78497287-78497306 | None:intergenic | 45.0% | |
AGCAAGAAACCTTGTCGACA+GGG | + | chr3_4:78497349-78497368 | None:intergenic | 45.0% | |
TAGCAAGAAACCTTGTCGAC+AGG | + | chr3_4:78497350-78497369 | None:intergenic | 45.0% | |
AGCCGAGTTTGCAAAGATGT+GGG | - | chr3_4:78497421-78497440 | Msa0524950:intron | 45.0% | |
CACCCACATCTTTGCAAACT+CGG | + | chr3_4:78497426-78497445 | None:intergenic | 45.0% | |
CGTCGCTCCTTAACAAAAGA+GGG | + | chr3_4:78497536-78497555 | None:intergenic | 45.0% | |
TCGTCGCTCCTTAACAAAAG+AGG | + | chr3_4:78497537-78497556 | None:intergenic | 45.0% | |
TAAAGCTCAGAAGATGCCAG+AGG | - | chr3_4:78497701-78497720 | Msa0524950:CDS | 45.0% | |
TTGGCCTGGAAATAATCCCA+GGG | - | chr3_4:78497752-78497771 | Msa0524950:CDS | 45.0% | |
TGATCCCTGGGATTATTTCC+AGG | + | chr3_4:78497759-78497778 | None:intergenic | 45.0% | |
AATAATCCCAGGGATCATCC+TGG | - | chr3_4:78497762-78497781 | Msa0524950:CDS | 45.0% | |
ATCATTCCAGGATGATCCCT+GGG | + | chr3_4:78497771-78497790 | None:intergenic | 45.0% | |
AATCATTCCAGGATGATCCC+TGG | + | chr3_4:78497772-78497791 | None:intergenic | 45.0% | |
GGATCATCCTGGAATGATTC+AGG | - | chr3_4:78497773-78497792 | Msa0524950:intron | 45.0% | |
! | CAATAATGGTGGAGGTTCTG+CGG | + | chr3_4:78497820-78497839 | None:intergenic | 45.0% |
TGTGGTATGCAGGTGTTCTT+AGG | - | chr3_4:78497866-78497885 | Msa0524950:intron | 45.0% | |
CAGGTGTTCTTAGGACATAG+TGG | - | chr3_4:78497875-78497894 | Msa0524950:intron | 45.0% | |
GTGTTCTTAGGACATAGTGG+AGG | - | chr3_4:78497878-78497897 | Msa0524950:intron | 45.0% | |
CGAGACACATAAACAAGCCT+GGG | + | chr3_4:78497929-78497948 | None:intergenic | 45.0% | |
ACGAGACACATAAACAAGCC+TGG | + | chr3_4:78497930-78497949 | None:intergenic | 45.0% | |
TTCTTGTGATGTTGGAAGCC+TGG | + | chr3_4:78497962-78497981 | None:intergenic | 45.0% | |
AGGCTTCCAACATCACAAGA+AGG | - | chr3_4:78497961-78497980 | Msa0524950:CDS | 45.0% | |
TTCCAACATCACAAGAAGGC+TGG | - | chr3_4:78497965-78497984 | Msa0524950:CDS | 45.0% | |
CACGGGAAACAGCCATTAAA+AGG | + | chr3_4:78498065-78498084 | None:intergenic | 45.0% | |
GTTTCTGCTGTCTTGACCAA+CGG | - | chr3_4:78498328-78498347 | Msa0524950:CDS | 45.0% | |
AGCAGTTGGAGTGTAATGCA+AGG | + | chr3_4:78498630-78498649 | None:intergenic | 45.0% | |
!! | CCTGACCTTTCAAGTTGATC+TGG | + | chr3_4:78498680-78498699 | None:intergenic | 45.0% |
CCAGATCAACTTGAAAGGTC+AGG | - | chr3_4:78498677-78498696 | Msa0524950:intron | 45.0% | |
GAAAGGTCAGGATGGTATTC+AGG | - | chr3_4:78498689-78498708 | Msa0524950:intron | 45.0% | |
AACCAGTTCCCACATAGACA+GGG | + | chr3_4:78498716-78498735 | None:intergenic | 45.0% | |
! | AGAAGTACGGTGACAAGAAG+AGG | - | chr3_4:78498856-78498875 | Msa0524950:intron | 45.0% |
GAAGTACGGTGACAAGAAGA+GGG | - | chr3_4:78498857-78498876 | Msa0524950:intron | 45.0% | |
AAGTACGGTGACAAGAAGAG+GGG | - | chr3_4:78498858-78498877 | Msa0524950:intron | 45.0% | |
!! | AAGAGCTTGGAGAAGCGTTT+CGG | - | chr3_4:78499146-78499165 | Msa0524950:intron | 45.0% |
GCAATCCACGTTATCAGTTG+TGG | - | chr3_4:78499254-78499273 | Msa0524950:CDS | 45.0% | |
CCATAGATCCATCCAATCTG+GGG | + | chr3_4:78499598-78499617 | None:intergenic | 45.0% | |
GTGACTGAAGATATCCTGAC+TGG | - | chr3_4:78499622-78499641 | Msa0524950:intron | 45.0% | |
CATGCATCTTAAACCCAGTC+AGG | + | chr3_4:78499639-78499658 | None:intergenic | 45.0% | |
TTAAGATGCATGCACGTGGT+TGG | - | chr3_4:78499647-78499666 | Msa0524950:intron | 45.0% | |
GAGACGGTCTGAAAGATTGA+TGG | + | chr3_4:78499722-78499741 | None:intergenic | 45.0% | |
TCTTTCAGACCGTCTCAATC+AGG | - | chr3_4:78499726-78499745 | Msa0524950:intron | 45.0% | |
ATGGCTACAATGGAAGGATG+AGG | - | chr3_4:78499809-78499828 | Msa0524950:intron | 45.0% | |
ATATAAGCCAGCCTCATGAG+AGG | + | chr3_4:78499835-78499854 | None:intergenic | 45.0% | |
GCAATGGGATTGAGGTAAAG+GGG | + | chr3_4:78499873-78499892 | None:intergenic | 45.0% | |
!! | CTTCAATTCTGGAGCTTAGG+TGG | - | chr3_4:78500090-78500109 | Msa0524950:CDS | 45.0% |
!! | GTGGTGTTGGTATAGAAGAC+TGG | - | chr3_4:78500114-78500133 | Msa0524950:CDS | 45.0% |
! | GTGTTGGTATAGAAGACTGG+TGG | - | chr3_4:78500117-78500136 | Msa0524950:CDS | 45.0% |
! | GTGGAGAAACGAGCAGTTTT+GGG | - | chr3_4:78500136-78500155 | Msa0524950:CDS | 45.0% |
! | CATCTTTTCGCCGTGTTTCA+AGG | - | chr3_4:78500179-78500198 | Msa0524950:CDS | 45.0% |
CAAAGGCAAATGACGAAGAC+GGG | - | chr3_4:78500249-78500268 | Msa0524950:intron | 45.0% | |
AAAGGCAAATGACGAAGACG+GGG | - | chr3_4:78500250-78500269 | Msa0524950:intron | 45.0% | |
!! | CAAATAGTGGACCCCAAGAT+TGG | + | chr3_4:78500394-78500413 | None:intergenic | 45.0% |
CAATCTTGGGGTCCACTATT+TGG | - | chr3_4:78500392-78500411 | Msa0524950:CDS | 45.0% | |
! | CCCTTTCTTGAAGGGTCTTT+TGG | - | chr3_4:78500454-78500473 | Msa0524950:CDS | 45.0% |
CCCAAAAGACCCTTCAAGAA+AGG | + | chr3_4:78500458-78500477 | None:intergenic | 45.0% | |
GCCCAGACAATAACAATGGT+TGG | + | chr3_4:78500497-78500516 | None:intergenic | 45.0% | |
AACGGCCCAGACAATAACAA+TGG | + | chr3_4:78500501-78500520 | None:intergenic | 45.0% | |
TGTTGGGATCAGAGATGAAG+GGG | + | chr3_4:78500565-78500584 | None:intergenic | 45.0% | |
AGGTGCAATGTGATGATTGG+TGG | - | chr3_4:78500867-78500886 | Msa0524950:five_prime_UTR | 45.0% | |
!!! | ATAATTTTTTAATTACAAAT+TGG | + | chr3_4:78498568-78498587 | None:intergenic | 5.0% |
!!! | ATTAAAAAATTATTTTCTTT+TGG | - | chr3_4:78498575-78498594 | Msa0524950:intron | 5.0% |
GATGTTGGAACAACACCCAC+CGG | - | chr3_4:78494975-78494994 | Msa0524950:CDS | 50.0% | |
GCAACAAACACATCACCGGT+GGG | + | chr3_4:78494993-78495012 | None:intergenic | 50.0% | |
AGCAACAAACACATCACCGG+TGG | + | chr3_4:78494994-78495013 | None:intergenic | 50.0% | |
CAACCTCCTCTTCTCACCAA+TGG | - | chr3_4:78495365-78495384 | Msa0524950:CDS | 50.0% | |
GTTTGGCCATTGGTGAGAAG+AGG | + | chr3_4:78495374-78495393 | None:intergenic | 50.0% | |
CCGAACTACTTCTGGTCCTT+TGG | - | chr3_4:78495847-78495866 | Msa0524950:intron | 50.0% | |
AGCACTATACCTGGTTGCCT+TGG | + | chr3_4:78495911-78495930 | None:intergenic | 50.0% | |
GACTGGAAGGAAAGGGTTGA+AGG | - | chr3_4:78496063-78496082 | Msa0524950:intron | 50.0% | |
GGAAGGAAAGGGTTGAAGGT+TGG | - | chr3_4:78496067-78496086 | Msa0524950:intron | 50.0% | |
TATGCTGATGGGAAAAGCGG+AGG | - | chr3_4:78496132-78496151 | Msa0524950:intron | 50.0% | |
AGCGGAGGAGGAGATATTGA+AGG | - | chr3_4:78496147-78496166 | Msa0524950:CDS | 50.0% | |
GCGGAGGAGGAGATATTGAA+GGG | - | chr3_4:78496148-78496167 | Msa0524950:CDS | 50.0% | |
GGAGGAGATATTGAAGGGAC+TGG | - | chr3_4:78496153-78496172 | Msa0524950:CDS | 50.0% | |
GTGTTCCGGCTGATAGTTCT+TGG | - | chr3_4:78496936-78496955 | Msa0524950:CDS | 50.0% | |
ACCGTGAGACTTATCTGGAG+AGG | - | chr3_4:78497090-78497109 | Msa0524950:CDS | 50.0% | |
GCCTCTCCAGATAAGTCTCA+CGG | + | chr3_4:78497094-78497113 | None:intergenic | 50.0% | |
ATCTGGAGAGGCTTGCCATA+AGG | - | chr3_4:78497102-78497121 | Msa0524950:CDS | 50.0% | |
GAGAGGCTTGCCATAAGGTT+TGG | - | chr3_4:78497107-78497126 | Msa0524950:intron | 50.0% | |
CAAGCCAAGTCCAACAGTGA+AGG | + | chr3_4:78497145-78497164 | None:intergenic | 50.0% | |
CTTCACTGTTGGACTTGGCT+TGG | - | chr3_4:78497143-78497162 | Msa0524950:intron | 50.0% | |
! | TGTTGACTACCCTGTCGACA+AGG | - | chr3_4:78497337-78497356 | Msa0524950:intron | 50.0% |
CAGCCGAGTTTGCAAAGATG+TGG | - | chr3_4:78497420-78497439 | Msa0524950:intron | 50.0% | |
TAAGGAGCGACGAGCAATGA+AGG | - | chr3_4:78497544-78497563 | Msa0524950:CDS | 50.0% | |
CAATGCAGGATGGAACTCCT+TGG | - | chr3_4:78497733-78497752 | Msa0524950:CDS | 50.0% | |
CTGGGATTATTTCCAGGCCA+AGG | + | chr3_4:78497753-78497772 | None:intergenic | 50.0% | |
CTTGGCCTGGAAATAATCCC+AGG | - | chr3_4:78497751-78497770 | Msa0524950:CDS | 50.0% | |
AGTGGAGGGCTTGATACAGA+TGG | - | chr3_4:78497893-78497912 | Msa0524950:CDS | 50.0% | |
CAGATGGCAATGAACTTCCC+AGG | - | chr3_4:78497909-78497928 | Msa0524950:CDS | 50.0% | |
CTCCAGCCTTCTTGTGATGT+TGG | + | chr3_4:78497970-78497989 | None:intergenic | 50.0% | |
GGCTGGAGCTATGAATGCTT+TGG | - | chr3_4:78497982-78498001 | Msa0524950:CDS | 50.0% | |
ATGTGTTCCATGGCGTTGTC+TGG | - | chr3_4:78498031-78498050 | Msa0524950:CDS | 50.0% | |
GATTCACAGCACCACTTAGC+AGG | + | chr3_4:78498146-78498165 | None:intergenic | 50.0% | |
TATTCAGGGCCCTGTCTATG+TGG | - | chr3_4:78498704-78498723 | Msa0524950:intron | 50.0% | |
ATTCAGGGCCCTGTCTATGT+GGG | - | chr3_4:78498705-78498724 | Msa0524950:intron | 50.0% | |
CAACCAGTTCCCACATAGAC+AGG | + | chr3_4:78498717-78498736 | None:intergenic | 50.0% | |
!! | GATATAGAGGAGGGTGTCGA+AGG | - | chr3_4:78498924-78498943 | Msa0524950:intron | 50.0% |
CAAGACAGAATGGGGCAAAG+AGG | - | chr3_4:78499286-78499305 | Msa0524950:CDS | 50.0% | |
TCTGACTTCCCCAGATTGGA+TGG | - | chr3_4:78499587-78499606 | Msa0524950:CDS | 50.0% | |
CCCCAGATTGGATGGATCTA+TGG | - | chr3_4:78499595-78499614 | Msa0524950:CDS | 50.0% | |
! | GGGTTTAAGATGCATGCACG+TGG | - | chr3_4:78499643-78499662 | Msa0524950:intron | 50.0% |
ACGAGGTGGCATGCAATAGA+CGG | + | chr3_4:78499677-78499696 | None:intergenic | 50.0% | |
ACCGTCTCAATCAGGTGCTT+CGG | - | chr3_4:78499734-78499753 | Msa0524950:intron | 50.0% | |
! | ACCGAAGCACCTGATTGAGA+CGG | + | chr3_4:78499738-78499757 | None:intergenic | 50.0% |
TCTCAATCAGGTGCTTCGGT+GGG | - | chr3_4:78499738-78499757 | Msa0524950:intron | 50.0% | |
GTACGCAAGCAATGGGATTG+AGG | + | chr3_4:78499881-78499900 | None:intergenic | 50.0% | |
GCACACAGTACGCAAGCAAT+GGG | + | chr3_4:78499888-78499907 | None:intergenic | 50.0% | |
AGCACACAGTACGCAAGCAA+TGG | + | chr3_4:78499889-78499908 | None:intergenic | 50.0% | |
!! | ATTCTGGAGCTTAGGTGGAG+TGG | - | chr3_4:78500095-78500114 | Msa0524950:CDS | 50.0% |
! | GGTGGAGAAACGAGCAGTTT+TGG | - | chr3_4:78500135-78500154 | Msa0524950:CDS | 50.0% |
!!! | GAGCAGTTTTGGGTTATCGG+TGG | - | chr3_4:78500146-78500165 | Msa0524950:CDS | 50.0% |
! | GGCTTCTCAAAGTGCTTGCA+GGG | - | chr3_4:78500201-78500220 | Msa0524950:CDS | 50.0% |
TATGGAAGCCTCTTCCGGCA+TGG | - | chr3_4:78494637-78494656 | Msa0524950:three_prime_UTR | 55.0% | |
TCAGGGAGTCCTAGAGTCGA+TGG | - | chr3_4:78495206-78495225 | Msa0524950:CDS | 55.0% | |
TGGCCATTGGTGAGAAGAGG+AGG | + | chr3_4:78495371-78495390 | None:intergenic | 55.0% | |
GCTTTCTCAGATGGGCCCAA+AGG | + | chr3_4:78495866-78495885 | None:intergenic | 55.0% | |
TCGACAGGAGCCAACTGTGA+TGG | + | chr3_4:78497242-78497261 | None:intergenic | 55.0% | |
GCTCAGAAGATGCCAGAGGA+AGG | - | chr3_4:78497705-78497724 | Msa0524950:CDS | 55.0% | |
AGAAGATGCCAGAGGAAGGC+TGG | - | chr3_4:78497709-78497728 | Msa0524950:CDS | 55.0% | |
TGCATTGTCCAGCCTTCCTC+TGG | + | chr3_4:78497720-78497739 | None:intergenic | 55.0% | |
AGAGGAAGGCTGGACAATGC+AGG | - | chr3_4:78497719-78497738 | Msa0524950:CDS | 55.0% | |
GAAGGCTGGACAATGCAGGA+TGG | - | chr3_4:78497723-78497742 | Msa0524950:CDS | 55.0% | |
GTGTCTCGTGAAAAGCGACC+AGG | - | chr3_4:78497941-78497960 | Msa0524950:CDS | 55.0% | |
! | GAAGCGTTTCGGACAGTCTC+CGG | - | chr3_4:78499157-78499176 | Msa0524950:intron | 55.0% |
GCTGCCACATTCATGGAGCA+AGG | - | chr3_4:78499188-78499207 | Msa0524950:intron | 55.0% | |
GCCACATTCATGGAGCAAGG+TGG | - | chr3_4:78499191-78499210 | Msa0524950:intron | 55.0% | |
GCCACCTTGCTCCATGAATG+TGG | + | chr3_4:78499195-78499214 | None:intergenic | 55.0% | |
CTATTGCATGCCACCTCGTC+CGG | - | chr3_4:78499678-78499697 | Msa0524950:intron | 55.0% | |
GGAGCAGAACCCTTGAATGC+CGG | + | chr3_4:78499700-78499719 | None:intergenic | 55.0% | |
GTCTCAATCAGGTGCTTCGG+TGG | - | chr3_4:78499737-78499756 | Msa0524950:intron | 55.0% | |
GAAGGATGAGGCCTCTCATG+AGG | - | chr3_4:78499821-78499840 | Msa0524950:intron | 55.0% | |
GAGCTTAGGTGGAGTGGTGT+TGG | - | chr3_4:78500101-78500120 | Msa0524950:CDS | 55.0% | |
! | GGGCTTCTCAAAGTGCTTGC+AGG | - | chr3_4:78500200-78500219 | Msa0524950:CDS | 55.0% |
CGTCACGATTCTGCCGACAG+CGG | - | chr3_4:78494698-78494717 | Msa0524950:three_prime_UTR | 60.0% | |
GTCACGATTCTGCCGACAGC+GGG | - | chr3_4:78494699-78494718 | Msa0524950:three_prime_UTR | 60.0% | |
TCACGATTCTGCCGACAGCG+GGG | - | chr3_4:78494700-78494719 | Msa0524950:three_prime_UTR | 60.0% | |
GCTGATGGGAAAAGCGGAGG+AGG | - | chr3_4:78496135-78496154 | Msa0524950:intron | 60.0% | |
CAGGATGGAACTCCTTGGCC+TGG | - | chr3_4:78497738-78497757 | Msa0524950:CDS | 60.0% | |
GGCCCTGTCTATGTGGGAAC+TGG | - | chr3_4:78498711-78498730 | Msa0524950:intron | 60.0% | |
CCACCTCGTCCGGCATTCAA+GGG | - | chr3_4:78499688-78499707 | Msa0524950:intron | 60.0% | |
GAACCCTTGAATGCCGGACG+AGG | + | chr3_4:78499694-78499713 | None:intergenic | 60.0% | |
GATGAGGCCTCTCATGAGGC+TGG | - | chr3_4:78499825-78499844 | Msa0524950:intron | 60.0% | |
GCCTCTTCCGGCATGGTTGC+TGG | - | chr3_4:78494644-78494663 | Msa0524950:three_prime_UTR | 65.0% | |
GCCAGCAACCATGCCGGAAG+AGG | + | chr3_4:78494648-78494667 | None:intergenic | 65.0% | |
GTGGGAGCCAGCAACCATGC+CGG | + | chr3_4:78494654-78494673 | None:intergenic | 65.0% | |
GCCACCTCGTCCGGCATTCA+AGG | - | chr3_4:78499687-78499706 | Msa0524950:intron | 65.0% | |
CCCTTGAATGCCGGACGAGG+TGG | + | chr3_4:78499691-78499710 | None:intergenic | 65.0% | |
TCAGGTGCTTCGGTGGGCCT+TGG | - | chr3_4:78499744-78499763 | Msa0524950:intron | 65.0% | |
CAGGTGCTTCGGTGGGCCTT+GGG | - | chr3_4:78499745-78499764 | Msa0524950:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 78494414 | 78501032 | 78494414 | ID=Msa0524950;Name=Msa0524950 |
chr3_4 | mRNA | 78494414 | 78501032 | 78494414 | ID=Msa0524950-mRNA-1;Parent=Msa0524950;Name=Msa0524950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=224|0.92|0.92|1|1|1|14|410|1070 |
chr3_4 | exon | 78494414 | 78495411 | 78494414 | ID=Msa0524950-mRNA-1:exon:23323;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78495495 | 78495794 | 78495495 | ID=Msa0524950-mRNA-1:exon:23322;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78496139 | 78496335 | 78496139 | ID=Msa0524950-mRNA-1:exon:23321;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78496501 | 78496765 | 78496501 | ID=Msa0524950-mRNA-1:exon:23320;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78496912 | 78497124 | 78496912 | ID=Msa0524950-mRNA-1:exon:23319;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78497443 | 78497568 | 78497443 | ID=Msa0524950-mRNA-1:exon:23318;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78497652 | 78497789 | 78497652 | ID=Msa0524950-mRNA-1:exon:23317;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78497881 | 78498226 | 78497881 | ID=Msa0524950-mRNA-1:exon:23316;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78498323 | 78498589 | 78498323 | ID=Msa0524950-mRNA-1:exon:23315;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78499247 | 78499442 | 78499247 | ID=Msa0524950-mRNA-1:exon:23314;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78499526 | 78499637 | 78499526 | ID=Msa0524950-mRNA-1:exon:23313;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78500052 | 78500236 | 78500052 | ID=Msa0524950-mRNA-1:exon:23312;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78500327 | 78500522 | 78500327 | ID=Msa0524950-mRNA-1:exon:23311;Parent=Msa0524950-mRNA-1 |
chr3_4 | exon | 78500725 | 78501032 | 78500725 | ID=Msa0524950-mRNA-1:exon:23310;Parent=Msa0524950-mRNA-1 |
chr3_4 | five_prime_UTR | 78500809 | 78501032 | 78500809 | ID=Msa0524950-mRNA-1:five_prime_utr;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78500725 | 78500808 | 78500725 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78500327 | 78500522 | 78500327 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78500052 | 78500236 | 78500052 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78499526 | 78499637 | 78499526 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78499247 | 78499442 | 78499247 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78498323 | 78498589 | 78498323 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78497881 | 78498226 | 78497881 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78497652 | 78497789 | 78497652 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78497443 | 78497568 | 78497443 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78496912 | 78497124 | 78496912 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78496501 | 78496765 | 78496501 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78496139 | 78496335 | 78496139 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78495495 | 78495794 | 78495495 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | CDS | 78494824 | 78495411 | 78494824 | ID=Msa0524950-mRNA-1:cds;Parent=Msa0524950-mRNA-1 |
chr3_4 | three_prime_UTR | 78494414 | 78494823 | 78494414 | ID=Msa0524950-mRNA-1:three_prime_utr;Parent=Msa0524950-mRNA-1 |
Gene Sequence |
Protein sequence |