Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524840 | XP_003603419.1 | 98.255 | 1089 | 0 | 2 | 1 | 1072 | 1 | 1087 | 0.0 | 2212 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524840 | sp|O48946|CESA1_ARATH | 82.461 | 1089 | 163 | 7 | 1 | 1070 | 1 | 1080 | 0.0 | 1822 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524840 | G7JB42 | 98.255 | 1089 | 0 | 2 | 1 | 1072 | 1 | 1087 | 0.0 | 2212 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0170130 | Msa0524840 | 0.832616 | 8.541254e-56 | -8.615850e-47 |
Msa0198210 | Msa0524840 | 0.874411 | 6.898985e-68 | -8.615850e-47 |
Msa0374190 | Msa0524840 | 0.870198 | 1.749173e-66 | -8.615850e-47 |
Msa0382630 | Msa0524840 | 0.954749 | 1.464765e-112 | -8.615850e-47 |
Msa0382690 | Msa0524840 | 0.899548 | 1.776795e-77 | -8.615850e-47 |
Msa0400420 | Msa0524840 | 0.819361 | 1.209216e-52 | -8.615850e-47 |
Msa0423460 | Msa0524840 | 0.820229 | 7.659608e-53 | -8.615850e-47 |
Msa0447440 | Msa0524840 | 0.895999 | 5.615775e-76 | -8.615850e-47 |
Msa0469610 | Msa0524840 | 0.849924 | 2.365293e-60 | -8.615850e-47 |
Msa0480420 | Msa0524840 | 0.994306 | 3.465619e-206 | -8.615850e-47 |
Msa0278160 | Msa0524840 | 0.823357 | 1.446512e-53 | -8.615850e-47 |
Msa0287660 | Msa0524840 | 0.805458 | 1.322064e-49 | -8.615850e-47 |
Msa0353500 | Msa0524840 | 0.886510 | 3.211451e-72 | -8.615850e-47 |
Msa0494950 | Msa0524840 | 0.865340 | 6.339397e-65 | -8.615850e-47 |
Msa0524840 | Msa0524950 | 0.995738 | 2.303867e-219 | -8.615850e-47 |
Msa0524840 | Msa0568760 | 0.886217 | 4.144850e-72 | -8.615850e-47 |
Msa0524840 | Msa0619010 | 0.915606 | 4.818543e-85 | -8.615850e-47 |
Msa0524840 | Msa0659080 | 0.881922 | 1.603857e-70 | -8.615850e-47 |
Msa0524840 | Msa0705570 | 0.919013 | 7.644147e-87 | -8.615850e-47 |
Msa0524840 | Msa1088150 | 0.802449 | 5.580516e-49 | -8.615850e-47 |
Msa0524840 | Msa1235470 | 0.820199 | 7.782727e-53 | -8.615850e-47 |
Msa0524840 | Msa1315760 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
Msa0524840 | Msa1366330 | 0.814337 | 1.621770e-51 | -8.615850e-47 |
Msa0524840 | Msa1466140 | 0.807709 | 4.428300e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524840 | MtrunA17_Chr3g0137951 | 98.255 | 1089 | 0 | 2 | 1 | 1072 | 1 | 1087 | 0.0 | 2212 |
Msa0524840 | MtrunA17_Chr3g0088821 | 66.790 | 1081 | 318 | 10 | 25 | 1072 | 6 | 1078 | 0.0 | 1472 |
Msa0524840 | MtrunA17_Chr8g0352231 | 67.438 | 1081 | 311 | 11 | 25 | 1072 | 6 | 1078 | 0.0 | 1443 |
Msa0524840 | MtrunA17_Chr8g0383701 | 61.490 | 1101 | 389 | 10 | 1 | 1072 | 1 | 1095 | 0.0 | 1376 |
Msa0524840 | MtrunA17_Chr1g0201731 | 61.186 | 1113 | 370 | 13 | 1 | 1072 | 5 | 1096 | 0.0 | 1368 |
Msa0524840 | MtrunA17_Chr4g0073711 | 63.172 | 1097 | 320 | 15 | 1 | 1072 | 1 | 1038 | 0.0 | 1368 |
Msa0524840 | MtrunA17_Chr2g0296991 | 59.748 | 1113 | 328 | 16 | 5 | 1072 | 7 | 1044 | 0.0 | 1329 |
Msa0524840 | MtrunA17_Chr7g0267731 | 61.209 | 1026 | 321 | 10 | 66 | 1072 | 19 | 986 | 0.0 | 1242 |
Msa0524840 | MtrunA17_Chr3g0078671 | 56.882 | 1097 | 400 | 12 | 1 | 1072 | 1 | 1049 | 0.0 | 1224 |
Msa0524840 | MtrunA17_Chr2g0284211 | 59.621 | 1055 | 320 | 18 | 40 | 1072 | 9 | 979 | 0.0 | 1222 |
Msa0524840 | MtrunA17_Chr8g0379241 | 68.616 | 838 | 227 | 9 | 256 | 1072 | 169 | 991 | 0.0 | 1203 |
Msa0524840 | MtrunA17_Chr8g0379241 | 46.296 | 54 | 29 | 0 | 37 | 90 | 6 | 59 | 7.97e-12 | 69.7 |
Msa0524840 | MtrunA17_Chr8g0364641 | 53.248 | 1093 | 378 | 15 | 1 | 1072 | 1 | 981 | 0.0 | 1157 |
Msa0524840 | MtrunA17_Chr1g0183381 | 64.354 | 836 | 252 | 9 | 256 | 1072 | 96 | 904 | 0.0 | 1131 |
Msa0524840 | MtrunA17_Chr4g0039801 | 45.949 | 938 | 376 | 19 | 219 | 1054 | 220 | 1128 | 0.0 | 791 |
Msa0524840 | MtrunA17_Chr5g0410641 | 45.379 | 963 | 375 | 21 | 203 | 1069 | 208 | 1115 | 0.0 | 785 |
Msa0524840 | MtrunA17_Chr7g0269741 | 47.141 | 927 | 365 | 20 | 227 | 1054 | 256 | 1156 | 0.0 | 772 |
Msa0524840 | MtrunA17_Chr1g0165411 | 44.717 | 937 | 378 | 17 | 218 | 1054 | 193 | 1089 | 0.0 | 760 |
Msa0524840 | MtrunA17_Chr1g0165421 | 44.025 | 954 | 408 | 18 | 213 | 1066 | 202 | 1129 | 0.0 | 754 |
Msa0524840 | MtrunA17_Chr2g0297351 | 44.046 | 949 | 397 | 19 | 219 | 1067 | 108 | 1022 | 0.0 | 754 |
Msa0524840 | MtrunA17_Chr7g0274751 | 39.159 | 904 | 334 | 23 | 219 | 1054 | 43 | 798 | 0.0 | 565 |
Msa0524840 | MtrunA17_Chr3g0102531 | 34.802 | 681 | 364 | 16 | 282 | 955 | 21 | 628 | 2.13e-117 | 379 |
Msa0524840 | MtrunA17_Chr2g0322361 | 32.941 | 765 | 406 | 17 | 312 | 1045 | 52 | 740 | 5.86e-117 | 378 |
Msa0524840 | MtrunA17_Chr3g0102541 | 34.940 | 664 | 353 | 16 | 299 | 955 | 38 | 629 | 2.14e-116 | 376 |
Msa0524840 | MtrunA17_Chr2g0322371 | 31.736 | 772 | 411 | 18 | 312 | 1052 | 47 | 733 | 1.31e-111 | 363 |
Msa0524840 | MtrunA17_Chr2g0322351 | 32.558 | 774 | 412 | 21 | 299 | 1045 | 37 | 727 | 8.43e-109 | 356 |
Msa0524840 | MtrunA17_Chr4g0025201 | 31.322 | 779 | 427 | 17 | 299 | 1048 | 37 | 736 | 1.54e-105 | 347 |
Msa0524840 | MtrunA17_Chr3g0095791 | 28.010 | 764 | 454 | 17 | 277 | 1030 | 13 | 690 | 2.58e-92 | 310 |
Msa0524840 | MtrunA17_Chr3g0077511 | 27.392 | 763 | 451 | 18 | 283 | 1030 | 19 | 693 | 3.71e-89 | 301 |
Msa0524840 | MtrunA17_Chr3g0102551 | 38.281 | 384 | 210 | 8 | 282 | 651 | 23 | 393 | 2.57e-83 | 286 |
Msa0524840 | MtrunA17_Chr3g0102551 | 31.132 | 212 | 124 | 4 | 763 | 955 | 426 | 634 | 4.41e-26 | 115 |
Msa0524840 | MtrunA17_Chr2g0322341 | 41.311 | 305 | 166 | 5 | 313 | 617 | 52 | 343 | 6.71e-74 | 248 |
Msa0524840 | MtrunA17_Chr1g0186381 | 36.250 | 400 | 222 | 8 | 261 | 651 | 4 | 379 | 3.13e-69 | 246 |
Msa0524840 | MtrunA17_Chr1g0186381 | 24.611 | 321 | 207 | 7 | 757 | 1049 | 421 | 734 | 1.30e-27 | 120 |
Msa0524840 | MtrunA17_Chr4g0046401 | 36.702 | 376 | 211 | 7 | 283 | 651 | 24 | 379 | 3.54e-69 | 246 |
Msa0524840 | MtrunA17_Chr4g0046401 | 29.360 | 344 | 214 | 8 | 726 | 1045 | 392 | 730 | 4.50e-33 | 137 |
Msa0524840 | MtrunA17_Chr2g0307191 | 35.054 | 368 | 205 | 6 | 283 | 649 | 19 | 353 | 2.26e-65 | 234 |
Msa0524840 | MtrunA17_Chr2g0307191 | 25.000 | 328 | 211 | 8 | 730 | 1030 | 372 | 691 | 5.93e-23 | 105 |
Msa0524840 | MtrunA17_Chr3g0094861 | 60.417 | 192 | 69 | 3 | 6 | 194 | 3 | 190 | 2.78e-65 | 223 |
Msa0524840 | MtrunA17_Chr2g0298581 | 35.294 | 374 | 206 | 7 | 283 | 654 | 19 | 358 | 2.14e-63 | 229 |
Msa0524840 | MtrunA17_Chr2g0298581 | 25.758 | 330 | 210 | 8 | 727 | 1029 | 369 | 690 | 8.51e-26 | 114 |
Msa0524840 | MtrunA17_Chr0c03g0490021 | 69.672 | 122 | 37 | 0 | 901 | 1022 | 1 | 122 | 3.25e-52 | 179 |
Msa0524840 | MtrunA17_Chr7g0252781 | 91.667 | 84 | 7 | 0 | 989 | 1072 | 6 | 89 | 1.04e-44 | 156 |
Msa0524840 | MtrunA17_Chr2g0322331 | 29.973 | 367 | 227 | 7 | 705 | 1045 | 9 | 371 | 4.63e-41 | 155 |
Msa0524840 | MtrunA17_Chr3g0126641 | 39.091 | 220 | 84 | 10 | 587 | 784 | 1 | 192 | 4.28e-32 | 124 |
Msa0524840 | MtrunA17_Chr2g0307241 | 39.375 | 160 | 86 | 4 | 283 | 441 | 19 | 168 | 2.04e-31 | 122 |
Msa0524840 | MtrunA17_Chr8g0355061 | 89.474 | 57 | 6 | 0 | 901 | 957 | 1 | 57 | 6.37e-31 | 115 |
Msa0524840 | MtrunA17_Chr7g0267741 | 58.333 | 60 | 25 | 0 | 35 | 94 | 4 | 63 | 1.20e-20 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0524840 | AT4G32410.1 | 82.461 | 1089 | 163 | 7 | 1 | 1070 | 1 | 1080 | 0.0 | 1822 |
Msa0524840 | AT2G25540.1 | 77.809 | 1068 | 198 | 5 | 7 | 1057 | 1 | 1046 | 0.0 | 1740 |
Msa0524840 | AT5G05170.1 | 67.598 | 1074 | 309 | 11 | 25 | 1072 | 5 | 1065 | 0.0 | 1481 |
Msa0524840 | AT5G17420.1 | 63.346 | 1094 | 311 | 16 | 1 | 1072 | 1 | 1026 | 0.0 | 1379 |
Msa0524840 | AT5G09870.1 | 61.182 | 1100 | 367 | 17 | 1 | 1072 | 1 | 1068 | 0.0 | 1347 |
Msa0524840 | AT5G44030.1 | 61.121 | 1088 | 319 | 12 | 34 | 1072 | 17 | 1049 | 0.0 | 1345 |
Msa0524840 | AT5G44030.2 | 61.131 | 1096 | 335 | 12 | 34 | 1072 | 17 | 1078 | 0.0 | 1344 |
Msa0524840 | AT5G64740.1 | 61.106 | 1103 | 378 | 15 | 1 | 1072 | 1 | 1083 | 0.0 | 1341 |
Msa0524840 | AT2G21770.1 | 60.036 | 1111 | 380 | 14 | 1 | 1072 | 1 | 1086 | 0.0 | 1338 |
Msa0524840 | AT4G39350.1 | 59.945 | 1091 | 409 | 7 | 1 | 1072 | 1 | 1082 | 0.0 | 1317 |
Msa0524840 | AT4G18780.1 | 59.263 | 1058 | 318 | 14 | 39 | 1068 | 8 | 980 | 0.0 | 1241 |
Msa0524840 | AT5G44030.3 | 69.689 | 772 | 185 | 7 | 348 | 1072 | 1 | 770 | 0.0 | 1114 |
Msa0524840 | AT3G03050.1 | 46.745 | 937 | 370 | 22 | 219 | 1054 | 223 | 1131 | 0.0 | 789 |
Msa0524840 | AT5G16910.1 | 47.565 | 883 | 338 | 20 | 266 | 1054 | 280 | 1131 | 0.0 | 773 |
Msa0524840 | AT4G38190.1 | 45.070 | 923 | 400 | 16 | 213 | 1054 | 196 | 1092 | 0.0 | 771 |
Msa0524840 | AT2G33100.2 | 44.909 | 933 | 391 | 18 | 219 | 1054 | 118 | 1024 | 0.0 | 769 |
Msa0524840 | AT2G33100.1 | 44.909 | 933 | 391 | 18 | 219 | 1054 | 118 | 1024 | 0.0 | 769 |
Msa0524840 | AT1G02730.1 | 47.032 | 893 | 352 | 17 | 262 | 1054 | 297 | 1168 | 0.0 | 765 |
Msa0524840 | AT1G32180.1 | 42.903 | 937 | 395 | 18 | 227 | 1052 | 59 | 966 | 0.0 | 733 |
Msa0524840 | AT1G32180.2 | 42.903 | 937 | 395 | 18 | 227 | 1052 | 59 | 966 | 0.0 | 733 |
Msa0524840 | AT2G32530.1 | 31.599 | 807 | 432 | 19 | 287 | 1050 | 24 | 753 | 9.41e-116 | 375 |
Msa0524840 | AT4G15320.5 | 31.754 | 781 | 421 | 18 | 283 | 1024 | 23 | 730 | 2.18e-113 | 369 |
Msa0524840 | AT4G15320.3 | 31.754 | 781 | 421 | 18 | 283 | 1024 | 23 | 730 | 2.68e-113 | 369 |
Msa0524840 | AT2G32620.1 | 32.980 | 755 | 393 | 18 | 311 | 1026 | 50 | 730 | 6.54e-112 | 365 |
Msa0524840 | AT2G32610.1 | 31.297 | 802 | 439 | 20 | 290 | 1050 | 27 | 757 | 1.20e-110 | 362 |
Msa0524840 | AT2G32540.1 | 31.410 | 780 | 419 | 17 | 311 | 1050 | 50 | 753 | 3.42e-110 | 360 |
Msa0524840 | AT4G15320.4 | 31.692 | 792 | 422 | 20 | 283 | 1024 | 23 | 745 | 6.59e-110 | 360 |
Msa0524840 | AT4G15290.1 | 30.848 | 778 | 428 | 18 | 311 | 1050 | 50 | 755 | 4.90e-106 | 349 |
Msa0524840 | AT2G32620.4 | 32.525 | 701 | 368 | 16 | 364 | 1026 | 1 | 634 | 4.37e-101 | 333 |
Msa0524840 | AT2G32620.3 | 34.923 | 587 | 292 | 13 | 311 | 877 | 50 | 566 | 5.67e-101 | 331 |
Msa0524840 | AT4G15320.2 | 30.654 | 734 | 354 | 17 | 283 | 950 | 23 | 667 | 2.32e-97 | 327 |
Msa0524840 | AT2G32620.2 | 33.571 | 560 | 280 | 13 | 311 | 850 | 50 | 537 | 4.63e-90 | 300 |
Msa0524840 | AT4G15320.1 | 29.625 | 773 | 354 | 20 | 283 | 950 | 23 | 710 | 2.84e-89 | 305 |
Msa0524840 | AT1G55850.1 | 39.642 | 391 | 203 | 10 | 311 | 685 | 65 | 438 | 4.20e-78 | 272 |
Msa0524840 | AT1G55850.1 | 33.333 | 204 | 112 | 5 | 765 | 948 | 420 | 619 | 8.62e-26 | 115 |
Msa0524840 | AT4G24010.1 | 38.987 | 395 | 212 | 11 | 281 | 663 | 25 | 402 | 2.05e-72 | 256 |
Msa0524840 | AT4G24010.1 | 29.900 | 301 | 184 | 5 | 750 | 1028 | 409 | 704 | 2.08e-32 | 136 |
Msa0524840 | AT4G23990.1 | 38.847 | 399 | 215 | 11 | 281 | 667 | 44 | 425 | 4.09e-71 | 253 |
Msa0524840 | AT4G23990.1 | 31.757 | 296 | 173 | 6 | 752 | 1024 | 430 | 719 | 9.77e-34 | 140 |
Msa0524840 | AT4G24000.1 | 38.462 | 390 | 209 | 10 | 281 | 662 | 22 | 388 | 3.27e-70 | 249 |
Msa0524840 | AT4G24000.1 | 27.760 | 317 | 196 | 8 | 756 | 1046 | 405 | 714 | 4.69e-31 | 131 |
Msa0524840 | AT4G23990.2 | 45.562 | 169 | 88 | 3 | 503 | 667 | 43 | 211 | 1.57e-34 | 140 |
Msa0524840 | AT4G23990.2 | 31.757 | 296 | 173 | 6 | 752 | 1024 | 216 | 505 | 5.39e-34 | 139 |
Msa0524840 | AT4G24000.2 | 45.625 | 160 | 81 | 2 | 503 | 662 | 43 | 196 | 3.79e-34 | 139 |
Msa0524840 | AT4G24000.2 | 27.760 | 317 | 196 | 8 | 756 | 1046 | 213 | 522 | 2.24e-31 | 130 |
Find 323 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTTCTTGAAGGGTCTTT+TGG | 0.125595 | 3_4:+78390520 | Msa0524840:CDS |
TCAGAAGATTGATTACTTAA+AGG | 0.160961 | 3_4:+78387569 | Msa0524840:CDS |
CAATCTTGGGGTCCACTATT+TGG | 0.164587 | 3_4:+78390458 | Msa0524840:CDS |
TTAGCAGGCATTGTCCTTTA+TGG | 0.181426 | 3_4:+78389851 | Msa0524840:CDS |
AGATTGGTAACCACTGTTTA+TGG | 0.193349 | 3_4:-78390441 | None:intergenic |
TATATCCTCCATATTAAATA+TGG | 0.199338 | 3_4:-78388973 | None:intergenic |
CACCATTCCCATATTTAATA+TGG | 0.200910 | 3_4:+78388965 | Msa0524840:CDS |
CGGTTAATGGGAGACCATTT+TGG | 0.207288 | 3_4:-78387141 | None:intergenic |
GCCTCTTCCGGCATGGTTGC+TGG | 0.232202 | 3_4:+78384738 | Msa0524840:CDS |
GAAAGCTCTTCTTTGCTATA+TGG | 0.232926 | 3_4:+78390480 | Msa0524840:CDS |
TATGAGTTTAAGTCCTTTGA+TGG | 0.251110 | 3_4:-78386094 | None:intergenic |
CAGATAAGTCTCACGGTTAA+TGG | 0.255036 | 3_4:-78387154 | None:intergenic |
TTCAAATTCTTCAATGGTTT+CGG | 0.261810 | 3_4:-78385018 | None:intergenic |
GAAAGGTCAGGATGGTATTC+AGG | 0.270878 | 3_4:+78388755 | Msa0524840:CDS |
CCGAACTACTTCTGGTCCTT+TGG | 0.273359 | 3_4:+78385917 | Msa0524840:CDS |
TCAGGTGCTTCGGTGGGCCT+TGG | 0.289335 | 3_4:+78389810 | Msa0524840:CDS |
GTGTTCCGGCTGATAGTTCT+TGG | 0.298741 | 3_4:+78387006 | Msa0524840:CDS |
CATTAACCGTGAGACTTATC+TGG | 0.303947 | 3_4:+78387155 | Msa0524840:CDS |
CAGAATTGAAGTAGTGAAAA+TGG | 0.304335 | 3_4:-78390144 | None:intergenic |
TGTGGTATGCAGGTGTTCTT+AGG | 0.305393 | 3_4:+78387936 | Msa0524840:intron |
GGTGGAGAAACGAGCAGTTT+TGG | 0.306946 | 3_4:+78390201 | Msa0524840:CDS |
CAATAATAGCAAAGCTCTTA+AGG | 0.307530 | 3_4:+78388453 | Msa0524840:CDS |
CAATTTCCGCAGAGATTTGA+TGG | 0.308394 | 3_4:+78388529 | Msa0524840:CDS |
CAATCTGTCCGAACTACTTC+TGG | 0.316657 | 3_4:+78385909 | Msa0524840:CDS |
CTTCAGTTATCTGTGAGATT+TGG | 0.320317 | 3_4:+78387088 | Msa0524840:CDS |
GTTCGGACAGATTGATTATC+AGG | 0.323657 | 3_4:-78385900 | None:intergenic |
CACAATATGGAAGCCTCTTC+CGG | 0.324269 | 3_4:+78384726 | Msa0524840:exon |
TTCTATATTCTCTTTGTTGT+GGG | 0.324824 | 3_4:+78390595 | Msa0524840:CDS |
GGACTTAAACTCATATGGTT+TGG | 0.327231 | 3_4:+78386102 | Msa0524840:CDS |
ATCGTGTTGTCATCGTGTTC+CGG | 0.328735 | 3_4:+78386992 | Msa0524840:CDS |
CACCAACCATTGTTATTGTC+TGG | 0.330309 | 3_4:+78390558 | Msa0524840:CDS |
GTACTTATTGTGAATTTGAT+AGG | 0.341544 | 3_4:+78390395 | Msa0524840:CDS |
CATCACTCTCTGTCACAATA+TGG | 0.342160 | 3_4:+78384713 | Msa0524840:exon |
GGGCTTCTCAAAGTGCTTGC+AGG | 0.342959 | 3_4:+78390266 | Msa0524840:CDS |
GACTTAAACTCATATGGTTT+GGG | 0.349610 | 3_4:+78386103 | Msa0524840:CDS |
TTCATGATGGATCCTGCTTA+TGG | 0.354746 | 3_4:+78388487 | Msa0524840:CDS |
TAAACAGTGGTTACCAATCT+TGG | 0.356541 | 3_4:+78390444 | Msa0524840:CDS |
AAAGCTCTTCTTTGCTATAT+GGG | 0.357334 | 3_4:+78390481 | Msa0524840:CDS |
AATTACTAAAACATTAATCT+TGG | 0.357923 | 3_4:-78391036 | None:intergenic |
TGGTTGCCTTGGATCAATAT+AGG | 0.363514 | 3_4:-78385967 | None:intergenic |
TCATAACAATCTCGACAAAC+AGG | 0.367078 | 3_4:-78385126 | None:intergenic |
TTGATGTCTCTAAATCAAAA+AGG | 0.370267 | 3_4:-78390722 | None:intergenic |
TCATTTATACCCTTTCTTGA+AGG | 0.370848 | 3_4:+78390511 | Msa0524840:CDS |
CTACTTCAATTCTGGAGCTT+AGG | 0.370914 | 3_4:+78390153 | Msa0524840:CDS |
CATTATTGTTAAGAGTTGTT+GGG | 0.375779 | 3_4:+78388869 | Msa0524840:CDS |
TCAAAGGACTTAAACTCATA+TGG | 0.375839 | 3_4:+78386097 | Msa0524840:CDS |
GGATCATCCTGGAATGATTC+AGG | 0.377094 | 3_4:+78387843 | Msa0524840:CDS |
TCTTGCTATGTATCTGATGA+TGG | 0.377670 | 3_4:+78387432 | Msa0524840:CDS |
CGAACTACTTCTGGTCCTTT+GGG | 0.379490 | 3_4:+78385918 | Msa0524840:CDS |
ACACGATGACAACACGATAA+GGG | 0.380330 | 3_4:-78386987 | None:intergenic |
GCCACCTCGTCCGGCATTCA+AGG | 0.383947 | 3_4:+78389753 | Msa0524840:CDS |
TTCTGAAGAAAATAAAATTC+AGG | 0.388075 | 3_4:-78387552 | None:intergenic |
CAATTCTACAACTCTTCTTA+AGG | 0.389540 | 3_4:+78389295 | Msa0524840:CDS |
CAACTCTTAACAATAATGTT+AGG | 0.389603 | 3_4:-78388864 | None:intergenic |
ACATTATTGTTAAGAGTTGT+TGG | 0.390179 | 3_4:+78388868 | Msa0524840:CDS |
CATTTATACCCTTTCTTGAA+GGG | 0.394919 | 3_4:+78390512 | Msa0524840:CDS |
CTTAAGAAGAGTTGTAGAAT+TGG | 0.397836 | 3_4:-78389294 | None:intergenic |
TGCATTGTCCAGCCTTCCTC+TGG | 0.400784 | 3_4:-78387787 | None:intergenic |
AAACAGTGGTTACCAATCTT+GGG | 0.401254 | 3_4:+78390445 | Msa0524840:CDS |
GAACTGGTTGCTGTTTCAAT+AGG | 0.402726 | 3_4:+78388793 | Msa0524840:CDS |
GGCCCTGTCTATGTGGGAAC+TGG | 0.402866 | 3_4:+78388777 | Msa0524840:CDS |
CAGGTGCTTCGGTGGGCCTT+GGG | 0.403218 | 3_4:+78389811 | Msa0524840:CDS |
GGCTGGAGCTATGAATGCTT+TGG | 0.405899 | 3_4:+78388052 | Msa0524840:CDS |
ACAGTGTTTGCAGTTACAAT+AGG | 0.406210 | 3_4:-78387369 | None:intergenic |
TGATCCCTGGGATTATTTCC+AGG | 0.406836 | 3_4:-78387826 | None:intergenic |
CAAATAGTGGACCCCAAGAT+TGG | 0.407938 | 3_4:-78390457 | None:intergenic |
CCCAAAAGACCCTTCAAGAA+AGG | 0.413353 | 3_4:-78390521 | None:intergenic |
GTTGATACCACACTGACTAT+TGG | 0.415397 | 3_4:-78390660 | None:intergenic |
TATTCTCTTTGTTGTGGGTG+AGG | 0.416062 | 3_4:+78390600 | Msa0524840:CDS |
TGTCCATTCAAATTCTTCAA+TGG | 0.418001 | 3_4:-78385024 | None:intergenic |
ATTGAAGGGACTGGTTCTAA+TGG | 0.418168 | 3_4:+78386232 | Msa0524840:CDS |
CGATCTGCGTTCAGATATAC+AGG | 0.421846 | 3_4:-78384663 | None:intergenic |
CTTCTATATTCTCTTTGTTG+TGG | 0.423346 | 3_4:+78390594 | Msa0524840:CDS |
AACAAGCTCGTTACGATTGT+GGG | 0.423362 | 3_4:-78384763 | None:intergenic |
TTCAATAGGCAAGCTTTGTA+TGG | 0.426485 | 3_4:+78388807 | Msa0524840:CDS |
ACTATTGGATGATGATTTGT+TGG | 0.429140 | 3_4:-78390645 | None:intergenic |
AGATAAGTCTCACGGTTAAT+GGG | 0.429796 | 3_4:-78387153 | None:intergenic |
CGTAATACCTGAATCATTCC+AGG | 0.429868 | 3_4:-78387850 | None:intergenic |
GTCACGATTCTGCCGACAGC+GGG | 0.430935 | 3_4:+78384793 | Msa0524840:CDS |
GGTTGCCTTGGATCAATATA+GGG | 0.431455 | 3_4:-78385966 | None:intergenic |
CTGAGCTATACGTGTTCAAA+TGG | 0.432318 | 3_4:+78390345 | Msa0524840:CDS |
AAGAAGAGCTTTCCAAATAG+TGG | 0.434325 | 3_4:-78390470 | None:intergenic |
CTATTGCATGCCACCTCGTC+CGG | 0.435125 | 3_4:+78389744 | Msa0524840:CDS |
AAGAGCTTGGAGAAGCGTTT+CGG | 0.436107 | 3_4:+78389212 | Msa0524840:CDS |
CAATAGAGATCTTCCTTAGC+AGG | 0.441321 | 3_4:+78389836 | Msa0524840:CDS |
AAGCAATGGGATTGAGGTAA+AGG | 0.441416 | 3_4:-78389938 | None:intergenic |
AACACGATGACAACACGATA+AGG | 0.448331 | 3_4:-78386988 | None:intergenic |
AGAAGATGCCAGAGGAAGGC+TGG | 0.449789 | 3_4:+78387779 | Msa0524840:CDS |
AAATAAAATTCAGGTGCTCT+TGG | 0.450426 | 3_4:-78387543 | None:intergenic |
TTCTTGTGATGTTGGAAGCC+TGG | 0.450509 | 3_4:-78388029 | None:intergenic |
CCATTGTAGCCATACCATAA+AGG | 0.451492 | 3_4:-78389865 | None:intergenic |
ACCGTCTCAATCAGGTGCTT+CGG | 0.452266 | 3_4:+78389800 | Msa0524840:CDS |
CAACCAGTTCCCACATAGAC+AGG | 0.454853 | 3_4:-78388780 | None:intergenic |
ATCTGGAGAGGCTTGCCATA+AGG | 0.458191 | 3_4:+78387172 | Msa0524840:CDS |
AAACCATTGAAGAATTTGAA+TGG | 0.458648 | 3_4:+78385021 | Msa0524840:CDS |
AGATCTTCCTCAGTCAAAAC+AGG | 0.459144 | 3_4:-78388837 | None:intergenic |
CATGTCTTCTTTCCATAAGC+AGG | 0.459266 | 3_4:-78388499 | None:intergenic |
CTTCTGAGCTTTAGCAACAT+AGG | 0.459632 | 3_4:-78387761 | None:intergenic |
AGCAATGGGATTGAGGTAAA+GGG | 0.460663 | 3_4:-78389937 | None:intergenic |
GCCAGCAACCATGCCGGAAG+AGG | 0.463003 | 3_4:-78384739 | None:intergenic |
CTTGGCCTGGAAATAATCCC+AGG | 0.464926 | 3_4:+78387821 | Msa0524840:CDS |
TAGTGAAAATGGAGGTAAAG+AGG | 0.465958 | 3_4:-78390133 | None:intergenic |
CTCCAGCCTTCTTGTGATGT+TGG | 0.467134 | 3_4:-78388037 | None:intergenic |
GGTCAGCTGAGATGAAGAAA+TGG | 0.467573 | 3_4:-78386965 | None:intergenic |
ATGGGTACAATCCGACTCAT+AGG | 0.468042 | 3_4:-78386946 | None:intergenic |
ATATCCTCCATATTAAATAT+GGG | 0.468622 | 3_4:-78388972 | None:intergenic |
TGTTGGGGTTCTAGAAAGAA+AGG | 0.469786 | 3_4:+78388885 | Msa0524840:CDS |
GAGACGGTCTGAAAGATTGA+TGG | 0.469848 | 3_4:-78389785 | None:intergenic |
GAAGCGTTTCGGACAGTCTC+CGG | 0.470838 | 3_4:+78389223 | Msa0524840:CDS |
ACCAACCATTGTTATTGTCT+GGG | 0.471579 | 3_4:+78390559 | Msa0524840:CDS |
TCTTTCAGACCGTCTCAATC+AGG | 0.471616 | 3_4:+78389792 | Msa0524840:CDS |
AGCACTATACCTGGTTGCCT+TGG | 0.471870 | 3_4:-78385978 | None:intergenic |
CAAAGGCAAATGACGAAGAC+GGG | 0.472073 | 3_4:+78390315 | Msa0524840:CDS |
GGAAGGAAAGGGTTGAAGGT+TGG | 0.478024 | 3_4:+78386137 | Msa0524840:CDS |
GTCATTTGCCTTTGATGTAA+CGG | 0.478885 | 3_4:-78390306 | None:intergenic |
CAGGATGGAACTCCTTGGCC+TGG | 0.479035 | 3_4:+78387808 | Msa0524840:CDS |
GTTGTAGAATTGGTTGAAGG+TGG | 0.481332 | 3_4:-78389284 | None:intergenic |
CTATTGGATGATGATTTGTT+GGG | 0.483405 | 3_4:-78390644 | None:intergenic |
ATTTAATATGGAGGATATAG+AGG | 0.485050 | 3_4:+78388977 | Msa0524840:CDS |
AAACTCGGCTGTTTCAGATA+AGG | 0.490058 | 3_4:-78387478 | None:intergenic |
AGAGTTGTAGAATTGGTTGA+AGG | 0.490811 | 3_4:-78389287 | None:intergenic |
TGTGAATTTGATAGGTATTG+TGG | 0.491287 | 3_4:+78390403 | Msa0524840:CDS |
GTCTCAATCAGGTGCTTCGG+TGG | 0.494067 | 3_4:+78389803 | Msa0524840:CDS |
GACTGGAAGGAAAGGGTTGA+AGG | 0.495484 | 3_4:+78386133 | Msa0524840:CDS |
CTTCAATTCTGGAGCTTAGG+TGG | 0.495786 | 3_4:+78390156 | Msa0524840:CDS |
GAACAAGCTCGTTACGATTG+TGG | 0.496218 | 3_4:-78384764 | None:intergenic |
CCAAAAGACCCTTCAAGAAA+GGG | 0.497486 | 3_4:-78390520 | None:intergenic |
CCAGATCAACTTGAAAGGTC+AGG | 0.497960 | 3_4:+78388743 | Msa0524840:intron |
CCAAAGGACCAGAAGTAGTT+CGG | 0.499714 | 3_4:-78385917 | None:intergenic |
AGGCATTGTCCTTTATGGTA+TGG | 0.500564 | 3_4:+78389856 | Msa0524840:CDS |
AATATGAAGAATTCAAAGTA+AGG | 0.503429 | 3_4:+78387731 | Msa0524840:CDS |
AAGGATTACAGTTTGGCCAT+TGG | 0.503990 | 3_4:-78385481 | None:intergenic |
TTCACAATAAGTACTGTTGT+AGG | 0.505494 | 3_4:-78390386 | None:intergenic |
ACGAGACACATAAACAAGCC+TGG | 0.506083 | 3_4:-78387997 | None:intergenic |
GGAGGCTATGTGTTTCATGA+TGG | 0.506640 | 3_4:+78388474 | Msa0524840:CDS |
CACCCACATCTTTGCAAACT+CGG | 0.507465 | 3_4:-78387493 | None:intergenic |
TCATCATCTCCATCGACTCT+AGG | 0.507830 | 3_4:-78385309 | None:intergenic |
GTTATGAAGACAAGACAGAA+TGG | 0.508195 | 3_4:+78389342 | Msa0524840:CDS |
TCGTCGCTCCTTAACAAAAG+AGG | 0.508659 | 3_4:-78387604 | None:intergenic |
TATGAATATGAGCGAAAAGA+AGG | 0.509434 | 3_4:+78385144 | Msa0524840:CDS |
GGCTTCTCAAAGTGCTTGCA+GGG | 0.510259 | 3_4:+78390267 | Msa0524840:CDS |
AATTAGTATTGACAGATGTC+TGG | 0.510676 | 3_4:+78385864 | Msa0524840:intron |
GCACACAGTACGCAAGCAAT+GGG | 0.511664 | 3_4:-78389951 | None:intergenic |
CGACAAAGGAGTATATGATA+AGG | 0.512710 | 3_4:-78391086 | None:intergenic |
TTTGTTGGGATCAGAGATGA+AGG | 0.512730 | 3_4:-78390630 | None:intergenic |
AATGCAAAACTAGATACAAA+AGG | 0.514508 | 3_4:+78385184 | Msa0524840:CDS |
TAGAAACAAGAATGCTATGC+AGG | 0.514553 | 3_4:-78390831 | None:intergenic |
TTTGTTGCTTGTAATGAATG+TGG | 0.517856 | 3_4:+78385099 | Msa0524840:CDS |
AAAGGTCAGGATGGTATTCA+GGG | 0.519336 | 3_4:+78388756 | Msa0524840:CDS |
TCTAATGTCTCAGAAGAGCT+TGG | 0.520171 | 3_4:+78389199 | Msa0524840:CDS |
TAGCAAGAAACCTTGTCGAC+AGG | 0.521061 | 3_4:-78387417 | None:intergenic |
TGGAAACTGATCCAAAATCC+AGG | 0.523796 | 3_4:-78387121 | None:intergenic |
TTAAGATGCATGCACGTGGT+TGG | 0.524436 | 3_4:+78389713 | Msa0524840:intron |
CCTTTATGGTATGGCTACAA+TGG | 0.524681 | 3_4:+78389865 | Msa0524840:CDS |
CTCCATATTAAATATGGGAA+TGG | 0.526287 | 3_4:-78388967 | None:intergenic |
GAGCTTAGGTGGAGTGGTGT+TGG | 0.527750 | 3_4:+78390167 | Msa0524840:CDS |
AGTGAGTGAGCTTTCTCAGA+TGG | 0.527989 | 3_4:-78385942 | None:intergenic |
CAGAGAGTGATGCAGATGAA+TGG | 0.528384 | 3_4:-78384702 | None:intergenic |
TTATGAAGACAAGACAGAAT+GGG | 0.529723 | 3_4:+78389343 | Msa0524840:CDS |
TACAGTTCCGGTGAGAATTG+TGG | 0.530491 | 3_4:+78386069 | Msa0524840:intron |
ATAAAGGACAATGCCTGCTA+AGG | 0.530638 | 3_4:-78389849 | None:intergenic |
GATGAGGCCTCTCATGAGGC+TGG | 0.531213 | 3_4:+78389891 | Msa0524840:CDS |
CAATGCAGGATGGAACTCCT+TGG | 0.533087 | 3_4:+78387803 | Msa0524840:CDS |
GAAGAAGACAATATTGCGAT+TGG | 0.533132 | 3_4:-78388575 | None:intergenic |
GATATAGAGGAGGGTGTCGA+AGG | 0.533539 | 3_4:+78388990 | Msa0524840:CDS |
GTTTCTGCTGTCTTGACCAA+CGG | 0.535214 | 3_4:+78388394 | Msa0524840:CDS |
TAAGGAGCGACGAGCAATGA+AGG | 0.537145 | 3_4:+78387614 | Msa0524840:CDS |
TGGCAGGTTATGATGATGAA+AGG | 0.538099 | 3_4:+78389171 | Msa0524840:intron |
ATTATTGTTAAGAGTTGTTG+GGG | 0.538462 | 3_4:+78388870 | Msa0524840:CDS |
CATATATGTGGTGAGGATGT+TGG | 0.538983 | 3_4:+78385054 | Msa0524840:CDS |
TATTCAGGGCCCTGTCTATG+TGG | 0.539274 | 3_4:+78388770 | Msa0524840:CDS |
CCACCTCGTCCGGCATTCAA+GGG | 0.540494 | 3_4:+78389754 | Msa0524840:CDS |
AGCGGAGGAGGAGATATTGA+AGG | 0.541051 | 3_4:+78386217 | Msa0524840:CDS |
GTGAGTGAGCTTTCTCAGAT+GGG | 0.542714 | 3_4:-78385941 | None:intergenic |
AGCACACAGTACGCAAGCAA+TGG | 0.543002 | 3_4:-78389952 | None:intergenic |
GCTGATGGGAAAAGCGGAGG+AGG | 0.543579 | 3_4:+78386205 | Msa0524840:CDS |
TGGCCATTGGTGAGAAGAGG+AGG | 0.543739 | 3_4:-78385468 | None:intergenic |
CATATTAAATATGGGAATGG+TGG | 0.544392 | 3_4:-78388964 | None:intergenic |
TATGGTATGGCTACAATGGA+AGG | 0.544960 | 3_4:+78389869 | Msa0524840:CDS |
ATCATTCCAGGATGATCCCT+GGG | 0.546093 | 3_4:-78387838 | None:intergenic |
TTCCAACATCACAAGAAGGC+TGG | 0.547234 | 3_4:+78388035 | Msa0524840:CDS |
AATAATCCCAGGGATCATCC+TGG | 0.549110 | 3_4:+78387832 | Msa0524840:CDS |
ATGGTTTGGGAAATGTTGAC+TGG | 0.549411 | 3_4:+78386116 | Msa0524840:CDS |
GTCAGCTGAGATGAAGAAAT+GGG | 0.549519 | 3_4:-78386964 | None:intergenic |
ACAAGGTGCAATGTGATGAT+TGG | 0.550221 | 3_4:+78390930 | Msa0524840:three_prime_UTR |
TAGAATTGGTTGAAGGTGGA+AGG | 0.551173 | 3_4:-78389280 | None:intergenic |
AGAGGAAGGCTGGACAATGC+AGG | 0.552063 | 3_4:+78387789 | Msa0524840:CDS |
GGAGGAGATATTGAAGGGAC+TGG | 0.553921 | 3_4:+78386223 | Msa0524840:CDS |
GTGGTGTTGGTATAGAAGAC+TGG | 0.554915 | 3_4:+78390180 | Msa0524840:CDS |
GAACCCTTGAATGCCGGACG+AGG | 0.555094 | 3_4:-78389757 | None:intergenic |
GTGTCTCGTGAAAAGCGACC+AGG | 0.555283 | 3_4:+78388011 | Msa0524840:CDS |
GTACTGACAAATACGTCGAC+AGG | 0.555484 | 3_4:-78387324 | None:intergenic |
CTGGGATTATTTCCAGGCCA+AGG | 0.555806 | 3_4:-78387820 | None:intergenic |
ACAATAGGTGGCTCTTTGAG+AGG | 0.557014 | 3_4:-78387354 | None:intergenic |
CAGCCGAGTTTGCAAAGATG+TGG | 0.557850 | 3_4:+78387490 | Msa0524840:CDS |
CATTCCCATATTTAATATGG+AGG | 0.558239 | 3_4:+78388968 | Msa0524840:CDS |
TCTCAATCAGGTGCTTCGGT+GGG | 0.558685 | 3_4:+78389804 | Msa0524840:CDS |
GCAATCCACGTTATCAGTTG+TGG | 0.559514 | 3_4:+78389320 | Msa0524840:CDS |
AAGGGTGGGAATAAGAAGTA+CGG | 0.561091 | 3_4:+78388909 | Msa0524840:CDS |
ATTCTGGAGCTTAGGTGGAG+TGG | 0.561581 | 3_4:+78390161 | Msa0524840:CDS |
ATTCAGGGCCCTGTCTATGT+GGG | 0.562278 | 3_4:+78388771 | Msa0524840:CDS |
CACTTCCCTATATTGATCCA+AGG | 0.563873 | 3_4:+78385961 | Msa0524840:CDS |
GGAGCAGAACCCTTGAATGC+CGG | 0.564720 | 3_4:-78389763 | None:intergenic |
CGTCGCTCCTTAACAAAAGA+GGG | 0.564871 | 3_4:-78387603 | None:intergenic |
TCAGGGAGTCCTAGAGTCGA+TGG | 0.565975 | 3_4:+78385300 | Msa0524840:intron |
GTACGCAAGCAATGGGATTG+AGG | 0.569333 | 3_4:-78389944 | None:intergenic |
CAGATGGCAATGAACTTCCC+AGG | 0.570271 | 3_4:+78387979 | Msa0524840:CDS |
CGAGACACATAAACAAGCCT+GGG | 0.571703 | 3_4:-78387996 | None:intergenic |
CACGATGACAACACGATAAG+GGG | 0.571798 | 3_4:-78386986 | None:intergenic |
GAAGTACGGTGACAAGAAGA+GGG | 0.571885 | 3_4:+78388923 | Msa0524840:CDS |
CTTGATGATCAGAGTTGTGT+TGG | 0.572655 | 3_4:+78391010 | Msa0524840:three_prime_UTR |
AATCATTCCAGGATGATCCC+TGG | 0.573033 | 3_4:-78387839 | None:intergenic |
AGCAAGAAACCTTGTCGACA+GGG | 0.574017 | 3_4:-78387416 | None:intergenic |
AGAAGTACGGTGACAAGAAG+AGG | 0.574021 | 3_4:+78388922 | Msa0524840:CDS |
TAAGTAACTTTGCTAGCATG+TGG | 0.574212 | 3_4:+78390102 | Msa0524840:CDS |
ACAATAAGTACTGTTGTAGG+AGG | 0.576226 | 3_4:-78390383 | None:intergenic |
TTTGTGAGAAGACAAAATGC+AGG | 0.576962 | 3_4:-78389976 | None:intergenic |
AGACGGTCTGAAAGATTGAT+GGG | 0.577367 | 3_4:-78389784 | None:intergenic |
CAACCTCCTCTTCTCACCAA+TGG | 0.578750 | 3_4:+78385465 | Msa0524840:CDS |
GAAGATCTCTATTGAACCCA+AGG | 0.579561 | 3_4:-78389827 | None:intergenic |
CAATAGGTGGCTCTTTGAGA+GGG | 0.582620 | 3_4:-78387353 | None:intergenic |
GAGAATTGTGGATCCATCAA+AGG | 0.584083 | 3_4:+78386081 | Msa0524840:CDS |
GTTTGGCCATTGGTGAGAAG+AGG | 0.584350 | 3_4:-78385471 | None:intergenic |
ATCTGCCAGATCAACTTGAA+AGG | 0.584622 | 3_4:+78388738 | Msa0524840:intron |
GTGTTTGCAGTTACAATAGG+TGG | 0.584815 | 3_4:-78387366 | None:intergenic |
GAAATGTTGACTGGAAGGAA+AGG | 0.585668 | 3_4:+78386125 | Msa0524840:CDS |
AGGTGCAATGTGATGATTGG+TGG | 0.585745 | 3_4:+78390933 | Msa0524840:three_prime_UTR |
GAATATAGAAGCAAGGAGAA+CGG | 0.587222 | 3_4:-78390582 | None:intergenic |
TATATTGATCCAAGGCAACC+AGG | 0.590258 | 3_4:+78385969 | Msa0524840:CDS |
TGATGGAGAACCATCACAGT+TGG | 0.592603 | 3_4:+78387299 | Msa0524840:CDS |
CCCTTGAATGCCGGACGAGG+TGG | 0.594733 | 3_4:-78389754 | None:intergenic |
CATAACAATCTCGACAAACA+GGG | 0.595414 | 3_4:-78385125 | None:intergenic |
AAATGTTGACTGGAAGGAAA+GGG | 0.595770 | 3_4:+78386126 | Msa0524840:CDS |
AATTTGATAGGTATTGTGGC+TGG | 0.596798 | 3_4:+78390407 | Msa0524840:CDS |
TCAAAGGCAAATGACGAAGA+CGG | 0.596841 | 3_4:+78390314 | Msa0524840:CDS |
AAGAACACAAACACAAACAC+TGG | 0.596999 | 3_4:+78384535 | Msa0524840:five_prime_UTR |
GCCCAGACAATAACAATGGT+TGG | 0.597212 | 3_4:-78390560 | None:intergenic |
GCCTCTCCAGATAAGTCTCA+CGG | 0.598956 | 3_4:-78387161 | None:intergenic |
GATTGATTACTTAAAGGACA+AGG | 0.599814 | 3_4:+78387575 | Msa0524840:CDS |
ATGGCTACAATGGAAGGATG+AGG | 0.601544 | 3_4:+78389875 | Msa0524840:CDS |
TGTTGGGATCAGAGATGAAG+GGG | 0.603228 | 3_4:-78390628 | None:intergenic |
TGTTGACTACCCTGTCGACA+AGG | 0.603351 | 3_4:+78387407 | Msa0524840:CDS |
ACGAGGTGGCATGCAATAGA+CGG | 0.603755 | 3_4:-78389740 | None:intergenic |
TATGGAAGCCTCTTCCGGCA+TGG | 0.605750 | 3_4:+78384731 | Msa0524840:exon |
ACAAAGAGAATATAGAAGCA+AGG | 0.606102 | 3_4:-78390589 | None:intergenic |
TTGTTGGGATCAGAGATGAA+GGG | 0.606995 | 3_4:-78390629 | None:intergenic |
CATAACCACAACTGATAACG+TGG | 0.607386 | 3_4:-78389325 | None:intergenic |
GGTTCTAGAAAGAAAGGAAA+GGG | 0.607535 | 3_4:+78388891 | Msa0524840:CDS |
GTGGGAGCCAGCAACCATGC+CGG | 0.607689 | 3_4:-78384745 | None:intergenic |
TAATAAGTCAAGGAGACAGT+GGG | 0.609464 | 3_4:+78385398 | Msa0524840:CDS |
TTTGAGAAGCCCTTGAAACA+CGG | 0.610286 | 3_4:-78390255 | None:intergenic |
GCTCAGAAGATGCCAGAGGA+AGG | 0.610967 | 3_4:+78387775 | Msa0524840:CDS |
ACAGATTGATTATCAGGTGT+AGG | 0.612850 | 3_4:-78385894 | None:intergenic |
GAAGGATGAGGCCTCTCATG+AGG | 0.613208 | 3_4:+78389887 | Msa0524840:CDS |
GATGGATCCACAATTCTCAC+CGG | 0.614223 | 3_4:-78386076 | None:intergenic |
AAACAAATTTATTATTCCCG+AGG | 0.615273 | 3_4:+78389996 | Msa0524840:CDS |
AATATGGAGGATATAGAGGA+GGG | 0.615452 | 3_4:+78388981 | Msa0524840:CDS |
AGCCGAGTTTGCAAAGATGT+GGG | 0.615569 | 3_4:+78387491 | Msa0524840:CDS |
GCCACCTTGCTCCATGAATG+TGG | 0.615815 | 3_4:-78389258 | None:intergenic |
AGCAACAAACACATCACCGG+TGG | 0.617704 | 3_4:-78385085 | None:intergenic |
TCTAGAAAGAAAGGAAAGGG+TGG | 0.618649 | 3_4:+78388894 | Msa0524840:CDS |
CTAGAAAGAAAGGAAAGGGT+GGG | 0.618776 | 3_4:+78388895 | Msa0524840:CDS |
TGTTCTTAGGACATAGTGGA+GGG | 0.619289 | 3_4:+78387949 | Msa0524840:CDS |
TAATATGGAGGATATAGAGG+AGG | 0.620075 | 3_4:+78388980 | Msa0524840:CDS |
AGAAACCAAGAACTATCAGC+CGG | 0.622521 | 3_4:-78387011 | None:intergenic |
ACCGTGAGACTTATCTGGAG+AGG | 0.622664 | 3_4:+78387160 | Msa0524840:CDS |
AACAGTGGTTACCAATCTTG+GGG | 0.623077 | 3_4:+78390446 | Msa0524840:CDS |
TCGACAGGAGCCAACTGTGA+TGG | 0.623093 | 3_4:-78387309 | None:intergenic |
ATTCAAAAGATATGCACCGT+TGG | 0.623304 | 3_4:-78388410 | None:intergenic |
GCGGAGGAGGAGATATTGAA+GGG | 0.624669 | 3_4:+78386218 | Msa0524840:CDS |
AGTGGAGGGCTTGATACAGA+TGG | 0.624800 | 3_4:+78387963 | Msa0524840:CDS |
TAAGAAACTAACCCCGCTGT+CGG | 0.625109 | 3_4:-78384805 | None:intergenic |
GAATATAGTTAAAGCAAACA+AGG | 0.625898 | 3_4:+78390913 | Msa0524840:three_prime_UTR |
GGGTTCTAGAAAGAAAGGAA+AGG | 0.630688 | 3_4:+78388890 | Msa0524840:CDS |
GTGTTCTTAGGACATAGTGG+AGG | 0.631279 | 3_4:+78387948 | Msa0524840:CDS |
TAACTGAAGTCAACCACAGT+GGG | 0.631451 | 3_4:-78387074 | None:intergenic |
GAAGGCTGGACAATGCAGGA+TGG | 0.631903 | 3_4:+78387793 | Msa0524840:CDS |
GCTTTCTCAGATGGGCCCAA+AGG | 0.632920 | 3_4:-78385933 | None:intergenic |
AGATATGCTGATGGGAAAAG+CGG | 0.635238 | 3_4:+78386199 | Msa0524840:CDS |
GCAATGGGATTGAGGTAAAG+GGG | 0.636175 | 3_4:-78389936 | None:intergenic |
ACAAGCAACAAACACATCAC+CGG | 0.638010 | 3_4:-78385088 | None:intergenic |
CAGGTGTTCTTAGGACATAG+TGG | 0.638632 | 3_4:+78387945 | Msa0524840:intron |
GGACAAGTCTGTCATATATG+TGG | 0.638984 | 3_4:+78385042 | Msa0524840:CDS |
GCTGCCACATTCATGGAGCA+AGG | 0.639358 | 3_4:+78389254 | Msa0524840:CDS |
ATCAACTTGAAAGGTCAGGA+TGG | 0.639743 | 3_4:+78388747 | Msa0524840:CDS |
AGGCTTCCAACATCACAAGA+AGG | 0.642291 | 3_4:+78388031 | Msa0524840:CDS |
ATGCTCGACAACCTATGAGT+CGG | 0.642320 | 3_4:+78386935 | Msa0524840:CDS |
ATGACTGGTAGATATGCTGA+TGG | 0.642913 | 3_4:+78386190 | Msa0524840:CDS |
TTGTGTAGATATGATCGTGA+TGG | 0.643761 | 3_4:+78387282 | Msa0524840:intron |
GATGTTGGAACAACACCCAC+CGG | 0.644734 | 3_4:+78385069 | Msa0524840:CDS |
CAAGACAGAATGGGGCAAAG+AGG | 0.645256 | 3_4:+78389352 | Msa0524840:CDS |
TTTGGGAAATGTTGACTGGA+AGG | 0.645984 | 3_4:+78386120 | Msa0524840:CDS |
TATGAAGACAAGACAGAATG+GGG | 0.646123 | 3_4:+78389344 | Msa0524840:CDS |
GCAATATCGTGTAACTCACC+CGG | 0.646970 | 3_4:+78387038 | Msa0524840:CDS |
ACTAGATACAAAAGGCTCAG+AGG | 0.647746 | 3_4:+78385192 | Msa0524840:CDS |
TTGGCCTGGAAATAATCCCA+GGG | 0.648298 | 3_4:+78387822 | Msa0524840:CDS |
AACGAGTTCAATTATCGACA+AGG | 0.650849 | 3_4:+78385357 | Msa0524840:CDS |
CGTCACGATTCTGCCGACAG+CGG | 0.656503 | 3_4:+78384792 | Msa0524840:CDS |
CAATAAGTACTGTTGTAGGA+GGG | 0.656712 | 3_4:-78390382 | None:intergenic |
ATATAAGCCAGCCTCATGAG+AGG | 0.657496 | 3_4:-78389898 | None:intergenic |
ATAATAAGTCAAGGAGACAG+TGG | 0.658283 | 3_4:+78385397 | Msa0524840:CDS |
TATGCTGATGGGAAAAGCGG+AGG | 0.658844 | 3_4:+78386202 | Msa0524840:CDS |
TAATAGCAAAGCTCTTAAGG+AGG | 0.661440 | 3_4:+78388456 | Msa0524840:CDS |
ACCGAAGCACCTGATTGAGA+CGG | 0.666058 | 3_4:-78389801 | None:intergenic |
GGGTTTAAGATGCATGCACG+TGG | 0.666379 | 3_4:+78389709 | Msa0524840:intron |
AACCAGTTCCCACATAGACA+GGG | 0.673506 | 3_4:-78388779 | None:intergenic |
TCATCATCCAATAGTCAGTG+TGG | 0.679111 | 3_4:+78390653 | Msa0524840:CDS |
AAGTACGGTGACAAGAAGAG+GGG | 0.680559 | 3_4:+78388924 | Msa0524840:CDS |
CGACGTATTTGTCAGTACAG+TGG | 0.685009 | 3_4:+78387329 | Msa0524840:CDS |
GTGTTGGTATAGAAGACTGG+TGG | 0.690105 | 3_4:+78390183 | Msa0524840:CDS |
AAAGGCAAATGACGAAGACG+GGG | 0.691426 | 3_4:+78390316 | Msa0524840:CDS |
GCAACAAACACATCACCGGT+GGG | 0.693813 | 3_4:-78385084 | None:intergenic |
TAAAAGATGCTTACCCACTG+TGG | 0.694404 | 3_4:+78387061 | Msa0524840:CDS |
AACGGCCCAGACAATAACAA+TGG | 0.695469 | 3_4:-78390564 | None:intergenic |
GCCACATTCATGGAGCAAGG+TGG | 0.698768 | 3_4:+78389257 | Msa0524840:CDS |
TGACTGGTAGATATGCTGAT+GGG | 0.702596 | 3_4:+78386191 | Msa0524840:CDS |
AATTGAAGTAGTGAAAATGG+AGG | 0.704707 | 3_4:-78390141 | None:intergenic |
ATATAAACAAGAATTCAGCA+TGG | 0.707778 | 3_4:+78390759 | Msa0524840:three_prime_UTR |
AGTCTGTCATATATGTGGTG+AGG | 0.712202 | 3_4:+78385047 | Msa0524840:CDS |
TAAAGCTCAGAAGATGCCAG+AGG | 0.718369 | 3_4:+78387771 | Msa0524840:CDS |
TCACGATTCTGCCGACAGCG+GGG | 0.734794 | 3_4:+78384794 | Msa0524840:CDS |
TCAATGCCATCAAATCTCTG+CGG | 0.757536 | 3_4:-78388535 | None:intergenic |
ATAACTGAAGTCAACCACAG+TGG | 0.769108 | 3_4:-78387075 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAATAATAATAAGTCA+AGG | + | chr3_4:78385388-78385407 | Msa0524840:CDS | 10.0% |
!!! | AACTTATTACTTTTTTTTTT+GGG | + | chr3_4:78385610-78385629 | Msa0524840:intron | 10.0% |
!!! | AATATTTTTTTATTTTGAAG+GGG | - | chr3_4:78388667-78388686 | None:intergenic | 10.0% |
!! | TTTCTAAATATGTTTACATT+TGG | + | chr3_4:78385528-78385547 | Msa0524840:intron | 15.0% |
!! | TTCTAAATATGTTTACATTT+GGG | + | chr3_4:78385529-78385548 | Msa0524840:intron | 15.0% |
!!! | GAACTTATTACTTTTTTTTT+TGG | + | chr3_4:78385609-78385628 | Msa0524840:intron | 15.0% |
!! | GTTTACTTTAAATATTTACT+TGG | + | chr3_4:78386854-78386873 | Msa0524840:intron | 15.0% |
!!! | AATTTCATTTCAAGTTAAAA+TGG | + | chr3_4:78386881-78386900 | Msa0524840:intron | 15.0% |
!! | ACATGTAGAAATATTAAATA+TGG | + | chr3_4:78387687-78387706 | Msa0524840:intron | 15.0% |
!! | TAAACTGAAAATAACAATAA+TGG | - | chr3_4:78387904-78387923 | None:intergenic | 15.0% |
!!! | AGTTTACTTATATTATTTTG+TGG | + | chr3_4:78387918-78387937 | Msa0524840:intron | 15.0% |
!! | ATAAAATAAGAAGTTTCAAT+AGG | - | chr3_4:78388083-78388102 | None:intergenic | 15.0% |
!! | AATTACTAAAACATTAATCT+TGG | - | chr3_4:78391039-78391058 | None:intergenic | 15.0% |
!! | TTAATGCTATAATTCTAATC+TGG | + | chr3_4:78384939-78384958 | Msa0524840:intron | 20.0% |
!!! | TTGATTTTAAATGATGAATC+TGG | + | chr3_4:78385276-78385295 | Msa0524840:intron | 20.0% |
!! | TATATTTGATATTACAGTTC+CGG | + | chr3_4:78386057-78386076 | Msa0524840:intron | 20.0% |
!!! | AGGCTCAATTTATTTTTATA+TGG | + | chr3_4:78386362-78386381 | Msa0524840:intron | 20.0% |
!!! | TTTCTCATTATGACTTATTT+TGG | + | chr3_4:78386804-78386823 | Msa0524840:intron | 20.0% |
!!! | TTCTCATTATGACTTATTTT+GGG | + | chr3_4:78386805-78386824 | Msa0524840:intron | 20.0% |
!!! | TTCTGAAGAAAATAAAATTC+AGG | - | chr3_4:78387555-78387574 | None:intergenic | 20.0% |
!! | AATAAATATTGAACTGGAAA+TGG | - | chr3_4:78387662-78387681 | None:intergenic | 20.0% |
!! | TCTAGAAATAAATATTGAAC+TGG | - | chr3_4:78387668-78387687 | None:intergenic | 20.0% |
!! | AATATGAAGAATTCAAAGTA+AGG | + | chr3_4:78387731-78387750 | Msa0524840:CDS | 20.0% |
!!! | GTGCTTTTTATTTATTAGAT+AGG | + | chr3_4:78388324-78388343 | Msa0524840:intron | 20.0% |
!! | ATATCCTCCATATTAAATAT+GGG | - | chr3_4:78388975-78388994 | None:intergenic | 20.0% |
!! | TATATCCTCCATATTAAATA+TGG | - | chr3_4:78388976-78388995 | None:intergenic | 20.0% |
!!! | CATTTTTTTAGACAAATCTA+AGG | - | chr3_4:78389135-78389154 | None:intergenic | 20.0% |
!!! | AATGATATTACAATGTCTTT+TGG | + | chr3_4:78389151-78389170 | Msa0524840:intron | 20.0% |
!! | GAATAATTTCTTTATACCAA+AGG | - | chr3_4:78389416-78389435 | None:intergenic | 20.0% |
!!! | GTTTAATTTTGATACATTGT+GGG | - | chr3_4:78389586-78389605 | None:intergenic | 20.0% |
!!! | AGTTTAATTTTGATACATTG+TGG | - | chr3_4:78389587-78389606 | None:intergenic | 20.0% |
!!! | TAAACAAATTTTACATTACG+TGG | - | chr3_4:78390887-78390906 | None:intergenic | 20.0% |
!! | TTGATCTTCAACTTTTTATC+AGG | + | chr3_4:78384906-78384925 | Msa0524840:intron | 25.0% |
! | TTCAAATTCTTCAATGGTTT+CGG | - | chr3_4:78385021-78385040 | None:intergenic | 25.0% |
! | AAACCATTGAAGAATTTGAA+TGG | + | chr3_4:78385021-78385040 | Msa0524840:CDS | 25.0% |
! | AATGCAAAACTAGATACAAA+AGG | + | chr3_4:78385184-78385203 | Msa0524840:CDS | 25.0% |
! | TAACAGTTGAATAGAATCAA+AGG | - | chr3_4:78385503-78385522 | None:intergenic | 25.0% |
! | TGATTCTATTCAACTGTTAT+AGG | + | chr3_4:78385504-78385523 | Msa0524840:intron | 25.0% |
!!! | TTCATCTTAACACTTTTTGA+CGG | - | chr3_4:78385592-78385611 | None:intergenic | 25.0% |
!!! | ATGTATTTCATGTTTTTTGC+AGG | + | chr3_4:78385779-78385798 | Msa0524840:intron | 25.0% |
! | TAATAAGATCAGATTGAGAA+TGG | + | chr3_4:78386503-78386522 | Msa0524840:intron | 25.0% |
! | AATAAGATCAGATTGAGAAT+GGG | + | chr3_4:78386504-78386523 | Msa0524840:intron | 25.0% |
! | TAGTGAAGATGTTAATGTTA+TGG | + | chr3_4:78386657-78386676 | Msa0524840:intron | 25.0% |
!!! | TTTTTTTTTTGGTGGACTTT+TGG | + | chr3_4:78386739-78386758 | Msa0524840:intron | 25.0% |
! | TGAGAAACATACATAACATT+AGG | - | chr3_4:78386791-78386810 | None:intergenic | 25.0% |
!!! | ATACTGTGTTTTTTGCAAAA+GGG | - | chr3_4:78387519-78387538 | None:intergenic | 25.0% |
!!! | AATACTGTGTTTTTTGCAAA+AGG | - | chr3_4:78387520-78387539 | None:intergenic | 25.0% |
! | TCAGAAGATTGATTACTTAA+AGG | + | chr3_4:78387569-78387588 | Msa0524840:CDS | 25.0% |
! | ACTGAAAATAACAATAATGG+TGG | - | chr3_4:78387901-78387920 | None:intergenic | 25.0% |
!!! | TATATTATTTTGTGGTATGC+AGG | + | chr3_4:78387926-78387945 | Msa0524840:intron | 25.0% |
!!! | TTCTTATTTTATGTGTTCCA+TGG | + | chr3_4:78388091-78388110 | Msa0524840:intron | 25.0% |
!!! | CTGGTTTATTTTCCTTTTAA+TGG | + | chr3_4:78388120-78388139 | Msa0524840:intron | 25.0% |
! | AATGAGAACAATACAAAACA+CGG | - | chr3_4:78388153-78388172 | None:intergenic | 25.0% |
! | AATCAACACAGTACAATTAT+AGG | + | chr3_4:78388232-78388251 | Msa0524840:intron | 25.0% |
!!! | CAAATTTCTAAAGCTTCTTT+AGG | + | chr3_4:78388265-78388284 | Msa0524840:intron | 25.0% |
! | CAACTCTTAACAATAATGTT+AGG | - | chr3_4:78388867-78388886 | None:intergenic | 25.0% |
! | ACATTATTGTTAAGAGTTGT+TGG | + | chr3_4:78388868-78388887 | Msa0524840:CDS | 25.0% |
! | CATTATTGTTAAGAGTTGTT+GGG | + | chr3_4:78388869-78388888 | Msa0524840:CDS | 25.0% |
! | ATTATTGTTAAGAGTTGTTG+GGG | + | chr3_4:78388870-78388889 | Msa0524840:CDS | 25.0% |
! | ATTTAATATGGAGGATATAG+AGG | + | chr3_4:78388977-78388996 | Msa0524840:CDS | 25.0% |
!! | TCATTTAACTCCCTTATTTA+CGG | + | chr3_4:78389035-78389054 | Msa0524840:intron | 25.0% |
! | ACATGAAAAACCGTAAATAA+GGG | - | chr3_4:78389048-78389067 | None:intergenic | 25.0% |
!!! | TGATGATTTTGATTGATTGA+CGG | - | chr3_4:78389473-78389492 | None:intergenic | 25.0% |
! | AAACAAATTTATTATTCCCG+AGG | + | chr3_4:78389996-78390015 | Msa0524840:CDS | 25.0% |
!!! | ATGATTTGTTCTCTCATTTT+TGG | + | chr3_4:78390022-78390041 | Msa0524840:intron | 25.0% |
!! | AAATTTTACCGTTACATCAA+AGG | + | chr3_4:78390298-78390317 | Msa0524840:CDS | 25.0% |
! | GTACTTATTGTGAATTTGAT+AGG | + | chr3_4:78390395-78390414 | Msa0524840:CDS | 25.0% |
!! | TTCTATATTCTCTTTGTTGT+GGG | + | chr3_4:78390595-78390614 | Msa0524840:CDS | 25.0% |
! | TTGATGTCTCTAAATCAAAA+AGG | - | chr3_4:78390725-78390744 | None:intergenic | 25.0% |
!!! | TTTTTGATTTAGAGACATCA+AGG | + | chr3_4:78390724-78390743 | Msa0524840:three_prime_UTR | 25.0% |
! | ATATAAACAAGAATTCAGCA+TGG | + | chr3_4:78390759-78390778 | Msa0524840:three_prime_UTR | 25.0% |
!!! | CCTATTTTTCATGCATTAAT+AGG | - | chr3_4:78390792-78390811 | None:intergenic | 25.0% |
! | CCTATTAATGCATGAAAAAT+AGG | + | chr3_4:78390789-78390808 | Msa0524840:three_prime_UTR | 25.0% |
! | TTAATGCATGAAAAATAGGA+CGG | + | chr3_4:78390793-78390812 | Msa0524840:three_prime_UTR | 25.0% |
! | GAATATAGTTAAAGCAAACA+AGG | + | chr3_4:78390913-78390932 | Msa0524840:three_prime_UTR | 25.0% |
!! | GTGTTTTTGTGAAATGAGAT+AGG | + | chr3_4:78384590-78384609 | Msa0524840:five_prime_UTR | 30.0% |
AAAAATATTGCGTGTTGAGT+GGG | + | chr3_4:78384621-78384640 | Msa0524840:five_prime_UTR | 30.0% | |
TTACAACTTTAGATCAGATC+TGG | + | chr3_4:78384861-78384880 | Msa0524840:intron | 30.0% | |
TGTCCATTCAAATTCTTCAA+TGG | - | chr3_4:78385027-78385046 | None:intergenic | 30.0% | |
! | TTTGTTGCTTGTAATGAATG+TGG | + | chr3_4:78385099-78385118 | Msa0524840:CDS | 30.0% |
TATGAATATGAGCGAAAAGA+AGG | + | chr3_4:78385144-78385163 | Msa0524840:CDS | 30.0% | |
!!! | TTGTATCTAGTTTTGCATTG+AGG | - | chr3_4:78385183-78385202 | None:intergenic | 30.0% |
TTAAATGATGAATCTGGATC+AGG | + | chr3_4:78385282-78385301 | Msa0524840:intron | 30.0% | |
TAAATGATGAATCTGGATCA+GGG | + | chr3_4:78385283-78385302 | Msa0524840:intron | 30.0% | |
AGAATCAAAGGATTACAGTT+TGG | - | chr3_4:78385491-78385510 | None:intergenic | 30.0% | |
ACACTGCATTATATATGCAA+GGG | - | chr3_4:78385707-78385726 | None:intergenic | 30.0% | |
!! | AATTAGTATTGACAGATGTC+TGG | + | chr3_4:78385864-78385883 | Msa0524840:intron | 30.0% |
TATGAGTTTAAGTCCTTTGA+TGG | - | chr3_4:78386097-78386116 | None:intergenic | 30.0% | |
TCAAAGGACTTAAACTCATA+TGG | + | chr3_4:78386097-78386116 | Msa0524840:CDS | 30.0% | |
GACTTAAACTCATATGGTTT+GGG | + | chr3_4:78386103-78386122 | Msa0524840:CDS | 30.0% | |
AAAAATATGGTACAGATGAC+TGG | + | chr3_4:78386175-78386194 | Msa0524840:CDS | 30.0% | |
ATCAAACCAAACAGAATAAG+TGG | - | chr3_4:78386278-78386297 | None:intergenic | 30.0% | |
TCATTGTTTGTTTATGCTAG+AGG | + | chr3_4:78386342-78386361 | Msa0524840:intron | 30.0% | |
! | AATTTTCATTCTCCTTCTCA+TGG | + | chr3_4:78386399-78386418 | Msa0524840:intron | 30.0% |
GATCAATACACTCTATTGTT+TGG | - | chr3_4:78386441-78386460 | None:intergenic | 30.0% | |
AATGGGATTGTTTAACCAAA+AGG | + | chr3_4:78386521-78386540 | Msa0524840:intron | 30.0% | |
ATGGGATTGTTTAACCAAAA+GGG | + | chr3_4:78386522-78386541 | Msa0524840:intron | 30.0% | |
!!! | TAACCAAAAGGGACATTTTT+TGG | + | chr3_4:78386533-78386552 | Msa0524840:intron | 30.0% |
!!! | AACCAAAAGGGACATTTTTT+GGG | + | chr3_4:78386534-78386553 | Msa0524840:intron | 30.0% |
GATCATCTATTTGCATATTG+AGG | + | chr3_4:78386574-78386593 | Msa0524840:intron | 30.0% | |
TGAAGATGTTAATGTTATGG+AGG | + | chr3_4:78386660-78386679 | Msa0524840:intron | 30.0% | |
CTGTCAAAAACAGAAACAAA+GGG | - | chr3_4:78386907-78386926 | None:intergenic | 30.0% | |
!!! | CTTTGTTTCTGTTTTTGACA+GGG | + | chr3_4:78386906-78386925 | Msa0524840:intron | 30.0% |
! | TTTTGGATCAGTTTCCAAAA+TGG | + | chr3_4:78387127-78387146 | Msa0524840:CDS | 30.0% |
ACAAGACAAACTAAGATTAG+TGG | - | chr3_4:78387266-78387285 | None:intergenic | 30.0% | |
AAATAAAATTCAGGTGCTCT+TGG | - | chr3_4:78387546-78387565 | None:intergenic | 30.0% | |
GATTGATTACTTAAAGGACA+AGG | + | chr3_4:78387575-78387594 | Msa0524840:CDS | 30.0% | |
GAAAATAACAATAATGGTGG+AGG | - | chr3_4:78387898-78387917 | None:intergenic | 30.0% | |
ATGAGAACAATACAAAACAC+GGG | - | chr3_4:78388152-78388171 | None:intergenic | 30.0% | |
ATGAAAAATAACCTGCTAAG+TGG | + | chr3_4:78388202-78388221 | Msa0524840:intron | 30.0% | |
CAATAATAGCAAAGCTCTTA+AGG | + | chr3_4:78388453-78388472 | Msa0524840:CDS | 30.0% | |
AATATTGTCTTCTTCGATGT+AGG | + | chr3_4:78388583-78388602 | Msa0524840:intron | 30.0% | |
CATATTAAATATGGGAATGG+TGG | - | chr3_4:78388967-78388986 | None:intergenic | 30.0% | |
CACCATTCCCATATTTAATA+TGG | + | chr3_4:78388965-78388984 | Msa0524840:CDS | 30.0% | |
CTCCATATTAAATATGGGAA+TGG | - | chr3_4:78388970-78388989 | None:intergenic | 30.0% | |
CATTCCCATATTTAATATGG+AGG | + | chr3_4:78388968-78388987 | Msa0524840:CDS | 30.0% | |
CACATGAAAAACCGTAAATA+AGG | - | chr3_4:78389049-78389068 | None:intergenic | 30.0% | |
! | ATATTACAATGTCTTTTGGC+AGG | + | chr3_4:78389155-78389174 | Msa0524840:intron | 30.0% |
CTTAAGAAGAGTTGTAGAAT+TGG | - | chr3_4:78389297-78389316 | None:intergenic | 30.0% | |
CAATTCTACAACTCTTCTTA+AGG | + | chr3_4:78389295-78389314 | Msa0524840:CDS | 30.0% | |
TTATGAAGACAAGACAGAAT+GGG | + | chr3_4:78389343-78389362 | Msa0524840:CDS | 30.0% | |
!!! | GTTTTTTAATTCTCGTCCTT+TGG | + | chr3_4:78389397-78389416 | Msa0524840:intron | 30.0% |
!! | TTCTAAAGTCTCCTAGATAT+TGG | + | chr3_4:78389528-78389547 | Msa0524840:intron | 30.0% |
AGAGAACAAATCATTTACCT+CGG | - | chr3_4:78390016-78390035 | None:intergenic | 30.0% | |
!! | AACCTTATAACTACTGATTC+TGG | + | chr3_4:78390050-78390069 | Msa0524840:intron | 30.0% |
ATCCAGAATCAGTAGTTATA+AGG | - | chr3_4:78390055-78390074 | None:intergenic | 30.0% | |
AATTGAAGTAGTGAAAATGG+AGG | - | chr3_4:78390144-78390163 | None:intergenic | 30.0% | |
CAGAATTGAAGTAGTGAAAA+TGG | - | chr3_4:78390147-78390166 | None:intergenic | 30.0% | |
! | CATTTTCACTACTTCAATTC+TGG | + | chr3_4:78390145-78390164 | Msa0524840:CDS | 30.0% |
! | TTCACAATAAGTACTGTTGT+AGG | - | chr3_4:78390389-78390408 | None:intergenic | 30.0% |
! | TGTGAATTTGATAGGTATTG+TGG | + | chr3_4:78390403-78390422 | Msa0524840:CDS | 30.0% |
! | AAAGCTCTTCTTTGCTATAT+GGG | + | chr3_4:78390481-78390500 | Msa0524840:CDS | 30.0% |
TCATTTATACCCTTTCTTGA+AGG | + | chr3_4:78390511-78390530 | Msa0524840:CDS | 30.0% | |
CATTTATACCCTTTCTTGAA+GGG | + | chr3_4:78390512-78390531 | Msa0524840:CDS | 30.0% | |
ACAAAGAGAATATAGAAGCA+AGG | - | chr3_4:78390592-78390611 | None:intergenic | 30.0% | |
CTTCTATATTCTCTTTGTTG+TGG | + | chr3_4:78390594-78390613 | Msa0524840:CDS | 30.0% | |
!! | CTATTGGATGATGATTTGTT+GGG | - | chr3_4:78390647-78390666 | None:intergenic | 30.0% |
! | ACTATTGGATGATGATTTGT+TGG | - | chr3_4:78390648-78390667 | None:intergenic | 30.0% |
TAATGCATGAAAAATAGGAC+GGG | + | chr3_4:78390794-78390813 | Msa0524840:three_prime_UTR | 30.0% | |
AAGAACACAAACACAAACAC+TGG | + | chr3_4:78384535-78384554 | Msa0524840:five_prime_UTR | 35.0% | |
GAAAAATATTGCGTGTTGAG+TGG | + | chr3_4:78384620-78384639 | Msa0524840:five_prime_UTR | 35.0% | |
AACTTTAGATCAGATCTGGT+TGG | + | chr3_4:78384865-78384884 | Msa0524840:intron | 35.0% | |
CATAACAATCTCGACAAACA+GGG | - | chr3_4:78385128-78385147 | None:intergenic | 35.0% | |
TCATAACAATCTCGACAAAC+AGG | - | chr3_4:78385129-78385148 | None:intergenic | 35.0% | |
AACGAGTTCAATTATCGACA+AGG | + | chr3_4:78385357-78385376 | Msa0524840:CDS | 35.0% | |
ATAATAAGTCAAGGAGACAG+TGG | + | chr3_4:78385397-78385416 | Msa0524840:CDS | 35.0% | |
TAATAAGTCAAGGAGACAGT+GGG | + | chr3_4:78385398-78385417 | Msa0524840:CDS | 35.0% | |
AGCTAGAAATTCACCTCTTA+AGG | + | chr3_4:78385647-78385666 | Msa0524840:intron | 35.0% | |
CATTATATATGCAAGGGTTG+GGG | - | chr3_4:78385701-78385720 | None:intergenic | 35.0% | |
GCATTATATATGCAAGGGTT+GGG | - | chr3_4:78385702-78385721 | None:intergenic | 35.0% | |
TGCATTATATATGCAAGGGT+TGG | - | chr3_4:78385703-78385722 | None:intergenic | 35.0% | |
GACACTGCATTATATATGCA+AGG | - | chr3_4:78385708-78385727 | None:intergenic | 35.0% | |
ACAGATTGATTATCAGGTGT+AGG | - | chr3_4:78385897-78385916 | None:intergenic | 35.0% | |
! | ATTCAAGTTAGCACTATACC+TGG | - | chr3_4:78385990-78386009 | None:intergenic | 35.0% |
GGACTTAAACTCATATGGTT+TGG | + | chr3_4:78386102-78386121 | Msa0524840:CDS | 35.0% | |
! | AAATGTTGACTGGAAGGAAA+GGG | + | chr3_4:78386126-78386145 | Msa0524840:CDS | 35.0% |
TGTAAGCCACTTATTCTGTT+TGG | + | chr3_4:78386269-78386288 | Msa0524840:intron | 35.0% | |
ACTAGCTAATCATATGTGTG+AGG | + | chr3_4:78386306-78386325 | Msa0524840:intron | 35.0% | |
! | AATCATATGTGTGAGGTATC+AGG | + | chr3_4:78386313-78386332 | Msa0524840:intron | 35.0% |
! | ATCATATGTGTGAGGTATCA+GGG | + | chr3_4:78386314-78386333 | Msa0524840:intron | 35.0% |
CATCTATTTGCATATTGAGG+TGG | + | chr3_4:78386577-78386596 | Msa0524840:intron | 35.0% | |
ATTATCCCAATTGGCAAGTT+AGG | + | chr3_4:78386686-78386705 | Msa0524840:intron | 35.0% | |
TTATCCCAATTGGCAAGTTA+GGG | + | chr3_4:78386687-78386706 | Msa0524840:intron | 35.0% | |
! | AAATCCCTAACTTGCCAATT+GGG | - | chr3_4:78386694-78386713 | None:intergenic | 35.0% |
! | AAAATCCCTAACTTGCCAAT+TGG | - | chr3_4:78386695-78386714 | None:intergenic | 35.0% |
!! | AGGGATTTTATCTAGAGTGT+AGG | + | chr3_4:78386706-78386725 | Msa0524840:intron | 35.0% |
!! | TTTTATCTAGAGTGTAGGCT+TGG | + | chr3_4:78386711-78386730 | Msa0524840:intron | 35.0% |
! | TTTATCTAGAGTGTAGGCTT+GGG | + | chr3_4:78386712-78386731 | Msa0524840:intron | 35.0% |
!!! | GCTTGGGGGTTTTTTTTTTT+TGG | + | chr3_4:78386728-78386747 | Msa0524840:intron | 35.0% |
!!! | TGGGGGTTTTTTTTTTTTGG+TGG | + | chr3_4:78386731-78386750 | Msa0524840:intron | 35.0% |
CCTGTCAAAAACAGAAACAA+AGG | - | chr3_4:78386908-78386927 | None:intergenic | 35.0% | |
!!! | CCTTTGTTTCTGTTTTTGAC+AGG | + | chr3_4:78386905-78386924 | Msa0524840:intron | 35.0% |
CTTCAGTTATCTGTGAGATT+TGG | + | chr3_4:78387088-78387107 | Msa0524840:CDS | 35.0% | |
!!! | AGATTTGGTTTGCATTTTCC+TGG | + | chr3_4:78387103-78387122 | Msa0524840:CDS | 35.0% |
! | GTTTGCATTTTCCTGGATTT+TGG | + | chr3_4:78387110-78387129 | Msa0524840:CDS | 35.0% |
AGATAAGTCTCACGGTTAAT+GGG | - | chr3_4:78387156-78387175 | None:intergenic | 35.0% | |
ACATAGCAATCCAAACCTTA+TGG | - | chr3_4:78387190-78387209 | None:intergenic | 35.0% | |
TTGTGTAGATATGATCGTGA+TGG | + | chr3_4:78387282-78387301 | Msa0524840:intron | 35.0% | |
ACAGTGTTTGCAGTTACAAT+AGG | - | chr3_4:78387372-78387391 | None:intergenic | 35.0% | |
! | TCTTGCTATGTATCTGATGA+TGG | + | chr3_4:78387432-78387451 | Msa0524840:CDS | 35.0% |
GTTTCGAACATATCTAACCT+TGG | + | chr3_4:78388346-78388365 | Msa0524840:intron | 35.0% | |
ACATCACACAAGATAAACCA+AGG | - | chr3_4:78388366-78388385 | None:intergenic | 35.0% | |
ATTCAAAAGATATGCACCGT+TGG | - | chr3_4:78388413-78388432 | None:intergenic | 35.0% | |
TAATAGCAAAGCTCTTAAGG+AGG | + | chr3_4:78388456-78388475 | Msa0524840:CDS | 35.0% | |
GAAGAAGACAATATTGCGAT+TGG | - | chr3_4:78388578-78388597 | None:intergenic | 35.0% | |
! | TTCAATAGGCAAGCTTTGTA+TGG | + | chr3_4:78388807-78388826 | Msa0524840:CDS | 35.0% |
!!! | TTATGATCCTGTTTTGACTG+AGG | + | chr3_4:78388830-78388849 | Msa0524840:CDS | 35.0% |
!! | GGTTCTAGAAAGAAAGGAAA+GGG | + | chr3_4:78388891-78388910 | Msa0524840:CDS | 35.0% |
TAATATGGAGGATATAGAGG+AGG | + | chr3_4:78388980-78388999 | Msa0524840:CDS | 35.0% | |
AATATGGAGGATATAGAGGA+GGG | + | chr3_4:78388981-78389000 | Msa0524840:CDS | 35.0% | |
GAAAATTGTTTGCAGTAACC+TGG | + | chr3_4:78389099-78389118 | Msa0524840:intron | 35.0% | |
ATCTAAGGATATCTACAACC+AGG | - | chr3_4:78389120-78389139 | None:intergenic | 35.0% | |
AATGTGGCAGCAATAAAAAC+CGG | - | chr3_4:78389245-78389264 | None:intergenic | 35.0% | |
! | TTTTATTGCTGCCACATTCA+TGG | + | chr3_4:78389247-78389266 | Msa0524840:CDS | 35.0% |
AGAGTTGTAGAATTGGTTGA+AGG | - | chr3_4:78389290-78389309 | None:intergenic | 35.0% | |
GTTATGAAGACAAGACAGAA+TGG | + | chr3_4:78389342-78389361 | Msa0524840:CDS | 35.0% | |
TATGAAGACAAGACAGAATG+GGG | + | chr3_4:78389344-78389363 | Msa0524840:CDS | 35.0% | |
GCAAATCAGAACCAATATCT+AGG | - | chr3_4:78389542-78389561 | None:intergenic | 35.0% | |
TTTGTGAGAAGACAAAATGC+AGG | - | chr3_4:78389979-78389998 | None:intergenic | 35.0% | |
GAGAACAAATCATTTACCTC+GGG | - | chr3_4:78390015-78390034 | None:intergenic | 35.0% | |
TAAGTAACTTTGCTAGCATG+TGG | + | chr3_4:78390102-78390121 | Msa0524840:CDS | 35.0% | |
TAGTGAAAATGGAGGTAAAG+AGG | - | chr3_4:78390136-78390155 | None:intergenic | 35.0% | |
GTCATTTGCCTTTGATGTAA+CGG | - | chr3_4:78390309-78390328 | None:intergenic | 35.0% | |
! | CAATAAGTACTGTTGTAGGA+GGG | - | chr3_4:78390385-78390404 | None:intergenic | 35.0% |
! | ACAATAAGTACTGTTGTAGG+AGG | - | chr3_4:78390386-78390405 | None:intergenic | 35.0% |
! | AATTTGATAGGTATTGTGGC+TGG | + | chr3_4:78390407-78390426 | Msa0524840:CDS | 35.0% |
! | AGATTGGTAACCACTGTTTA+TGG | - | chr3_4:78390444-78390463 | None:intergenic | 35.0% |
TAAACAGTGGTTACCAATCT+TGG | + | chr3_4:78390444-78390463 | Msa0524840:CDS | 35.0% | |
AAACAGTGGTTACCAATCTT+GGG | + | chr3_4:78390445-78390464 | Msa0524840:CDS | 35.0% | |
AAGAAGAGCTTTCCAAATAG+TGG | - | chr3_4:78390473-78390492 | None:intergenic | 35.0% | |
! | GAAAGCTCTTCTTTGCTATA+TGG | + | chr3_4:78390480-78390499 | Msa0524840:CDS | 35.0% |
! | ACCAACCATTGTTATTGTCT+GGG | + | chr3_4:78390559-78390578 | Msa0524840:CDS | 35.0% |
GAATATAGAAGCAAGGAGAA+CGG | - | chr3_4:78390585-78390604 | None:intergenic | 35.0% | |
AATGCATGAAAAATAGGACG+GGG | + | chr3_4:78390795-78390814 | Msa0524840:three_prime_UTR | 35.0% | |
TAGAAACAAGAATGCTATGC+AGG | - | chr3_4:78390834-78390853 | None:intergenic | 35.0% | |
! | TTTTCTATTGTGAGCTAGTG+TGG | + | chr3_4:78390958-78390977 | Msa0524840:three_prime_UTR | 35.0% |
CATCACTCTCTGTCACAATA+TGG | + | chr3_4:78384713-78384732 | Msa0524840:exon | 40.0% | |
AACAAGCTCGTTACGATTGT+GGG | - | chr3_4:78384766-78384785 | None:intergenic | 40.0% | |
GGACAAGTCTGTCATATATG+TGG | + | chr3_4:78385042-78385061 | Msa0524840:CDS | 40.0% | |
AGTCTGTCATATATGTGGTG+AGG | + | chr3_4:78385047-78385066 | Msa0524840:CDS | 40.0% | |
CATATATGTGGTGAGGATGT+TGG | + | chr3_4:78385054-78385073 | Msa0524840:CDS | 40.0% | |
ACAAGCAACAAACACATCAC+CGG | - | chr3_4:78385091-78385110 | None:intergenic | 40.0% | |
ACTAGATACAAAAGGCTCAG+AGG | + | chr3_4:78385192-78385211 | Msa0524840:CDS | 40.0% | |
AAGGATTACAGTTTGGCCAT+TGG | - | chr3_4:78385484-78385503 | None:intergenic | 40.0% | |
!! | GAGGTGAATTTCTAGCTACT+AGG | - | chr3_4:78385644-78385663 | None:intergenic | 40.0% |
ACCTCTTAAGGTGAATAAGC+AGG | + | chr3_4:78385659-78385678 | Msa0524840:intron | 40.0% | |
CCTCTTAAGGTGAATAAGCA+GGG | + | chr3_4:78385660-78385679 | Msa0524840:intron | 40.0% | |
GTTCGGACAGATTGATTATC+AGG | - | chr3_4:78385903-78385922 | None:intergenic | 40.0% | |
CACTTCCCTATATTGATCCA+AGG | + | chr3_4:78385961-78385980 | Msa0524840:CDS | 40.0% | |
GGTTGCCTTGGATCAATATA+GGG | - | chr3_4:78385969-78385988 | None:intergenic | 40.0% | |
TGGTTGCCTTGGATCAATAT+AGG | - | chr3_4:78385970-78385989 | None:intergenic | 40.0% | |
TATATTGATCCAAGGCAACC+AGG | + | chr3_4:78385969-78385988 | Msa0524840:CDS | 40.0% | |
GAGAATTGTGGATCCATCAA+AGG | + | chr3_4:78386081-78386100 | Msa0524840:CDS | 40.0% | |
! | ATGGTTTGGGAAATGTTGAC+TGG | + | chr3_4:78386116-78386135 | Msa0524840:CDS | 40.0% |
! | TTTGGGAAATGTTGACTGGA+AGG | + | chr3_4:78386120-78386139 | Msa0524840:CDS | 40.0% |
! | GAAATGTTGACTGGAAGGAA+AGG | + | chr3_4:78386125-78386144 | Msa0524840:CDS | 40.0% |
GCTGAAGCACGAGAAAAATA+TGG | + | chr3_4:78386162-78386181 | Msa0524840:CDS | 40.0% | |
ATGACTGGTAGATATGCTGA+TGG | + | chr3_4:78386190-78386209 | Msa0524840:CDS | 40.0% | |
TGACTGGTAGATATGCTGAT+GGG | + | chr3_4:78386191-78386210 | Msa0524840:CDS | 40.0% | |
AGATATGCTGATGGGAAAAG+CGG | + | chr3_4:78386199-78386218 | Msa0524840:CDS | 40.0% | |
!! | ATTGAAGGGACTGGTTCTAA+TGG | + | chr3_4:78386232-78386251 | Msa0524840:CDS | 40.0% |
CTTGTTACCTCTTCAAGAGT+TGG | + | chr3_4:78386460-78386479 | Msa0524840:intron | 40.0% | |
ATGTGATCCAACTCTTGAAG+AGG | - | chr3_4:78386470-78386489 | None:intergenic | 40.0% | |
! | GACCCAAAAAATGTCCCTTT+TGG | - | chr3_4:78386539-78386558 | None:intergenic | 40.0% |
TTGCATATTGAGGTGGTAGT+AGG | + | chr3_4:78386584-78386603 | Msa0524840:intron | 40.0% | |
TGCATATTGAGGTGGTAGTA+GGG | + | chr3_4:78386585-78386604 | Msa0524840:intron | 40.0% | |
CAACTTTCTCCATCATCTAC+AGG | - | chr3_4:78386625-78386644 | None:intergenic | 40.0% | |
!! | CTGTAGATGATGGAGAAAGT+TGG | + | chr3_4:78386623-78386642 | Msa0524840:intron | 40.0% |
!! | AGATGATGGAGAAAGTTGGA+TGG | + | chr3_4:78386627-78386646 | Msa0524840:intron | 40.0% |
! | TGGAGGTTGATTATCCCAAT+TGG | + | chr3_4:78386677-78386696 | Msa0524840:intron | 40.0% |
! | TTATCTAGAGTGTAGGCTTG+GGG | + | chr3_4:78386713-78386732 | Msa0524840:intron | 40.0% |
GTCAGCTGAGATGAAGAAAT+GGG | - | chr3_4:78386967-78386986 | None:intergenic | 40.0% | |
ACACGATGACAACACGATAA+GGG | - | chr3_4:78386990-78387009 | None:intergenic | 40.0% | |
AACACGATGACAACACGATA+AGG | - | chr3_4:78386991-78387010 | None:intergenic | 40.0% | |
AGAAACCAAGAACTATCAGC+CGG | - | chr3_4:78387014-78387033 | None:intergenic | 40.0% | |
! | AGTGGGTAAGCATCTTTTAC+CGG | - | chr3_4:78387060-78387079 | None:intergenic | 40.0% |
TAAAAGATGCTTACCCACTG+TGG | + | chr3_4:78387061-78387080 | Msa0524840:CDS | 40.0% | |
TAACTGAAGTCAACCACAGT+GGG | - | chr3_4:78387077-78387096 | None:intergenic | 40.0% | |
ATAACTGAAGTCAACCACAG+TGG | - | chr3_4:78387078-78387097 | None:intergenic | 40.0% | |
TGGAAACTGATCCAAAATCC+AGG | - | chr3_4:78387124-78387143 | None:intergenic | 40.0% | |
CAGATAAGTCTCACGGTTAA+TGG | - | chr3_4:78387157-78387176 | None:intergenic | 40.0% | |
CATTAACCGTGAGACTTATC+TGG | + | chr3_4:78387155-78387174 | Msa0524840:CDS | 40.0% | |
TGCTATGTTTCCTTCACTGT+TGG | + | chr3_4:78387202-78387221 | Msa0524840:intron | 40.0% | |
GAACAGAAAATGTCGCATCA+TGG | - | chr3_4:78387244-78387263 | None:intergenic | 40.0% | |
GTGTTTGCAGTTACAATAGG+TGG | - | chr3_4:78387369-78387388 | None:intergenic | 40.0% | |
! | AAACTCGGCTGTTTCAGATA+AGG | - | chr3_4:78387481-78387500 | None:intergenic | 40.0% |
! | GGTTCAACCCTCTTTTGTTA+AGG | + | chr3_4:78387596-78387615 | Msa0524840:CDS | 40.0% |
! | CTTCTGAGCTTTAGCAACAT+AGG | - | chr3_4:78387764-78387783 | None:intergenic | 40.0% |
CGTAATACCTGAATCATTCC+AGG | - | chr3_4:78387853-78387872 | None:intergenic | 40.0% | |
! | TGTTCTTAGGACATAGTGGA+GGG | + | chr3_4:78387949-78387968 | Msa0524840:CDS | 40.0% |
AAATAAACCAGACAACGCCA+TGG | - | chr3_4:78388111-78388130 | None:intergenic | 40.0% | |
TGTGCTAATCGATCAAACGA+TGG | + | chr3_4:78388299-78388318 | Msa0524840:intron | 40.0% | |
CAATTTCCGCAGAGATTTGA+TGG | + | chr3_4:78388529-78388548 | Msa0524840:CDS | 40.0% | |
TCAATGCCATCAAATCTCTG+CGG | - | chr3_4:78388538-78388557 | None:intergenic | 40.0% | |
TCAAGTTTAGCGAAAGCAGT+TGG | - | chr3_4:78388710-78388729 | None:intergenic | 40.0% | |
ATCTGCCAGATCAACTTGAA+AGG | + | chr3_4:78388738-78388757 | Msa0524840:intron | 40.0% | |
ATCAACTTGAAAGGTCAGGA+TGG | + | chr3_4:78388747-78388766 | Msa0524840:CDS | 40.0% | |
AAAGGTCAGGATGGTATTCA+GGG | + | chr3_4:78388756-78388775 | Msa0524840:CDS | 40.0% | |
!! | GAACTGGTTGCTGTTTCAAT+AGG | + | chr3_4:78388793-78388812 | Msa0524840:CDS | 40.0% |
AGATCTTCCTCAGTCAAAAC+AGG | - | chr3_4:78388840-78388859 | None:intergenic | 40.0% | |
!! | TGTTGGGGTTCTAGAAAGAA+AGG | + | chr3_4:78388885-78388904 | Msa0524840:CDS | 40.0% |
!! | GGGTTCTAGAAAGAAAGGAA+AGG | + | chr3_4:78388890-78388909 | Msa0524840:CDS | 40.0% |
TCTAGAAAGAAAGGAAAGGG+TGG | + | chr3_4:78388894-78388913 | Msa0524840:CDS | 40.0% | |
CTAGAAAGAAAGGAAAGGGT+GGG | + | chr3_4:78388895-78388914 | Msa0524840:CDS | 40.0% | |
AAGGGTGGGAATAAGAAGTA+CGG | + | chr3_4:78388909-78388928 | Msa0524840:CDS | 40.0% | |
! | TGGCAGGTTATGATGATGAA+AGG | + | chr3_4:78389171-78389190 | Msa0524840:intron | 40.0% |
TCTAATGTCTCAGAAGAGCT+TGG | + | chr3_4:78389199-78389218 | Msa0524840:CDS | 40.0% | |
TAGAATTGGTTGAAGGTGGA+AGG | - | chr3_4:78389283-78389302 | None:intergenic | 40.0% | |
GTTGTAGAATTGGTTGAAGG+TGG | - | chr3_4:78389287-78389306 | None:intergenic | 40.0% | |
! | CATAACCACAACTGATAACG+TGG | - | chr3_4:78389328-78389347 | None:intergenic | 40.0% |
! | ATTTTCTGACTTCCCCAGAT+TGG | + | chr3_4:78389649-78389668 | Msa0524840:intron | 40.0% |
ACCATAGATCCATCCAATCT+GGG | - | chr3_4:78389665-78389684 | None:intergenic | 40.0% | |
AACCATAGATCCATCCAATC+TGG | - | chr3_4:78389666-78389685 | None:intergenic | 40.0% | |
TGACTGAAGATATCCTGACT+GGG | + | chr3_4:78389689-78389708 | Msa0524840:intron | 40.0% | |
AGACGGTCTGAAAGATTGAT+GGG | - | chr3_4:78389787-78389806 | None:intergenic | 40.0% | |
GAAGATCTCTATTGAACCCA+AGG | - | chr3_4:78389830-78389849 | None:intergenic | 40.0% | |
CAATAGAGATCTTCCTTAGC+AGG | + | chr3_4:78389836-78389855 | Msa0524840:CDS | 40.0% | |
ATAAAGGACAATGCCTGCTA+AGG | - | chr3_4:78389852-78389871 | None:intergenic | 40.0% | |
! | TTAGCAGGCATTGTCCTTTA+TGG | + | chr3_4:78389851-78389870 | Msa0524840:CDS | 40.0% |
! | AGGCATTGTCCTTTATGGTA+TGG | + | chr3_4:78389856-78389875 | Msa0524840:CDS | 40.0% |
CCATTGTAGCCATACCATAA+AGG | - | chr3_4:78389868-78389887 | None:intergenic | 40.0% | |
CCTTTATGGTATGGCTACAA+TGG | + | chr3_4:78389865-78389884 | Msa0524840:CDS | 40.0% | |
TATGGTATGGCTACAATGGA+AGG | + | chr3_4:78389869-78389888 | Msa0524840:CDS | 40.0% | |
AGCAATGGGATTGAGGTAAA+GGG | - | chr3_4:78389940-78389959 | None:intergenic | 40.0% | |
AAGCAATGGGATTGAGGTAA+AGG | - | chr3_4:78389941-78389960 | None:intergenic | 40.0% | |
!! | CTACTTCAATTCTGGAGCTT+AGG | + | chr3_4:78390153-78390172 | Msa0524840:CDS | 40.0% |
!!! | AACGAGCAGTTTTGGGTTAT+CGG | + | chr3_4:78390209-78390228 | Msa0524840:CDS | 40.0% |
! | ATCTTTTCGCCGTGTTTCAA+GGG | + | chr3_4:78390246-78390265 | Msa0524840:CDS | 40.0% |
TTTGAGAAGCCCTTGAAACA+CGG | - | chr3_4:78390258-78390277 | None:intergenic | 40.0% | |
TCAAAGGCAAATGACGAAGA+CGG | + | chr3_4:78390314-78390333 | Msa0524840:CDS | 40.0% | |
CTGAGCTATACGTGTTCAAA+TGG | + | chr3_4:78390345-78390364 | Msa0524840:CDS | 40.0% | |
! | GTGTCTTTTGCCATAAACAG+TGG | + | chr3_4:78390431-78390450 | Msa0524840:CDS | 40.0% |
AACAGTGGTTACCAATCTTG+GGG | + | chr3_4:78390446-78390465 | Msa0524840:CDS | 40.0% | |
CCAAAAGACCCTTCAAGAAA+GGG | - | chr3_4:78390523-78390542 | None:intergenic | 40.0% | |
! | CCTTTCTTGAAGGGTCTTTT+GGG | + | chr3_4:78390521-78390540 | Msa0524840:CDS | 40.0% |
! | CTTTCTTGAAGGGTCTTTTG+GGG | + | chr3_4:78390522-78390541 | Msa0524840:CDS | 40.0% |
! | CACCAACCATTGTTATTGTC+TGG | + | chr3_4:78390558-78390577 | Msa0524840:CDS | 40.0% |
! | TATTCTCTTTGTTGTGGGTG+AGG | + | chr3_4:78390600-78390619 | Msa0524840:CDS | 40.0% |
TTGTTGGGATCAGAGATGAA+GGG | - | chr3_4:78390632-78390651 | None:intergenic | 40.0% | |
TTTGTTGGGATCAGAGATGA+AGG | - | chr3_4:78390633-78390652 | None:intergenic | 40.0% | |
TCATCATCCAATAGTCAGTG+TGG | + | chr3_4:78390653-78390672 | Msa0524840:CDS | 40.0% | |
! | GTTGATACCACACTGACTAT+TGG | - | chr3_4:78390663-78390682 | None:intergenic | 40.0% |
ACAAGGTGCAATGTGATGAT+TGG | + | chr3_4:78390930-78390949 | Msa0524840:three_prime_UTR | 40.0% | |
! | CTTGATGATCAGAGTTGTGT+TGG | + | chr3_4:78391010-78391029 | Msa0524840:three_prime_UTR | 40.0% |
CGATCTGCGTTCAGATATAC+AGG | - | chr3_4:78384666-78384685 | None:intergenic | 45.0% | |
CAGAGAGTGATGCAGATGAA+TGG | - | chr3_4:78384705-78384724 | None:intergenic | 45.0% | |
CACAATATGGAAGCCTCTTC+CGG | + | chr3_4:78384726-78384745 | Msa0524840:exon | 45.0% | |
GAACAAGCTCGTTACGATTG+TGG | - | chr3_4:78384767-78384786 | None:intergenic | 45.0% | |
TAAGAAACTAACCCCGCTGT+CGG | - | chr3_4:78384808-78384827 | None:intergenic | 45.0% | |
!! | TCATCATCTCCATCGACTCT+AGG | - | chr3_4:78385312-78385331 | None:intergenic | 45.0% |
CCCTGCTTATTCACCTTAAG+AGG | - | chr3_4:78385663-78385682 | None:intergenic | 45.0% | |
! | GTGAATAAGCAGGGTATTCG+AGG | + | chr3_4:78385669-78385688 | Msa0524840:intron | 45.0% |
TATATGCAAGGGTTGGGGTT+CGG | - | chr3_4:78385696-78385715 | None:intergenic | 45.0% | |
TGAGCTTCGCTCAATTGGTA+GGG | - | chr3_4:78385730-78385749 | None:intergenic | 45.0% | |
CAATCTGTCCGAACTACTTC+TGG | + | chr3_4:78385909-78385928 | Msa0524840:CDS | 45.0% | |
CCAAAGGACCAGAAGTAGTT+CGG | - | chr3_4:78385920-78385939 | None:intergenic | 45.0% | |
CGAACTACTTCTGGTCCTTT+GGG | + | chr3_4:78385918-78385937 | Msa0524840:CDS | 45.0% | |
GTGAGTGAGCTTTCTCAGAT+GGG | - | chr3_4:78385944-78385963 | None:intergenic | 45.0% | |
AGTGAGTGAGCTTTCTCAGA+TGG | - | chr3_4:78385945-78385964 | None:intergenic | 45.0% | |
TACAGTTCCGGTGAGAATTG+TGG | + | chr3_4:78386069-78386088 | Msa0524840:intron | 45.0% | |
GATGGATCCACAATTCTCAC+CGG | - | chr3_4:78386079-78386098 | None:intergenic | 45.0% | |
CAGTCTTGACAACCATGAGA+AGG | - | chr3_4:78386414-78386433 | None:intergenic | 45.0% | |
ATCATCTACAGGTACAGCAG+AGG | - | chr3_4:78386614-78386633 | None:intergenic | 45.0% | |
TCTGCTGTACCTGTAGATGA+TGG | + | chr3_4:78386613-78386632 | Msa0524840:intron | 45.0% | |
TGATGGAGAAAGTTGGATGG+AGG | + | chr3_4:78386630-78386649 | Msa0524840:intron | 45.0% | |
! | TATCTAGAGTGTAGGCTTGG+GGG | + | chr3_4:78386714-78386733 | Msa0524840:intron | 45.0% |
ATGCTCGACAACCTATGAGT+CGG | + | chr3_4:78386935-78386954 | Msa0524840:CDS | 45.0% | |
ATGGGTACAATCCGACTCAT+AGG | - | chr3_4:78386949-78386968 | None:intergenic | 45.0% | |
GGTCAGCTGAGATGAAGAAA+TGG | - | chr3_4:78386968-78386987 | None:intergenic | 45.0% | |
CACGATGACAACACGATAAG+GGG | - | chr3_4:78386989-78387008 | None:intergenic | 45.0% | |
ATCGTGTTGTCATCGTGTTC+CGG | + | chr3_4:78386992-78387011 | Msa0524840:CDS | 45.0% | |
GCAATATCGTGTAACTCACC+CGG | + | chr3_4:78387038-78387057 | Msa0524840:CDS | 45.0% | |
! | GTGGGTAAGCATCTTTTACC+GGG | - | chr3_4:78387059-78387078 | None:intergenic | 45.0% |
! | CGGTTAATGGGAGACCATTT+TGG | - | chr3_4:78387144-78387163 | None:intergenic | 45.0% |
GTTTCCTTCACTGTTGGACT+TGG | + | chr3_4:78387208-78387227 | Msa0524840:intron | 45.0% | |
TGATGGAGAACCATCACAGT+TGG | + | chr3_4:78387299-78387318 | Msa0524840:CDS | 45.0% | |
! | GTACTGACAAATACGTCGAC+AGG | - | chr3_4:78387327-78387346 | None:intergenic | 45.0% |
CGACGTATTTGTCAGTACAG+TGG | + | chr3_4:78387329-78387348 | Msa0524840:CDS | 45.0% | |
! | CAATAGGTGGCTCTTTGAGA+GGG | - | chr3_4:78387356-78387375 | None:intergenic | 45.0% |
ACAATAGGTGGCTCTTTGAG+AGG | - | chr3_4:78387357-78387376 | None:intergenic | 45.0% | |
AGCAAGAAACCTTGTCGACA+GGG | - | chr3_4:78387419-78387438 | None:intergenic | 45.0% | |
TAGCAAGAAACCTTGTCGAC+AGG | - | chr3_4:78387420-78387439 | None:intergenic | 45.0% | |
AGCCGAGTTTGCAAAGATGT+GGG | + | chr3_4:78387491-78387510 | Msa0524840:CDS | 45.0% | |
CACCCACATCTTTGCAAACT+CGG | - | chr3_4:78387496-78387515 | None:intergenic | 45.0% | |
CGTCGCTCCTTAACAAAAGA+GGG | - | chr3_4:78387606-78387625 | None:intergenic | 45.0% | |
TCGTCGCTCCTTAACAAAAG+AGG | - | chr3_4:78387607-78387626 | None:intergenic | 45.0% | |
TAAAGCTCAGAAGATGCCAG+AGG | + | chr3_4:78387771-78387790 | Msa0524840:CDS | 45.0% | |
TTGGCCTGGAAATAATCCCA+GGG | + | chr3_4:78387822-78387841 | Msa0524840:CDS | 45.0% | |
TGATCCCTGGGATTATTTCC+AGG | - | chr3_4:78387829-78387848 | None:intergenic | 45.0% | |
AATAATCCCAGGGATCATCC+TGG | + | chr3_4:78387832-78387851 | Msa0524840:CDS | 45.0% | |
ATCATTCCAGGATGATCCCT+GGG | - | chr3_4:78387841-78387860 | None:intergenic | 45.0% | |
AATCATTCCAGGATGATCCC+TGG | - | chr3_4:78387842-78387861 | None:intergenic | 45.0% | |
GGATCATCCTGGAATGATTC+AGG | + | chr3_4:78387843-78387862 | Msa0524840:CDS | 45.0% | |
! | CAATAATGGTGGAGGTTCTG+CGG | - | chr3_4:78387890-78387909 | None:intergenic | 45.0% |
TGTGGTATGCAGGTGTTCTT+AGG | + | chr3_4:78387936-78387955 | Msa0524840:intron | 45.0% | |
CAGGTGTTCTTAGGACATAG+TGG | + | chr3_4:78387945-78387964 | Msa0524840:intron | 45.0% | |
GTGTTCTTAGGACATAGTGG+AGG | + | chr3_4:78387948-78387967 | Msa0524840:CDS | 45.0% | |
CGAGACACATAAACAAGCCT+GGG | - | chr3_4:78387999-78388018 | None:intergenic | 45.0% | |
ACGAGACACATAAACAAGCC+TGG | - | chr3_4:78388000-78388019 | None:intergenic | 45.0% | |
TTCTTGTGATGTTGGAAGCC+TGG | - | chr3_4:78388032-78388051 | None:intergenic | 45.0% | |
AGGCTTCCAACATCACAAGA+AGG | + | chr3_4:78388031-78388050 | Msa0524840:CDS | 45.0% | |
TTCCAACATCACAAGAAGGC+TGG | + | chr3_4:78388035-78388054 | Msa0524840:CDS | 45.0% | |
CACGGGAAACAGCCATTAAA+AGG | - | chr3_4:78388135-78388154 | None:intergenic | 45.0% | |
GTTTCTGCTGTCTTGACCAA+CGG | + | chr3_4:78388394-78388413 | Msa0524840:CDS | 45.0% | |
GGAGGCTATGTGTTTCATGA+TGG | + | chr3_4:78388474-78388493 | Msa0524840:CDS | 45.0% | |
AGCAGTTGGAGTGTAATGCA+AGG | - | chr3_4:78388696-78388715 | None:intergenic | 45.0% | |
!! | CCTGACCTTTCAAGTTGATC+TGG | - | chr3_4:78388746-78388765 | None:intergenic | 45.0% |
CCAGATCAACTTGAAAGGTC+AGG | + | chr3_4:78388743-78388762 | Msa0524840:intron | 45.0% | |
GAAAGGTCAGGATGGTATTC+AGG | + | chr3_4:78388755-78388774 | Msa0524840:CDS | 45.0% | |
AACCAGTTCCCACATAGACA+GGG | - | chr3_4:78388782-78388801 | None:intergenic | 45.0% | |
! | AGAAGTACGGTGACAAGAAG+AGG | + | chr3_4:78388922-78388941 | Msa0524840:CDS | 45.0% |
GAAGTACGGTGACAAGAAGA+GGG | + | chr3_4:78388923-78388942 | Msa0524840:CDS | 45.0% | |
AAGTACGGTGACAAGAAGAG+GGG | + | chr3_4:78388924-78388943 | Msa0524840:CDS | 45.0% | |
!! | AAGAGCTTGGAGAAGCGTTT+CGG | + | chr3_4:78389212-78389231 | Msa0524840:CDS | 45.0% |
GCAATCCACGTTATCAGTTG+TGG | + | chr3_4:78389320-78389339 | Msa0524840:CDS | 45.0% | |
CCATAGATCCATCCAATCTG+GGG | - | chr3_4:78389664-78389683 | None:intergenic | 45.0% | |
GTGACTGAAGATATCCTGAC+TGG | + | chr3_4:78389688-78389707 | Msa0524840:intron | 45.0% | |
CATGCATCTTAAACCCAGTC+AGG | - | chr3_4:78389705-78389724 | None:intergenic | 45.0% | |
TTAAGATGCATGCACGTGGT+TGG | + | chr3_4:78389713-78389732 | Msa0524840:intron | 45.0% | |
GAGACGGTCTGAAAGATTGA+TGG | - | chr3_4:78389788-78389807 | None:intergenic | 45.0% | |
TCTTTCAGACCGTCTCAATC+AGG | + | chr3_4:78389792-78389811 | Msa0524840:CDS | 45.0% | |
ATGGCTACAATGGAAGGATG+AGG | + | chr3_4:78389875-78389894 | Msa0524840:CDS | 45.0% | |
ATATAAGCCAGCCTCATGAG+AGG | - | chr3_4:78389901-78389920 | None:intergenic | 45.0% | |
GCAATGGGATTGAGGTAAAG+GGG | - | chr3_4:78389939-78389958 | None:intergenic | 45.0% | |
!! | CTTCAATTCTGGAGCTTAGG+TGG | + | chr3_4:78390156-78390175 | Msa0524840:CDS | 45.0% |
!! | GTGGTGTTGGTATAGAAGAC+TGG | + | chr3_4:78390180-78390199 | Msa0524840:CDS | 45.0% |
! | GTGTTGGTATAGAAGACTGG+TGG | + | chr3_4:78390183-78390202 | Msa0524840:CDS | 45.0% |
! | GTGGAGAAACGAGCAGTTTT+GGG | + | chr3_4:78390202-78390221 | Msa0524840:CDS | 45.0% |
! | CATCTTTTCGCCGTGTTTCA+AGG | + | chr3_4:78390245-78390264 | Msa0524840:CDS | 45.0% |
CAAAGGCAAATGACGAAGAC+GGG | + | chr3_4:78390315-78390334 | Msa0524840:CDS | 45.0% | |
AAAGGCAAATGACGAAGACG+GGG | + | chr3_4:78390316-78390335 | Msa0524840:CDS | 45.0% | |
!! | CAAATAGTGGACCCCAAGAT+TGG | - | chr3_4:78390460-78390479 | None:intergenic | 45.0% |
CAATCTTGGGGTCCACTATT+TGG | + | chr3_4:78390458-78390477 | Msa0524840:CDS | 45.0% | |
! | CCCTTTCTTGAAGGGTCTTT+TGG | + | chr3_4:78390520-78390539 | Msa0524840:CDS | 45.0% |
CCCAAAAGACCCTTCAAGAA+AGG | - | chr3_4:78390524-78390543 | None:intergenic | 45.0% | |
GCCCAGACAATAACAATGGT+TGG | - | chr3_4:78390563-78390582 | None:intergenic | 45.0% | |
AACGGCCCAGACAATAACAA+TGG | - | chr3_4:78390567-78390586 | None:intergenic | 45.0% | |
TGTTGGGATCAGAGATGAAG+GGG | - | chr3_4:78390631-78390650 | None:intergenic | 45.0% | |
AGGTGCAATGTGATGATTGG+TGG | + | chr3_4:78390933-78390952 | Msa0524840:three_prime_UTR | 45.0% | |
!!! | ATAATTTTTTAATTACAAAT+TGG | - | chr3_4:78388634-78388653 | None:intergenic | 5.0% |
!!! | ATTAAAAAATTATTTTCTTT+TGG | + | chr3_4:78388641-78388660 | Msa0524840:intron | 5.0% |
!!! | AAATATTTTTTTATTTTGAA+GGG | - | chr3_4:78388668-78388687 | None:intergenic | 5.0% |
!!! | AAAATATTTTTTTATTTTGA+AGG | - | chr3_4:78388669-78388688 | None:intergenic | 5.0% |
GATGTTGGAACAACACCCAC+CGG | + | chr3_4:78385069-78385088 | Msa0524840:CDS | 50.0% | |
GCAACAAACACATCACCGGT+GGG | - | chr3_4:78385087-78385106 | None:intergenic | 50.0% | |
AGCAACAAACACATCACCGG+TGG | - | chr3_4:78385088-78385107 | None:intergenic | 50.0% | |
CAACCTCCTCTTCTCACCAA+TGG | + | chr3_4:78385465-78385484 | Msa0524840:CDS | 50.0% | |
GTTTGGCCATTGGTGAGAAG+AGG | - | chr3_4:78385474-78385493 | None:intergenic | 50.0% | |
GTGAGCTTCGCTCAATTGGT+AGG | - | chr3_4:78385731-78385750 | None:intergenic | 50.0% | |
ACCAATTGAGCGAAGCTCAC+AGG | + | chr3_4:78385731-78385750 | Msa0524840:intron | 50.0% | |
CCAATTGAGCGAAGCTCACA+GGG | + | chr3_4:78385732-78385751 | Msa0524840:intron | 50.0% | |
CCGAACTACTTCTGGTCCTT+TGG | + | chr3_4:78385917-78385936 | Msa0524840:CDS | 50.0% | |
AGCACTATACCTGGTTGCCT+TGG | - | chr3_4:78385981-78386000 | None:intergenic | 50.0% | |
GACTGGAAGGAAAGGGTTGA+AGG | + | chr3_4:78386133-78386152 | Msa0524840:CDS | 50.0% | |
GGAAGGAAAGGGTTGAAGGT+TGG | + | chr3_4:78386137-78386156 | Msa0524840:CDS | 50.0% | |
TATGCTGATGGGAAAAGCGG+AGG | + | chr3_4:78386202-78386221 | Msa0524840:CDS | 50.0% | |
AGCGGAGGAGGAGATATTGA+AGG | + | chr3_4:78386217-78386236 | Msa0524840:CDS | 50.0% | |
GCGGAGGAGGAGATATTGAA+GGG | + | chr3_4:78386218-78386237 | Msa0524840:CDS | 50.0% | |
GGAGGAGATATTGAAGGGAC+TGG | + | chr3_4:78386223-78386242 | Msa0524840:CDS | 50.0% | |
GTGTTCCGGCTGATAGTTCT+TGG | + | chr3_4:78387006-78387025 | Msa0524840:CDS | 50.0% | |
ACCGTGAGACTTATCTGGAG+AGG | + | chr3_4:78387160-78387179 | Msa0524840:CDS | 50.0% | |
GCCTCTCCAGATAAGTCTCA+CGG | - | chr3_4:78387164-78387183 | None:intergenic | 50.0% | |
ATCTGGAGAGGCTTGCCATA+AGG | + | chr3_4:78387172-78387191 | Msa0524840:CDS | 50.0% | |
GAGAGGCTTGCCATAAGGTT+TGG | + | chr3_4:78387177-78387196 | Msa0524840:intron | 50.0% | |
CAAGCCAAGTCCAACAGTGA+AGG | - | chr3_4:78387215-78387234 | None:intergenic | 50.0% | |
CTTCACTGTTGGACTTGGCT+TGG | + | chr3_4:78387213-78387232 | Msa0524840:intron | 50.0% | |
! | TGTTGACTACCCTGTCGACA+AGG | + | chr3_4:78387407-78387426 | Msa0524840:CDS | 50.0% |
CAGCCGAGTTTGCAAAGATG+TGG | + | chr3_4:78387490-78387509 | Msa0524840:CDS | 50.0% | |
TAAGGAGCGACGAGCAATGA+AGG | + | chr3_4:78387614-78387633 | Msa0524840:CDS | 50.0% | |
CAATGCAGGATGGAACTCCT+TGG | + | chr3_4:78387803-78387822 | Msa0524840:CDS | 50.0% | |
CTGGGATTATTTCCAGGCCA+AGG | - | chr3_4:78387823-78387842 | None:intergenic | 50.0% | |
CTTGGCCTGGAAATAATCCC+AGG | + | chr3_4:78387821-78387840 | Msa0524840:CDS | 50.0% | |
AGTGGAGGGCTTGATACAGA+TGG | + | chr3_4:78387963-78387982 | Msa0524840:CDS | 50.0% | |
CAGATGGCAATGAACTTCCC+AGG | + | chr3_4:78387979-78387998 | Msa0524840:CDS | 50.0% | |
CTCCAGCCTTCTTGTGATGT+TGG | - | chr3_4:78388040-78388059 | None:intergenic | 50.0% | |
GGCTGGAGCTATGAATGCTT+TGG | + | chr3_4:78388052-78388071 | Msa0524840:CDS | 50.0% | |
ATGTGTTCCATGGCGTTGTC+TGG | + | chr3_4:78388101-78388120 | Msa0524840:intron | 50.0% | |
GATTCACAGCACCACTTAGC+AGG | - | chr3_4:78388216-78388235 | None:intergenic | 50.0% | |
TATTCAGGGCCCTGTCTATG+TGG | + | chr3_4:78388770-78388789 | Msa0524840:CDS | 50.0% | |
ATTCAGGGCCCTGTCTATGT+GGG | + | chr3_4:78388771-78388790 | Msa0524840:CDS | 50.0% | |
CAACCAGTTCCCACATAGAC+AGG | - | chr3_4:78388783-78388802 | None:intergenic | 50.0% | |
!! | GATATAGAGGAGGGTGTCGA+AGG | + | chr3_4:78388990-78389009 | Msa0524840:CDS | 50.0% |
CAAGACAGAATGGGGCAAAG+AGG | + | chr3_4:78389352-78389371 | Msa0524840:CDS | 50.0% | |
TCTGACTTCCCCAGATTGGA+TGG | + | chr3_4:78389653-78389672 | Msa0524840:intron | 50.0% | |
CCCCAGATTGGATGGATCTA+TGG | + | chr3_4:78389661-78389680 | Msa0524840:intron | 50.0% | |
! | GGGTTTAAGATGCATGCACG+TGG | + | chr3_4:78389709-78389728 | Msa0524840:intron | 50.0% |
ACGAGGTGGCATGCAATAGA+CGG | - | chr3_4:78389743-78389762 | None:intergenic | 50.0% | |
ACCGTCTCAATCAGGTGCTT+CGG | + | chr3_4:78389800-78389819 | Msa0524840:CDS | 50.0% | |
! | ACCGAAGCACCTGATTGAGA+CGG | - | chr3_4:78389804-78389823 | None:intergenic | 50.0% |
TCTCAATCAGGTGCTTCGGT+GGG | + | chr3_4:78389804-78389823 | Msa0524840:CDS | 50.0% | |
GTACGCAAGCAATGGGATTG+AGG | - | chr3_4:78389947-78389966 | None:intergenic | 50.0% | |
GCACACAGTACGCAAGCAAT+GGG | - | chr3_4:78389954-78389973 | None:intergenic | 50.0% | |
AGCACACAGTACGCAAGCAA+TGG | - | chr3_4:78389955-78389974 | None:intergenic | 50.0% | |
!! | ATTCTGGAGCTTAGGTGGAG+TGG | + | chr3_4:78390161-78390180 | Msa0524840:CDS | 50.0% |
! | GGTGGAGAAACGAGCAGTTT+TGG | + | chr3_4:78390201-78390220 | Msa0524840:CDS | 50.0% |
!!! | GAGCAGTTTTGGGTTATCGG+TGG | + | chr3_4:78390212-78390231 | Msa0524840:CDS | 50.0% |
! | GGCTTCTCAAAGTGCTTGCA+GGG | + | chr3_4:78390267-78390286 | Msa0524840:CDS | 50.0% |
TATGGAAGCCTCTTCCGGCA+TGG | + | chr3_4:78384731-78384750 | Msa0524840:exon | 55.0% | |
TCAGGGAGTCCTAGAGTCGA+TGG | + | chr3_4:78385300-78385319 | Msa0524840:intron | 55.0% | |
TGGCCATTGGTGAGAAGAGG+AGG | - | chr3_4:78385471-78385490 | None:intergenic | 55.0% | |
CCCTGTGAGCTTCGCTCAAT+TGG | - | chr3_4:78385735-78385754 | None:intergenic | 55.0% | |
GCGAAGCTCACAGGGACATA+TGG | + | chr3_4:78385740-78385759 | Msa0524840:intron | 55.0% | |
GCTTTCTCAGATGGGCCCAA+AGG | - | chr3_4:78385936-78385955 | None:intergenic | 55.0% | |
TCGACAGGAGCCAACTGTGA+TGG | - | chr3_4:78387312-78387331 | None:intergenic | 55.0% | |
GCTCAGAAGATGCCAGAGGA+AGG | + | chr3_4:78387775-78387794 | Msa0524840:CDS | 55.0% | |
AGAAGATGCCAGAGGAAGGC+TGG | + | chr3_4:78387779-78387798 | Msa0524840:CDS | 55.0% | |
TGCATTGTCCAGCCTTCCTC+TGG | - | chr3_4:78387790-78387809 | None:intergenic | 55.0% | |
AGAGGAAGGCTGGACAATGC+AGG | + | chr3_4:78387789-78387808 | Msa0524840:CDS | 55.0% | |
GAAGGCTGGACAATGCAGGA+TGG | + | chr3_4:78387793-78387812 | Msa0524840:CDS | 55.0% | |
GTGTCTCGTGAAAAGCGACC+AGG | + | chr3_4:78388011-78388030 | Msa0524840:CDS | 55.0% | |
! | GAAGCGTTTCGGACAGTCTC+CGG | + | chr3_4:78389223-78389242 | Msa0524840:CDS | 55.0% |
GCTGCCACATTCATGGAGCA+AGG | + | chr3_4:78389254-78389273 | Msa0524840:CDS | 55.0% | |
GCCACATTCATGGAGCAAGG+TGG | + | chr3_4:78389257-78389276 | Msa0524840:CDS | 55.0% | |
GCCACCTTGCTCCATGAATG+TGG | - | chr3_4:78389261-78389280 | None:intergenic | 55.0% | |
CTATTGCATGCCACCTCGTC+CGG | + | chr3_4:78389744-78389763 | Msa0524840:CDS | 55.0% | |
GGAGCAGAACCCTTGAATGC+CGG | - | chr3_4:78389766-78389785 | None:intergenic | 55.0% | |
GTCTCAATCAGGTGCTTCGG+TGG | + | chr3_4:78389803-78389822 | Msa0524840:CDS | 55.0% | |
GAAGGATGAGGCCTCTCATG+AGG | + | chr3_4:78389887-78389906 | Msa0524840:CDS | 55.0% | |
GAGCTTAGGTGGAGTGGTGT+TGG | + | chr3_4:78390167-78390186 | Msa0524840:CDS | 55.0% | |
! | GGGCTTCTCAAAGTGCTTGC+AGG | + | chr3_4:78390266-78390285 | Msa0524840:CDS | 55.0% |
CGTCACGATTCTGCCGACAG+CGG | + | chr3_4:78384792-78384811 | Msa0524840:CDS | 60.0% | |
GTCACGATTCTGCCGACAGC+GGG | + | chr3_4:78384793-78384812 | Msa0524840:CDS | 60.0% | |
TCACGATTCTGCCGACAGCG+GGG | + | chr3_4:78384794-78384813 | Msa0524840:CDS | 60.0% | |
GCTGATGGGAAAAGCGGAGG+AGG | + | chr3_4:78386205-78386224 | Msa0524840:CDS | 60.0% | |
CAGGATGGAACTCCTTGGCC+TGG | + | chr3_4:78387808-78387827 | Msa0524840:CDS | 60.0% | |
GGCCCTGTCTATGTGGGAAC+TGG | + | chr3_4:78388777-78388796 | Msa0524840:CDS | 60.0% | |
CCACCTCGTCCGGCATTCAA+GGG | + | chr3_4:78389754-78389773 | Msa0524840:CDS | 60.0% | |
GAACCCTTGAATGCCGGACG+AGG | - | chr3_4:78389760-78389779 | None:intergenic | 60.0% | |
GATGAGGCCTCTCATGAGGC+TGG | + | chr3_4:78389891-78389910 | Msa0524840:CDS | 60.0% | |
GCCTCTTCCGGCATGGTTGC+TGG | + | chr3_4:78384738-78384757 | Msa0524840:CDS | 65.0% | |
GCCAGCAACCATGCCGGAAG+AGG | - | chr3_4:78384742-78384761 | None:intergenic | 65.0% | |
GTGGGAGCCAGCAACCATGC+CGG | - | chr3_4:78384748-78384767 | None:intergenic | 65.0% | |
GCCACCTCGTCCGGCATTCA+AGG | + | chr3_4:78389753-78389772 | Msa0524840:CDS | 65.0% | |
CCCTTGAATGCCGGACGAGG+TGG | - | chr3_4:78389757-78389776 | None:intergenic | 65.0% | |
TCAGGTGCTTCGGTGGGCCT+TGG | + | chr3_4:78389810-78389829 | Msa0524840:CDS | 65.0% | |
CAGGTGCTTCGGTGGGCCTT+GGG | + | chr3_4:78389811-78389830 | Msa0524840:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 78384508 | 78391098 | 78384508 | ID=Msa0524840;Name=Msa0524840 |
chr3_4 | mRNA | 78384508 | 78391098 | 78384508 | ID=Msa0524840-mRNA-1;Parent=Msa0524840;Name=Msa0524840-mRNA-1;_AED=0.08;_eAED=0.08;_QI=224|0.92|0.92|1|1|1|14|410|1072 |
chr3_4 | exon | 78384508 | 78384815 | 78384508 | ID=Msa0524840-mRNA-1:exon:23245;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78385018 | 78385213 | 78385018 | ID=Msa0524840-mRNA-1:exon:23246;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78385304 | 78385494 | 78385304 | ID=Msa0524840-mRNA-1:exon:23247;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78385879 | 78385990 | 78385879 | ID=Msa0524840-mRNA-1:exon:23248;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78386074 | 78386269 | 78386074 | ID=Msa0524840-mRNA-1:exon:23249;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78386927 | 78387193 | 78386927 | ID=Msa0524840-mRNA-1:exon:23250;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78387290 | 78387635 | 78387290 | ID=Msa0524840-mRNA-1:exon:23251;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78387727 | 78387864 | 78387727 | ID=Msa0524840-mRNA-1:exon:23252;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78387948 | 78388073 | 78387948 | ID=Msa0524840-mRNA-1:exon:23253;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78388388 | 78388600 | 78388388 | ID=Msa0524840-mRNA-1:exon:23254;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78388747 | 78389011 | 78388747 | ID=Msa0524840-mRNA-1:exon:23255;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78389177 | 78389373 | 78389177 | ID=Msa0524840-mRNA-1:exon:23256;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78389718 | 78390017 | 78389718 | ID=Msa0524840-mRNA-1:exon:23257;Parent=Msa0524840-mRNA-1 |
chr3_4 | exon | 78390101 | 78391098 | 78390101 | ID=Msa0524840-mRNA-1:exon:23258;Parent=Msa0524840-mRNA-1 |
chr3_4 | five_prime_UTR | 78384508 | 78384731 | 78384508 | ID=Msa0524840-mRNA-1:five_prime_utr;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78384732 | 78384815 | 78384732 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78385018 | 78385213 | 78385018 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78385304 | 78385494 | 78385304 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78385879 | 78385990 | 78385879 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78386074 | 78386269 | 78386074 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78386927 | 78387193 | 78386927 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78387290 | 78387635 | 78387290 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78387727 | 78387864 | 78387727 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78387948 | 78388073 | 78387948 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78388388 | 78388600 | 78388388 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78388747 | 78389011 | 78388747 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78389177 | 78389373 | 78389177 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78389718 | 78390017 | 78389718 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | CDS | 78390101 | 78390688 | 78390101 | ID=Msa0524840-mRNA-1:cds;Parent=Msa0524840-mRNA-1 |
chr3_4 | three_prime_UTR | 78390689 | 78391098 | 78390689 | ID=Msa0524840-mRNA-1:three_prime_utr;Parent=Msa0524840-mRNA-1 |
Gene Sequence |
Protein sequence |