AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0353500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353500 MtrunA17_Chr3g0088821 99.629 1078 4 0 1 1078 1 1078 0.0 2236
Msa0353500 MtrunA17_Chr8g0352231 87.315 1080 133 3 1 1078 1 1078 0.0 1923
Msa0353500 MtrunA17_Chr7g0267731 80.292 959 182 5 121 1078 34 986 0.0 1550
Msa0353500 MtrunA17_Chr3g0137951 68.363 1081 316 8 6 1078 25 1087 0.0 1509
Msa0353500 MtrunA17_Chr4g0073711 66.297 1083 291 15 5 1078 21 1038 0.0 1448
Msa0353500 MtrunA17_Chr8g0383701 64.201 1095 357 12 1 1078 19 1095 0.0 1429
Msa0353500 MtrunA17_Chr1g0201731 64.117 1098 350 14 1 1078 23 1096 0.0 1426
Msa0353500 MtrunA17_Chr2g0296991 63.352 1086 310 8 12 1078 28 1044 0.0 1412
Msa0353500 MtrunA17_Chr3g0078671 58.618 1085 388 12 1 1078 19 1049 0.0 1285
Msa0353500 MtrunA17_Chr2g0284211 68.764 890 247 11 198 1078 112 979 0.0 1270
Msa0353500 MtrunA17_Chr8g0379241 72.182 834 212 8 249 1078 174 991 0.0 1268
Msa0353500 MtrunA17_Chr1g0183381 67.063 841 250 6 238 1078 91 904 0.0 1211
Msa0353500 MtrunA17_Chr8g0364641 60.023 878 296 6 203 1078 157 981 0.0 1144
Msa0353500 MtrunA17_Chr8g0364641 60.870 69 27 0 11 79 27 95 4.07e-23 106
Msa0353500 MtrunA17_Chr5g0410641 50.613 897 334 16 244 1061 241 1107 0.0 875
Msa0353500 MtrunA17_Chr4g0039801 50.395 887 331 17 254 1061 272 1128 0.0 865
Msa0353500 MtrunA17_Chr1g0165411 48.701 885 338 13 254 1061 244 1089 0.0 831
Msa0353500 MtrunA17_Chr2g0297351 49.105 894 340 18 250 1063 154 1012 0.0 830
Msa0353500 MtrunA17_Chr7g0269741 49.270 891 345 18 251 1061 293 1156 0.0 827
Msa0353500 MtrunA17_Chr1g0165421 48.594 889 368 15 242 1061 249 1117 0.0 823
Msa0353500 MtrunA17_Chr7g0274751 43.757 857 280 23 254 1061 95 798 0.0 630
Msa0353500 MtrunA17_Chr2g0322361 33.898 767 415 16 300 1052 52 740 1.63e-132 419
Msa0353500 MtrunA17_Chr3g0102531 35.139 683 344 16 287 962 38 628 7.42e-128 407
Msa0353500 MtrunA17_Chr3g0102541 34.993 683 346 15 287 962 38 629 8.11e-128 407
Msa0353500 MtrunA17_Chr2g0322351 34.297 761 410 18 300 1052 49 727 2.15e-125 400
Msa0353500 MtrunA17_Chr2g0322371 32.471 773 423 18 300 1059 47 733 2.56e-125 400
Msa0353500 MtrunA17_Chr4g0025201 32.490 751 411 13 295 1031 43 711 3.30e-123 395
Msa0353500 MtrunA17_Chr3g0095791 29.328 774 438 15 270 1036 18 689 2.09e-109 356
Msa0353500 MtrunA17_Chr1g0186381 28.382 828 476 18 250 1055 5 737 4.07e-102 338
Msa0353500 MtrunA17_Chr3g0102551 38.168 393 216 8 270 648 23 402 9.42e-84 288
Msa0353500 MtrunA17_Chr3g0102551 29.642 307 199 9 755 1049 428 729 2.66e-32 135
Msa0353500 MtrunA17_Chr2g0322341 43.934 305 158 4 301 605 52 343 1.16e-81 270
Msa0353500 MtrunA17_Chr4g0046401 37.135 377 208 6 271 639 24 379 1.92e-73 258
Msa0353500 MtrunA17_Chr4g0046401 31.304 345 227 6 714 1052 390 730 3.44e-43 169
Msa0353500 MtrunA17_Chr2g0307191 33.493 418 228 9 271 681 19 393 2.45e-67 240
Msa0353500 MtrunA17_Chr2g0307191 26.994 326 224 7 720 1037 372 691 1.11e-30 129
Msa0353500 MtrunA17_Chr2g0298581 34.853 373 209 8 271 642 19 358 2.06e-65 234
Msa0353500 MtrunA17_Chr2g0298581 27.607 326 226 6 717 1036 369 690 3.26e-35 144
Msa0353500 MtrunA17_Chr3g0077511 34.060 367 210 4 271 637 19 353 9.42e-65 233
Msa0353500 MtrunA17_Chr3g0077511 27.052 329 228 6 717 1037 369 693 3.07e-37 150
Msa0353500 MtrunA17_Chr0c03g0490021 81.148 122 23 0 908 1029 1 122 1.44e-59 200
Msa0353500 MtrunA17_Chr2g0322331 31.978 369 236 7 693 1052 9 371 3.05e-54 194
Msa0353500 MtrunA17_Chr3g0126641 45.299 234 85 8 575 789 1 210 1.01e-50 177
Msa0353500 MtrunA17_Chr8g0355061 96.552 58 2 0 908 965 1 58 6.98e-33 121
Msa0353500 MtrunA17_Chr7g0252781 69.412 85 23 2 996 1078 6 89 1.77e-32 121
Msa0353500 MtrunA17_Chr2g0307241 39.375 160 88 3 271 430 19 169 3.38e-31 122
Msa0353500 MtrunA17_Chr3g0094861 32.328 232 126 5 7 220 23 241 9.69e-29 118
Msa0353500 MtrunA17_Chr7g0267741 56.716 67 29 0 13 79 1 67 7.89e-26 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353500 AT5G05170.1 85.065 1078 147 7 2 1078 1 1065 0.0 1900
Msa0353500 AT4G32410.1 68.697 1067 302 11 5 1063 23 1065 0.0 1506
Msa0353500 AT2G25540.1 67.389 1061 314 12 5 1064 17 1046 0.0 1483
Msa0353500 AT5G17420.1 67.195 1073 274 14 11 1078 27 1026 0.0 1460
Msa0353500 AT5G44030.2 64.717 1094 324 11 15 1078 17 1078 0.0 1431
Msa0353500 AT5G44030.1 64.899 1094 293 14 15 1078 17 1049 0.0 1424
Msa0353500 AT5G09870.1 64.154 1088 342 14 1 1078 19 1068 0.0 1417
Msa0353500 AT5G64740.1 63.886 1091 355 13 1 1078 19 1083 0.0 1410
Msa0353500 AT2G21770.1 62.182 1100 362 14 1 1078 19 1086 0.0 1388
Msa0353500 AT4G39350.1 63.636 1089 360 10 1 1078 19 1082 0.0 1379
Msa0353500 AT4G18780.1 61.049 1068 316 18 18 1078 6 980 0.0 1265
Msa0353500 AT5G44030.3 74.611 772 165 6 336 1078 1 770 0.0 1194
Msa0353500 AT3G03050.1 50.056 885 335 18 254 1061 277 1131 0.0 855
Msa0353500 AT5G16910.1 49.718 885 335 18 254 1061 280 1131 0.0 841
Msa0353500 AT4G38190.1 48.912 873 358 14 250 1063 251 1094 0.0 835
Msa0353500 AT1G02730.1 49.833 897 344 18 248 1061 295 1168 0.0 835
Msa0353500 AT2G33100.2 48.216 925 359 19 225 1061 132 1024 0.0 830
Msa0353500 AT2G33100.1 48.216 925 359 19 225 1061 132 1024 0.0 830
Msa0353500 AT1G32180.1 47.919 889 372 16 244 1059 96 966 0.0 804
Msa0353500 AT1G32180.2 47.919 889 372 16 244 1059 96 966 0.0 804
Msa0353500 AT2G32530.1 32.294 802 437 18 255 1033 10 728 1.57e-124 399
Msa0353500 AT2G32620.1 33.333 759 404 18 299 1033 50 730 1.52e-122 394
Msa0353500 AT4G15320.3 33.002 806 426 21 255 1031 10 730 1.56e-121 391
Msa0353500 AT4G15320.5 33.002 806 426 21 255 1031 10 730 1.74e-121 391
Msa0353500 AT2G32540.1 31.847 785 430 16 298 1057 49 753 9.02e-121 389
Msa0353500 AT2G32610.1 30.566 831 466 19 255 1057 10 757 1.03e-118 384
Msa0353500 AT4G15320.4 32.883 815 430 22 255 1031 10 745 1.52e-118 384
Msa0353500 AT2G32620.3 36.210 591 298 13 299 884 50 566 7.88e-113 363
Msa0353500 AT4G15290.1 32.457 761 404 19 299 1031 50 728 9.28e-113 367
Msa0353500 AT2G32620.4 32.908 705 379 16 352 1033 1 634 1.17e-110 359
Msa0353500 AT4G15320.2 32.376 766 367 20 255 967 10 677 4.85e-106 350
Msa0353500 AT2G32620.2 35.993 539 267 12 299 832 50 515 1.18e-100 328
Msa0353500 AT4G15320.1 31.172 802 372 21 255 967 10 720 9.48e-99 332
Msa0353500 AT1G55850.1 41.775 383 199 8 264 639 26 391 9.20e-86 293
Msa0353500 AT1G55850.1 29.114 316 210 7 744 1049 408 719 2.42e-33 139
Msa0353500 AT4G24010.1 38.560 389 213 9 263 643 19 389 6.23e-78 272
Msa0353500 AT4G24010.1 32.450 302 194 4 739 1035 408 704 1.25e-42 168
Msa0353500 AT4G23990.1 38.182 385 214 8 263 639 38 406 3.08e-76 267
Msa0353500 AT4G23990.1 33.010 309 195 5 731 1033 419 721 1.41e-43 171
Msa0353500 AT4G24000.1 37.113 388 213 9 263 643 16 379 1.19e-73 259
Msa0353500 AT4G24000.1 31.650 297 189 6 744 1033 403 692 1.58e-40 161
Msa0353500 AT4G23990.2 33.010 309 195 5 731 1033 205 507 6.18e-44 168
Msa0353500 AT4G23990.2 43.750 192 99 5 455 639 3 192 1.28e-38 152
Msa0353500 AT4G24000.2 30.408 319 206 7 744 1053 211 522 5.41e-41 159
Msa0353500 AT4G24000.2 44.103 195 93 6 455 643 3 187 5.04e-39 154

Find 300 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAGCTTGCTGCATTTAA+AGG 0.096133 3_1:+23615612 Msa0353500:CDS
GGTGGAGAAATGAACAATTT+TGG 0.098473 3_1:+23616805 Msa0353500:CDS
CCCCTTCCTTAAAGGTCTTA+TGG 0.130024 3_1:+23617124 Msa0353500:CDS
AATTAGAATCAAATTATTTA+AGG 0.150758 3_1:+23617449 Msa0353500:three_prime_UTR
CATCTTTACCCCTTCCTTAA+AGG 0.173534 3_1:+23617116 Msa0353500:CDS
GCCTCCTTGAGAAGAGTTTC+TGG 0.183016 3_1:-23615321 None:intergenic
GAAACTTCCTTATCATAATT+TGG 0.223992 3_1:-23610816 None:intergenic
CGGTTCACTGGAAGCCATTT+GGG 0.226109 3_1:-23611861 None:intergenic
TTCAATAGAACTGCTTTATA+TGG 0.227409 3_1:+23614511 Msa0353500:CDS
GTCACAGAAGATATTCTTAC+TGG 0.248797 3_1:+23615546 Msa0353500:CDS
CGTTTCCCGCGAGCATTTAC+AGG 0.254624 3_1:-23611036 None:intergenic
CGATGGTTGGCGTTCGGTTC+TGG 0.263817 3_1:-23617151 None:intergenic
CCCTTCCTTAAAGGTCTTAT+GGG 0.269390 3_1:+23617125 Msa0353500:CDS
TGCATCACCCATCCTTCTTC+AGG 0.270437 3_1:-23612871 None:intergenic
CAGAACTATACATGTTTAAA+TGG 0.279204 3_1:+23616949 Msa0353500:CDS
CCAGTGACTCTTGTCGTAAA+AGG 0.288714 3_1:-23617233 None:intergenic
ATCTGGACAGGCTTTCATTA+AGG 0.290463 3_1:+23611892 Msa0353500:CDS
GCTCTTCTCAGATGCTAATA+AGG 0.292059 3_1:-23609683 None:intergenic
CATCAGAATTTGCAAGGAAA+TGG 0.294257 3_1:+23612520 Msa0353500:CDS
TGGTCTCTGGTGTTGTTTCC+AGG 0.294599 3_1:-23612910 None:intergenic
CAGTACTGTTGATCCGTTAA+AGG 0.296186 3_1:+23612371 Msa0353500:CDS
GATTCCACACATCTCAGATT+TGG 0.300166 3_1:-23617258 None:intergenic
CCACAGATTGGATGGATCTA+TGG 0.301478 3_1:+23615519 Msa0353500:intron
TATTCATTCCTTGCTTCAAT+TGG 0.305094 3_1:+23609167 Msa0353500:five_prime_UTR
CAAGTGCTTCGATGGGCTTT+AGG 0.318223 3_1:+23615669 Msa0353500:CDS
TTAGTAACATTGCAAGTATA+TGG 0.321656 3_1:+23616706 Msa0353500:CDS
TCAGGTAGTCCTGCAATTCT+TGG 0.322057 3_1:+23610651 Msa0353500:intron
TATCAGTTATATGTGAAGTT+TGG 0.322604 3_1:+23611808 Msa0353500:CDS
ATTAAATTATGTGCAGTTGA+TGG 0.324608 3_1:+23617408 Msa0353500:three_prime_UTR
TTGTGGTGTTTGTGCCTTCC+CGG 0.334481 3_1:+23609969 Msa0353500:CDS
CTCTCAAGATCTTATCTTTG+AGG 0.338952 3_1:+23609203 Msa0353500:five_prime_UTR
GGCGTCCCATAAGACCTTTA+AGG 0.342891 3_1:-23617130 None:intergenic
GCCTCTACACTTATGGAAAA+TGG 0.345356 3_1:+23615276 Msa0353500:CDS
CGCCAACCATCGTGGTTGTT+TGG 0.345579 3_1:+23617162 Msa0353500:CDS
CAATCATGGGGACCACTCTT+TGG 0.354231 3_1:+23617062 Msa0353500:CDS
TTTCTTTCCATCTTTGCAAC+TGG 0.356774 3_1:+23616741 Msa0353500:CDS
CAATTTCCACAGAGGTTTGA+TGG 0.357048 3_1:+23613951 Msa0353500:CDS
ACGGTTCACTGGAAGCCATT+TGG 0.361654 3_1:-23611862 None:intergenic
ATTCCACACATCTCAGATTT+GGG 0.365840 3_1:-23617257 None:intergenic
CAGTATTGGCTGTCACAATT+GGG 0.370306 3_1:-23612398 None:intergenic
AGGTTTCTATTCCATCTTCT+AGG 0.371247 3_1:+23611679 Msa0353500:CDS
AACCTTGTCGGAGTTGTTGC+AGG 0.374614 3_1:+23617011 Msa0353500:CDS
TCACGATCTCCAAGAATTGC+AGG 0.374891 3_1:-23610660 None:intergenic
TGAATTGTACTTGAAGTCAT+TGG 0.375703 3_1:-23610709 None:intergenic
GTATCAGCTGTGCTTACTAA+TGG 0.381961 3_1:+23613816 Msa0353500:CDS
TTTCTGTCGGTCAATTAGAT+TGG 0.382304 3_1:+23609097 Msa0353500:five_prime_UTR
ACCTTTAAATGCAGCAAGCT+TGG 0.384857 3_1:-23615613 None:intergenic
ACAGTATTGGCTGTCACAAT+TGG 0.385360 3_1:-23612399 None:intergenic
CGATATTATCACCACAAATC+TGG 0.387882 3_1:-23609915 None:intergenic
TGAACTACCTGGATCATTCC+TGG 0.393323 3_1:-23612934 None:intergenic
GCTACTTCTGAAAGAGGAAT+AGG 0.394800 3_1:+23611310 Msa0353500:CDS
GCCACTCACAAGTGCATTCA+TGG 0.396016 3_1:-23613417 None:intergenic
TTCCCTATGCAGCAAACATC+AGG 0.396400 3_1:+23611185 Msa0353500:intron
TTTGTGCCTTCCCGGTTTGT+AGG 0.399527 3_1:+23609977 Msa0353500:CDS
AGTGAACCGTGAAACATATC+TGG 0.403742 3_1:+23611875 Msa0353500:CDS
TCATAACACGGCCTACAAAC+CGG 0.405113 3_1:-23609988 None:intergenic
GGTTTACTCAAAGTACTTGC+TGG 0.408887 3_1:+23616870 Msa0353500:CDS
TGGGTACGGGATTTGTAATT+CGG 0.409998 3_1:-23611764 None:intergenic
CCTTTAAATGCAGCAAGCTT+GGG 0.412595 3_1:-23615612 None:intergenic
ATGAGCCTTGAGAGAAGGTT+TGG 0.415751 3_1:+23615234 Msa0353500:CDS
TTTATAATGAGAAGAGTTGT+TGG 0.416640 3_1:-23616990 None:intergenic
GAATTCAAAATTCGTATCAA+TGG 0.417011 3_1:+23612823 Msa0353500:CDS
TTATTGTTAAATTATTCATC+AGG 0.420403 3_1:+23617526 Msa0353500:three_prime_UTR
GATCATTCCTGGATGGTCTC+TGG 0.420551 3_1:-23612923 None:intergenic
ACATCCAGTACCCACATAAA+CGG 0.421617 3_1:-23614485 None:intergenic
GCATCACCCATCCTTCTTCA+GGG 0.425061 3_1:-23612870 None:intergenic
GAAAATAAAAGCTGGCAGAT+TGG 0.427537 3_1:+23617291 Msa0353500:three_prime_UTR
CATTCAAGGTCCCGTTTATG+TGG 0.427944 3_1:+23614474 Msa0353500:CDS
CTTCTCATTATAAACCTTGT+CGG 0.428224 3_1:+23616999 Msa0353500:CDS
CAGGGTTGCTGAACCAGGAT+TGG 0.428474 3_1:+23611204 Msa0353500:CDS
AATATCGGTAGTGCTGTTAA+TGG 0.429211 3_1:+23609931 Msa0353500:CDS
AAGGATACCAGTTGCAAAGA+TGG 0.431433 3_1:-23616748 None:intergenic
AGAGGTTTGATGGTATTGAT+AGG 0.435261 3_1:+23613961 Msa0353500:CDS
GAATAATGAACTTGTTAGTC+AGG 0.438114 3_1:-23615848 None:intergenic
GTCTAGAGGATATAGAAGAA+GGG 0.441165 3_1:+23614686 Msa0353500:CDS
TTAACAGTGGCTACCAATCA+TGG 0.441450 3_1:+23617048 Msa0353500:CDS
CAGATTTGTGGTGATAATAT+CGG 0.441920 3_1:+23609916 Msa0353500:CDS
ATCAGAATTTGCAAGGAAAT+GGG 0.442885 3_1:+23612521 Msa0353500:CDS
CCCATCTGGTACGGTTATAG+TGG 0.443405 3_1:+23615723 Msa0353500:CDS
CAAAGAGTGGTCCCCATGAT+TGG 0.443750 3_1:-23617061 None:intergenic
AGAGGGTTGGATGGCATTCA+AGG 0.444572 3_1:+23614460 Msa0353500:CDS
GCCTGTCCAGATATGTTTCA+CGG 0.447132 3_1:-23611881 None:intergenic
CTGGTGTTGTTTCCAGGCCA+AGG 0.447928 3_1:-23612904 None:intergenic
AATCACATTCCTCGGCTAAC+CGG 0.449192 3_1:+23610843 Msa0353500:CDS
CTTATATTCCACAGATTGGA+TGG 0.454413 3_1:+23615511 Msa0353500:intron
AGAAGAGGAATGGAAGTGAT+TGG 0.455688 3_1:-23615795 None:intergenic
CCTTGCAAATTCTGATGTCT+CGG 0.456081 3_1:-23612514 None:intergenic
GTTTCTCGTGAAAAGCGTCC+AGG 0.460415 3_1:+23613368 Msa0353500:CDS
ATTCATTCCTTGCTTCAATT+GGG 0.461337 3_1:+23609168 Msa0353500:five_prime_UTR
GTAGCTTGACCTGTGCTCAT+TGG 0.461895 3_1:-23611292 None:intergenic
TCATGTTATGTCTCTGATGA+TGG 0.462966 3_1:+23612462 Msa0353500:CDS
AGATGCACGCCCGTGGTTGG+AGG 0.463013 3_1:+23615574 Msa0353500:CDS
AGATATGTTTCACGGTTCAC+TGG 0.465166 3_1:-23611873 None:intergenic
CTGATCCAATATCCAAGAAA+AGG 0.465433 3_1:-23611835 None:intergenic
TTATGAAGATAAATCAGAAT+GGG 0.466240 3_1:+23615365 Msa0353500:CDS
CATCCAGTACCCACATAAAC+GGG 0.467474 3_1:-23614484 None:intergenic
TGTTGACTACCCAGTGGATA+AGG 0.468108 3_1:+23612437 Msa0353500:CDS
CAAACACCACAAGCAATAAA+CGG 0.469512 3_1:-23609958 None:intergenic
GATCTTTGACAAATGATGCT+TGG 0.470277 3_1:-23612629 None:intergenic
AGTCTTGTTTCTTCACTTTG+CGG 0.473059 3_1:+23614571 Msa0353500:CDS
CAAGCTACATTACCCAATCC+TGG 0.473128 3_1:-23611217 None:intergenic
TGGGTAGTCAACAGCAAGAA+TGG 0.474760 3_1:-23612427 None:intergenic
ATCGAAAAGCACATCAGTAC+TGG 0.474835 3_1:-23611344 None:intergenic
AAACAACAGCAAAGCCTTGA+GGG 0.476052 3_1:+23613875 Msa0353500:CDS
TATGAGTATGAAAGGAAAGA+TGG 0.476280 3_1:+23610006 Msa0353500:CDS
ATGGACTCAGAAGGAGAAGC+TGG 0.476441 3_1:+23609722 Msa0353500:CDS
TTGCTACCCAACGTCTTCAT+CGG 0.477149 3_1:-23609886 None:intergenic
CAACCACGATGGTTGGCGTT+CGG 0.477716 3_1:-23617157 None:intergenic
CAGGAGACAGACGGCAGGTA+AGG 0.478428 3_1:-23615829 None:intergenic
AGGGTTGCTGAACCAGGATT+GGG 0.479793 3_1:+23611205 Msa0353500:CDS
ATTTCATATTTCTTGCAGAA+AGG 0.480569 3_1:-23612546 None:intergenic
GTTTGAACCAAGTGCTTCGA+TGG 0.481320 3_1:+23615661 Msa0353500:CDS
AAACGATCGGAAAGATTGAT+AGG 0.482216 3_1:-23615642 None:intergenic
GCAATTCATGTTATCAGTTG+TGG 0.482299 3_1:+23615342 Msa0353500:CDS
TATGCTTGGGTTTGATAGGA+GGG 0.483252 3_1:-23614540 None:intergenic
TTATGCTTGGGTTTGATAGG+AGG 0.485569 3_1:-23614541 None:intergenic
AAGCTCGACAACCACTTTCG+AGG 0.485682 3_1:+23611655 Msa0353500:CDS
GCATCTGAGAAGAGCTAAGT+AGG 0.485788 3_1:+23609691 Msa0353500:five_prime_UTR
AGTCTAGAGGATATAGAAGA+AGG 0.487352 3_1:+23614685 Msa0353500:CDS
GATATAGAAGAAGGGGTGGA+AGG 0.489730 3_1:+23614694 Msa0353500:CDS
TATTGGATCAGTTCCCCAAA+TGG 0.492173 3_1:+23611847 Msa0353500:CDS
AGACTAAAGACGGGCACAGT+TGG 0.492450 3_1:-23614667 None:intergenic
TAACCACAACGCATAAGCAT+TGG 0.493182 3_1:-23611784 None:intergenic
CAAAGATCGTAGAGCAATGA+AGG 0.495592 3_1:+23612644 Msa0353500:CDS
ACGCATGTTGAGTTGGCAAA+TGG 0.496488 3_1:+23610764 Msa0353500:CDS
AACATCAGGGTTGCTGAACC+AGG 0.497336 3_1:+23611199 Msa0353500:CDS
AACCACAACGCATAAGCATT+GGG 0.500114 3_1:-23611783 None:intergenic
CTTTAAGGAAGGGGTAAAGA+TGG 0.500917 3_1:-23617115 None:intergenic
TAAGTCGACATTGTCCCATC+TGG 0.504336 3_1:+23615709 Msa0353500:CDS
ATTTGAGTTGCAGATATGAT+CGG 0.504666 3_1:+23612307 Msa0353500:intron
TCTAGAGGATATAGAAGAAG+GGG 0.505946 3_1:+23614687 Msa0353500:CDS
TATGGATTTATCCTAGAAGA+TGG 0.506219 3_1:-23611690 None:intergenic
GAAGGTTAAAGTGGCTTGAG+AGG 0.507461 3_1:+23615745 Msa0353500:CDS
GTTATGAAGATAAATCAGAA+TGG 0.508333 3_1:+23615364 Msa0353500:CDS
AGAGGATATAGAAGAAGGGG+TGG 0.508591 3_1:+23614690 Msa0353500:CDS
CAGTGACTCTTGTCGTAAAA+GGG 0.508629 3_1:-23617232 None:intergenic
GGTCCCGTTTATGTGGGTAC+TGG 0.510704 3_1:+23614481 Msa0353500:CDS
CAGGATTGGGTAATGTAGCT+TGG 0.512080 3_1:+23611218 Msa0353500:CDS
ATGAGTATGAAAGGAAAGAT+GGG 0.512365 3_1:+23610007 Msa0353500:CDS
AGCAAAGTCTGCCAGATTTG+TGG 0.512403 3_1:+23609904 Msa0353500:CDS
TTTGAGTTGCAGATATGATC+GGG 0.512495 3_1:+23612308 Msa0353500:intron
ACTACAAGTACAAGAATGTT+CGG 0.513391 3_1:-23617552 None:intergenic
CAATCAAGATTCAATAAGAA+AGG 0.513986 3_1:-23613840 None:intergenic
CAGTATCAAGTCCTCCACTT+TGG 0.516644 3_1:-23613316 None:intergenic
CAAGATGGTACACCTTGGCC+TGG 0.516752 3_1:+23612892 Msa0353500:CDS
TTCTTGTGATGTTGGAACCC+TGG 0.517219 3_1:-23613386 None:intergenic
TGATGCTCCAAATTATGATA+AGG 0.517626 3_1:+23610809 Msa0353500:CDS
CACCGGCCTTCTTGTGATGT+TGG 0.518453 3_1:-23613394 None:intergenic
AAGAATGGATAGTACAGTAT+TGG 0.518904 3_1:-23612412 None:intergenic
TTGAGTTGGCAAATGGCGTA+TGG 0.519250 3_1:+23610771 Msa0353500:CDS
TAACAAGTTCATTATTCCAC+AGG 0.521586 3_1:+23615854 Msa0353500:CDS
CAAGTACTTTGAGTAAACCT+TGG 0.522532 3_1:-23616866 None:intergenic
TCAAAAGCTTCAGATGAAGA+TGG 0.524689 3_1:+23616918 Msa0353500:CDS
GATCTGAGTTGCTTCTGAAG+TGG 0.524780 3_1:+23609561 Msa0353500:intron
ATTAATAAAAGAGACTTGGA+TGG 0.525126 3_1:-23609122 None:intergenic
ACAGATAAACTTGAGAGGGT+TGG 0.525511 3_1:+23614447 Msa0353500:intron
TACCCAATGCTTATGCGTTG+TGG 0.527215 3_1:+23611781 Msa0353500:CDS
GGTCAAGCTACTTCTGAAAG+AGG 0.527295 3_1:+23611304 Msa0353500:CDS
TTTATGATGGATCCCAACCT+TGG 0.528266 3_1:+23613909 Msa0353500:CDS
CATAACACGGCCTACAAACC+GGG 0.530845 3_1:-23609987 None:intergenic
TTTCTCACAATCACATTCCT+CGG 0.532162 3_1:+23610835 Msa0353500:CDS
TGGCAAATGGCGTATGGGCG+AGG 0.534020 3_1:+23610777 Msa0353500:CDS
GCTTGGAAAGAAAGAGTTGA+TGG 0.535240 3_1:+23611235 Msa0353500:CDS
TTAAGATGCACGCCCGTGGT+TGG 0.535265 3_1:+23615571 Msa0353500:CDS
TGAAAGTCCCTGAAGAAGGA+TGG 0.535766 3_1:+23612863 Msa0353500:CDS
TAACATGAGACCTTATCCAC+TGG 0.536413 3_1:-23612447 None:intergenic
GATGCCATTGACATCCTCTC+AGG 0.536458 3_1:-23611012 None:intergenic
CTCAAATGAGCCTTGAGAGA+AGG 0.536480 3_1:+23615229 Msa0353500:CDS
GACCAAACAACCACGATGGT+TGG 0.536585 3_1:-23617164 None:intergenic
CTGCTAGAGAAAATAAAAGC+TGG 0.536682 3_1:+23617283 Msa0353500:exon
TCGACAACCACTTTCGAGGA+AGG 0.537065 3_1:+23611659 Msa0353500:CDS
AACGCATAAGCATTGGGTAC+GGG 0.538670 3_1:-23611777 None:intergenic
GGCCGTGTTATGAGTATGAA+AGG 0.538679 3_1:+23609998 Msa0353500:CDS
TATATCCTCTAGACTAAAGA+CGG 0.541324 3_1:-23614677 None:intergenic
TCCACTATAACCGTACCAGA+TGG 0.541495 3_1:-23615724 None:intergenic
GGTGATCCGTTTATTGCTTG+TGG 0.542345 3_1:+23609952 Msa0353500:CDS
CTAAAGCCCATCGAAGCACT+TGG 0.544352 3_1:-23615668 None:intergenic
TAACAGTGGCTACCAATCAT+GGG 0.547902 3_1:+23617049 Msa0353500:CDS
GTTATAGTGGAAGGTTAAAG+TGG 0.549497 3_1:+23615736 Msa0353500:CDS
TCGCAGAACGCATGTTGAGT+TGG 0.550049 3_1:+23610757 Msa0353500:CDS
GCAGTGAAAGTCCCTGAAGA+AGG 0.550431 3_1:+23612859 Msa0353500:CDS
GATAAGCCGATGAAGACGTT+GGG 0.550649 3_1:+23609880 Msa0353500:CDS
TCGATGGGCTTTAGGTTCAG+TGG 0.550773 3_1:+23615677 Msa0353500:CDS
AGTATTGGCTGTCACAATTG+GGG 0.552573 3_1:-23612397 None:intergenic
TTGTACAGATAAACTTGAGA+GGG 0.553327 3_1:+23614443 Msa0353500:intron
GGCGTATGGGCGAGGTGAGG+AGG 0.554311 3_1:+23610785 Msa0353500:CDS
CCATAAGACCTTTAAGGAAG+GGG 0.554857 3_1:-23617124 None:intergenic
ATAGAAACCTTCCTCGAAAG+TGG 0.554909 3_1:-23611666 None:intergenic
AAAGAAAACAGTATTACGAT+TGG 0.558410 3_1:-23613997 None:intergenic
TTCTTTGAAAAGTACCACTC+AGG 0.559012 3_1:-23612582 None:intergenic
TTAAGATCAGACGAATATGA+TGG 0.559054 3_1:-23611072 None:intergenic
AGACCATCCAGGAATGATCC+AGG 0.560854 3_1:+23612927 Msa0353500:CDS
CTGGTATCCTTGAGATGAGG+TGG 0.562369 3_1:+23616760 Msa0353500:CDS
AATATATAGACCTCCAACCA+CGG 0.565841 3_1:-23615584 None:intergenic
GGAAAGAAAGAGTTGATGGC+TGG 0.567591 3_1:+23611239 Msa0353500:CDS
TTGAACAACCTCTTGTCCAC+CGG 0.570119 3_1:-23610862 None:intergenic
GAAGATTAATAAAAGAGACT+TGG 0.570421 3_1:-23609126 None:intergenic
TTCCAACATCACAAGAAGGC+CGG 0.570676 3_1:+23613392 Msa0353500:CDS
TTTGAACCAAGTGCTTCGAT+GGG 0.570895 3_1:+23615662 Msa0353500:CDS
AATTGACTACTTGAAAGATA+AGG 0.572515 3_1:+23612605 Msa0353500:CDS
CTTGTTTCTTCACTTTGCGG+TGG 0.572905 3_1:+23614574 Msa0353500:CDS
CCCATAAGACCTTTAAGGAA+GGG 0.575370 3_1:-23617125 None:intergenic
TCCCATAAGACCTTTAAGGA+AGG 0.575968 3_1:-23617126 None:intergenic
ACCGTGAAACATATCTGGAC+AGG 0.576330 3_1:+23611880 Msa0353500:CDS
CCGAGACATCAGAATTTGCA+AGG 0.577067 3_1:+23612514 Msa0353500:CDS
CGACATTGTCCCATCTGGTA+CGG 0.577292 3_1:+23615714 Msa0353500:CDS
ATAATGAGAAGAGTTGTTGG+TGG 0.580121 3_1:-23616987 None:intergenic
GAGATGAGGTGGAGTGGTGT+TGG 0.580501 3_1:+23616771 Msa0353500:CDS
ACAATACATGAGAAGAGGAA+TGG 0.580732 3_1:-23615805 None:intergenic
AACTCCAGAAACTCTTCTCA+AGG 0.581296 3_1:+23615317 Msa0353500:CDS
AAGCACTTGGTTCAAACGAT+CGG 0.581399 3_1:-23615655 None:intergenic
CACCACTCCACCTCATCTCA+AGG 0.581452 3_1:-23616767 None:intergenic
GAAAGTCCCTGAAGAAGGAT+GGG 0.581544 3_1:+23612864 Msa0353500:CDS
TTCCTTTCATACTCATAACA+CGG 0.582429 3_1:-23610000 None:intergenic
TGGACTCAGAAGGAGAAGCT+GGG 0.582489 3_1:+23609723 Msa0353500:CDS
AATGGCGTATGGGCGAGGTG+AGG 0.582951 3_1:+23610782 Msa0353500:CDS
AGCTAAGTAGGAGACTATGA+TGG 0.585252 3_1:+23609703 Msa0353500:exon
ATTCAAGGTCCCGTTTATGT+GGG 0.586347 3_1:+23614475 Msa0353500:CDS
CTCACCTGAGAGGATGTCAA+TGG 0.586728 3_1:+23611008 Msa0353500:CDS
CACAAGTGCATTCATGGCAC+CGG 0.587864 3_1:-23613411 None:intergenic
GGAAGTGATTGGATAGATTG+TGG 0.589300 3_1:-23615784 None:intergenic
CTTGGAGATCGTGAAGAGGA+TGG 0.590122 3_1:+23610669 Msa0353500:CDS
ATATATAGACCTCCAACCAC+GGG 0.590938 3_1:-23615583 None:intergenic
CGAGAAACATAGACTAAACG+TGG 0.591985 3_1:-23613353 None:intergenic
CCACTATAACCGTACCAGAT+GGG 0.592058 3_1:-23615723 None:intergenic
GGATAAGCCGATGAAGACGT+TGG 0.593259 3_1:+23609879 Msa0353500:intron
TAGGATAAATCCATACCGTA+TGG 0.594537 3_1:+23611698 Msa0353500:CDS
ACTGACCAAACCTTCTCTCA+AGG 0.595696 3_1:-23615239 None:intergenic
ATAAACTTGAGAGGGTTGGA+TGG 0.597909 3_1:+23614451 Msa0353500:CDS
TCGGCTAACCGGTGGACAAG+AGG 0.598073 3_1:+23610854 Msa0353500:CDS
CATCTCCTGTAAATGCTCGC+GGG 0.600452 3_1:+23611031 Msa0353500:CDS
CACATTCCTCGGCTAACCGG+TGG 0.601665 3_1:+23610846 Msa0353500:CDS
AAGAAAAGTTTACCAAAGAG+TGG 0.602401 3_1:-23617074 None:intergenic
CTACCTGGATCATTCCTGGA+TGG 0.604234 3_1:-23612930 None:intergenic
AGAATAATGACCATACGGTA+TGG 0.604646 3_1:-23611708 None:intergenic
GTGGTGTTGGAATTGATGAA+TGG 0.605403 3_1:+23616784 Msa0353500:CDS
TTGCAGATATGATCGGGAAG+GGG 0.606348 3_1:+23612314 Msa0353500:intron
CAACGCATAAGCATTGGGTA+CGG 0.606764 3_1:-23611778 None:intergenic
ACCGTATGGTCATTATTCTG+CGG 0.607361 3_1:+23611712 Msa0353500:CDS
AGTTGCAGATATGATCGGGA+AGG 0.608761 3_1:+23612312 Msa0353500:intron
GTTGCAGATATGATCGGGAA+GGG 0.608801 3_1:+23612313 Msa0353500:intron
TTTAAACATGTATAGTTCTG+CGG 0.608911 3_1:-23616946 None:intergenic
GCCGCAGAATAATGACCATA+CGG 0.609025 3_1:-23611713 None:intergenic
TCTGGTACGGTTATAGTGGA+AGG 0.609046 3_1:+23615727 Msa0353500:CDS
TTTGTACAGATAAACTTGAG+AGG 0.609294 3_1:+23614442 Msa0353500:intron
AGAAGAACCCAATTGAAGCA+AGG 0.609993 3_1:-23609175 None:intergenic
TTTCTCGTGAAAAGCGTCCA+GGG 0.610523 3_1:+23613369 Msa0353500:CDS
GCATCTCCTGTAAATGCTCG+CGG 0.611021 3_1:+23611030 Msa0353500:CDS
GTGTTGGAATTGATGAATGG+TGG 0.612024 3_1:+23616787 Msa0353500:CDS
TCAACGGCTGCTAACTGTGA+AGG 0.613255 3_1:-23612339 None:intergenic
AAGGTACAATACATGAGAAG+AGG 0.614509 3_1:-23615810 None:intergenic
TGTGCCCGTCTTTAGTCTAG+AGG 0.615832 3_1:+23614672 Msa0353500:CDS
AATACTGCTCCAATGAGCAC+AGG 0.619120 3_1:+23611283 Msa0353500:CDS
CAAAGTGAAGAAACAAGACT+AGG 0.620094 3_1:-23614568 None:intergenic
AAGTACCACTCAGGTGCTCG+TGG 0.621264 3_1:-23612573 None:intergenic
AACAACACCAGAGACCATCC+AGG 0.622703 3_1:+23612916 Msa0353500:CDS
GGATTTAAGATGCACGCCCG+TGG 0.624138 3_1:+23615567 Msa0353500:CDS
GGACTCAGAAGGAGAAGCTG+GGG 0.624216 3_1:+23609724 Msa0353500:CDS
AGTGGAGGACTTGATACTGA+TGG 0.626499 3_1:+23613320 Msa0353500:CDS
AACATGAGACCTTATCCACT+GGG 0.626855 3_1:-23612446 None:intergenic
ATCCTTGAGATGAGGTGGAG+TGG 0.629054 3_1:+23616765 Msa0353500:CDS
GAGACTATGATGGACTCAGA+AGG 0.631748 3_1:+23609713 Msa0353500:exon
TTCCTGCAACAACTCCGACA+AGG 0.632332 3_1:-23617013 None:intergenic
TCCCTATGCAGCAAACATCA+GGG 0.634130 3_1:+23611186 Msa0353500:intron
ATCTCTTATGCTGTTAACAG+TGG 0.635061 3_1:+23617035 Msa0353500:CDS
GGTTCACTGGAAGCCATTTG+GGG 0.636200 3_1:-23611860 None:intergenic
CATTGACATCCTCTCAGGTG+AGG 0.637861 3_1:-23611007 None:intergenic
TGAGTTGGCAAATGGCGTAT+GGG 0.637971 3_1:+23610772 Msa0353500:CDS
ATATCCTCTAGACTAAAGAC+GGG 0.638756 3_1:-23614676 None:intergenic
TAAACAACAGCAAAGCCTTG+AGG 0.639044 3_1:+23613874 Msa0353500:CDS
TAAATCAGAATGGGGAACTG+AGG 0.641261 3_1:+23615374 Msa0353500:CDS
TATGAAGATAAATCAGAATG+GGG 0.641391 3_1:+23615366 Msa0353500:CDS
AGGGTTCCAACATCACAAGA+AGG 0.641400 3_1:+23613388 Msa0353500:CDS
GTTTCTGGAGTTGCAGACTG+AGG 0.642413 3_1:-23615306 None:intergenic
GTATTGGCTGTCACAATTGG+GGG 0.644193 3_1:-23612396 None:intergenic
AAAACACATAGCTTCCCTCA+AGG 0.646852 3_1:-23613889 None:intergenic
TCTTGTCCACCGGTTAGCCG+AGG 0.648285 3_1:-23610852 None:intergenic
GAAGGATGGGTGATGCAAGA+TGG 0.649060 3_1:+23612877 Msa0353500:CDS
TCAATACCATCAAACCTCTG+TGG 0.656019 3_1:-23613957 None:intergenic
AATTCTTGGAGATCGTGAAG+AGG 0.657041 3_1:+23610665 Msa0353500:CDS
TTAGTCAGGAGACAGACGGC+AGG 0.667332 3_1:-23615834 None:intergenic
AACAGTGGCTACCAATCATG+GGG 0.668991 3_1:+23617050 Msa0353500:CDS
ACACGGCCTACAAACCGGGA+AGG 0.669111 3_1:-23609983 None:intergenic
TATCTGCAGCCTCACCTGAG+AGG 0.670320 3_1:+23610998 Msa0353500:CDS
ATACAATCACAACAGTTGAG+TGG 0.672869 3_1:-23617329 None:intergenic
CAACTGGTATCCTTGAGATG+AGG 0.672885 3_1:+23616757 Msa0353500:CDS
GCTATGTTCAATTTCCACAG+AGG 0.680463 3_1:+23613943 Msa0353500:CDS
CTTGTTAGTCAGGAGACAGA+CGG 0.681523 3_1:-23615838 None:intergenic
TCTTGCTGTTGACTACCCAG+TGG 0.682879 3_1:+23612431 Msa0353500:CDS
AGTACTGACGAAAATGTCAA+CGG 0.685284 3_1:-23612355 None:intergenic
GGTCCCAAATCTGAGATGTG+TGG 0.691197 3_1:+23617254 Msa0353500:CDS
TCCAGAAACTCTTCTCAAGG+AGG 0.693847 3_1:+23615320 Msa0353500:CDS
ACTCGATACAATAAGCACAA+AGG 0.699220 3_1:+23610054 Msa0353500:CDS
TCTACACTTATGGAAAATGG+TGG 0.703914 3_1:+23615279 Msa0353500:CDS
TTGAACCACGAGCACCTGAG+TGG 0.711643 3_1:+23612568 Msa0353500:CDS
GGTAGTGCAAGAAAATGACA+AGG 0.712905 3_1:-23611743 None:intergenic
TGATGCAAGATGGTACACCT+TGG 0.731034 3_1:+23612887 Msa0353500:CDS
GAACCGAACGCCAACCATCG+TGG 0.731065 3_1:+23617154 Msa0353500:CDS
AATGGACCAAACAACCACGA+TGG 0.733727 3_1:-23617168 None:intergenic
GGAGATCGTGAAGAGGATGG+TGG 0.741736 3_1:+23610672 Msa0353500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATAAAAAATATACTAA+TGG - chr3_1:23608949-23608968 None:intergenic 10.0%
!!! ATTTAAGTTTTTATGATAAT+TGG + chr3_1:23609259-23609278 Msa0353500:intron 10.0%
!!! TTTAAGTTTTTATGATAATT+GGG + chr3_1:23609260-23609279 Msa0353500:intron 10.0%
!!! ATTTATTTAATAGTTAGTTT+CGG + chr3_1:23612037-23612056 Msa0353500:intron 10.0%
!!! AATATTTTTTGTAATTAAAC+AGG + chr3_1:23613727-23613746 Msa0353500:intron 10.0%
!! TAAAAAACTACAAAAAATTT+CGG - chr3_1:23614347-23614366 None:intergenic 10.0%
!!! ACTTTCTTTTAAAAAAAAAA+TGG + chr3_1:23614760-23614779 Msa0353500:intron 10.0%
!! AATTAGAATCAAATTATTTA+AGG + chr3_1:23617449-23617468 Msa0353500:three_prime_UTR 10.0%
!! CATAAACAAAACAAAAAAAT+GGG - chr3_1:23609370-23609389 None:intergenic 15.0%
!! ACATAAACAAAACAAAAAAA+TGG - chr3_1:23609371-23609390 None:intergenic 15.0%
!!! TTTTATAACTTATTCTAGTT+TGG + chr3_1:23610406-23610425 Msa0353500:intron 15.0%
!! TTACTAGTTATATTTGAAAA+TGG - chr3_1:23610608-23610627 None:intergenic 15.0%
!! CTTATAATATAGCAAATAAA+AGG - chr3_1:23611940-23611959 None:intergenic 15.0%
!!! CTTTTATTTGCTATATTATA+AGG + chr3_1:23611938-23611957 Msa0353500:intron 15.0%
!! TAAAAGAAAAACTACAAATT+TGG - chr3_1:23612002-23612021 None:intergenic 15.0%
!! GAAACTAACTATTAAATAAA+TGG - chr3_1:23612038-23612057 None:intergenic 15.0%
!!! ACTTTATTAATTTGTCTTTT+TGG + chr3_1:23612956-23612975 Msa0353500:intron 15.0%
!!! GAGTTTATTAAATTTAAGTT+AGG + chr3_1:23613228-23613247 Msa0353500:intron 15.0%
!! TCAAAAATTGTAAAAGAAAA+TGG - chr3_1:23613534-23613553 None:intergenic 15.0%
!!! TTTTAAAAAAAAAATGGAGA+AGG + chr3_1:23614766-23614785 Msa0353500:intron 15.0%
!! TTTAAAAAAAAAATGGAGAA+GGG + chr3_1:23614767-23614786 Msa0353500:intron 15.0%
!! TTATGAATAAGTATATAATC+AGG - chr3_1:23615115-23615134 None:intergenic 15.0%
!! TAATTATCTTCAAAGATAAT+TGG - chr3_1:23615483-23615502 None:intergenic 15.0%
!! ATTTAAAAGAATTAACATGA+CGG - chr3_1:23615948-23615967 None:intergenic 15.0%
!!! ATGTTCAATATATTGTTTTA+TGG + chr3_1:23616275-23616294 Msa0353500:intron 15.0%
!! TTATTGTTAAATTATTCATC+AGG + chr3_1:23617526-23617545 Msa0353500:three_prime_UTR 15.0%
!!! TTACAGATTTTTTTCTTATT+TGG + chr3_1:23617593-23617612 Msa0353500:three_prime_UTR 15.0%
!!! TTGTTTTGTTTATGTTTAAG+TGG + chr3_1:23609376-23609395 Msa0353500:intron 20.0%
!!! TTTCATATTGGATCTTTTAT+AGG + chr3_1:23610103-23610122 Msa0353500:intron 20.0%
!!! ACTGAGTTTGATTTATTAAA+GGG - chr3_1:23610163-23610182 None:intergenic 20.0%
!!! CTAATCATTTAAATGGTTTT+GGG - chr3_1:23610457-23610476 None:intergenic 20.0%
!!! TCTAATCATTTAAATGGTTT+TGG - chr3_1:23610458-23610477 None:intergenic 20.0%
!! CAATGATCTAATCATTTAAA+TGG - chr3_1:23610464-23610483 None:intergenic 20.0%
!! ATTTCATTGATGAAACAAAA+TGG - chr3_1:23610510-23610529 None:intergenic 20.0%
!! GTTATATTTGAAAATGGTAA+AGG - chr3_1:23610602-23610621 None:intergenic 20.0%
!! ATGGAAACAATATTATATAG+AGG - chr3_1:23610895-23610914 None:intergenic 20.0%
!! TATTGTTCAAATTGATACTA+TGG - chr3_1:23610914-23610933 None:intergenic 20.0%
!! CATTTAATTCAAAATCTGTT+GGG - chr3_1:23610940-23610959 None:intergenic 20.0%
!! ACATTTAATTCAAAATCTGT+TGG - chr3_1:23610941-23610960 None:intergenic 20.0%
!!! TGTTATCTGATATTGATTTT+AGG + chr3_1:23611150-23611169 Msa0353500:intron 20.0%
!!! AATGCATATCTTTTGTTTTT+AGG + chr3_1:23611594-23611613 Msa0353500:intron 20.0%
!! CAATATTAAAAATACTCGTA+AGG - chr3_1:23612123-23612142 None:intergenic 20.0%
!! GTGCATTATAAAATTTATGA+AGG - chr3_1:23612205-23612224 None:intergenic 20.0%
!!! TTATATTTTTTCTTCTGTCT+TGG + chr3_1:23612705-23612724 Msa0353500:intron 20.0%
!!! TATTAATTTGTCTTTTTGGT+TGG + chr3_1:23612960-23612979 Msa0353500:intron 20.0%
!! TCTAAAAATTTAATCCATCT+AGG - chr3_1:23613069-23613088 None:intergenic 20.0%
!!! TAGATGGATTAAATTTTTAG+AGG + chr3_1:23613068-23613087 Msa0353500:intron 20.0%
!!! AGATGGATTAAATTTTTAGA+GGG + chr3_1:23613069-23613088 Msa0353500:intron 20.0%
!!! TAAGATTTCAGAATTTTCTA+TGG - chr3_1:23613442-23613461 None:intergenic 20.0%
!!! ATAGAAAATTCTGAAATCTT+AGG + chr3_1:23613441-23613460 Msa0353500:intron 20.0%
!!! TAGAAAATTCTGAAATCTTA+GGG + chr3_1:23613442-23613461 Msa0353500:intron 20.0%
!!! TTCATTTTAAATTGCTAACA+AGG - chr3_1:23613689-23613708 None:intergenic 20.0%
!! TAGATGATTCATTACAATAA+GGG - chr3_1:23614119-23614138 None:intergenic 20.0%
!! ATAGATGATTCATTACAATA+AGG - chr3_1:23614120-23614139 None:intergenic 20.0%
!!! AAAATGAATTTTATGCTATC+AGG + chr3_1:23614279-23614298 Msa0353500:intron 20.0%
!!! GTAGTTTTTTAGAAATGTTA+AGG + chr3_1:23614356-23614375 Msa0353500:intron 20.0%
!!! TTTAGAAATGTTAAGGTATT+AGG + chr3_1:23614363-23614382 Msa0353500:intron 20.0%
!!! TTAGAAATGTTAAGGTATTA+GGG + chr3_1:23614364-23614383 Msa0353500:intron 20.0%
!! TTAAAAAAAAAATGGAGAAG+GGG + chr3_1:23614768-23614787 Msa0353500:intron 20.0%
!!! AGTGGTAAAAATATTTTAAC+AGG - chr3_1:23614939-23614958 None:intergenic 20.0%
!!! TTAACTCAACCATTTTATTT+AGG + chr3_1:23615171-23615190 Msa0353500:intron 20.0%
!! TTATGAAGATAAATCAGAAT+GGG + chr3_1:23615365-23615384 Msa0353500:CDS 20.0%
!! TAAAAAAGCAACAAAAGTAA+TGG - chr3_1:23615422-23615441 None:intergenic 20.0%
!! TATAACTAAAAATCAAAGAG+TGG + chr3_1:23616004-23616023 Msa0353500:intron 20.0%
!! AAATAATTGTTAACCAACAA+AGG - chr3_1:23616393-23616412 None:intergenic 20.0%
!!! TTGTTGGTTAACAATTATTT+TGG + chr3_1:23616393-23616412 Msa0353500:intron 20.0%
!! ATTAGACATTTCAATTTACA+AGG - chr3_1:23616534-23616553 None:intergenic 20.0%
!! ATTAGACATTTCAATTTACA+AGG - chr3_1:23616534-23616553 None:intergenic 20.0%
!! TTAAATATGTTACCAGAAAA+AGG - chr3_1:23616653-23616672 None:intergenic 20.0%
!!! TAAACTTTTCTTTGCATTTT+GGG + chr3_1:23617085-23617104 Msa0353500:CDS 20.0%
!!! ATCCATTTTTTCACTTTTAT+GGG + chr3_1:23617199-23617218 Msa0353500:CDS 20.0%
!!! ATTTCTATTCTTTTGTTTAC+AGG + chr3_1:23617350-23617369 Msa0353500:three_prime_UTR 20.0%
!!! TTGAATATATATCCCTTTTT+TGG + chr3_1:23617493-23617512 Msa0353500:three_prime_UTR 20.0%
!!! TGAATATATATCCCTTTTTT+GGG + chr3_1:23617494-23617513 Msa0353500:three_prime_UTR 20.0%
! ATTAATAAAAGAGACTTGGA+TGG - chr3_1:23609125-23609144 None:intergenic 25.0%
! GAAGATTAATAAAAGAGACT+TGG - chr3_1:23609129-23609148 None:intergenic 25.0%
! TTAATCTTGAGTTAAGATCA+AGG + chr3_1:23609338-23609357 Msa0353500:intron 25.0%
! TAATCTTGAGTTAAGATCAA+GGG + chr3_1:23609339-23609358 Msa0353500:intron 25.0%
! GTTTAAGTGGTTAAATTTCA+TGG + chr3_1:23609389-23609408 Msa0353500:intron 25.0%
! TGGTTAAATTTCATGGTTTA+AGG + chr3_1:23609396-23609415 Msa0353500:intron 25.0%
! ATCATCAACAATTTGCAAAT+TGG - chr3_1:23609483-23609502 None:intergenic 25.0%
!! TAGTTTAAGAAGTTGTTGTT+TGG + chr3_1:23609797-23609816 Msa0353500:intron 25.0%
!!! AGTTTAAGAAGTTGTTGTTT+GGG + chr3_1:23609798-23609817 Msa0353500:intron 25.0%
! ATAAGCACAAAGGTAAAATA+TGG + chr3_1:23610064-23610083 Msa0353500:intron 25.0%
! TAAGCACAAAGGTAAAATAT+GGG + chr3_1:23610065-23610084 Msa0353500:intron 25.0%
! AAATCTGTTGTCTTTCATAT+TGG + chr3_1:23610091-23610110 Msa0353500:intron 25.0%
!! GACTGAGTTTGATTTATTAA+AGG - chr3_1:23610164-23610183 None:intergenic 25.0%
!!! ATAACTTATTCTAGTTTGGT+TGG + chr3_1:23610410-23610429 Msa0353500:intron 25.0%
!! ATTGATAATATTCATCTTGC+AGG - chr3_1:23610539-23610558 None:intergenic 25.0%
!! ACGCTTATTTAATTGATTTC+AGG + chr3_1:23610633-23610652 Msa0353500:intron 25.0%
! GAAACTTCCTTATCATAATT+TGG - chr3_1:23610819-23610838 None:intergenic 25.0%
! AAACAGTACACATTCTTATT+GGG - chr3_1:23611399-23611418 None:intergenic 25.0%
! TACAACATATTTATCAGTCA+CGG - chr3_1:23611515-23611534 None:intergenic 25.0%
!!! CTTAACACTTTGTTTTGATT+AGG + chr3_1:23611625-23611644 Msa0353500:intron 25.0%
! TATCAGTTATATGTGAAGTT+TGG + chr3_1:23611808-23611827 Msa0353500:CDS 25.0%
! GAGTTAAATGAGAAAGTTTA+TGG - chr3_1:23612183-23612202 None:intergenic 25.0%
! ATTTCATATTTCTTGCAGAA+AGG - chr3_1:23612549-23612568 None:intergenic 25.0%
! AATTGACTACTTGAAAGATA+AGG + chr3_1:23612605-23612624 Msa0353500:CDS 25.0%
! GAATTCAAAATTCGTATCAA+TGG + chr3_1:23612823-23612842 Msa0353500:CDS 25.0%
! AATTAATAAAGTGAACTACC+TGG - chr3_1:23612948-23612967 None:intergenic 25.0%
!!! GATGGATTAAATTTTTAGAG+GGG + chr3_1:23613070-23613089 Msa0353500:intron 25.0%
!! TGTTTACGTTTGTGATTTTT+GGG + chr3_1:23613128-23613147 Msa0353500:intron 25.0%
!! AAATTTAAGTTAGGAGTTTG+AGG + chr3_1:23613237-23613256 Msa0353500:intron 25.0%
! ATTGTAAAAGAAAATGGTGA+GGG - chr3_1:23613528-23613547 None:intergenic 25.0%
! AATTGTAAAAGAAAATGGTG+AGG - chr3_1:23613529-23613548 None:intergenic 25.0%
!! GAAACAAGGAAACATTATTT+TGG - chr3_1:23613593-23613612 None:intergenic 25.0%
! AAAATACAATTTCGGAAACA+AGG - chr3_1:23613607-23613626 None:intergenic 25.0%
! TAGCAAGGAAAATACAATTT+CGG - chr3_1:23613615-23613634 None:intergenic 25.0%
! CAATCAAGATTCAATAAGAA+AGG - chr3_1:23613843-23613862 None:intergenic 25.0%
! AAAGAAAACAGTATTACGAT+TGG - chr3_1:23614000-23614019 None:intergenic 25.0%
! ATATTCATCTGATTTCTGTT+AGG + chr3_1:23614039-23614058 Msa0353500:intron 25.0%
! ATATTCAACTTCTTGAAGAA+CGG + chr3_1:23614088-23614107 Msa0353500:intron 25.0%
! AGATGATTCATTACAATAAG+GGG - chr3_1:23614118-23614137 None:intergenic 25.0%
!! ACCTAATAGCTTAATCTTTT+GGG - chr3_1:23614143-23614162 None:intergenic 25.0%
!! TAGAAATGTTAAGGTATTAG+GGG + chr3_1:23614365-23614384 Msa0353500:intron 25.0%
! AAGTTTATCTGTACAAAAAG+AGG - chr3_1:23614439-23614458 None:intergenic 25.0%
! TTCAATAGAACTGCTTTATA+TGG + chr3_1:23614511-23614530 Msa0353500:CDS 25.0%
! AGCAGGTAAAAATATTTAAC+AGG - chr3_1:23614725-23614744 None:intergenic 25.0%
! TAAAAAAAAAATGGAGAAGG+GGG + chr3_1:23614769-23614788 Msa0353500:intron 25.0%
!!! GCATAACTTTCTAGAATTTT+TGG + chr3_1:23615024-23615043 Msa0353500:intron 25.0%
! AGTATATAATCAGGAAAATG+AGG - chr3_1:23615106-23615125 None:intergenic 25.0%
! AAATGGTTGAGTTAAGAAAT+GGG - chr3_1:23615166-23615185 None:intergenic 25.0%
! AAAATGGTTGAGTTAAGAAA+TGG - chr3_1:23615167-23615186 None:intergenic 25.0%
! GTTATGAAGATAAATCAGAA+TGG + chr3_1:23615364-23615383 Msa0353500:CDS 25.0%
! TATGAAGATAAATCAGAATG+GGG + chr3_1:23615366-23615385 Msa0353500:CDS 25.0%
!!! AACCATTCGTCAATTTTTTT+TGG + chr3_1:23616044-23616063 Msa0353500:intron 25.0%
! ATCCAAAAAAAATTGACGAA+TGG - chr3_1:23616049-23616068 None:intergenic 25.0%
!!! TTCGTCAATTTTTTTTGGAT+AGG + chr3_1:23616049-23616068 Msa0353500:intron 25.0%
! TTAGTAACATTGCAAGTATA+TGG + chr3_1:23616706-23616725 Msa0353500:CDS 25.0%
!!! AATGAACAATTTTGGGTTAT+TGG + chr3_1:23616813-23616832 Msa0353500:CDS 25.0%
!! TTTAAACATGTATAGTTCTG+CGG - chr3_1:23616949-23616968 None:intergenic 25.0%
! CAGAACTATACATGTTTAAA+TGG + chr3_1:23616949-23616968 Msa0353500:CDS 25.0%
! TTTATAATGAGAAGAGTTGT+TGG - chr3_1:23616993-23617012 None:intergenic 25.0%
!! GTAAACTTTTCTTTGCATTT+TGG + chr3_1:23617084-23617103 Msa0353500:CDS 25.0%
!!! CATCCATTTTTTCACTTTTA+TGG + chr3_1:23617198-23617217 Msa0353500:CDS 25.0%
! AACCCATAAAAGTGAAAAAA+TGG - chr3_1:23617204-23617223 None:intergenic 25.0%
! ATTAAATTATGTGCAGTTGA+TGG + chr3_1:23617408-23617427 Msa0353500:three_prime_UTR 25.0%
! CTCTACACATTCAAAGTTTT+TGG - chr3_1:23609016-23609035 None:intergenic 30.0%
TATTCATTCCTTGCTTCAAT+TGG + chr3_1:23609167-23609186 Msa0353500:five_prime_UTR 30.0%
ATTCATTCCTTGCTTCAATT+GGG + chr3_1:23609168-23609187 Msa0353500:five_prime_UTR 30.0%
!! AAATTGTTGATGATGCTTGT+TGG + chr3_1:23609489-23609508 Msa0353500:intron 30.0%
AAACAAAGAATCAGATCACT+AGG - chr3_1:23609532-23609551 None:intergenic 30.0%
!!! ATCTGACAAGTTGATTTTGT+TGG + chr3_1:23609591-23609610 Msa0353500:five_prime_UTR 30.0%
!!! TCTGACAAGTTGATTTTGTT+GGG + chr3_1:23609592-23609611 Msa0353500:five_prime_UTR 30.0%
!! AAGTTGATTTTGTTGGGAAT+TGG + chr3_1:23609598-23609617 Msa0353500:five_prime_UTR 30.0%
TGATGTTTAGTGACAAATTG+TGG + chr3_1:23609838-23609857 Msa0353500:intron 30.0%
CAGATTTGTGGTGATAATAT+CGG + chr3_1:23609916-23609935 Msa0353500:CDS 30.0%
TTCCTTTCATACTCATAACA+CGG - chr3_1:23610003-23610022 None:intergenic 30.0%
TATGAGTATGAAAGGAAAGA+TGG + chr3_1:23610006-23610025 Msa0353500:CDS 30.0%
ATGAGTATGAAAGGAAAGAT+GGG + chr3_1:23610007-23610026 Msa0353500:CDS 30.0%
TTTGCTTGAGTAAAAGGTAA+TGG - chr3_1:23610267-23610286 None:intergenic 30.0%
AGTAACTTTGCTTGAGTAAA+AGG - chr3_1:23610273-23610292 None:intergenic 30.0%
ATAGATCAAGCAGTTTGAAT+GGG - chr3_1:23610340-23610359 None:intergenic 30.0%
TATAGATCAAGCAGTTTGAA+TGG - chr3_1:23610341-23610360 None:intergenic 30.0%
!! CATGATTAGTTCTATGACTT+AGG + chr3_1:23610364-23610383 Msa0353500:intron 30.0%
TGAATTGTACTTGAAGTCAT+TGG - chr3_1:23610712-23610731 None:intergenic 30.0%
TGATGCTCCAAATTATGATA+AGG + chr3_1:23610809-23610828 Msa0353500:CDS 30.0%
!!! TATCTTCTTTTTCAGACATC+TGG + chr3_1:23610970-23610989 Msa0353500:intron 30.0%
TTAAGATCAGACGAATATGA+TGG - chr3_1:23611075-23611094 None:intergenic 30.0%
!! ATATAGAAGTACTCACAACA+AGG - chr3_1:23611374-23611393 None:intergenic 30.0%
GAAACAGTACACATTCTTAT+TGG - chr3_1:23611400-23611419 None:intergenic 30.0%
TATGGATTTATCCTAGAAGA+TGG - chr3_1:23611693-23611712 None:intergenic 30.0%
AAATCAATTATGGCTCAGTT+TGG - chr3_1:23612291-23612310 None:intergenic 30.0%
TCTGCAACTCAAATCAATTA+TGG - chr3_1:23612301-23612320 None:intergenic 30.0%
!! ATTTGAGTTGCAGATATGAT+CGG + chr3_1:23612307-23612326 Msa0353500:intron 30.0%
AAGAATGGATAGTACAGTAT+TGG - chr3_1:23612415-23612434 None:intergenic 30.0%
ATCAGAATTTGCAAGGAAAT+GGG + chr3_1:23612521-23612540 Msa0353500:CDS 30.0%
AAAAGTTTCATCTACCTAGA+TGG + chr3_1:23613052-23613071 Msa0353500:intron 30.0%
GATAGGCAATAATATTACCT+AGG - chr3_1:23613100-23613119 None:intergenic 30.0%
! GTGTTTACGTTTGTGATTTT+TGG + chr3_1:23613127-23613146 Msa0353500:intron 30.0%
GAAAATACAGAAAGTTAGCA+AGG - chr3_1:23613630-23613649 None:intergenic 30.0%
TATCACAATTATTCACCACA+TGG + chr3_1:23613652-23613671 Msa0353500:intron 30.0%
ATCACAATTATTCACCACAT+GGG + chr3_1:23613653-23613672 Msa0353500:intron 30.0%
TTAAATTGCTAACAAGGAGA+TGG - chr3_1:23613683-23613702 None:intergenic 30.0%
TACATGTGTAGAGTAAGTAA+GGG - chr3_1:23613753-23613772 None:intergenic 30.0%
ACAGAAATATTGAACACGAA+TGG - chr3_1:23613785-23613804 None:intergenic 30.0%
!!! CAAACATTTTTTCCAAGGTT+GGG - chr3_1:23613924-23613943 None:intergenic 30.0%
!!! CATAGCAAACATTTTTTCCA+AGG - chr3_1:23613929-23613948 None:intergenic 30.0%
CTTTGATGTAAGTATCTTAC+AGG + chr3_1:23614016-23614035 Msa0353500:intron 30.0%
! TCTGATTTCTGTTAGGTTTT+AGG + chr3_1:23614046-23614065 Msa0353500:intron 30.0%
TATTCAACTTCTTGAAGAAC+GGG + chr3_1:23614089-23614108 Msa0353500:intron 30.0%
TCCCAAAAGATTAAGCTATT+AGG + chr3_1:23614139-23614158 Msa0353500:intron 30.0%
! CACCTAATAGCTTAATCTTT+TGG - chr3_1:23614144-23614163 None:intergenic 30.0%
! AAAATTTCGGAAGTGTACTT+CGG - chr3_1:23614334-23614353 None:intergenic 30.0%
TTTGTACAGATAAACTTGAG+AGG + chr3_1:23614442-23614461 Msa0353500:intron 30.0%
TTGTACAGATAAACTTGAGA+GGG + chr3_1:23614443-23614462 Msa0353500:intron 30.0%
! TTTTTATGCTTGGGTTTGAT+AGG - chr3_1:23614547-23614566 None:intergenic 30.0%
TATATCCTCTAGACTAAAGA+CGG - chr3_1:23614680-23614699 None:intergenic 30.0%
GTGAAATTCATATAGAAAGC+AGG - chr3_1:23614742-23614761 None:intergenic 30.0%
! TTTTTACCACTTGTAGTTGT+AGG + chr3_1:23614948-23614967 Msa0353500:intron 30.0%
TATAATCAGGAAAATGAGGA+CGG - chr3_1:23615102-23615121 None:intergenic 30.0%
AATCCAGCACCTAAATAAAA+TGG - chr3_1:23615183-23615202 None:intergenic 30.0%
AACTGAGGTACAAAACAAAA+TGG + chr3_1:23615389-23615408 Msa0353500:intron 30.0%
TTGTCTTATATTCCACAGAT+TGG + chr3_1:23615507-23615526 Msa0353500:intron 30.0%
!! GAATAATGAACTTGTTAGTC+AGG - chr3_1:23615851-23615870 None:intergenic 30.0%
TAACAAGTTCATTATTCCAC+AGG + chr3_1:23615854-23615873 Msa0353500:CDS 30.0%
GGCAAATGTTAATAAGTTAG+TGG + chr3_1:23616070-23616089 Msa0353500:intron 30.0%
!! AAGAATTTTAAGGAGGTTCA+GGG - chr3_1:23616112-23616131 None:intergenic 30.0%
!! AAAGAATTTTAAGGAGGTTC+AGG - chr3_1:23616113-23616132 None:intergenic 30.0%
!! ACATCGAAAGAATTTTAAGG+AGG - chr3_1:23616119-23616138 None:intergenic 30.0%
TCAAATTATCAGCATGTTGA+CGG + chr3_1:23616216-23616235 Msa0353500:intron 30.0%
!! TGGTTAGTTTGTCCTAAAAT+TGG + chr3_1:23616413-23616432 Msa0353500:intron 30.0%
! GTACGTGTATTTCCAATTTT+AGG - chr3_1:23616428-23616447 None:intergenic 30.0%
AAATTGGAAATACACGTACA+AGG + chr3_1:23616429-23616448 Msa0353500:intron 30.0%
! ACACAAGATCAAATTTTGAG+AGG - chr3_1:23616616-23616635 None:intergenic 30.0%
AATCTGCAAGTGAAATGAAA+GGG - chr3_1:23616688-23616707 None:intergenic 30.0%
TAATCTGCAAGTGAAATGAA+AGG - chr3_1:23616689-23616708 None:intergenic 30.0%
! GTGGAGAAATGAACAATTTT+GGG + chr3_1:23616806-23616825 Msa0353500:CDS 30.0%
CTTCTCATTATAAACCTTGT+CGG + chr3_1:23616999-23617018 Msa0353500:CDS 30.0%
AAGAAAAGTTTACCAAAGAG+TGG - chr3_1:23617077-23617096 None:intergenic 30.0%
AAAAATGGATGCAAGAAGAA+TGG - chr3_1:23617189-23617208 None:intergenic 30.0%
AAATAGCTTCTCCCAAAAAA+GGG - chr3_1:23617508-23617527 None:intergenic 30.0%
TAAATAGCTTCTCCCAAAAA+AGG - chr3_1:23617509-23617528 None:intergenic 30.0%
ACTACAAGTACAAGAATGTT+CGG - chr3_1:23617555-23617574 None:intergenic 30.0%
! GACTCTTTTTCTCTTTCTGT+CGG + chr3_1:23609084-23609103 Msa0353500:five_prime_UTR 35.0%
TTTCTGTCGGTCAATTAGAT+TGG + chr3_1:23609097-23609116 Msa0353500:five_prime_UTR 35.0%
CTCTCAAGATCTTATCTTTG+AGG + chr3_1:23609203-23609222 Msa0353500:five_prime_UTR 35.0%
!! TAAGAAGTTGTTGTTTGGGA+TGG + chr3_1:23609802-23609821 Msa0353500:intron 35.0%
CGATATTATCACCACAAATC+TGG - chr3_1:23609918-23609937 None:intergenic 35.0%
! AATATCGGTAGTGCTGTTAA+TGG + chr3_1:23609931-23609950 Msa0353500:CDS 35.0%
CAAACACCACAAGCAATAAA+CGG - chr3_1:23609961-23609980 None:intergenic 35.0%
ACTCGATACAATAAGCACAA+AGG + chr3_1:23610054-23610073 Msa0353500:CDS 35.0%
CAAACTCAGTCTTTCATTCT+TGG + chr3_1:23610173-23610192 Msa0353500:intron 35.0%
!! TTCTGCGATCTTTTGCTTTT+GGG - chr3_1:23610745-23610764 None:intergenic 35.0%
TTTCTCACAATCACATTCCT+CGG + chr3_1:23610835-23610854 Msa0353500:CDS 35.0%
! TGTGTATAGTTTGTGAGTGA+GGG - chr3_1:23611113-23611132 None:intergenic 35.0%
! ATGTGTATAGTTTGTGAGTG+AGG - chr3_1:23611114-23611133 None:intergenic 35.0%
GTGTACTGTTTCATTTCTGT+TGG + chr3_1:23611408-23611427 Msa0353500:intron 35.0%
GAGTTTCATAACTGCTGAAA+AGG - chr3_1:23611479-23611498 None:intergenic 35.0%
AGGTTTCTATTCCATCTTCT+AGG + chr3_1:23611679-23611698 Msa0353500:CDS 35.0%
TAGGATAAATCCATACCGTA+TGG + chr3_1:23611698-23611717 Msa0353500:CDS 35.0%
AGAATAATGACCATACGGTA+TGG - chr3_1:23611711-23611730 None:intergenic 35.0%
!!! AAGTTTGGTTTGCCTTTTCT+TGG + chr3_1:23611823-23611842 Msa0353500:CDS 35.0%
! GTTTGCCTTTTCTTGGATAT+TGG + chr3_1:23611830-23611849 Msa0353500:CDS 35.0%
CTGATCCAATATCCAAGAAA+AGG - chr3_1:23611838-23611857 None:intergenic 35.0%
AAAGGAGAGTCAAAACTCAA+GGG - chr3_1:23611922-23611941 None:intergenic 35.0%
AAAAGGAGAGTCAAAACTCA+AGG - chr3_1:23611923-23611942 None:intergenic 35.0%
!! TTTGAGTTGCAGATATGATC+GGG + chr3_1:23612308-23612327 Msa0353500:intron 35.0%
!! AGTACTGACGAAAATGTCAA+CGG - chr3_1:23612358-23612377 None:intergenic 35.0%
TCATGTTATGTCTCTGATGA+TGG + chr3_1:23612462-23612481 Msa0353500:CDS 35.0%
CATCAGAATTTGCAAGGAAA+TGG + chr3_1:23612520-23612539 Msa0353500:CDS 35.0%
!! TTCTTTGAAAAGTACCACTC+AGG - chr3_1:23612585-23612604 None:intergenic 35.0%
GATCTTTGACAAATGATGCT+TGG - chr3_1:23612632-23612651 None:intergenic 35.0%
GTAAAGAAGATTGACAGACA+TGG + chr3_1:23612666-23612685 Msa0353500:intron 35.0%
! CTAGGTAGATGAAACTTTTG+TGG - chr3_1:23613051-23613070 None:intergenic 35.0%
ACGTAAACACTAGAAACGAT+AGG - chr3_1:23613117-23613136 None:intergenic 35.0%
GTACATGTGTAGAGTAAGTA+AGG - chr3_1:23613754-23613773 None:intergenic 35.0%
! GTGTTCAATATTTCTGTCTC+AGG + chr3_1:23613788-23613807 Msa0353500:intron 35.0%
! GGAAGCTATGTGTTTTATGA+TGG + chr3_1:23613896-23613915 Msa0353500:CDS 35.0%
!!! GCAAACATTTTTTCCAAGGT+TGG - chr3_1:23613925-23613944 None:intergenic 35.0%
!! AGAGGTTTGATGGTATTGAT+AGG + chr3_1:23613961-23613980 Msa0353500:CDS 35.0%
GTACACTTCTGGACAAAATT+TGG + chr3_1:23614304-23614323 Msa0353500:intron 35.0%
TGTACAAAAAGAGGCAAGAT+GGG - chr3_1:23614430-23614449 None:intergenic 35.0%
! AGACTAGGCTTTTTATGCTT+GGG - chr3_1:23614556-23614575 None:intergenic 35.0%
! AAGACTAGGCTTTTTATGCT+TGG - chr3_1:23614557-23614576 None:intergenic 35.0%
CAAAGTGAAGAAACAAGACT+AGG - chr3_1:23614571-23614590 None:intergenic 35.0%
!! AGTCTTGTTTCTTCACTTTG+CGG + chr3_1:23614571-23614590 Msa0353500:CDS 35.0%
ATATCCTCTAGACTAAAGAC+GGG - chr3_1:23614679-23614698 None:intergenic 35.0%
AGTCTAGAGGATATAGAAGA+AGG + chr3_1:23614685-23614704 Msa0353500:CDS 35.0%
GTCTAGAGGATATAGAAGAA+GGG + chr3_1:23614686-23614705 Msa0353500:CDS 35.0%
TCTAGAGGATATAGAAGAAG+GGG + chr3_1:23614687-23614706 Msa0353500:CDS 35.0%
AATGAACCTTGTCCATTAGA+TGG - chr3_1:23614906-23614925 None:intergenic 35.0%
AATCATCCTACAACTACAAG+TGG - chr3_1:23614957-23614976 None:intergenic 35.0%
CTTGTAGTTGTAGGATGATT+TGG + chr3_1:23614957-23614976 Msa0353500:intron 35.0%
!! CAACCATTTTATTTAGGTGC+TGG + chr3_1:23615177-23615196 Msa0353500:intron 35.0%
! TTTTGTTGCCTCTACACTTA+TGG + chr3_1:23615269-23615288 Msa0353500:CDS 35.0%
! ACCATTTTCCATAAGTGTAG+AGG - chr3_1:23615280-23615299 None:intergenic 35.0%
TCTACACTTATGGAAAATGG+TGG + chr3_1:23615279-23615298 Msa0353500:CDS 35.0%
GCAATTCATGTTATCAGTTG+TGG + chr3_1:23615342-23615361 Msa0353500:CDS 35.0%
CTTATATTCCACAGATTGGA+TGG + chr3_1:23615511-23615530 Msa0353500:intron 35.0%
GTCACAGAAGATATTCTTAC+TGG + chr3_1:23615546-23615565 Msa0353500:CDS 35.0%
AATATATAGACCTCCAACCA+CGG - chr3_1:23615587-23615606 None:intergenic 35.0%
AAACGATCGGAAAGATTGAT+AGG - chr3_1:23615645-23615664 None:intergenic 35.0%
! GTTATAGTGGAAGGTTAAAG+TGG + chr3_1:23615736-23615755 Msa0353500:CDS 35.0%
ACAATACATGAGAAGAGGAA+TGG - chr3_1:23615808-23615827 None:intergenic 35.0%
AAGGTACAATACATGAGAAG+AGG - chr3_1:23615813-23615832 None:intergenic 35.0%
AGGTCTAAATCAAGACTACA+AGG - chr3_1:23615922-23615941 None:intergenic 35.0%
!! AAGAATTAACATGACGGACA+AGG - chr3_1:23615942-23615961 None:intergenic 35.0%
! GGGACATCGAAAGAATTTTA+AGG - chr3_1:23616122-23616141 None:intergenic 35.0%
! ACAAAGGAAGTCTTTTATGG+AGG - chr3_1:23616377-23616396 None:intergenic 35.0%
! CCAACAAAGGAAGTCTTTTA+TGG - chr3_1:23616380-23616399 None:intergenic 35.0%
CCATAAAAGACTTCCTTTGT+TGG + chr3_1:23616377-23616396 Msa0353500:intron 35.0%
CAGTAGTGAAAGAAGCTTTA+GGG - chr3_1:23616487-23616506 None:intergenic 35.0%
TCAGTAGTGAAAGAAGCTTT+AGG - chr3_1:23616488-23616507 None:intergenic 35.0%
! AACAGCATTCTACCTTTTTC+TGG + chr3_1:23616638-23616657 Msa0353500:intron 35.0%
ATCTGCAAGTGAAATGAAAG+GGG - chr3_1:23616687-23616706 None:intergenic 35.0%
TTTCTTTCCATCTTTGCAAC+TGG + chr3_1:23616741-23616760 Msa0353500:CDS 35.0%
! GGTGGAGAAATGAACAATTT+TGG + chr3_1:23616805-23616824 Msa0353500:CDS 35.0%
!!! GAACAATTTTGGGTTATTGG+TGG + chr3_1:23616816-23616835 Msa0353500:CDS 35.0%
CAAGTACTTTGAGTAAACCT+TGG - chr3_1:23616869-23616888 None:intergenic 35.0%
!! ATCTTCATCTGAAGCTTTTG+AGG - chr3_1:23616919-23616938 None:intergenic 35.0%
TCAAAAGCTTCAGATGAAGA+TGG + chr3_1:23616918-23616937 Msa0353500:CDS 35.0%
ATAATGAGAAGAGTTGTTGG+TGG - chr3_1:23616990-23617009 None:intergenic 35.0%
ATCTCTTATGCTGTTAACAG+TGG + chr3_1:23617035-23617054 Msa0353500:CDS 35.0%
ATTCCACACATCTCAGATTT+GGG - chr3_1:23617260-23617279 None:intergenic 35.0%
CTGCTAGAGAAAATAAAAGC+TGG + chr3_1:23617283-23617302 Msa0353500:exon 35.0%
GAAAATAAAAGCTGGCAGAT+TGG + chr3_1:23617291-23617310 Msa0353500:three_prime_UTR 35.0%
ATACAATCACAACAGTTGAG+TGG - chr3_1:23617332-23617351 None:intergenic 35.0%
AGAAGAACCCAATTGAAGCA+AGG - chr3_1:23609178-23609197 None:intergenic 40.0%
GCTCTTCTCAGATGCTAATA+AGG - chr3_1:23609686-23609705 None:intergenic 40.0%
AGCTAAGTAGGAGACTATGA+TGG + chr3_1:23609703-23609722 Msa0353500:exon 40.0%
TGGTGCTTCTTGTGATACTT+AGG + chr3_1:23609858-23609877 Msa0353500:intron 40.0%
! TGTATCGAGTTTTGCACTGT+GGG - chr3_1:23610044-23610063 None:intergenic 40.0%
! TTGTATCGAGTTTTGCACTG+TGG - chr3_1:23610045-23610064 None:intergenic 40.0%
! GGATCTTTTATAGGCATGTG+AGG + chr3_1:23610112-23610131 Msa0353500:intron 40.0%
GGAATCGAATCAATCGATGA+AGG + chr3_1:23610194-23610213 Msa0353500:intron 40.0%
GTAATGGCACAGATCAGTAT+TGG - chr3_1:23610251-23610270 None:intergenic 40.0%
AATTCTTGGAGATCGTGAAG+AGG + chr3_1:23610665-23610684 Msa0353500:CDS 40.0%
! GTTCTGCGATCTTTTGCTTT+TGG - chr3_1:23610746-23610765 None:intergenic 40.0%
! GTGTATAGTTTGTGAGTGAG+GGG - chr3_1:23611112-23611131 None:intergenic 40.0%
GCTTGGAAAGAAAGAGTTGA+TGG + chr3_1:23611235-23611254 Msa0353500:CDS 40.0%
! GCTACTTCTGAAAGAGGAAT+AGG + chr3_1:23611310-23611329 Msa0353500:CDS 40.0%
! ATCGAAAAGCACATCAGTAC+TGG - chr3_1:23611347-23611366 None:intergenic 40.0%
CAAAAGAGCTAGTAGCAATG+AGG - chr3_1:23611437-23611456 None:intergenic 40.0%
!! CTCATTGCTACTAGCTCTTT+TGG + chr3_1:23611435-23611454 Msa0353500:intron 40.0%
ATAGAAACCTTCCTCGAAAG+TGG - chr3_1:23611669-23611688 None:intergenic 40.0%
ACCGTATGGTCATTATTCTG+CGG + chr3_1:23611712-23611731 Msa0353500:CDS 40.0%
GGTAGTGCAAGAAAATGACA+AGG - chr3_1:23611746-23611765 None:intergenic 40.0%
TGGGTACGGGATTTGTAATT+CGG - chr3_1:23611767-23611786 None:intergenic 40.0%
AACCACAACGCATAAGCATT+GGG - chr3_1:23611786-23611805 None:intergenic 40.0%
TAACCACAACGCATAAGCAT+TGG - chr3_1:23611787-23611806 None:intergenic 40.0%
TATTGGATCAGTTCCCCAAA+TGG + chr3_1:23611847-23611866 Msa0353500:CDS 40.0%
AGATATGTTTCACGGTTCAC+TGG - chr3_1:23611876-23611895 None:intergenic 40.0%
AGTGAACCGTGAAACATATC+TGG + chr3_1:23611875-23611894 Msa0353500:CDS 40.0%
ATCTGGACAGGCTTTCATTA+AGG + chr3_1:23611892-23611911 Msa0353500:CDS 40.0%
CAGTACTGTTGATCCGTTAA+AGG + chr3_1:23612371-23612390 Msa0353500:CDS 40.0%
!! AGTATTGGCTGTCACAATTG+GGG - chr3_1:23612400-23612419 None:intergenic 40.0%
!! CAGTATTGGCTGTCACAATT+GGG - chr3_1:23612401-23612420 None:intergenic 40.0%
!! ACAGTATTGGCTGTCACAAT+TGG - chr3_1:23612402-23612421 None:intergenic 40.0%
AACATGAGACCTTATCCACT+GGG - chr3_1:23612449-23612468 None:intergenic 40.0%
TAACATGAGACCTTATCCAC+TGG - chr3_1:23612450-23612469 None:intergenic 40.0%
CCTTGCAAATTCTGATGTCT+CGG - chr3_1:23612517-23612536 None:intergenic 40.0%
CAAAGATCGTAGAGCAATGA+AGG + chr3_1:23612644-23612663 Msa0353500:CDS 40.0%
AGATGCTAGTAAATGCCAAG+AGG - chr3_1:23612762-23612781 None:intergenic 40.0%
!! ATTTTTAGAGGGGTCAACCT+AGG + chr3_1:23613080-23613099 Msa0353500:intron 40.0%
AAATTCCTTTCGCTTTCTGC+AGG + chr3_1:23613283-23613302 Msa0353500:intron 40.0%
CGAGAAACATAGACTAAACG+TGG - chr3_1:23613356-23613375 None:intergenic 40.0%
TTGAACACGAATGGTTAGAC+AGG - chr3_1:23613776-23613795 None:intergenic 40.0%
GTATCAGCTGTGCTTACTAA+TGG + chr3_1:23613816-23613835 Msa0353500:CDS 40.0%
TAAACAACAGCAAAGCCTTG+AGG + chr3_1:23613874-23613893 Msa0353500:CDS 40.0%
AAACAACAGCAAAGCCTTGA+GGG + chr3_1:23613875-23613894 Msa0353500:CDS 40.0%
AAAACACATAGCTTCCCTCA+AGG - chr3_1:23613892-23613911 None:intergenic 40.0%
!! TTTATGATGGATCCCAACCT+TGG + chr3_1:23613909-23613928 Msa0353500:CDS 40.0%
GCTATGTTCAATTTCCACAG+AGG + chr3_1:23613943-23613962 Msa0353500:CDS 40.0%
CAATTTCCACAGAGGTTTGA+TGG + chr3_1:23613951-23613970 Msa0353500:CDS 40.0%
TCAATACCATCAAACCTCTG+TGG - chr3_1:23613960-23613979 None:intergenic 40.0%
CTGTACAAAAAGAGGCAAGA+TGG - chr3_1:23614431-23614450 None:intergenic 40.0%
ACAGATAAACTTGAGAGGGT+TGG + chr3_1:23614447-23614466 Msa0353500:intron 40.0%
ATAAACTTGAGAGGGTTGGA+TGG + chr3_1:23614451-23614470 Msa0353500:CDS 40.0%
ATTCAAGGTCCCGTTTATGT+GGG + chr3_1:23614475-23614494 Msa0353500:CDS 40.0%
ACATCCAGTACCCACATAAA+CGG - chr3_1:23614488-23614507 None:intergenic 40.0%
TATGCTTGGGTTTGATAGGA+GGG - chr3_1:23614543-23614562 None:intergenic 40.0%
TTATGCTTGGGTTTGATAGG+AGG - chr3_1:23614544-23614563 None:intergenic 40.0%
ACAGAGTTCAAATATCCTCG+GGG - chr3_1:23614844-23614863 None:intergenic 40.0%
GACAGAGTTCAAATATCCTC+GGG - chr3_1:23614845-23614864 None:intergenic 40.0%
GGACAGAGTTCAAATATCCT+CGG - chr3_1:23614846-23614865 None:intergenic 40.0%
TATTTGAACTCTGTCCCTTG+AGG + chr3_1:23614850-23614869 Msa0353500:intron 40.0%
GTTTGACCTAGTAACCTCAA+GGG - chr3_1:23614867-23614886 None:intergenic 40.0%
AGTTTGACCTAGTAACCTCA+AGG - chr3_1:23614868-23614887 None:intergenic 40.0%
ACCACTAAGCTTCCATCTAA+TGG + chr3_1:23614891-23614910 Msa0353500:intron 40.0%
TCCATTAGATGGAAGCTTAG+TGG - chr3_1:23614895-23614914 None:intergenic 40.0%
! AAGCTTCCATCTAATGGACA+AGG + chr3_1:23614897-23614916 Msa0353500:intron 40.0%
GAAAATGAGGACGGTTAACA+AGG - chr3_1:23615093-23615112 None:intergenic 40.0%
GCCTCTACACTTATGGAAAA+TGG + chr3_1:23615276-23615295 Msa0353500:CDS 40.0%
AACTCCAGAAACTCTTCTCA+AGG + chr3_1:23615317-23615336 Msa0353500:CDS 40.0%
TAAATCAGAATGGGGAACTG+AGG + chr3_1:23615374-23615393 Msa0353500:CDS 40.0%
ATATATAGACCTCCAACCAC+GGG - chr3_1:23615586-23615605 None:intergenic 40.0%
CCTTTAAATGCAGCAAGCTT+GGG - chr3_1:23615615-23615634 None:intergenic 40.0%
ACCTTTAAATGCAGCAAGCT+TGG - chr3_1:23615616-23615635 None:intergenic 40.0%
AAGCACTTGGTTCAAACGAT+CGG - chr3_1:23615658-23615677 None:intergenic 40.0%
TTTGAACCAAGTGCTTCGAT+GGG + chr3_1:23615662-23615681 Msa0353500:CDS 40.0%
GGAAGTGATTGGATAGATTG+TGG - chr3_1:23615787-23615806 None:intergenic 40.0%
AGAAGAGGAATGGAAGTGAT+TGG - chr3_1:23615798-23615817 None:intergenic 40.0%
GAGAAGAAATCACAAACCTG+TGG - chr3_1:23615873-23615892 None:intergenic 40.0%
GCATTACCTAACTCTGATTC+TGG + chr3_1:23615973-23615992 Msa0353500:intron 40.0%
TTACCTAACTCTGATTCTGG+AGG + chr3_1:23615976-23615995 Msa0353500:intron 40.0%
AATCCTCCAGAATCAGAGTT+AGG - chr3_1:23615982-23616001 None:intergenic 40.0%
ACCAATCGAGCTACATATGT+GGG + chr3_1:23616149-23616168 Msa0353500:intron 40.0%
TGTGGGACTTACAGTTACAA+AGG + chr3_1:23616166-23616185 Msa0353500:intron 40.0%
GTGGGACTTACAGTTACAAA+GGG + chr3_1:23616167-23616186 Msa0353500:intron 40.0%
TGGGACTTACAGTTACAAAG+GGG + chr3_1:23616168-23616187 Msa0353500:intron 40.0%
AATGGGGGAGAATACAATGT+AGG - chr3_1:23616459-23616478 None:intergenic 40.0%
!! AAGCTTTAGGGAGGAAAATG+GGG - chr3_1:23616475-23616494 None:intergenic 40.0%
!! GAAGCTTTAGGGAGGAAAAT+GGG - chr3_1:23616476-23616495 None:intergenic 40.0%
!! AGAAGCTTTAGGGAGGAAAA+TGG - chr3_1:23616477-23616496 None:intergenic 40.0%
!! TAGTGAAAGAAGCTTTAGGG+AGG - chr3_1:23616484-23616503 None:intergenic 40.0%
CACTACTGACATGAAACTTC+TGG + chr3_1:23616499-23616518 Msa0353500:intron 40.0%
AAGGATACCAGTTGCAAAGA+TGG - chr3_1:23616751-23616770 None:intergenic 40.0%
! GTGGTGTTGGAATTGATGAA+TGG + chr3_1:23616784-23616803 Msa0353500:CDS 40.0%
GTGTTGGAATTGATGAATGG+TGG + chr3_1:23616787-23616806 Msa0353500:CDS 40.0%
!! CATCTTTTTGCTGTGTTCCA+AGG + chr3_1:23616849-23616868 Msa0353500:CDS 40.0%
! GGTTTACTCAAAGTACTTGC+TGG + chr3_1:23616870-23616889 Msa0353500:CDS 40.0%
TTAACAGTGGCTACCAATCA+TGG + chr3_1:23617048-23617067 Msa0353500:CDS 40.0%
TAACAGTGGCTACCAATCAT+GGG + chr3_1:23617049-23617068 Msa0353500:CDS 40.0%
! CTTTAAGGAAGGGGTAAAGA+TGG - chr3_1:23617118-23617137 None:intergenic 40.0%
CATCTTTACCCCTTCCTTAA+AGG + chr3_1:23617116-23617135 Msa0353500:CDS 40.0%
! CCATAAGACCTTTAAGGAAG+GGG - chr3_1:23617127-23617146 None:intergenic 40.0%
! CCCATAAGACCTTTAAGGAA+GGG - chr3_1:23617128-23617147 None:intergenic 40.0%
! CCCTTCCTTAAAGGTCTTAT+GGG + chr3_1:23617125-23617144 Msa0353500:CDS 40.0%
! TCCCATAAGACCTTTAAGGA+AGG - chr3_1:23617129-23617148 None:intergenic 40.0%
CAGTGACTCTTGTCGTAAAA+GGG - chr3_1:23617235-23617254 None:intergenic 40.0%
GATTCCACACATCTCAGATT+TGG - chr3_1:23617261-23617280 None:intergenic 40.0%
! GATCTGAGTTGCTTCTGAAG+TGG + chr3_1:23609561-23609580 Msa0353500:intron 45.0%
GCATCTGAGAAGAGCTAAGT+AGG + chr3_1:23609691-23609710 Msa0353500:five_prime_UTR 45.0%
!! GAGACTATGATGGACTCAGA+AGG + chr3_1:23609713-23609732 Msa0353500:exon 45.0%
GATAAGCCGATGAAGACGTT+GGG + chr3_1:23609880-23609899 Msa0353500:CDS 45.0%
TTGCTACCCAACGTCTTCAT+CGG - chr3_1:23609889-23609908 None:intergenic 45.0%
AGCAAAGTCTGCCAGATTTG+TGG + chr3_1:23609904-23609923 Msa0353500:CDS 45.0%
GGTGATCCGTTTATTGCTTG+TGG + chr3_1:23609952-23609971 Msa0353500:CDS 45.0%
TCATAACACGGCCTACAAAC+CGG - chr3_1:23609991-23610010 None:intergenic 45.0%
GGCCGTGTTATGAGTATGAA+AGG + chr3_1:23609998-23610017 Msa0353500:CDS 45.0%
CAATCGATGAAGGACAGTGT+TGG + chr3_1:23610204-23610223 Msa0353500:intron 45.0%
!! GCACAGATCAGTATTGGTAG+CGG - chr3_1:23610245-23610264 None:intergenic 45.0%
TCTATGACTTAGGAGACTGC+TGG + chr3_1:23610374-23610393 Msa0353500:intron 45.0%
TCAGGTAGTCCTGCAATTCT+TGG + chr3_1:23610651-23610670 Msa0353500:intron 45.0%
TCACGATCTCCAAGAATTGC+AGG - chr3_1:23610663-23610682 None:intergenic 45.0%
!! ACGCATGTTGAGTTGGCAAA+TGG + chr3_1:23610764-23610783 Msa0353500:CDS 45.0%
!! TTGAGTTGGCAAATGGCGTA+TGG + chr3_1:23610771-23610790 Msa0353500:CDS 45.0%
! TGAGTTGGCAAATGGCGTAT+GGG + chr3_1:23610772-23610791 Msa0353500:CDS 45.0%
AATCACATTCCTCGGCTAAC+CGG + chr3_1:23610843-23610862 Msa0353500:CDS 45.0%
TTGAACAACCTCTTGTCCAC+CGG - chr3_1:23610865-23610884 None:intergenic 45.0%
TTCCCTATGCAGCAAACATC+AGG + chr3_1:23611185-23611204 Msa0353500:intron 45.0%
TCCCTATGCAGCAAACATCA+GGG + chr3_1:23611186-23611205 Msa0353500:intron 45.0%
! ACCCTGATGTTTGCTGCATA+GGG - chr3_1:23611190-23611209 None:intergenic 45.0%
! AACCCTGATGTTTGCTGCAT+AGG - chr3_1:23611191-23611210 None:intergenic 45.0%
CAAGCTACATTACCCAATCC+TGG - chr3_1:23611220-23611239 None:intergenic 45.0%
CAGGATTGGGTAATGTAGCT+TGG + chr3_1:23611218-23611237 Msa0353500:CDS 45.0%
!! GGAAAGAAAGAGTTGATGGC+TGG + chr3_1:23611239-23611258 Msa0353500:CDS 45.0%
AATACTGCTCCAATGAGCAC+AGG + chr3_1:23611283-23611302 Msa0353500:CDS 45.0%
! GGTCAAGCTACTTCTGAAAG+AGG + chr3_1:23611304-23611323 Msa0353500:CDS 45.0%
GCCGCAGAATAATGACCATA+CGG - chr3_1:23611716-23611735 None:intergenic 45.0%
!! AACGCATAAGCATTGGGTAC+GGG - chr3_1:23611780-23611799 None:intergenic 45.0%
!! CAACGCATAAGCATTGGGTA+CGG - chr3_1:23611781-23611800 None:intergenic 45.0%
TACCCAATGCTTATGCGTTG+TGG + chr3_1:23611781-23611800 Msa0353500:CDS 45.0%
ACCGTGAAACATATCTGGAC+AGG + chr3_1:23611880-23611899 Msa0353500:CDS 45.0%
GCCTGTCCAGATATGTTTCA+CGG - chr3_1:23611884-23611903 None:intergenic 45.0%
AGTTGCAGATATGATCGGGA+AGG + chr3_1:23612312-23612331 Msa0353500:intron 45.0%
GTTGCAGATATGATCGGGAA+GGG + chr3_1:23612313-23612332 Msa0353500:intron 45.0%
TTGCAGATATGATCGGGAAG+GGG + chr3_1:23612314-23612333 Msa0353500:intron 45.0%
ACAATTGGGGGCTCCTTTAA+CGG - chr3_1:23612387-23612406 None:intergenic 45.0%
!! GTATTGGCTGTCACAATTGG+GGG - chr3_1:23612399-23612418 None:intergenic 45.0%
TGGGTAGTCAACAGCAAGAA+TGG - chr3_1:23612430-23612449 None:intergenic 45.0%
! TGTTGACTACCCAGTGGATA+AGG + chr3_1:23612437-23612456 Msa0353500:CDS 45.0%
CCGAGACATCAGAATTTGCA+AGG + chr3_1:23612514-23612533 Msa0353500:CDS 45.0%
CTAGTAAATGCCAAGAGGCA+TGG - chr3_1:23612757-23612776 None:intergenic 45.0%
TGAAAGTCCCTGAAGAAGGA+TGG + chr3_1:23612863-23612882 Msa0353500:CDS 45.0%
GAAAGTCCCTGAAGAAGGAT+GGG + chr3_1:23612864-23612883 Msa0353500:CDS 45.0%
TGATGCAAGATGGTACACCT+TGG + chr3_1:23612887-23612906 Msa0353500:CDS 45.0%
TGAACTACCTGGATCATTCC+TGG - chr3_1:23612937-23612956 None:intergenic 45.0%
GAAAACCTGCAGAAAGCGAA+AGG - chr3_1:23613291-23613310 None:intergenic 45.0%
! TCGCTTTCTGCAGGTTTTCT+TGG + chr3_1:23613292-23613311 Msa0353500:intron 45.0%
! CGCTTTCTGCAGGTTTTCTT+GGG + chr3_1:23613293-23613312 Msa0353500:intron 45.0%
CAGTATCAAGTCCTCCACTT+TGG - chr3_1:23613319-23613338 None:intergenic 45.0%
AGTGGAGGACTTGATACTGA+TGG + chr3_1:23613320-23613339 Msa0353500:CDS 45.0%
!! TTTCTCGTGAAAAGCGTCCA+GGG + chr3_1:23613369-23613388 Msa0353500:CDS 45.0%
TTCTTGTGATGTTGGAACCC+TGG - chr3_1:23613389-23613408 None:intergenic 45.0%
AGGGTTCCAACATCACAAGA+AGG + chr3_1:23613388-23613407 Msa0353500:CDS 45.0%
TTCCAACATCACAAGAAGGC+CGG + chr3_1:23613392-23613411 Msa0353500:CDS 45.0%
TACACCTCCCAGTATCACTT+CGG + chr3_1:23614240-23614259 Msa0353500:intron 45.0%
CGTACATCCGAAGTGATACT+GGG - chr3_1:23614250-23614269 None:intergenic 45.0%
TCACTTCGGATGTACGCATT+TGG + chr3_1:23614254-23614273 Msa0353500:intron 45.0%
! GCTATCAGGAAGTACACTTC+TGG + chr3_1:23614293-23614312 Msa0353500:intron 45.0%
CATTCAAGGTCCCGTTTATG+TGG + chr3_1:23614474-23614493 Msa0353500:CDS 45.0%
CATCCAGTACCCACATAAAC+GGG - chr3_1:23614487-23614506 None:intergenic 45.0%
! CTTGTTTCTTCACTTTGCGG+TGG + chr3_1:23614574-23614593 Msa0353500:CDS 45.0%
AGAGGATATAGAAGAAGGGG+TGG + chr3_1:23614690-23614709 Msa0353500:CDS 45.0%
GATATAGAAGAAGGGGTGGA+AGG + chr3_1:23614694-23614713 Msa0353500:CDS 45.0%
AGAGTTCAAATATCCTCGGG+GGG - chr3_1:23614842-23614861 None:intergenic 45.0%
CAGAGTTCAAATATCCTCGG+GGG - chr3_1:23614843-23614862 None:intergenic 45.0%
CTCAAATGAGCCTTGAGAGA+AGG + chr3_1:23615229-23615248 Msa0353500:CDS 45.0%
ATGAGCCTTGAGAGAAGGTT+TGG + chr3_1:23615234-23615253 Msa0353500:CDS 45.0%
ACTGACCAAACCTTCTCTCA+AGG - chr3_1:23615242-23615261 None:intergenic 45.0%
TCCAGAAACTCTTCTCAAGG+AGG + chr3_1:23615320-23615339 Msa0353500:CDS 45.0%
CCATAGATCCATCCAATCTG+TGG - chr3_1:23615522-23615541 None:intergenic 45.0%
CCACAGATTGGATGGATCTA+TGG + chr3_1:23615519-23615538 Msa0353500:intron 45.0%
!! CCCAAGCTTGCTGCATTTAA+AGG + chr3_1:23615612-23615631 Msa0353500:CDS 45.0%
GTTTGAACCAAGTGCTTCGA+TGG + chr3_1:23615661-23615680 Msa0353500:CDS 45.0%
TAAGTCGACATTGTCCCATC+TGG + chr3_1:23615709-23615728 Msa0353500:CDS 45.0%
CCACTATAACCGTACCAGAT+GGG - chr3_1:23615726-23615745 None:intergenic 45.0%
TCCACTATAACCGTACCAGA+TGG - chr3_1:23615727-23615746 None:intergenic 45.0%
! TCTGGTACGGTTATAGTGGA+AGG + chr3_1:23615727-23615746 Msa0353500:CDS 45.0%
GAAGGTTAAAGTGGCTTGAG+AGG + chr3_1:23615745-23615764 Msa0353500:CDS 45.0%
CTTGTTAGTCAGGAGACAGA+CGG - chr3_1:23615841-23615860 None:intergenic 45.0%
TAGCTCGATTGGTGAGCTAA+GGG - chr3_1:23616142-23616161 None:intergenic 45.0%
CACCAATCGAGCTACATATG+TGG + chr3_1:23616148-23616167 Msa0353500:intron 45.0%
TCCCACATATGTAGCTCGAT+TGG - chr3_1:23616153-23616172 None:intergenic 45.0%
!! AGCTTTAGGGAGGAAAATGG+GGG - chr3_1:23616474-23616493 None:intergenic 45.0%
CAACTGGTATCCTTGAGATG+AGG + chr3_1:23616757-23616776 Msa0353500:CDS 45.0%
AACAGTGGCTACCAATCATG+GGG + chr3_1:23617050-23617069 Msa0353500:CDS 45.0%
CCCCTTCCTTAAAGGTCTTA+TGG + chr3_1:23617124-23617143 Msa0353500:CDS 45.0%
AATGGACCAAACAACCACGA+TGG - chr3_1:23617171-23617190 None:intergenic 45.0%
CCAGTGACTCTTGTCGTAAA+AGG - chr3_1:23617236-23617255 None:intergenic 45.0%
! CCTTTTACGACAAGAGTCAC+TGG + chr3_1:23617233-23617252 Msa0353500:CDS 45.0%
!! GAAATAAAAATAAAATTAAA+CGG - chr3_1:23613469-23613488 None:intergenic 5.0%
ATGGACTCAGAAGGAGAAGC+TGG + chr3_1:23609722-23609741 Msa0353500:CDS 50.0%
TGGACTCAGAAGGAGAAGCT+GGG + chr3_1:23609723-23609742 Msa0353500:CDS 50.0%
GGATAAGCCGATGAAGACGT+TGG + chr3_1:23609879-23609898 Msa0353500:intron 50.0%
TTGTGGTGTTTGTGCCTTCC+CGG + chr3_1:23609969-23609988 Msa0353500:CDS 50.0%
! TTTGTGCCTTCCCGGTTTGT+AGG + chr3_1:23609977-23609996 Msa0353500:CDS 50.0%
CATAACACGGCCTACAAACC+GGG - chr3_1:23609990-23610009 None:intergenic 50.0%
!! CGATGAAGGACAGTGTTGGT+AGG + chr3_1:23610208-23610227 Msa0353500:intron 50.0%
CTTGGAGATCGTGAAGAGGA+TGG + chr3_1:23610669-23610688 Msa0353500:CDS 50.0%
TCGCAGAACGCATGTTGAGT+TGG + chr3_1:23610757-23610776 Msa0353500:CDS 50.0%
CATTGACATCCTCTCAGGTG+AGG - chr3_1:23611010-23611029 None:intergenic 50.0%
CTCACCTGAGAGGATGTCAA+TGG + chr3_1:23611008-23611027 Msa0353500:CDS 50.0%
GATGCCATTGACATCCTCTC+AGG - chr3_1:23611015-23611034 None:intergenic 50.0%
GCATCTCCTGTAAATGCTCG+CGG + chr3_1:23611030-23611049 Msa0353500:CDS 50.0%
CATCTCCTGTAAATGCTCGC+GGG + chr3_1:23611031-23611050 Msa0353500:CDS 50.0%
AACATCAGGGTTGCTGAACC+AGG + chr3_1:23611199-23611218 Msa0353500:CDS 50.0%
AGGGTTGCTGAACCAGGATT+GGG + chr3_1:23611205-23611224 Msa0353500:CDS 50.0%
GTAGCTTGACCTGTGCTCAT+TGG - chr3_1:23611295-23611314 None:intergenic 50.0%
AAGCTCGACAACCACTTTCG+AGG + chr3_1:23611655-23611674 Msa0353500:CDS 50.0%
TCGACAACCACTTTCGAGGA+AGG + chr3_1:23611659-23611678 Msa0353500:CDS 50.0%
GGTTCACTGGAAGCCATTTG+GGG - chr3_1:23611863-23611882 None:intergenic 50.0%
CGGTTCACTGGAAGCCATTT+GGG - chr3_1:23611864-23611883 None:intergenic 50.0%
ACGGTTCACTGGAAGCCATT+TGG - chr3_1:23611865-23611884 None:intergenic 50.0%
ACTTCTCCACAAGCACTTGC+AGG + chr3_1:23612063-23612082 Msa0353500:intron 50.0%
TCCACAAGCACTTGCAGGAA+AGG + chr3_1:23612068-23612087 Msa0353500:intron 50.0%
TCCTTTCCTGCAAGTGCTTG+TGG - chr3_1:23612072-23612091 None:intergenic 50.0%
TCAACGGCTGCTAACTGTGA+AGG - chr3_1:23612342-23612361 None:intergenic 50.0%
!! TCTTGCTGTTGACTACCCAG+TGG + chr3_1:23612431-23612450 Msa0353500:CDS 50.0%
ACACCATAAGCCATGCCTCT+TGG + chr3_1:23612744-23612763 Msa0353500:intron 50.0%
! ATGCCAAGAGGCATGGCTTA+TGG - chr3_1:23612750-23612769 None:intergenic 50.0%
GCAGTGAAAGTCCCTGAAGA+AGG + chr3_1:23612859-23612878 Msa0353500:CDS 50.0%
GCATCACCCATCCTTCTTCA+GGG - chr3_1:23612873-23612892 None:intergenic 50.0%
TGCATCACCCATCCTTCTTC+AGG - chr3_1:23612874-23612893 None:intergenic 50.0%
GAAGGATGGGTGATGCAAGA+TGG + chr3_1:23612877-23612896 Msa0353500:CDS 50.0%
!! TGGTCTCTGGTGTTGTTTCC+AGG - chr3_1:23612913-23612932 None:intergenic 50.0%
AACAACACCAGAGACCATCC+AGG + chr3_1:23612916-23612935 Msa0353500:CDS 50.0%
GATCATTCCTGGATGGTCTC+TGG - chr3_1:23612926-23612945 None:intergenic 50.0%
AGACCATCCAGGAATGATCC+AGG + chr3_1:23612927-23612946 Msa0353500:CDS 50.0%
CTACCTGGATCATTCCTGGA+TGG - chr3_1:23612933-23612952 None:intergenic 50.0%
! CAGGTTTTCTTGGGCCAAAG+TGG + chr3_1:23613302-23613321 Msa0353500:intron 50.0%
! GTTTTCTTGGGCCAAAGTGG+AGG + chr3_1:23613305-23613324 Msa0353500:CDS 50.0%
!! GTTTCTCGTGAAAAGCGTCC+AGG + chr3_1:23613368-23613387 Msa0353500:CDS 50.0%
CACAAGTGCATTCATGGCAC+CGG - chr3_1:23613414-23613433 None:intergenic 50.0%
GCCATGAATGCACTTGTGAG+TGG + chr3_1:23613416-23613435 Msa0353500:intron 50.0%
GCCACTCACAAGTGCATTCA+TGG - chr3_1:23613420-23613439 None:intergenic 50.0%
AAGGAGATGGAAGACCCATG+TGG - chr3_1:23613670-23613689 None:intergenic 50.0%
AGCCCTTTGGGCTTAAAGCA+TGG + chr3_1:23614205-23614224 Msa0353500:intron 50.0%
GCCCTTTGGGCTTAAAGCAT+GGG + chr3_1:23614206-23614225 Msa0353500:intron 50.0%
! CCCCATGCTTTAAGCCCAAA+GGG - chr3_1:23614210-23614229 None:intergenic 50.0%
CCCTTTGGGCTTAAAGCATG+GGG + chr3_1:23614207-23614226 Msa0353500:intron 50.0%
! TCCCCATGCTTTAAGCCCAA+AGG - chr3_1:23614211-23614230 None:intergenic 50.0%
TTTGGGCTTAAAGCATGGGG+AGG + chr3_1:23614210-23614229 Msa0353500:intron 50.0%
ACATCCGAAGTGATACTGGG+AGG - chr3_1:23614247-23614266 None:intergenic 50.0%
GCGTACATCCGAAGTGATAC+TGG - chr3_1:23614251-23614270 None:intergenic 50.0%
AGAGGGTTGGATGGCATTCA+AGG + chr3_1:23614460-23614479 Msa0353500:CDS 50.0%
AGACTAAAGACGGGCACAGT+TGG - chr3_1:23614670-23614689 None:intergenic 50.0%
TGTGCCCGTCTTTAGTCTAG+AGG + chr3_1:23614672-23614691 Msa0353500:CDS 50.0%
GAGTTCAAATATCCTCGGGG+GGG - chr3_1:23614841-23614860 None:intergenic 50.0%
CTCTGTCCCTTGAGGTTACT+AGG + chr3_1:23614858-23614877 Msa0353500:intron 50.0%
!! GTTTCTGGAGTTGCAGACTG+AGG - chr3_1:23615309-23615328 None:intergenic 50.0%
GCCTCCTTGAGAAGAGTTTC+TGG - chr3_1:23615324-23615343 None:intergenic 50.0%
! CTAAAGCCCATCGAAGCACT+TGG - chr3_1:23615671-23615690 None:intergenic 50.0%
! CAAGTGCTTCGATGGGCTTT+AGG + chr3_1:23615669-23615688 Msa0353500:CDS 50.0%
!! TCGATGGGCTTTAGGTTCAG+TGG + chr3_1:23615677-23615696 Msa0353500:CDS 50.0%
CGACATTGTCCCATCTGGTA+CGG + chr3_1:23615714-23615733 Msa0353500:CDS 50.0%
CCCATCTGGTACGGTTATAG+TGG + chr3_1:23615723-23615742 Msa0353500:CDS 50.0%
GTAGCTCGATTGGTGAGCTA+AGG - chr3_1:23616143-23616162 None:intergenic 50.0%
CTGGTATCCTTGAGATGAGG+TGG + chr3_1:23616760-23616779 Msa0353500:CDS 50.0%
ATCCTTGAGATGAGGTGGAG+TGG + chr3_1:23616765-23616784 Msa0353500:CDS 50.0%
AACCTTGTCGGAGTTGTTGC+AGG + chr3_1:23617011-23617030 Msa0353500:CDS 50.0%
TTCCTGCAACAACTCCGACA+AGG - chr3_1:23617016-23617035 None:intergenic 50.0%
CAAAGAGTGGTCCCCATGAT+TGG - chr3_1:23617064-23617083 None:intergenic 50.0%
CAATCATGGGGACCACTCTT+TGG + chr3_1:23617062-23617081 Msa0353500:CDS 50.0%
GGCGTCCCATAAGACCTTTA+AGG - chr3_1:23617133-23617152 None:intergenic 50.0%
GACCAAACAACCACGATGGT+TGG - chr3_1:23617167-23617186 None:intergenic 50.0%
! GGTCCCAAATCTGAGATGTG+TGG + chr3_1:23617254-23617273 Msa0353500:CDS 50.0%
GGACTCAGAAGGAGAAGCTG+GGG + chr3_1:23609724-23609743 Msa0353500:CDS 55.0%
!! GGACAGTGTTGGTAGGTGCA+TGG + chr3_1:23610215-23610234 Msa0353500:intron 55.0%
GGAGATCGTGAAGAGGATGG+TGG + chr3_1:23610672-23610691 Msa0353500:CDS 55.0%
TATCTGCAGCCTCACCTGAG+AGG + chr3_1:23610998-23611017 Msa0353500:CDS 55.0%
CGTTTCCCGCGAGCATTTAC+AGG - chr3_1:23611039-23611058 None:intergenic 55.0%
CAGGGTTGCTGAACCAGGAT+TGG + chr3_1:23611204-23611223 Msa0353500:CDS 55.0%
TTGAACCACGAGCACCTGAG+TGG + chr3_1:23612568-23612587 Msa0353500:CDS 55.0%
AAGTACCACTCAGGTGCTCG+TGG - chr3_1:23612576-23612595 None:intergenic 55.0%
CAAGATGGTACACCTTGGCC+TGG + chr3_1:23612892-23612911 Msa0353500:CDS 55.0%
!! CTGGTGTTGTTTCCAGGCCA+AGG - chr3_1:23612907-23612926 None:intergenic 55.0%
CACCGGCCTTCTTGTGATGT+TGG - chr3_1:23613397-23613416 None:intergenic 55.0%
CCAAAGGGCTCTTGCATGAG+GGG - chr3_1:23614195-23614214 None:intergenic 55.0%
CCCAAAGGGCTCTTGCATGA+GGG - chr3_1:23614196-23614215 None:intergenic 55.0%
CCCTCATGCAAGAGCCCTTT+GGG + chr3_1:23614193-23614212 Msa0353500:intron 55.0%
GGTCCCGTTTATGTGGGTAC+TGG + chr3_1:23614481-23614500 Msa0353500:CDS 55.0%
CGGGGGGGAGAATCGTAAAA+TGG - chr3_1:23614826-23614845 None:intergenic 55.0%
! TTTTACGATTCTCCCCCCCG+AGG + chr3_1:23614826-23614845 Msa0353500:intron 55.0%
! GGATTTAAGATGCACGCCCG+TGG + chr3_1:23615567-23615586 Msa0353500:CDS 55.0%
TTAAGATGCACGCCCGTGGT+TGG + chr3_1:23615571-23615590 Msa0353500:CDS 55.0%
TTAGTCAGGAGACAGACGGC+AGG - chr3_1:23615837-23615856 None:intergenic 55.0%
CACCACTCCACCTCATCTCA+AGG - chr3_1:23616770-23616789 None:intergenic 55.0%
GAGATGAGGTGGAGTGGTGT+TGG + chr3_1:23616771-23616790 Msa0353500:CDS 55.0%
CAACCACGATGGTTGGCGTT+CGG - chr3_1:23617160-23617179 None:intergenic 55.0%
CGCCAACCATCGTGGTTGTT+TGG + chr3_1:23617162-23617181 Msa0353500:CDS 55.0%
ACACGGCCTACAAACCGGGA+AGG - chr3_1:23609986-23610005 None:intergenic 60.0%
TGGCAAATGGCGTATGGGCG+AGG + chr3_1:23610777-23610796 Msa0353500:CDS 60.0%
AATGGCGTATGGGCGAGGTG+AGG + chr3_1:23610782-23610801 Msa0353500:CDS 60.0%
CACATTCCTCGGCTAACCGG+TGG + chr3_1:23610846-23610865 Msa0353500:CDS 60.0%
! TCTTGTCCACCGGTTAGCCG+AGG - chr3_1:23610855-23610874 None:intergenic 60.0%
TCGGCTAACCGGTGGACAAG+AGG + chr3_1:23610854-23610873 Msa0353500:CDS 60.0%
CCCCTCATGCAAGAGCCCTT+TGG + chr3_1:23614192-23614211 Msa0353500:intron 60.0%
GCCCAAAGGGCTCTTGCATG+AGG - chr3_1:23614197-23614216 None:intergenic 60.0%
CAGGAGACAGACGGCAGGTA+AGG - chr3_1:23615832-23615851 None:intergenic 60.0%
CGATGGTTGGCGTTCGGTTC+TGG - chr3_1:23617154-23617173 None:intergenic 60.0%
GAACCGAACGCCAACCATCG+TGG + chr3_1:23617154-23617173 Msa0353500:CDS 60.0%
AGATGCACGCCCGTGGTTGG+AGG + chr3_1:23615574-23615593 Msa0353500:CDS 65.0%
GGCGTATGGGCGAGGTGAGG+AGG + chr3_1:23610785-23610804 Msa0353500:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 23608902 23617632 23608902 ID=Msa0353500;Name=Msa0353500
chr3_1 mRNA 23608902 23617632 23608902 ID=Msa0353500-mRNA-1;Parent=Msa0353500;Name=Msa0353500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=480|1|1|1|0.92|0.86|15|343|1078
chr3_1 exon 23608902 23609224 23608902 ID=Msa0353500-mRNA-1:exon:5251;Parent=Msa0353500-mRNA-1
chr3_1 exon 23609562 23609745 23609562 ID=Msa0353500-mRNA-1:exon:5252;Parent=Msa0353500-mRNA-1
chr3_1 exon 23609880 23610075 23609880 ID=Msa0353500-mRNA-1:exon:5253;Parent=Msa0353500-mRNA-1
chr3_1 exon 23610655 23610875 23610655 ID=Msa0353500-mRNA-1:exon:5254;Parent=Msa0353500-mRNA-1
chr3_1 exon 23610985 23611102 23610985 ID=Msa0353500-mRNA-1:exon:5255;Parent=Msa0353500-mRNA-1
chr3_1 exon 23611197 23611377 23611197 ID=Msa0353500-mRNA-1:exon:5256;Parent=Msa0353500-mRNA-1
chr3_1 exon 23611647 23611913 23611647 ID=Msa0353500-mRNA-1:exon:5257;Parent=Msa0353500-mRNA-1
chr3_1 exon 23612320 23612665 23612320 ID=Msa0353500-mRNA-1:exon:5258;Parent=Msa0353500-mRNA-1
chr3_1 exon 23612811 23612948 23612811 ID=Msa0353500-mRNA-1:exon:5259;Parent=Msa0353500-mRNA-1
chr3_1 exon 23613305 23613430 23613305 ID=Msa0353500-mRNA-1:exon:5260;Parent=Msa0353500-mRNA-1
chr3_1 exon 23613810 23614022 23613810 ID=Msa0353500-mRNA-1:exon:5261;Parent=Msa0353500-mRNA-1
chr3_1 exon 23614451 23614715 23614451 ID=Msa0353500-mRNA-1:exon:5262;Parent=Msa0353500-mRNA-1
chr3_1 exon 23615193 23615395 23615193 ID=Msa0353500-mRNA-1:exon:5263;Parent=Msa0353500-mRNA-1
chr3_1 exon 23615525 23615875 23615525 ID=Msa0353500-mRNA-1:exon:5264;Parent=Msa0353500-mRNA-1
chr3_1 exon 23616705 23617632 23616705 ID=Msa0353500-mRNA-1:exon:5265;Parent=Msa0353500-mRNA-1
chr3_1 five_prime_UTR 23608902 23609224 23608902 ID=Msa0353500-mRNA-1:five_prime_utr;Parent=Msa0353500-mRNA-1
chr3_1 five_prime_UTR 23609562 23609718 23609562 ID=Msa0353500-mRNA-1:five_prime_utr;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23609719 23609745 23609719 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23609880 23610075 23609880 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23610655 23610875 23610655 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23610985 23611102 23610985 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23611197 23611377 23611197 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23611647 23611913 23611647 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23612320 23612665 23612320 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23612811 23612948 23612811 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23613305 23613430 23613305 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23613810 23614022 23613810 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23614451 23614715 23614451 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23615193 23615395 23615193 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23615525 23615875 23615525 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 CDS 23616705 23617289 23616705 ID=Msa0353500-mRNA-1:cds;Parent=Msa0353500-mRNA-1
chr3_1 three_prime_UTR 23617290 23617632 23617290 ID=Msa0353500-mRNA-1:three_prime_utr;Parent=Msa0353500-mRNA-1
Gene Sequence

>Msa0353500

ATGATGGACTCAGAAGGAGAAGCTGGGGATAAGCCGATGAAGACGTTGGGTAGCAAAGTCTGCCAGATTTGTGGTGATAATATCGGTAGTGCTGTTAATGGTGATCCGTTTATTGCTTGTGGTGTTTGTGCCTTCCCGGTTTGTAGGCCGTGTTATGAGTATGAAAGGAAAGATGGGAATCAGTCTTGCCCACAGTGCAAAACTCGATACAATAAGCACAAAGGTAGTCCTGCAATTCTTGGAGATCGTGAAGAGGATGGTGGTGCTGATAATGATGCCAATGACTTCAAGTACAATTCAGAAACTCAGACCCAAAAGCAAAAGATCGCAGAACGCATGTTGAGTTGGCAAATGGCGTATGGGCGAGGTGAGGAGGTTGATGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCGGCTAACCGGTGGACAAGAGACATCTGGAGAATTATCTGCAGCCTCACCTGAGAGGATGTCAATGGCATCTCCTGTAAATGCTCGCGGGAAACGAGTTCATAATCATCCATCATATTCGTCTGATCTTAATCAATCACCAAACATCAGGGTTGCTGAACCAGGATTGGGTAATGTAGCTTGGAAAGAAAGAGTTGATGGCTGGAAAATGAAGCACGATAATAAGAATACTGCTCCAATGAGCACAGGTCAAGCTACTTCTGAAAGAGGAATAGGAGATATTGATGCCAGTACTGATGTGCTTTTCGATGATTCCTTGTTGAATGATGAAGCTCGACAACCACTTTCGAGGAAGGTTTCTATTCCATCTTCTAGGATAAATCCATACCGTATGGTCATTATTCTGCGGCTTGTTATCCTTGTCATTTTCTTGCACTACCGAATTACAAATCCCGTACCCAATGCTTATGCGTTGTGGTTAATATCAGTTATATGTGAAGTTTGGTTTGCCTTTTCTTGGATATTGGATCAGTTCCCCAAATGGCTTCCAGTGAACCGTGAAACATATCTGGACAGGCTTTCATTAAGATATGATCGGGAAGGGGAACCTTCACAGTTAGCAGCCGTTGACATTTTCGTCAGTACTGTTGATCCGTTAAAGGAGCCCCCAATTGTGACAGCCAATACTGTACTATCCATTCTTGCTGTTGACTACCCAGTGGATAAGGTCTCATGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAATATGAAATTGAACCACGAGCACCTGAGTGGTACTTTTCAAAGAAAATTGACTACTTGAAAGATAAGGTCCAAGCATCATTTGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAATTCAAAATTCGTATCAATGGACTTGTTGCAAAAGCAGTGAAAGTCCCTGAAGAAGGATGGGTGATGCAAGATGGTACACCTTGGCCTGGAAACAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGATACTGATGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAGGCCGGTGCCATGAATGCACTTGTTCGTGTATCAGCTGTGCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCATTACATAAACAACAGCAAAGCCTTGAGGGAAGCTATGTGTTTTATGATGGATCCCAACCTTGGAAAAAATGTTTGCTATGTTCAATTTCCACAGAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGGTTGGATGGCATTCAAGGTCCCGTTTATGTGGGTACTGGATGTGTCTTCAATAGAACTGCTTTATATGGTTATGACCCTCCTATCAAACCCAAGCATAAAAAGCCTAGTCTTGTTTCTTCACTTTGCGGTGGAGATCGAAACAAGAGCTCAAAATCTAGCAAGAAAGACTCAAAAAAGAATAAATCTAGCAAGCATGTTGATCCAACTGTGCCCGTCTTTAGTCTAGAGGATATAGAAGAAGGGGTGGAAGGTGCTGGATTTGATGATGAAAAATCACTACTCATGTCTCAAATGAGCCTTGAGAGAAGGTTTGGTCAGTCTGCTGTTTTTGTTGCCTCTACACTTATGGAAAATGGTGGCGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTCAAGGAGGCAATTCATGTTATCAGTTGTGGTTATGAAGATAAATCAGAATGGGGAACTGAGATTGGATGGATCTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCACGCCCGTGGTTGGAGGTCTATATATTGCATGCCCAAGCTTGCTGCATTTAAAGGTTCAGCTCCTATCAATCTTTCCGATCGTTTGAACCAAGTGCTTCGATGGGCTTTAGGTTCAGTGGAAATTCTACTAAGTCGACATTGTCCCATCTGGTACGGTTATAGTGGAAGGTTAAAGTGGCTTGAGAGGTTTGCGTATATAAACACCACAATCTATCCAATCACTTCCATTCCTCTTCTCATGTATTGTACCTTACCTGCCGTCTGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTCATATCTCTCTTTCTTTCCATCTTTGCAACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCAGCTCATCTTTTTGCTGTGTTCCAAGGTTTACTCAAAGTACTTGCTGGAATTGACACAAACTTCACTGTTACCTCAAAAGCTTCAGATGAAGATGGAGACTCCGCAGAACTATACATGTTTAAATGGACAACACTTCTCATTCCACCAACAACTCTTCTCATTATAAACCTTGTCGGAGTTGTTGCAGGAATCTCTTATGCTGTTAACAGTGGCTACCAATCATGGGGACCACTCTTTGGTAAACTTTTCTTTGCATTTTGGGTGATCATCCATCTTTACCCCTTCCTTAAAGGTCTTATGGGACGCCAGAACCGAACGCCAACCATCGTGGTTGTTTGGTCCATTCTTCTTGCATCCATTTTTTCACTTTTATGGGTTCGAATCGACCCTTTTACGACAAGAGTCACTGGTCCCAAATCTGAGATGTGTGGAATCAACTGCTAG
Protein sequence

>Msa0353500

MMDSEGEAGDKPMKTLGSKVCQICGDNIGSAVNGDPFIACGVCAFPVCRPCYEYERKDGNQSCPQCKTRYNKHKGSPAILGDREEDGGADNDANDFKYNSETQTQKQKIAERMLSWQMAYGRGEEVDAPNYDKEVSHNHIPRLTGGQETSGELSAASPERMSMASPVNARGKRVHNHPSYSSDLNQSPNIRVAEPGLGNVAWKERVDGWKMKHDNKNTAPMSTGQATSERGIGDIDASTDVLFDDSLLNDEARQPLSRKVSIPSSRINPYRMVIILRLVILVIFLHYRITNPVPNAYALWLISVICEVWFAFSWILDQFPKWLPVNRETYLDRLSLRYDREGEPSQLAAVDIFVSTVDPLKEPPIVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYEIEPRAPEWYFSKKIDYLKDKVQASFVKDRRAMKREYEEFKIRINGLVAKAVKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYDPPIKPKHKKPSLVSSLCGGDRNKSSKSSKKDSKKNKSSKHVDPTVPVFSLEDIEEGVEGAGFDDEKSLLMSQMSLERRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYINTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEMCGINC*