Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0292790 | XP_013464426.1 | 94.195 | 758 | 40 | 1 | 21 | 774 | 1 | 758 | 0.0 | 1414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0292790 | sp|Q93XX4|C2D61_ARATH | 64.937 | 636 | 198 | 10 | 26 | 652 | 2 | 621 | 0.0 | 836 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0292790 | A0A072VA30 | 94.195 | 758 | 40 | 1 | 21 | 774 | 1 | 758 | 0.0 | 1414 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0071480 | Msa0292790 | 0.821571 | 3.760883e-53 | -8.615850e-47 |
Msa0089850 | Msa0292790 | 0.867820 | 1.032280e-65 | -8.615850e-47 |
Msa0136280 | Msa0292790 | 0.863479 | 2.418196e-64 | -8.615850e-47 |
Msa0179100 | Msa0292790 | 0.817898 | 2.597357e-52 | -8.615850e-47 |
Msa0213430 | Msa0292790 | 0.876336 | 1.513678e-68 | -8.615850e-47 |
Msa0292790 | Msa1369320 | 0.802114 | 6.540986e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0292790 | MtrunA17_Chr2g0313621 | 94.195 | 758 | 40 | 1 | 21 | 774 | 1 | 758 | 0.0 | 1414 |
Msa0292790 | MtrunA17_Chr1g0156811 | 26.545 | 275 | 173 | 10 | 92 | 360 | 67 | 318 | 1.07e-17 | 87.4 |
Msa0292790 | MtrunA17_Chr1g0199571 | 24.908 | 273 | 177 | 9 | 92 | 358 | 67 | 317 | 3.58e-15 | 79.3 |
Msa0292790 | MtrunA17_Chr6g0484401 | 33.083 | 133 | 71 | 4 | 296 | 415 | 597 | 724 | 7.20e-14 | 75.5 |
Msa0292790 | MtrunA17_Chr4g0037111 | 25.000 | 276 | 172 | 10 | 92 | 358 | 67 | 316 | 8.17e-14 | 73.6 |
Msa0292790 | MtrunA17_Chr8g0351231 | 25.735 | 272 | 174 | 10 | 94 | 358 | 68 | 318 | 3.74e-12 | 69.7 |
Msa0292790 | MtrunA17_Chr8g0391121 | 30.769 | 117 | 70 | 3 | 305 | 415 | 613 | 724 | 7.48e-11 | 65.9 |
Msa0292790 | MtrunA17_Chr2g0290721 | 47.692 | 65 | 32 | 1 | 309 | 373 | 5 | 67 | 9.37e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0292790 | AT3G14590.2 | 66.358 | 648 | 195 | 11 | 44 | 678 | 20 | 657 | 0.0 | 838 |
Msa0292790 | AT1G53590.1 | 64.937 | 636 | 198 | 10 | 26 | 652 | 2 | 621 | 0.0 | 836 |
Msa0292790 | AT3G14590.3 | 66.614 | 629 | 187 | 11 | 63 | 678 | 8 | 626 | 0.0 | 810 |
Msa0292790 | AT3G14590.1 | 66.506 | 621 | 185 | 11 | 71 | 678 | 2 | 612 | 0.0 | 796 |
Msa0292790 | AT3G14590.5 | 64.716 | 581 | 182 | 11 | 111 | 678 | 1 | 571 | 0.0 | 717 |
Msa0292790 | AT3G14590.4 | 63.604 | 555 | 179 | 11 | 137 | 678 | 25 | 569 | 0.0 | 666 |
Msa0292790 | AT1G05500.1 | 25.735 | 272 | 179 | 9 | 89 | 356 | 64 | 316 | 8.38e-15 | 78.6 |
Msa0292790 | AT1G20080.2 | 23.077 | 273 | 181 | 9 | 92 | 358 | 67 | 316 | 6.57e-14 | 75.9 |
Msa0292790 | AT1G20080.3 | 23.077 | 273 | 181 | 9 | 92 | 358 | 67 | 316 | 6.57e-14 | 75.9 |
Msa0292790 | AT1G20080.4 | 23.077 | 273 | 181 | 9 | 92 | 358 | 67 | 316 | 6.57e-14 | 75.9 |
Msa0292790 | AT1G20080.1 | 23.077 | 273 | 181 | 9 | 92 | 358 | 67 | 316 | 6.57e-14 | 75.9 |
Msa0292790 | AT1G20080.5 | 23.077 | 273 | 181 | 9 | 92 | 358 | 67 | 316 | 6.57e-14 | 75.9 |
Msa0292790 | AT5G04220.3 | 22.028 | 286 | 198 | 8 | 92 | 373 | 5 | 269 | 1.88e-13 | 73.9 |
Msa0292790 | AT5G04220.2 | 22.648 | 287 | 195 | 9 | 92 | 373 | 67 | 331 | 4.65e-13 | 73.2 |
Msa0292790 | AT3G19830.1 | 22.280 | 386 | 253 | 15 | 90 | 444 | 198 | 567 | 2.42e-11 | 67.8 |
Msa0292790 | AT3G19830.3 | 22.280 | 386 | 253 | 15 | 90 | 444 | 198 | 567 | 2.42e-11 | 67.8 |
Msa0292790 | AT3G19830.2 | 22.280 | 386 | 253 | 15 | 90 | 444 | 198 | 567 | 2.42e-11 | 67.8 |
Msa0292790 | AT3G19830.4 | 22.280 | 386 | 253 | 15 | 90 | 444 | 198 | 567 | 2.42e-11 | 67.8 |
Msa0292790 | AT1G50260.1 | 21.522 | 460 | 300 | 19 | 90 | 505 | 186 | 628 | 2.51e-11 | 67.8 |
Msa0292790 | AT3G18370.1 | 35.135 | 111 | 61 | 3 | 311 | 415 | 611 | 716 | 4.15e-11 | 67.0 |
Find 178 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAATTCCTCTTGCCATTT+TGG | 0.089795 | 2_3:+42387442 | None:intergenic |
TTCTGTTCAGCACCTATATT+TGG | 0.118354 | 2_3:-42388938 | Msa0292790:CDS |
ACTTTAGTTCTTGCATCTTT+TGG | 0.183440 | 2_3:+42384234 | None:intergenic |
ATCTGGAAAATCTCCAAAAT+TGG | 0.203589 | 2_3:-42384916 | Msa0292790:CDS |
ATATGTATAATTTGAGAAAA+TGG | 0.213431 | 2_3:-42383874 | Msa0292790:three_prime_UTR |
TCATAGTTATCTGCCAATTT+TGG | 0.215229 | 2_3:+42384903 | None:intergenic |
AAGAAATGGTGGCAGATAAA+AGG | 0.236308 | 2_3:-42384005 | Msa0292790:CDS |
TTATATGTTATGTTATATTT+TGG | 0.237466 | 2_3:-42383729 | Msa0292790:three_prime_UTR |
CACCTTTGATTACTGATATC+AGG | 0.238503 | 2_3:-42388906 | Msa0292790:CDS |
GGCTTTGATCTATCTTTATC+TGG | 0.247822 | 2_3:-42390374 | Msa0292790:intron |
AACCACATTCACATCGGATT+TGG | 0.255125 | 2_3:+42384134 | None:intergenic |
ATTTGGGGAACTTCGCTTCC+TGG | 0.256187 | 2_3:+42384831 | None:intergenic |
TCTCTCTTTGCCGGGCTATC+AGG | 0.263166 | 2_3:+42384429 | None:intergenic |
AACCTCATTAACATCGGATT+TGG | 0.269470 | 2_3:+42384173 | None:intergenic |
TCCTTGACGTCTCTCTTTGC+CGG | 0.274210 | 2_3:+42384420 | None:intergenic |
ATTTCGTAGGAGTCGGAAAA+TGG | 0.284800 | 2_3:-42384619 | Msa0292790:CDS |
AGAAAACACTTTCTCCAAAA+TGG | 0.300673 | 2_3:-42387456 | Msa0292790:CDS |
ACCACATTCACATCGGATTT+GGG | 0.307145 | 2_3:+42384135 | None:intergenic |
GGCTGTAATTCAACTGTATC+TGG | 0.309334 | 2_3:-42384738 | Msa0292790:CDS |
AACATCAACAACCAGCATAT+TGG | 0.311236 | 2_3:+42387943 | None:intergenic |
TTGACAGTCATCTGAAAATA+TGG | 0.314441 | 2_3:+42388363 | None:intergenic |
ACCATGCAGTTGAAAATATA+TGG | 0.315669 | 2_3:-42389274 | Msa0292790:CDS |
ACCTCATTAACATCGGATTT+GGG | 0.316761 | 2_3:+42384174 | None:intergenic |
TCCTTATGTGAAAGGTCATT+TGG | 0.327934 | 2_3:-42387509 | Msa0292790:CDS |
CTTCAATGTCTATTGTCTCT+TGG | 0.331491 | 2_3:+42384997 | None:intergenic |
AACCAATGTCACTCTCTTGC+AGG | 0.335753 | 2_3:-42386864 | Msa0292790:CDS |
CTTTCCGACTGGTAAGATTC+AGG | 0.339765 | 2_3:-42384481 | Msa0292790:CDS |
TCCTTCTCATCCGTTTCATC+TGG | 0.345735 | 2_3:-42384933 | Msa0292790:CDS |
CATCTCCACGTGATAACATT+AGG | 0.350904 | 2_3:-42384563 | Msa0292790:CDS |
CGGAAAATGGACGATAATTC+AGG | 0.353749 | 2_3:-42384606 | Msa0292790:CDS |
TCTAAGAACCATGGTATGAT+AGG | 0.363312 | 2_3:+42389209 | None:intergenic |
ACATCAACAACCAGCATATT+GGG | 0.372605 | 2_3:+42387944 | None:intergenic |
TCAATGCAGGTTCTTGAGTT+AGG | 0.375126 | 2_3:-42388770 | Msa0292790:intron |
ATGAAGCCATCAGATCTAAA+TGG | 0.379168 | 2_3:-42387626 | Msa0292790:intron |
GGTCAGTAAATGCTTCTAAA+GGG | 0.385901 | 2_3:-42384542 | Msa0292790:CDS |
ACAAGCCAGCCAGCAATTCC+TGG | 0.385953 | 2_3:+42388303 | None:intergenic |
GATGGAAAGTCCTGCGCAAT+AGG | 0.388349 | 2_3:+42384582 | None:intergenic |
TATACATATGTTTATATGTC+GGG | 0.400062 | 2_3:+42383888 | None:intergenic |
GGTTGGCGTGAAGTTTGTTA+TGG | 0.403419 | 2_3:-42384520 | Msa0292790:CDS |
GTTACAATCCCATGTTATGA+TGG | 0.407165 | 2_3:+42387414 | None:intergenic |
AATAACAGTTCTTGATGATA+AGG | 0.416703 | 2_3:-42386746 | Msa0292790:CDS |
AGAAATGGTGGCAGATAAAA+GGG | 0.422355 | 2_3:-42384004 | Msa0292790:CDS |
AAATATATGGCCTATATGTA+TGG | 0.428426 | 2_3:-42389261 | Msa0292790:CDS |
CAAATATCTTTACCTTGGTC+TGG | 0.430139 | 2_3:+42387905 | None:intergenic |
ACAGAACTTCCAGGAATTGC+TGG | 0.430424 | 2_3:-42388312 | Msa0292790:CDS |
GTGGGTTTCTTCCCAAATAT+AGG | 0.432753 | 2_3:+42388926 | None:intergenic |
ATCTTATTGTTATAGAGCCT+TGG | 0.437260 | 2_3:-42387712 | Msa0292790:intron |
CCTTATGTGAAAGGTCATTT+GGG | 0.442994 | 2_3:-42387508 | Msa0292790:CDS |
GCAATCTGTTCCATACATAT+AGG | 0.443303 | 2_3:+42389251 | None:intergenic |
TCTGTTCAGCACCTATATTT+GGG | 0.444459 | 2_3:-42388937 | Msa0292790:CDS |
CTTGATGTGACAGAACTTCC+AGG | 0.446186 | 2_3:-42388321 | Msa0292790:CDS |
AGGAAAGGCCTGCACAAAAT+CGG | 0.446259 | 2_3:-42384648 | Msa0292790:CDS |
TCCAAACACCTGTCTTCTCT+TGG | 0.447465 | 2_3:+42384862 | None:intergenic |
GCCAAGAGAAGACAGGTGTT+TGG | 0.448255 | 2_3:-42384863 | Msa0292790:CDS |
CCTTGACGTCTCTCTTTGCC+GGG | 0.450193 | 2_3:+42384421 | None:intergenic |
ACTGCTGCTGTCATTGTTCA+AGG | 0.451580 | 2_3:+42384713 | None:intergenic |
ATTTGGGAGGATATAGATTC+AGG | 0.451759 | 2_3:-42387492 | Msa0292790:CDS |
CGAACATGATAAAGAAGAAA+TGG | 0.452429 | 2_3:-42384019 | Msa0292790:CDS |
AAATTTGAAATATGAATTGT+CGG | 0.454393 | 2_3:-42383801 | Msa0292790:three_prime_UTR |
GTCAACAAAGCTGCATATAA+CGG | 0.454586 | 2_3:-42388672 | Msa0292790:CDS |
CCCAAATGACCTTTCACATA+AGG | 0.456580 | 2_3:+42387508 | None:intergenic |
ATGGGATTGTAACAATGTTC+TGG | 0.457201 | 2_3:-42387404 | Msa0292790:CDS |
TCAACAAAGCTGCATATAAC+GGG | 0.457469 | 2_3:-42388671 | Msa0292790:CDS |
GGATGAGAAGGAACCTTTGT+TGG | 0.462679 | 2_3:+42384944 | None:intergenic |
ATGTTCTTTCTCGTAAATCA+AGG | 0.468368 | 2_3:-42384344 | Msa0292790:CDS |
AGGTCAGTAAATGCTTCTAA+AGG | 0.471451 | 2_3:-42384543 | Msa0292790:CDS |
AACACTGCTGGCTTTCCGAC+TGG | 0.476491 | 2_3:-42384492 | Msa0292790:CDS |
CTTGTTGACCACAGTGGTGT+TGG | 0.476585 | 2_3:+42384098 | None:intergenic |
GAAAACAATCTAATCAAAGA+AGG | 0.477365 | 2_3:-42389823 | Msa0292790:CDS |
AACATCGAATGAAAACTGTT+AGG | 0.484264 | 2_3:-42384668 | Msa0292790:CDS |
GTTTCAATCTTGCATCATGC+TGG | 0.486325 | 2_3:-42390463 | Msa0292790:CDS |
ACATGCATCAACGTCGGTAT+CGG | 0.486409 | 2_3:-42383833 | Msa0292790:three_prime_UTR |
AACTTCCAGGAATTGCTGGC+TGG | 0.486710 | 2_3:-42388308 | Msa0292790:CDS |
ACTGGTAAGATTCAGGTAGA+AGG | 0.487108 | 2_3:-42384474 | Msa0292790:CDS |
ACAACACCAACAGCACTTAG+TGG | 0.487584 | 2_3:+42383630 | None:intergenic |
TTACAGCCACATATATCGTT+AGG | 0.490040 | 2_3:+42384753 | None:intergenic |
TATAGAGCCTTGGTTTAAAG+TGG | 0.492151 | 2_3:-42387702 | Msa0292790:intron |
TTATCTTCAGCATTATCATC+GGG | 0.493511 | 2_3:+42384690 | None:intergenic |
TTTCTGATTCTGAAACAGTT+CGG | 0.494262 | 2_3:-42389304 | Msa0292790:CDS |
AAATTTGCAGCCCAATATGC+TGG | 0.498130 | 2_3:-42387954 | Msa0292790:intron |
CCCTCTGAATTTCTGTGTCG+AGG | 0.498634 | 2_3:+42384778 | None:intergenic |
CCCCAAATCCGATGTTAATG+AGG | 0.499459 | 2_3:-42384175 | Msa0292790:CDS |
TAGTAACCATTTAGATCTGA+TGG | 0.506393 | 2_3:+42387620 | None:intergenic |
AGGGAGTGGTCCTGATAGCC+CGG | 0.515922 | 2_3:-42384439 | Msa0292790:CDS |
CGTAAATCAAGGAAATCAAA+AGG | 0.517549 | 2_3:-42384333 | Msa0292790:CDS |
TTTATCTTCAGCATTATCAT+CGG | 0.518677 | 2_3:+42384689 | None:intergenic |
AACGTTATGTTACAAGGCTA+AGG | 0.518852 | 2_3:-42389868 | Msa0292790:CDS |
CAAATGTGGGAGCCAAGAAA+AGG | 0.519554 | 2_3:-42384813 | Msa0292790:CDS |
ATAACGGGAATGCATGTTGA+AGG | 0.519584 | 2_3:-42388656 | Msa0292790:CDS |
TTTACTATAGGTCTTGGTAG+GGG | 0.520785 | 2_3:-42388445 | Msa0292790:intron |
AGTTCTTGATGATAAGGAAA+AGG | 0.524058 | 2_3:-42386740 | Msa0292790:intron |
AAGAACTAAAGTTGTTTCAC+AGG | 0.527604 | 2_3:-42384223 | Msa0292790:CDS |
ACCTTTGATTACTGATATCA+GGG | 0.529556 | 2_3:-42388905 | Msa0292790:CDS |
TCCAGATGAAACGGATGAGA+AGG | 0.532280 | 2_3:+42384932 | None:intergenic |
TTTCTTGGCTCCCACATTTG+GGG | 0.533313 | 2_3:+42384816 | None:intergenic |
GGTCAACAAGGAGCCTCAAA+AGG | 0.533735 | 2_3:-42384085 | Msa0292790:CDS |
CTAAGAACCATGGTATGATA+GGG | 0.535211 | 2_3:+42389210 | None:intergenic |
TTCATGAACGTTATGTTACA+AGG | 0.536010 | 2_3:-42389874 | Msa0292790:CDS |
TTACAATCCCATGTTATGAT+GGG | 0.539219 | 2_3:+42387415 | None:intergenic |
TTGACCACAGTGGTGTTGGA+TGG | 0.548005 | 2_3:+42384102 | None:intergenic |
GTTATGGATGATAACACTGC+TGG | 0.548074 | 2_3:-42384504 | Msa0292790:CDS |
GCCATTGCTCAAGGTAACAT+TGG | 0.548679 | 2_3:-42384201 | Msa0292790:CDS |
TTATACATATGTTTATATGT+CGG | 0.548793 | 2_3:+42383887 | None:intergenic |
CTCATTAACATCGGATTTGG+GGG | 0.549929 | 2_3:+42384176 | None:intergenic |
TCTTAGAGAAGTACAAACCT+TGG | 0.551181 | 2_3:-42389193 | Msa0292790:CDS |
TGAGAAGGAACCTTTGTTGG+TGG | 0.551198 | 2_3:+42384947 | None:intergenic |
ACACGTATACGACCAAGAAA+AGG | 0.551448 | 2_3:+42388402 | None:intergenic |
GTTTCACAGGCCATTGCTCA+AGG | 0.552763 | 2_3:-42384210 | Msa0292790:CDS |
CTAATGTTATCACGTGGAGA+TGG | 0.553752 | 2_3:+42384564 | None:intergenic |
GAAGCGAAGTTCCCCAAATG+TGG | 0.562195 | 2_3:-42384827 | Msa0292790:CDS |
CCTCATTAACATCGGATTTG+GGG | 0.563282 | 2_3:+42384175 | None:intergenic |
AAGGGTCTGTTCAAAAGCAA+TGG | 0.563438 | 2_3:+42388122 | None:intergenic |
CTGATTCTGAAACAGTTCGG+TGG | 0.563534 | 2_3:-42389301 | Msa0292790:CDS |
GTAAATGCTTCTAAAGGGGT+TGG | 0.564255 | 2_3:-42384537 | Msa0292790:CDS |
AAAAGGCATTCTCCCCTGAA+AGG | 0.566489 | 2_3:-42384068 | Msa0292790:CDS |
TAATTCAGGTCCTATTGCGC+AGG | 0.567039 | 2_3:-42384592 | Msa0292790:CDS |
TTCTCGTCCACTTTAAACCA+AGG | 0.567039 | 2_3:+42387695 | None:intergenic |
CCACATTCACATCGGATTTG+GGG | 0.569763 | 2_3:+42384136 | None:intergenic |
AAATCGGTTCTGTATTTCGT+AGG | 0.570323 | 2_3:-42384632 | Msa0292790:CDS |
ACCAATGTCACTCTCTTGCA+GGG | 0.571591 | 2_3:-42386863 | Msa0292790:CDS |
CTGATATCAGTAATCAAAGG+TGG | 0.571778 | 2_3:+42388907 | None:intergenic |
CACATTCACATCGGATTTGG+GGG | 0.573608 | 2_3:+42384137 | None:intergenic |
GGTGGATCAACGGAAGGGAG+TGG | 0.574578 | 2_3:-42384453 | Msa0292790:CDS |
TCAGAATTCCCATCATAACA+TGG | 0.575057 | 2_3:-42387423 | Msa0292790:CDS |
CCCCAAATCCGATGTGAATG+TGG | 0.579254 | 2_3:-42384136 | Msa0292790:CDS |
GTTCTGTATTTCGTAGGAGT+CGG | 0.580650 | 2_3:-42384626 | Msa0292790:CDS |
CAGAATTCCCATCATAACAT+GGG | 0.581021 | 2_3:-42387422 | Msa0292790:CDS |
GCAAATGAGACCACCAACAA+AGG | 0.582885 | 2_3:-42384957 | Msa0292790:CDS |
ACCAATGTTACCTTGAGCAA+TGG | 0.583614 | 2_3:+42384200 | None:intergenic |
AAAGAGAGACGTCAAGGACA+TGG | 0.585649 | 2_3:-42384415 | Msa0292790:CDS |
GTCAGTAAATGCTTCTAAAG+GGG | 0.587217 | 2_3:-42384541 | Msa0292790:CDS |
AGACTTCACTCACCTCAACA+AGG | 0.587867 | 2_3:+42388103 | None:intergenic |
TTGGTTTAAAGTGGACGAGA+AGG | 0.592908 | 2_3:-42387693 | Msa0292790:CDS |
ATTGAAGGCCAAGAGAAGAC+AGG | 0.595022 | 2_3:-42384870 | Msa0292790:CDS |
GGGAATGCATGTTGAAGGGA+AGG | 0.595088 | 2_3:-42388651 | Msa0292790:intron |
GGGTGAAGTTCCTCAAGGAA+TGG | 0.596250 | 2_3:-42388425 | Msa0292790:CDS |
AAAACAATCTAATCAAAGAA+GGG | 0.596262 | 2_3:-42389822 | Msa0292790:intron |
GTAGAAGGTGGATCAACGGA+AGG | 0.599566 | 2_3:-42384459 | Msa0292790:CDS |
CAACACCACTGTGGTCAACA+AGG | 0.602995 | 2_3:-42384097 | Msa0292790:CDS |
GAGCTGTGTTCGATATCTGT+CGG | 0.603441 | 2_3:+42383910 | None:intergenic |
GCCTCGACACAGAAATTCAG+AGG | 0.603945 | 2_3:-42384779 | Msa0292790:CDS |
TAAACTTGTTTATGAAAACA+AGG | 0.609122 | 2_3:+42383655 | None:intergenic |
TCAGGTAGAAGGTGGATCAA+CGG | 0.609378 | 2_3:-42384463 | Msa0292790:CDS |
CGAATGAAAACTGTTAGGAA+AGG | 0.609904 | 2_3:-42384663 | Msa0292790:CDS |
ATGAATCATACAGCAGTCCA+AGG | 0.611982 | 2_3:+42389176 | None:intergenic |
GGTAAGATTCAGGTAGAAGG+TGG | 0.612543 | 2_3:-42384471 | Msa0292790:CDS |
TCCCTGCAAGAGAGTGACAT+TGG | 0.612837 | 2_3:+42386862 | None:intergenic |
ATGACCTTTCACATAAGGAT+CGG | 0.615098 | 2_3:+42387513 | None:intergenic |
TTAGCCGATCCTTATGTGAA+AGG | 0.615463 | 2_3:-42387517 | Msa0292790:CDS |
CAAGAAAAGGCCATTCCTTG+AGG | 0.616347 | 2_3:+42388415 | None:intergenic |
AGGGAACCTAACGATATATG+TGG | 0.618706 | 2_3:-42384759 | Msa0292790:CDS |
TATGTGAAAGGTCATTTGGG+AGG | 0.619001 | 2_3:-42387505 | Msa0292790:CDS |
TAACGGGAATGCATGTTGAA+GGG | 0.621171 | 2_3:-42388655 | Msa0292790:CDS |
CCCGGCAAAGAGAGACGTCA+AGG | 0.621860 | 2_3:-42384421 | Msa0292790:CDS |
TTTATGCCACTAAGTGCTGT+TGG | 0.622596 | 2_3:-42383636 | Msa0292790:three_prime_UTR |
GGTGTTTGGATACATCAGCC+AGG | 0.623254 | 2_3:-42384849 | Msa0292790:CDS |
ACCCTGATATCAGTAATCAA+AGG | 0.627115 | 2_3:+42388904 | None:intergenic |
AAGCGAAGTTCCCCAAATGT+GGG | 0.628739 | 2_3:-42384826 | Msa0292790:CDS |
CCAGTGTGATGATGACCACT+TGG | 0.631960 | 2_3:-42388875 | Msa0292790:intron |
ACTTTCTCCAAAATGGCAAG+AGG | 0.641409 | 2_3:-42387449 | Msa0292790:CDS |
TGATATCAGTAATCAAAGGT+GGG | 0.644175 | 2_3:+42388908 | None:intergenic |
TTGTACTTCTCTAAGAACCA+TGG | 0.644582 | 2_3:+42389200 | None:intergenic |
GACTTCACTCACCTCAACAA+GGG | 0.645139 | 2_3:+42388104 | None:intergenic |
ATTGTGAACCTCATTAACAT+CGG | 0.648603 | 2_3:+42384167 | None:intergenic |
GGTAGGGGTGAAGTTCCTCA+AGG | 0.658397 | 2_3:-42388430 | Msa0292790:CDS |
TAGAAGGTGGATCAACGGAA+GGG | 0.663587 | 2_3:-42384458 | Msa0292790:CDS |
TCTACCTGAATCTTACCAGT+CGG | 0.664384 | 2_3:+42384477 | None:intergenic |
ACATGATAAAGAAGAAATGG+TGG | 0.668596 | 2_3:-42384016 | Msa0292790:CDS |
ACAGTCATCTGAAAATATGG+AGG | 0.673844 | 2_3:+42388366 | None:intergenic |
CCAAGTGGTCATCATCACAC+TGG | 0.674932 | 2_3:+42388875 | None:intergenic |
AGGCTCCTTGTTGACCACAG+TGG | 0.684496 | 2_3:+42384092 | None:intergenic |
ATTGTGAACCACATTCACAT+CGG | 0.691176 | 2_3:+42384128 | None:intergenic |
CCTCGACACAGAAATTCAGA+GGG | 0.702383 | 2_3:-42384778 | Msa0292790:CDS |
AAACAGAGCGTTAACAAACG+AGG | 0.703478 | 2_3:+42390910 | None:intergenic |
AAATTTGTATCACCAGACCA+AGG | 0.724755 | 2_3:-42387917 | Msa0292790:intron |
ACTGACCTAATGTTATCACG+TGG | 0.727696 | 2_3:+42384558 | None:intergenic |
GTAGCTACATGCATCAACGT+CGG | 0.739961 | 2_3:-42383839 | Msa0292790:three_prime_UTR |
TGTGCCATCCAACACCACTG+TGG | 0.765001 | 2_3:-42384106 | Msa0292790:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATCAAATTTTAATCAAA+TGG | - | chr2_3:42383908-42383927 | Msa0292790:three_prime_UTR | 10.0% |
!!! | ATATCAAATTTTAATCAAAT+GGG | - | chr2_3:42383909-42383928 | Msa0292790:three_prime_UTR | 10.0% |
!!! | ATATGCTTTTTTTTTTTTTA+TGG | - | chr2_3:42384245-42384264 | Msa0292790:CDS | 10.0% |
!!! | TTTTTTTGTCTTATTTATAA+AGG | - | chr2_3:42384504-42384523 | Msa0292790:CDS | 10.0% |
!!! | TTTTTTGTCTTATTTATAAA+GGG | - | chr2_3:42384505-42384524 | Msa0292790:CDS | 10.0% |
!!! | TTTATATTTGTTTTTACTAT+AGG | - | chr2_3:42386032-42386051 | Msa0292790:intron | 10.0% |
!!! | AATGATATCTAAAATAAAAT+TGG | + | chr2_3:42388414-42388433 | None:intergenic | 10.0% |
!!! | AATTTTATTTTAGATATCAT+TGG | - | chr2_3:42388413-42388432 | Msa0292790:CDS | 10.0% |
!! | TATTTACAATGAAAATAAAA+TGG | - | chr2_3:42389299-42389318 | Msa0292790:CDS | 10.0% |
!!! | TTATATGTTATGTTATATTT+TGG | - | chr2_3:42390760-42390779 | Msa0292790:intron | 10.0% |
!! | TGAATAGTAAAATATTGAAA+GGG | + | chr2_3:42383711-42383730 | None:intergenic | 15.0% |
!! | TTGAATAGTAAAATATTGAA+AGG | + | chr2_3:42383712-42383731 | None:intergenic | 15.0% |
!! | AAATTAAATGTGTGTAATTA+GGG | + | chr2_3:42383844-42383863 | None:intergenic | 15.0% |
!! | TAAATTAAATGTGTGTAATT+AGG | + | chr2_3:42383845-42383864 | None:intergenic | 15.0% |
!!! | TAATTACACACATTTAATTT+AGG | - | chr2_3:42383844-42383863 | Msa0292790:three_prime_UTR | 15.0% |
!!! | AATTACACACATTTAATTTA+GGG | - | chr2_3:42383845-42383864 | Msa0292790:three_prime_UTR | 15.0% |
!! | GATATTTAATCAAAAAAACA+CGG | + | chr2_3:42383894-42383913 | None:intergenic | 15.0% |
!!! | CTTTTTTTTTTTTTATGGTT+TGG | - | chr2_3:42384250-42384269 | Msa0292790:CDS | 15.0% |
!! | TGAACAATTAAAAATATAAC+AGG | + | chr2_3:42386516-42386535 | None:intergenic | 15.0% |
!!! | ATTCAAAGATTTGTTTAATA+AGG | + | chr2_3:42386686-42386705 | None:intergenic | 15.0% |
!! | AACAAATTATAGTATATTTC+AGG | - | chr2_3:42386948-42386967 | Msa0292790:intron | 15.0% |
!! | AATACAATATAGAAATAAGA+GGG | + | chr2_3:42387928-42387947 | None:intergenic | 15.0% |
!! | AAAAATAAAATATATGTAGC+TGG | - | chr2_3:42388454-42388473 | Msa0292790:intron | 15.0% |
!! | ATATTTATTATTATGGTCAA+TGG | + | chr2_3:42388522-42388541 | None:intergenic | 15.0% |
!!! | TCTTTTTGTTTCTAAAAATT+GGG | + | chr2_3:42388983-42389002 | None:intergenic | 15.0% |
!!! | TTCTTTTTGTTTCTAAAAAT+TGG | + | chr2_3:42388984-42389003 | None:intergenic | 15.0% |
!!! | AAAGAATATTTTCAAAAATG+CGG | - | chr2_3:42390098-42390117 | Msa0292790:intron | 15.0% |
!! | TTATACATATGTTTATATGT+CGG | + | chr2_3:42390605-42390624 | None:intergenic | 15.0% |
!! | ATATGTATAATTTGAGAAAA+TGG | - | chr2_3:42390615-42390634 | Msa0292790:intron | 15.0% |
!!! | AAATTTGAAATATGAATTGT+CGG | - | chr2_3:42390688-42390707 | Msa0292790:intron | 15.0% |
!! | GAATAGTAAAATATTGAAAG+GGG | + | chr2_3:42383710-42383729 | None:intergenic | 20.0% |
!!! | ATTACACACATTTAATTTAG+GGG | - | chr2_3:42383846-42383865 | Msa0292790:three_prime_UTR | 20.0% |
!!! | TTCTTCAGTTTTTGTTATAA+TGG | - | chr2_3:42383992-42384011 | Msa0292790:CDS | 20.0% |
!! | AAAACAATCTAATCAAAGAA+GGG | - | chr2_3:42384667-42384686 | Msa0292790:CDS | 20.0% |
!!! | ATAAGGTTTCTATTGATTAA+AGG | - | chr2_3:42384820-42384839 | Msa0292790:CDS | 20.0% |
!!! | TCTATTGATTAAAGGATAAA+AGG | - | chr2_3:42384828-42384847 | Msa0292790:CDS | 20.0% |
!! | GTTATGATGATTTACTAATA+TGG | - | chr2_3:42385104-42385123 | Msa0292790:intron | 20.0% |
!!! | TTTTCTTTATCATTGTCTTT+AGG | - | chr2_3:42385159-42385178 | Msa0292790:intron | 20.0% |
!! | AATATATGAAAGGAACAAAA+AGG | + | chr2_3:42385433-42385452 | None:intergenic | 20.0% |
!! | TTTGTTCCTTTCATATATTA+TGG | - | chr2_3:42385434-42385453 | Msa0292790:intron | 20.0% |
!! | AAGAAACCATAATATATGAA+AGG | + | chr2_3:42385443-42385462 | None:intergenic | 20.0% |
!!! | AAATATTCTTTTGCTGATTA+AGG | - | chr2_3:42385915-42385934 | Msa0292790:intron | 20.0% |
!!! | TCAATGACTAATGATTTTAA+CGG | + | chr2_3:42386630-42386649 | None:intergenic | 20.0% |
!! | CTCTATAACAATAAGATTTA+TGG | + | chr2_3:42386774-42386793 | None:intergenic | 20.0% |
!!! | AATATATTTTCACTAGATGT+CGG | - | chr2_3:42387333-42387352 | Msa0292790:intron | 20.0% |
!! | AAAGCAAATGTATATTAACA+AGG | + | chr2_3:42387389-42387408 | None:intergenic | 20.0% |
!! | ATATACAAGTTTCACATTAT+TGG | + | chr2_3:42387828-42387847 | None:intergenic | 20.0% |
!! | GAATACAATATAGAAATAAG+AGG | + | chr2_3:42387929-42387948 | None:intergenic | 20.0% |
!! | ATATTATAACTTCTAGATTC+AGG | - | chr2_3:42388083-42388102 | Msa0292790:intron | 20.0% |
!!! | TTTTAATAGTTGGGAATTAA+GGG | + | chr2_3:42388154-42388173 | None:intergenic | 20.0% |
!!! | TTGTGTTTGTTTTAATAGTT+GGG | + | chr2_3:42388163-42388182 | None:intergenic | 20.0% |
!!! | ATAAGTACATATGTTTGTTT+TGG | + | chr2_3:42388549-42388568 | None:intergenic | 20.0% |
!! | AACAATAGATCAAATAACAA+AGG | + | chr2_3:42389418-42389437 | None:intergenic | 20.0% |
!!! | CAATTTTGAATTATGTTTAC+AGG | - | chr2_3:42389450-42389469 | Msa0292790:intron | 20.0% |
!! | AATGAAAAAATTGTTATGTC+TGG | - | chr2_3:42390447-42390466 | Msa0292790:CDS | 20.0% |
!! | TATACATATGTTTATATGTC+GGG | + | chr2_3:42390604-42390623 | None:intergenic | 20.0% |
!!! | TTATGTTATATTTTGGTCAA+TGG | - | chr2_3:42390767-42390786 | Msa0292790:intron | 20.0% |
!!! | TAAACTTGTTTATGAAAACA+AGG | + | chr2_3:42390837-42390856 | None:intergenic | 20.0% |
!!! | ATGGATTGAGTTGAATAATT+GGG | + | chr2_3:42383642-42383661 | None:intergenic | 25.0% |
!!! | AATGGATTGAGTTGAATAAT+TGG | + | chr2_3:42383643-42383662 | None:intergenic | 25.0% |
! | AAGATTAATTGAAGTGGAAA+TGG | + | chr2_3:42383775-42383794 | None:intergenic | 25.0% |
! | AAGTCAAAGATTAATTGAAG+TGG | + | chr2_3:42383781-42383800 | None:intergenic | 25.0% |
! | ACTACTCATTAAATTTCACT+TGG | - | chr2_3:42383966-42383985 | Msa0292790:exon | 25.0% |
! | CTACTCATTAAATTTCACTT+GGG | - | chr2_3:42383967-42383986 | Msa0292790:exon | 25.0% |
!!! | TATGCTATGCTTTTTGATTT+TGG | - | chr2_3:42384195-42384214 | Msa0292790:CDS | 25.0% |
!! | TGGATCTATAATTTGTAGTT+TGG | - | chr2_3:42384471-42384490 | Msa0292790:CDS | 25.0% |
! | TTATAAAGGGTAAAGAGAAA+AGG | - | chr2_3:42384518-42384537 | Msa0292790:CDS | 25.0% |
! | TATAAAGGGTAAAGAGAAAA+GGG | - | chr2_3:42384519-42384538 | Msa0292790:CDS | 25.0% |
! | TAACCAAAAAAGGAAAGAAA+AGG | - | chr2_3:42384545-42384564 | Msa0292790:CDS | 25.0% |
! | AACCAAAAAAGGAAAGAAAA+GGG | - | chr2_3:42384546-42384565 | Msa0292790:CDS | 25.0% |
!!! | TTTGTTCTTTTTCTTTGGAA+AGG | - | chr2_3:42384592-42384611 | Msa0292790:CDS | 25.0% |
! | GAAAACAATCTAATCAAAGA+AGG | - | chr2_3:42384666-42384685 | Msa0292790:CDS | 25.0% |
! | AAATATATGGCCTATATGTA+TGG | - | chr2_3:42385228-42385247 | Msa0292790:intron | 25.0% |
! | GTCAAAGATAAATAACTGAA+AGG | + | chr2_3:42385342-42385361 | None:intergenic | 25.0% |
! | GAAAATGTTTGAACTTCATA+TGG | + | chr2_3:42385379-42385398 | None:intergenic | 25.0% |
! | TGTGAAACTAAGAAAAAGAT+TGG | - | chr2_3:42385784-42385803 | Msa0292790:intron | 25.0% |
! | GTGAAACTAAGAAAAAGATT+GGG | - | chr2_3:42385785-42385804 | Msa0292790:intron | 25.0% |
!! | GAATTTCAATTTTACCTAGA+CGG | - | chr2_3:42385871-42385890 | Msa0292790:intron | 25.0% |
!!! | TTTGTTTTTACTATAGGTCT+TGG | - | chr2_3:42386038-42386057 | Msa0292790:intron | 25.0% |
!!! | TCAAACCTATTTTTACACAT+GGG | - | chr2_3:42386145-42386164 | Msa0292790:intron | 25.0% |
! | AATCATTAGTCATTGAACAA+AGG | - | chr2_3:42386634-42386653 | Msa0292790:intron | 25.0% |
! | TTTAATAAGGATTCTAGTGA+GGG | + | chr2_3:42386673-42386692 | None:intergenic | 25.0% |
! | AAAAATATCATCACAGAGAA+AGG | + | chr2_3:42386897-42386916 | None:intergenic | 25.0% |
! | ACTATACTAAAAACCACATA+AGG | + | chr2_3:42387189-42387208 | None:intergenic | 25.0% |
!!! | TGGTTTTTAGTATAGTTCAA+TGG | - | chr2_3:42387193-42387212 | Msa0292790:intron | 25.0% |
! | TTAAAATTAGCAGTATGAGA+TGG | + | chr2_3:42387279-42387298 | None:intergenic | 25.0% |
! | AAACACAGTGATTGAATAAT+TGG | + | chr2_3:42387596-42387615 | None:intergenic | 25.0% |
!! | TGTGAACATCAATGATTTTA+GGG | - | chr2_3:42387656-42387675 | Msa0292790:CDS | 25.0% |
!! | AATAACAGTTCTTGATGATA+AGG | - | chr2_3:42387743-42387762 | Msa0292790:intron | 25.0% |
! | GAATGAATATAATTGAGGTA+AGG | + | chr2_3:42387792-42387811 | None:intergenic | 25.0% |
! | TATTATGTGAAAGTTGTAGA+TGG | + | chr2_3:42387980-42387999 | None:intergenic | 25.0% |
!!! | GTTTTAATAGTTGGGAATTA+AGG | + | chr2_3:42388155-42388174 | None:intergenic | 25.0% |
!!! | GTTGTGTTTGTTTTAATAGT+TGG | + | chr2_3:42388164-42388183 | None:intergenic | 25.0% |
! | AGATTGAATATCGTGAAAAA+AGG | + | chr2_3:42388368-42388387 | None:intergenic | 25.0% |
! | ATGATGTTGTAAGATATTGT+AGG | + | chr2_3:42388815-42388834 | None:intergenic | 25.0% |
! | AAAGAATGTACTTGTTTGAT+TGG | + | chr2_3:42388850-42388869 | None:intergenic | 25.0% |
! | TGATTTCGATGAAAAGAAAT+AGG | + | chr2_3:42388902-42388921 | None:intergenic | 25.0% |
! | TCGAAATCAAATGAAAAGAA+AGG | - | chr2_3:42388913-42388932 | Msa0292790:CDS | 25.0% |
! | ATCAAATGAAAAGAAAGGAA+AGG | - | chr2_3:42388918-42388937 | Msa0292790:CDS | 25.0% |
! | AGAATAATAAGTGGAACAAA+AGG | - | chr2_3:42388941-42388960 | Msa0292790:CDS | 25.0% |
! | TATGAGCCAATAAAAATTGA+AGG | - | chr2_3:42389604-42389623 | Msa0292790:intron | 25.0% |
! | TTTATCTTCAGCATTATCAT+CGG | + | chr2_3:42389803-42389822 | None:intergenic | 25.0% |
!!! | TTTTTTCATTAGACCTTTCA+GGG | + | chr2_3:42390437-42390456 | None:intergenic | 25.0% |
!!! | ATTTTTTCATTAGACCTTTC+AGG | + | chr2_3:42390438-42390457 | None:intergenic | 25.0% |
!!! | ATGTAGAGTACTTTTTGTTT+TGG | - | chr2_3:42390794-42390813 | Msa0292790:intron | 25.0% |
!!! | TTTTTGTTTTGGTGTAAAGT+AGG | - | chr2_3:42390805-42390824 | Msa0292790:intron | 25.0% |
!!! | TTTTGTTTTGGTGTAAAGTA+GGG | - | chr2_3:42390806-42390825 | Msa0292790:intron | 25.0% |
AATAATTGGGAAGAGTGAAA+CGG | + | chr2_3:42383629-42383648 | None:intergenic | 30.0% | |
AATTAGGGTTTACAAGGAAA+TGG | + | chr2_3:42383661-42383680 | None:intergenic | 30.0% | |
!! | GTGATAAAGTGTTGCAATTA+GGG | + | chr2_3:42383676-42383695 | None:intergenic | 30.0% |
TAAAATATTGAAAGGGGAGA+AGG | + | chr2_3:42383704-42383723 | None:intergenic | 30.0% | |
TAATTGAAGTGGAAATGGTT+TGG | + | chr2_3:42383770-42383789 | None:intergenic | 30.0% | |
!!! | GAATCGTTTTGATTTCTCTA+TGG | - | chr2_3:42384048-42384067 | Msa0292790:CDS | 30.0% |
!!! | TCATGCTGCTTTTTATTTTG+TGG | - | chr2_3:42384094-42384113 | Msa0292790:CDS | 30.0% |
! | TATGGTTTGGATTCATTAGT+TGG | - | chr2_3:42384263-42384282 | Msa0292790:CDS | 30.0% |
GCTAAACTTTACTTAGTAAC+CGG | + | chr2_3:42384350-42384369 | None:intergenic | 30.0% | |
!!! | ATTAGTTGGTGGTTTTGTAA+CGG | - | chr2_3:42384416-42384435 | Msa0292790:CDS | 30.0% |
AAAAGGGTTGTAACCAAAAA+AGG | - | chr2_3:42384535-42384554 | Msa0292790:CDS | 30.0% | |
! | TACCCTTTTCTTTCCTTTTT+TGG | + | chr2_3:42384551-42384570 | None:intergenic | 30.0% |
! | CTGACTTTGTTCTTTTTCTT+TGG | - | chr2_3:42384587-42384606 | Msa0292790:CDS | 30.0% |
TTCATGAACGTTATGTTACA+AGG | - | chr2_3:42384615-42384634 | Msa0292790:CDS | 30.0% | |
AAATAGAATCTGAACTTGAG+TGG | - | chr2_3:42384726-42384745 | Msa0292790:CDS | 30.0% | |
TCAAAACACATGAAAAGGAA+GGG | + | chr2_3:42384782-42384801 | None:intergenic | 30.0% | |
TTCAAAACACATGAAAAGGA+AGG | + | chr2_3:42384783-42384802 | None:intergenic | 30.0% | |
!! | TCCTTTTCATGTGTTTTGAA+TGG | - | chr2_3:42384783-42384802 | Msa0292790:CDS | 30.0% |
TCCATTCAAAACACATGAAA+AGG | + | chr2_3:42384787-42384806 | None:intergenic | 30.0% | |
TGGATTATTGCTTGTCAATA+AGG | - | chr2_3:42384803-42384822 | Msa0292790:CDS | 30.0% | |
TTAGAACATGTTTGCATTCA+CGG | + | chr2_3:42384987-42385006 | None:intergenic | 30.0% | |
ATCATTGTCTTGAGAGTTAT+TGG | - | chr2_3:42385051-42385070 | Msa0292790:intron | 30.0% | |
TCATTGTCTTGAGAGTTATT+GGG | - | chr2_3:42385052-42385071 | Msa0292790:intron | 30.0% | |
ACTAATATGGCCTATATGTA+TGG | - | chr2_3:42385117-42385136 | Msa0292790:intron | 30.0% | |
!! | TTTCTGATTCTGAAACAGTT+CGG | - | chr2_3:42385185-42385204 | Msa0292790:intron | 30.0% |
ACCATGCAGTTGAAAATATA+TGG | - | chr2_3:42385215-42385234 | Msa0292790:intron | 30.0% | |
TGAAAGGAACAAAAAGGAAA+AGG | + | chr2_3:42385427-42385446 | None:intergenic | 30.0% | |
CTGATCATACACAAAATCAA+AGG | + | chr2_3:42385494-42385513 | None:intergenic | 30.0% | |
TGATATCAGTAATCAAAGGT+GGG | + | chr2_3:42385584-42385603 | None:intergenic | 30.0% | |
ACCTTTGATTACTGATATCA+GGG | - | chr2_3:42385584-42385603 | Msa0292790:intron | 30.0% | |
TAAGAATGTTACATACCAAG+TGG | + | chr2_3:42385632-42385651 | None:intergenic | 30.0% | |
ATGTAACATTCTTAAGCAGA+AGG | - | chr2_3:42385638-42385657 | Msa0292790:intron | 30.0% | |
! | GTTAGGAATGAATTTTCTCA+CGG | - | chr2_3:42385736-42385755 | Msa0292790:intron | 30.0% |
! | TTAGGAATGAATTTTCTCAC+GGG | - | chr2_3:42385737-42385756 | Msa0292790:intron | 30.0% |
!! | ATTCTTTTGCTGATTAAGGT+CGG | - | chr2_3:42385919-42385938 | Msa0292790:intron | 30.0% |
! | TTTTTACTATAGGTCTTGGT+AGG | - | chr2_3:42386042-42386061 | Msa0292790:intron | 30.0% |
! | TTTTACTATAGGTCTTGGTA+GGG | - | chr2_3:42386043-42386062 | Msa0292790:intron | 30.0% |
TTGACAGTCATCTGAAAATA+TGG | + | chr2_3:42386129-42386148 | None:intergenic | 30.0% | |
!!! | GTCAAACCTATTTTTACACA+TGG | - | chr2_3:42386144-42386163 | Msa0292790:intron | 30.0% |
! | AAATTACTTGATTCGAGAGA+AGG | + | chr2_3:42386305-42386324 | None:intergenic | 30.0% |
CATGACAAATATCTTTACCT+TGG | + | chr2_3:42386592-42386611 | None:intergenic | 30.0% | |
GTTTAATAAGGATTCTAGTG+AGG | + | chr2_3:42386674-42386693 | None:intergenic | 30.0% | |
GTAACAATTATGTCAAGCAT+GGG | + | chr2_3:42386724-42386743 | None:intergenic | 30.0% | |
TGTAACAATTATGTCAAGCA+TGG | + | chr2_3:42386725-42386744 | None:intergenic | 30.0% | |
ATCTTATTGTTATAGAGCCT+TGG | - | chr2_3:42386777-42386796 | Msa0292790:CDS | 30.0% | |
TGCAAAAATCGAAATTGTTG+AGG | - | chr2_3:42386832-42386851 | Msa0292790:CDS | 30.0% | |
TAGTAACCATTTAGATCTGA+TGG | + | chr2_3:42386872-42386891 | None:intergenic | 30.0% | |
AGAAAACACTTTCTCCAAAA+TGG | - | chr2_3:42387033-42387052 | Msa0292790:intron | 30.0% | |
TTACAATCCCATGTTATGAT+GGG | + | chr2_3:42387077-42387096 | None:intergenic | 30.0% | |
ATTTCTATGATGACATCCTT+GGG | - | chr2_3:42387132-42387151 | Msa0292790:intron | 30.0% | |
! | ACTTTGAACTTTTCCTTATG+TGG | - | chr2_3:42387173-42387192 | Msa0292790:intron | 30.0% |
GAAACATGATAGTTTCTCAT+TGG | + | chr2_3:42387257-42387276 | None:intergenic | 30.0% | |
TTAAACTACCTGTACAATAG+TGG | - | chr2_3:42387295-42387314 | Msa0292790:intron | 30.0% | |
TAAACTACCTGTACAATAGT+GGG | - | chr2_3:42387296-42387315 | Msa0292790:intron | 30.0% | |
CTTCATGATAATAGCAGAAA+AGG | + | chr2_3:42387462-42387481 | None:intergenic | 30.0% | |
ACAGTGATTGAATAATTGGA+AGG | + | chr2_3:42387592-42387611 | None:intergenic | 30.0% | |
! | CTGTGAACATCAATGATTTT+AGG | - | chr2_3:42387655-42387674 | Msa0292790:CDS | 30.0% |
!! | AACATCAATGATTTTAGGGA+CGG | - | chr2_3:42387660-42387679 | Msa0292790:CDS | 30.0% |
! | AGTTCTTGATGATAAGGAAA+AGG | - | chr2_3:42387749-42387768 | Msa0292790:intron | 30.0% |
AATATAATTGAGGTAAGGTG+GGG | + | chr2_3:42387787-42387806 | None:intergenic | 30.0% | |
GAATATAATTGAGGTAAGGT+GGG | + | chr2_3:42387788-42387807 | None:intergenic | 30.0% | |
TGAATATAATTGAGGTAAGG+TGG | + | chr2_3:42387789-42387808 | None:intergenic | 30.0% | |
CATTATTGGATAATATTGCG+AGG | + | chr2_3:42387814-42387833 | None:intergenic | 30.0% | |
ATGTTGAGGAATCAACATAT+AGG | + | chr2_3:42387867-42387886 | None:intergenic | 30.0% | |
ATAGAAATAAGAGGGATTGT+AGG | + | chr2_3:42387920-42387939 | None:intergenic | 30.0% | |
! | ATCTGGAAGTGTATAGAAAA+GGG | + | chr2_3:42387953-42387972 | None:intergenic | 30.0% |
! | AATCTGGAAGTGTATAGAAA+AGG | + | chr2_3:42387954-42387973 | None:intergenic | 30.0% |
AAGTTGTAGATGGTATAATC+TGG | + | chr2_3:42387970-42387989 | None:intergenic | 30.0% | |
TGAGTGTTAAAATGTGTGTT+CGG | + | chr2_3:42388124-42388143 | None:intergenic | 30.0% | |
ATAAAGATCTCCAAAACGAT+TGG | + | chr2_3:42388276-42388295 | None:intergenic | 30.0% | |
GGAGATCTTTATGTATTAAC+AGG | - | chr2_3:42388284-42388303 | Msa0292790:intron | 30.0% | |
!! | CAATGCAACAATGTTTTTGA+AGG | + | chr2_3:42388332-42388351 | None:intergenic | 30.0% |
GTCAATTTCATTCTTGACAA+CGG | + | chr2_3:42388637-42388656 | None:intergenic | 30.0% | |
! | AAATTGACTTAGTACAAGAG+AGG | - | chr2_3:42388649-42388668 | Msa0292790:intron | 30.0% |
! | AATTGACTTAGTACAAGAGA+GGG | - | chr2_3:42388650-42388669 | Msa0292790:intron | 30.0% |
AAGGAAAGGAGAATAATAAG+TGG | - | chr2_3:42388932-42388951 | Msa0292790:CDS | 30.0% | |
ATCTGGAAAATCTCCAAAAT+TGG | - | chr2_3:42389573-42389592 | Msa0292790:intron | 30.0% | |
! | TCATAGTTATCTGCCAATTT+TGG | + | chr2_3:42389589-42389608 | None:intergenic | 30.0% |
!! | TCTTGGCCTTCAATTTTTAT+TGG | + | chr2_3:42389613-42389632 | None:intergenic | 30.0% |
TTATCTTCAGCATTATCATC+GGG | + | chr2_3:42389802-42389821 | None:intergenic | 30.0% | |
AACATCGAATGAAAACTGTT+AGG | - | chr2_3:42389821-42389840 | Msa0292790:intron | 30.0% | |
ATGTTCTTTCTCGTAAATCA+AGG | - | chr2_3:42390145-42390164 | Msa0292790:intron | 30.0% | |
CGTAAATCAAGGAAATCAAA+AGG | - | chr2_3:42390156-42390175 | Msa0292790:intron | 30.0% | |
!!! | TTTAGTTCTTGCATCTTTTG+GGG | + | chr2_3:42390256-42390275 | None:intergenic | 30.0% |
!!! | CTTTAGTTCTTGCATCTTTT+GGG | + | chr2_3:42390257-42390276 | None:intergenic | 30.0% |
!!! | ACTTTAGTTCTTGCATCTTT+TGG | + | chr2_3:42390258-42390277 | None:intergenic | 30.0% |
! | AAGAACTAAAGTTGTTTCAC+AGG | - | chr2_3:42390266-42390285 | Msa0292790:intron | 30.0% |
ATTGTGAACCTCATTAACAT+CGG | + | chr2_3:42390325-42390344 | None:intergenic | 30.0% | |
! | TTTTTCATTAGACCTTTCAG+GGG | + | chr2_3:42390436-42390455 | None:intergenic | 30.0% |
CGAACATGATAAAGAAGAAA+TGG | - | chr2_3:42390470-42390489 | Msa0292790:CDS | 30.0% | |
ACATGATAAAGAAGAAATGG+TGG | - | chr2_3:42390473-42390492 | Msa0292790:CDS | 30.0% | |
!! | AACAAAAAGTACTCTACATG+TGG | + | chr2_3:42390793-42390812 | None:intergenic | 30.0% |
TGTTGCAATTAGGGTTTACA+AGG | + | chr2_3:42383667-42383686 | None:intergenic | 35.0% | |
!! | GGTGATAAAGTGTTGCAATT+AGG | + | chr2_3:42383677-42383696 | None:intergenic | 35.0% |
! | AAGTGGAAATGGTTTGGATA+TGG | + | chr2_3:42383764-42383783 | None:intergenic | 35.0% |
!!! | TTCATTCCTTTTTTCGCAAG+TGG | - | chr2_3:42383812-42383831 | Msa0292790:three_prime_UTR | 35.0% |
!!! | TCATTCCTTTTTTCGCAAGT+GGG | - | chr2_3:42383813-42383832 | Msa0292790:three_prime_UTR | 35.0% |
! | GGCTTTGATCTATCTTTATC+TGG | - | chr2_3:42384115-42384134 | Msa0292790:CDS | 35.0% |
TGATCTATCTTTATCTGGTG+AGG | - | chr2_3:42384120-42384139 | Msa0292790:CDS | 35.0% | |
!! | GGTTTCTGCTTTTGAACTTT+TGG | - | chr2_3:42384156-42384175 | Msa0292790:CDS | 35.0% |
TTCCATCCAAAAATCGAACT+CGG | - | chr2_3:42384383-42384402 | Msa0292790:CDS | 35.0% | |
AACGTTATGTTACAAGGCTA+AGG | - | chr2_3:42384621-42384640 | Msa0292790:CDS | 35.0% | |
CAAAACACATGAAAAGGAAG+GGG | + | chr2_3:42384781-42384800 | None:intergenic | 35.0% | |
GTGAATGCAAACATGTTCTA+AGG | - | chr2_3:42384986-42385005 | Msa0292790:CDS | 35.0% | |
CATTGTCTTGAGAGTTATTG+GGG | - | chr2_3:42385053-42385072 | Msa0292790:intron | 35.0% | |
GCAATCTGTTCCATACATAT+AGG | + | chr2_3:42385130-42385149 | None:intergenic | 35.0% | |
! | GCCATATATTTTCAACTGCA+TGG | + | chr2_3:42385219-42385238 | None:intergenic | 35.0% |
GCAATCTGTTCCATACATAT+AGG | + | chr2_3:42385130-42385149 | None:intergenic | 35.0% | |
! | TTTTACTCCCTATCATACCA+TGG | - | chr2_3:42385272-42385291 | Msa0292790:intron | 35.0% |
CTAAGAACCATGGTATGATA+GGG | + | chr2_3:42385282-42385301 | None:intergenic | 35.0% | |
TCTAAGAACCATGGTATGAT+AGG | + | chr2_3:42385283-42385302 | None:intergenic | 35.0% | |
! | TTGTACTTCTCTAAGAACCA+TGG | + | chr2_3:42385292-42385311 | None:intergenic | 35.0% |
! | TCTTAGAGAAGTACAAACCT+TGG | - | chr2_3:42385296-42385315 | Msa0292790:intron | 35.0% |
GGAACAAAAAGGAAAAGGAA+TGG | + | chr2_3:42385422-42385441 | None:intergenic | 35.0% | |
TTCTGTTCAGCACCTATATT+TGG | - | chr2_3:42385551-42385570 | Msa0292790:intron | 35.0% | |
TCTGTTCAGCACCTATATTT+GGG | - | chr2_3:42385552-42385571 | Msa0292790:intron | 35.0% | |
CTGATATCAGTAATCAAAGG+TGG | + | chr2_3:42385585-42385604 | None:intergenic | 35.0% | |
CACCTTTGATTACTGATATC+AGG | - | chr2_3:42385583-42385602 | Msa0292790:intron | 35.0% | |
ACCCTGATATCAGTAATCAA+AGG | + | chr2_3:42385588-42385607 | None:intergenic | 35.0% | |
CTAAGAAAAAGATTGGGCTT+TGG | - | chr2_3:42385791-42385810 | Msa0292790:intron | 35.0% | |
GTCAACAAAGCTGCATATAA+CGG | - | chr2_3:42385817-42385836 | Msa0292790:intron | 35.0% | |
TCAACAAAGCTGCATATAAC+GGG | - | chr2_3:42385818-42385837 | Msa0292790:intron | 35.0% | |
CATATACAACAAATCCGTCT+AGG | + | chr2_3:42385888-42385907 | None:intergenic | 35.0% | |
TTTACTATAGGTCTTGGTAG+GGG | - | chr2_3:42386044-42386063 | Msa0292790:intron | 35.0% | |
ACAGTCATCTGAAAATATGG+AGG | + | chr2_3:42386126-42386145 | None:intergenic | 35.0% | |
TCAAGCCCATGTGTAAAAAT+AGG | + | chr2_3:42386153-42386172 | None:intergenic | 35.0% | |
ACATCAACAACCAGCATATT+GGG | + | chr2_3:42386548-42386567 | None:intergenic | 35.0% | |
AACATCAACAACCAGCATAT+TGG | + | chr2_3:42386549-42386568 | None:intergenic | 35.0% | |
AAATTTGTATCACCAGACCA+AGG | - | chr2_3:42386572-42386591 | Msa0292790:intron | 35.0% | |
CAAATATCTTTACCTTGGTC+TGG | + | chr2_3:42386587-42386606 | None:intergenic | 35.0% | |
TATAGAGCCTTGGTTTAAAG+TGG | - | chr2_3:42386787-42386806 | Msa0292790:CDS | 35.0% | |
! | TCGATTTTTGCATAAGCAAC+AGG | + | chr2_3:42386824-42386843 | None:intergenic | 35.0% |
ATGAAGCCATCAGATCTAAA+TGG | - | chr2_3:42386863-42386882 | Msa0292790:CDS | 35.0% | |
ATGACCTTTCACATAAGGAT+CGG | + | chr2_3:42386979-42386998 | None:intergenic | 35.0% | |
TCCTTATGTGAAAGGTCATT+TGG | - | chr2_3:42386980-42386999 | Msa0292790:intron | 35.0% | |
CCTTATGTGAAAGGTCATTT+GGG | - | chr2_3:42386981-42387000 | Msa0292790:intron | 35.0% | |
ATTTGGGAGGATATAGATTC+AGG | - | chr2_3:42386997-42387016 | Msa0292790:intron | 35.0% | |
TCAGAATTCCCATCATAACA+TGG | - | chr2_3:42387066-42387085 | Msa0292790:intron | 35.0% | |
CAGAATTCCCATCATAACAT+GGG | - | chr2_3:42387067-42387086 | Msa0292790:intron | 35.0% | |
GTTACAATCCCATGTTATGA+TGG | + | chr2_3:42387078-42387097 | None:intergenic | 35.0% | |
ATGGGATTGTAACAATGTTC+TGG | - | chr2_3:42387085-42387104 | Msa0292790:intron | 35.0% | |
CAAGGATGTCATCATAGAAA+TGG | + | chr2_3:42387133-42387152 | None:intergenic | 35.0% | |
CATTTCTATGATGACATCCT+TGG | - | chr2_3:42387131-42387150 | Msa0292790:intron | 35.0% | |
AAGTTCAAAGTTCAGACAGA+CGG | + | chr2_3:42387164-42387183 | None:intergenic | 35.0% | |
ATGATAATAGCAGAAAAGGC+AGG | + | chr2_3:42387458-42387477 | None:intergenic | 35.0% | |
! | CAAACAAAGTGCTAGAGAAA+AGG | + | chr2_3:42387522-42387541 | None:intergenic | 35.0% |
! | CTTTTCTCTAGCACTTTGTT+TGG | - | chr2_3:42387520-42387539 | Msa0292790:CDS | 35.0% |
!! | ACATCAATGATTTTAGGGAC+GGG | - | chr2_3:42387661-42387680 | Msa0292790:CDS | 35.0% |
ACGGGCAAAAATATGATAAG+TGG | - | chr2_3:42387679-42387698 | Msa0292790:CDS | 35.0% | |
CGGGCAAAAATATGATAAGT+GGG | - | chr2_3:42387680-42387699 | Msa0292790:CDS | 35.0% | |
CCACTACAGAGAGTAAAAAT+GGG | - | chr2_3:42387705-42387724 | Msa0292790:intron | 35.0% | |
CACTACAGAGAGTAAAAATG+GGG | - | chr2_3:42387706-42387725 | Msa0292790:intron | 35.0% | |
ATATAATTGAGGTAAGGTGG+GGG | + | chr2_3:42387786-42387805 | None:intergenic | 35.0% | |
GCGAGGAATGAATATAATTG+AGG | + | chr2_3:42387797-42387816 | None:intergenic | 35.0% | |
! | GAGGCACTATTATACTTATG+TGG | + | chr2_3:42387898-42387917 | None:intergenic | 35.0% |
GAGTGTTAAAATGTGTGTTC+GGG | + | chr2_3:42388123-42388142 | None:intergenic | 35.0% | |
TAATAGTTGGGAATTAAGGG+CGG | + | chr2_3:42388151-42388170 | None:intergenic | 35.0% | |
!! | TGGCTCTTTTTCATTTTGTG+TGG | + | chr2_3:42388256-42388275 | None:intergenic | 35.0% |
! | TGAAAAAGAGCCAATCGTTT+TGG | - | chr2_3:42388263-42388282 | Msa0292790:intron | 35.0% |
TTCTTGACAACGGAATGAAT+TGG | + | chr2_3:42388627-42388646 | None:intergenic | 35.0% | |
GAATTAACGCAAGTCTTACT+TGG | + | chr2_3:42388691-42388710 | None:intergenic | 35.0% | |
ATAACTAGAGTGTAACTCGT+GGG | + | chr2_3:42389210-42389229 | None:intergenic | 35.0% | |
TATAACTAGAGTGTAACTCG+TGG | + | chr2_3:42389211-42389230 | None:intergenic | 35.0% | |
AATAACAAAGGAGCAACTTG+TGG | + | chr2_3:42389406-42389425 | None:intergenic | 35.0% | |
CTTCAATGTCTATTGTCTCT+TGG | + | chr2_3:42389495-42389514 | None:intergenic | 35.0% | |
! | TGGAGATTTTCCAGATGAAA+CGG | + | chr2_3:42389569-42389588 | None:intergenic | 35.0% |
TTACAGCCACATATATCGTT+AGG | + | chr2_3:42389739-42389758 | None:intergenic | 35.0% | |
CGAATGAAAACTGTTAGGAA+AGG | - | chr2_3:42389826-42389845 | Msa0292790:CDS | 35.0% | |
! | AAATCGGTTCTGTATTTCGT+AGG | - | chr2_3:42389857-42389876 | Msa0292790:CDS | 35.0% |
AGGTCAGTAAATGCTTCTAA+AGG | - | chr2_3:42389946-42389965 | Msa0292790:intron | 35.0% | |
GGTCAGTAAATGCTTCTAAA+GGG | - | chr2_3:42389947-42389966 | Msa0292790:intron | 35.0% | |
! | GTCAGTAAATGCTTCTAAAG+GGG | - | chr2_3:42389948-42389967 | Msa0292790:intron | 35.0% |
ACCTCATTAACATCGGATTT+GGG | + | chr2_3:42390318-42390337 | None:intergenic | 35.0% | |
AACCTCATTAACATCGGATT+TGG | + | chr2_3:42390319-42390338 | None:intergenic | 35.0% | |
ATTGTGAACCACATTCACAT+CGG | + | chr2_3:42390364-42390383 | None:intergenic | 35.0% | |
AAGAAATGGTGGCAGATAAA+AGG | - | chr2_3:42390484-42390503 | Msa0292790:CDS | 35.0% | |
AGAAATGGTGGCAGATAAAA+GGG | - | chr2_3:42390485-42390504 | Msa0292790:CDS | 35.0% | |
!! | TTTTGGTGTAAAGTAGGGAT+AGG | - | chr2_3:42390811-42390830 | Msa0292790:intron | 35.0% |
! | AAACAGAGCGTTAACAAACG+AGG | + | chr2_3:42383582-42383601 | None:intergenic | 40.0% |
ATTGAAAGGGGAGAAGGTAA+CGG | + | chr2_3:42383698-42383717 | None:intergenic | 40.0% | |
! | GGAAATGGTTTGGATATGGT+GGG | + | chr2_3:42383760-42383779 | None:intergenic | 40.0% |
! | TGGAAATGGTTTGGATATGG+TGG | + | chr2_3:42383761-42383780 | None:intergenic | 40.0% |
!!! | CATTCCTTTTTTCGCAAGTG+GGG | - | chr2_3:42383814-42383833 | Msa0292790:three_prime_UTR | 40.0% |
TTAACCCCACTTGCGAAAAA+AGG | + | chr2_3:42383821-42383840 | None:intergenic | 40.0% | |
! | TAGGGGTTTCCTTTTTAACG+CGG | - | chr2_3:42383863-42383882 | Msa0292790:three_prime_UTR | 40.0% |
ACGGAAAAACCGCGTTAAAA+AGG | + | chr2_3:42383875-42383894 | None:intergenic | 40.0% | |
GTTTCAATCTTGCATCATGC+TGG | - | chr2_3:42384026-42384045 | Msa0292790:CDS | 40.0% | |
CTTTATCTGGTGAGGATTCA+TGG | - | chr2_3:42384128-42384147 | Msa0292790:CDS | 40.0% | |
! | TGGTGAGGATTCATGGTTTT+TGG | - | chr2_3:42384135-42384154 | Msa0292790:CDS | 40.0% |
GGTTTGGATTCATTAGTTGG+TGG | - | chr2_3:42384266-42384285 | Msa0292790:CDS | 40.0% | |
!! | TGTTAACCCTCCAGTTTTGA+GGG | - | chr2_3:42384299-42384318 | Msa0292790:CDS | 40.0% |
TCCATCCAAAAATCGAACTC+GGG | - | chr2_3:42384384-42384403 | Msa0292790:CDS | 40.0% | |
! | AAGAACCCGAGTTCGATTTT+TGG | + | chr2_3:42384392-42384411 | None:intergenic | 40.0% |
TCGGGTTCTTCTGAATTAGT+TGG | - | chr2_3:42384402-42384421 | Msa0292790:CDS | 40.0% | |
GGTTCTTCTGAATTAGTTGG+TGG | - | chr2_3:42384405-42384424 | Msa0292790:CDS | 40.0% | |
GAGCACTTATTCTGAGTGAT+TGG | - | chr2_3:42384451-42384470 | Msa0292790:CDS | 40.0% | |
! | AGTAGTGAGCTCTGCAATTT+TGG | + | chr2_3:42384942-42384961 | None:intergenic | 40.0% |
! | CTCACTACTCACTGTGATTT+TGG | - | chr2_3:42384953-42384972 | Msa0292790:CDS | 40.0% |
ATGAATCATACAGCAGTCCA+AGG | + | chr2_3:42385316-42385335 | None:intergenic | 40.0% | |
GTGGGTTTCTTCCCAAATAT+AGG | + | chr2_3:42385566-42385585 | None:intergenic | 40.0% | |
! | TTTTACGCTGTGATCAATGC+AGG | - | chr2_3:42385706-42385725 | Msa0292790:intron | 40.0% |
TCAATGCAGGTTCTTGAGTT+AGG | - | chr2_3:42385719-42385738 | Msa0292790:intron | 40.0% | |
! | ATAACGGGAATGCATGTTGA+AGG | - | chr2_3:42385833-42385852 | Msa0292790:intron | 40.0% |
TAACGGGAATGCATGTTGAA+GGG | - | chr2_3:42385834-42385853 | Msa0292790:intron | 40.0% | |
ACACGTATACGACCAAGAAA+AGG | + | chr2_3:42386090-42386109 | None:intergenic | 40.0% | |
!! | TCGTGACTTTTCGTTGTTTC+AGG | - | chr2_3:42386332-42386351 | Msa0292790:intron | 40.0% |
AAGGGTCTGTTCAAAAGCAA+TGG | + | chr2_3:42386370-42386389 | None:intergenic | 40.0% | |
! | TTTTGAACAGACCCTTGTTG+AGG | - | chr2_3:42386374-42386393 | Msa0292790:intron | 40.0% |
AAATTTGCAGCCCAATATGC+TGG | - | chr2_3:42386535-42386554 | Msa0292790:intron | 40.0% | |
AGGATTCTAGTGAGGGTTAT+GGG | + | chr2_3:42386666-42386685 | None:intergenic | 40.0% | |
AAGGATTCTAGTGAGGGTTA+TGG | + | chr2_3:42386667-42386686 | None:intergenic | 40.0% | |
TTCTCGTCCACTTTAAACCA+AGG | + | chr2_3:42386797-42386816 | None:intergenic | 40.0% | |
! | TTGGTTTAAAGTGGACGAGA+AGG | - | chr2_3:42386796-42386815 | Msa0292790:CDS | 40.0% |
TTAGCCGATCCTTATGTGAA+AGG | - | chr2_3:42386972-42386991 | Msa0292790:intron | 40.0% | |
CCCAAATGACCTTTCACATA+AGG | + | chr2_3:42386984-42387003 | None:intergenic | 40.0% | |
TATGTGAAAGGTCATTTGGG+AGG | - | chr2_3:42386984-42387003 | Msa0292790:intron | 40.0% | |
ACTTTCTCCAAAATGGCAAG+AGG | - | chr2_3:42387040-42387059 | Msa0292790:intron | 40.0% | |
!! | CTGAATTCCTCTTGCCATTT+TGG | + | chr2_3:42387050-42387069 | None:intergenic | 40.0% |
GGTTATTGAAGTTCGTGACA+AGG | - | chr2_3:42387106-42387125 | Msa0292790:intron | 40.0% | |
CACTAGATGTCGGTGTAAAA+TGG | - | chr2_3:42387343-42387362 | Msa0292790:intron | 40.0% | |
GCCACTACAGAGAGTAAAAA+TGG | - | chr2_3:42387704-42387723 | Msa0292790:intron | 40.0% | |
!! | CCCATTTTTACTCTCTGTAG+TGG | + | chr2_3:42387708-42387727 | None:intergenic | 40.0% |
TACAGAGAGTAAAAATGGGG+AGG | - | chr2_3:42387709-42387728 | Msa0292790:intron | 40.0% | |
AGGAATCAACATATAGGCTC+AGG | + | chr2_3:42387861-42387880 | None:intergenic | 40.0% | |
ATGTGGAGTGAACAATGTTG+AGG | + | chr2_3:42387881-42387900 | None:intergenic | 40.0% | |
GAAATAAGAGGGATTGTAGG+AGG | + | chr2_3:42387917-42387936 | None:intergenic | 40.0% | |
! | TGAAGTCCGCACATTTTTGT+AGG | + | chr2_3:42388484-42388503 | None:intergenic | 40.0% |
ATAACTAGAGTGTAACCCGT+GGG | + | chr2_3:42389341-42389360 | None:intergenic | 40.0% | |
TATAACTAGAGTGTAACCCG+TGG | + | chr2_3:42389342-42389361 | None:intergenic | 40.0% | |
! | TTTTCTTGGCTCCCACATTT+GGG | + | chr2_3:42389677-42389696 | None:intergenic | 40.0% |
AGGGAACCTAACGATATATG+TGG | - | chr2_3:42389730-42389749 | Msa0292790:intron | 40.0% | |
GGCTGTAATTCAACTGTATC+TGG | - | chr2_3:42389751-42389770 | Msa0292790:intron | 40.0% | |
!! | ATACAGAACCGATTTTGTGC+AGG | + | chr2_3:42389852-42389871 | None:intergenic | 40.0% |
GTTCTGTATTTCGTAGGAGT+CGG | - | chr2_3:42389863-42389882 | Msa0292790:CDS | 40.0% | |
ATTTCGTAGGAGTCGGAAAA+TGG | - | chr2_3:42389870-42389889 | Msa0292790:CDS | 40.0% | |
CGGAAAATGGACGATAATTC+AGG | - | chr2_3:42389883-42389902 | Msa0292790:intron | 40.0% | |
CTAATGTTATCACGTGGAGA+TGG | + | chr2_3:42389928-42389947 | None:intergenic | 40.0% | |
CATCTCCACGTGATAACATT+AGG | - | chr2_3:42389926-42389945 | Msa0292790:intron | 40.0% | |
ACTGACCTAATGTTATCACG+TGG | + | chr2_3:42389934-42389953 | None:intergenic | 40.0% | |
! | GTAAATGCTTCTAAAGGGGT+TGG | - | chr2_3:42389952-42389971 | Msa0292790:intron | 40.0% |
GTTATGGATGATAACACTGC+TGG | - | chr2_3:42389985-42390004 | Msa0292790:intron | 40.0% | |
TCTACCTGAATCTTACCAGT+CGG | + | chr2_3:42390015-42390034 | None:intergenic | 40.0% | |
ACTGGTAAGATTCAGGTAGA+AGG | - | chr2_3:42390015-42390034 | Msa0292790:intron | 40.0% | |
ACCAATGTTACCTTGAGCAA+TGG | + | chr2_3:42390292-42390311 | None:intergenic | 40.0% | |
CTCATTAACATCGGATTTGG+GGG | + | chr2_3:42390316-42390335 | None:intergenic | 40.0% | |
CCTCATTAACATCGGATTTG+GGG | + | chr2_3:42390317-42390336 | None:intergenic | 40.0% | |
ACCACATTCACATCGGATTT+GGG | + | chr2_3:42390357-42390376 | None:intergenic | 40.0% | |
AACCACATTCACATCGGATT+TGG | + | chr2_3:42390358-42390377 | None:intergenic | 40.0% | |
! | TTTATGCCACTAAGTGCTGT+TGG | - | chr2_3:42390853-42390872 | Msa0292790:intron | 40.0% |
!!! | GTTGTACTTTTTCAGCTGAG+AGG | - | chr2_3:42390877-42390896 | Msa0292790:intron | 40.0% |
TGACGTAAAGGGGAAGTAAC+GGG | + | chr2_3:42383606-42383625 | None:intergenic | 45.0% | |
GTGACGTAAAGGGGAAGTAA+CGG | + | chr2_3:42383607-42383626 | None:intergenic | 45.0% | |
AGTGAAACGGTGACGTAAAG+GGG | + | chr2_3:42383616-42383635 | None:intergenic | 45.0% | |
GAGTGAAACGGTGACGTAAA+GGG | + | chr2_3:42383617-42383636 | None:intergenic | 45.0% | |
AGAGTGAAACGGTGACGTAA+AGG | + | chr2_3:42383618-42383637 | None:intergenic | 45.0% | |
! | GTGTTAACCCTCCAGTTTTG+AGG | - | chr2_3:42384298-42384317 | Msa0292790:CDS | 45.0% |
!! | ACCCGAGTTCGATTTTTGGA+TGG | + | chr2_3:42384388-42384407 | None:intergenic | 45.0% |
!! | CTGATTCTGAAACAGTTCGG+TGG | - | chr2_3:42385188-42385207 | Msa0292790:intron | 45.0% |
ATGCATGTTGAAGGGAAGGT+AGG | - | chr2_3:42385842-42385861 | Msa0292790:intron | 45.0% | |
CAAGAAAAGGCCATTCCTTG+AGG | + | chr2_3:42386077-42386096 | None:intergenic | 45.0% | |
! | CTCAAGGAATGGCCTTTTCT+TGG | - | chr2_3:42386075-42386094 | Msa0292790:intron | 45.0% |
CTTGATGTGACAGAACTTCC+AGG | - | chr2_3:42386168-42386187 | Msa0292790:intron | 45.0% | |
ACAGAACTTCCAGGAATTGC+TGG | - | chr2_3:42386177-42386196 | Msa0292790:intron | 45.0% | |
GACTTCACTCACCTCAACAA+GGG | + | chr2_3:42386388-42386407 | None:intergenic | 45.0% | |
AGACTTCACTCACCTCAACA+AGG | + | chr2_3:42386389-42386408 | None:intergenic | 45.0% | |
GGATTCTAGTGAGGGTTATG+GGG | + | chr2_3:42386665-42386684 | None:intergenic | 45.0% | |
CACATCACCCACTATTGTAC+AGG | + | chr2_3:42387306-42387325 | None:intergenic | 45.0% | |
!! | CTGTACAATAGTGGGTGATG+TGG | - | chr2_3:42387304-42387323 | Msa0292790:intron | 45.0% |
AACCAATGTCACTCTCTTGC+AGG | - | chr2_3:42387625-42387644 | Msa0292790:intron | 45.0% | |
ACCAATGTCACTCTCTTGCA+GGG | - | chr2_3:42387626-42387645 | Msa0292790:intron | 45.0% | |
GGCAAGCCTACAAAAATGTG+CGG | - | chr2_3:42388475-42388494 | Msa0292790:intron | 45.0% | |
! | CTTAGTACAAGAGAGGGCAT+TGG | - | chr2_3:42388656-42388675 | Msa0292790:CDS | 45.0% |
GCAAATGAGACCACCAACAA+AGG | - | chr2_3:42389532-42389551 | Msa0292790:intron | 45.0% | |
TGAGAAGGAACCTTTGTTGG+TGG | + | chr2_3:42389545-42389564 | None:intergenic | 45.0% | |
GGATGAGAAGGAACCTTTGT+TGG | + | chr2_3:42389548-42389567 | None:intergenic | 45.0% | |
TCCTTCTCATCCGTTTCATC+TGG | - | chr2_3:42389556-42389575 | Msa0292790:intron | 45.0% | |
TCCAGATGAAACGGATGAGA+AGG | + | chr2_3:42389560-42389579 | None:intergenic | 45.0% | |
ATTGAAGGCCAAGAGAAGAC+AGG | - | chr2_3:42389619-42389638 | Msa0292790:intron | 45.0% | |
TCCAAACACCTGTCTTCTCT+TGG | + | chr2_3:42389630-42389649 | None:intergenic | 45.0% | |
AAGCGAAGTTCCCCAAATGT+GGG | - | chr2_3:42389663-42389682 | Msa0292790:intron | 45.0% | |
TTTCTTGGCTCCCACATTTG+GGG | + | chr2_3:42389676-42389695 | None:intergenic | 45.0% | |
! | CTTTTCTTGGCTCCCACATT+TGG | + | chr2_3:42389678-42389697 | None:intergenic | 45.0% |
CAAATGTGGGAGCCAAGAAA+AGG | - | chr2_3:42389676-42389695 | Msa0292790:intron | 45.0% | |
!!! | CGTCGATTCTTGCCTTTTCT+TGG | + | chr2_3:42389691-42389710 | None:intergenic | 45.0% |
CCTCGACACAGAAATTCAGA+GGG | - | chr2_3:42389711-42389730 | Msa0292790:intron | 45.0% | |
ACTGCTGCTGTCATTGTTCA+AGG | + | chr2_3:42389779-42389798 | None:intergenic | 45.0% | |
AGGAAAGGCCTGCACAAAAT+CGG | - | chr2_3:42389841-42389860 | Msa0292790:CDS | 45.0% | |
TAATTCAGGTCCTATTGCGC+AGG | - | chr2_3:42389897-42389916 | Msa0292790:intron | 45.0% | |
!! | GGTTGGCGTGAAGTTTGTTA+TGG | - | chr2_3:42389969-42389988 | Msa0292790:intron | 45.0% |
CTTTCCGACTGGTAAGATTC+AGG | - | chr2_3:42390008-42390027 | Msa0292790:intron | 45.0% | |
GGTAAGATTCAGGTAGAAGG+TGG | - | chr2_3:42390018-42390037 | Msa0292790:intron | 45.0% | |
TCAGGTAGAAGGTGGATCAA+CGG | - | chr2_3:42390026-42390045 | Msa0292790:intron | 45.0% | |
TAGAAGGTGGATCAACGGAA+GGG | - | chr2_3:42390031-42390050 | Msa0292790:intron | 45.0% | |
AAAGAGAGACGTCAAGGACA+TGG | - | chr2_3:42390074-42390093 | Msa0292790:intron | 45.0% | |
GCCATTGCTCAAGGTAACAT+TGG | - | chr2_3:42390288-42390307 | Msa0292790:intron | 45.0% | |
CCCCAAATCCGATGTTAATG+AGG | - | chr2_3:42390314-42390333 | Msa0292790:intron | 45.0% | |
CACATTCACATCGGATTTGG+GGG | + | chr2_3:42390355-42390374 | None:intergenic | 45.0% | |
CCACATTCACATCGGATTTG+GGG | + | chr2_3:42390356-42390375 | None:intergenic | 45.0% | |
!! | AAAAGGCATTCTCCCCTGAA+AGG | - | chr2_3:42390421-42390440 | Msa0292790:CDS | 45.0% |
GAGCTGTGTTCGATATCTGT+CGG | + | chr2_3:42390582-42390601 | None:intergenic | 45.0% | |
GTAGCTACATGCATCAACGT+CGG | - | chr2_3:42390650-42390669 | Msa0292790:intron | 45.0% | |
ACATGCATCAACGTCGGTAT+CGG | - | chr2_3:42390656-42390675 | Msa0292790:intron | 45.0% | |
ACAACACCAACAGCACTTAG+TGG | + | chr2_3:42390862-42390881 | None:intergenic | 45.0% | |
!!! | GTTATAATATTTTTTATTTT+TGG | + | chr2_3:42388073-42388092 | None:intergenic | 5.0% |
!!! | TAACCCTCCAGTTTTGAGGG+AGG | - | chr2_3:42384302-42384321 | Msa0292790:CDS | 50.0% |
!!! | AACCCTCCAGTTTTGAGGGA+GGG | - | chr2_3:42384303-42384322 | Msa0292790:CDS | 50.0% |
CTTAGTAACCGGCTGAACTC+CGG | + | chr2_3:42384339-42384358 | None:intergenic | 50.0% | |
CTTGAGAGTTATTGGGGCTG+TGG | - | chr2_3:42385059-42385078 | Msa0292790:intron | 50.0% | |
CCAAGTGGTCATCATCACAC+TGG | + | chr2_3:42385617-42385636 | None:intergenic | 50.0% | |
! | CCAGTGTGATGATGACCACT+TGG | - | chr2_3:42385614-42385633 | Msa0292790:intron | 50.0% |
GGGAATGCATGTTGAAGGGA+AGG | - | chr2_3:42385838-42385857 | Msa0292790:intron | 50.0% | |
TTGAAGGGAAGGTAGGACTG+CGG | - | chr2_3:42385849-42385868 | Msa0292790:intron | 50.0% | |
GGGTGAAGTTCCTCAAGGAA+TGG | - | chr2_3:42386064-42386083 | Msa0292790:intron | 50.0% | |
AACTTCCAGGAATTGCTGGC+TGG | - | chr2_3:42386181-42386200 | Msa0292790:intron | 50.0% | |
!! | ATTGCTGGCTGGCTTGTAAG+TGG | - | chr2_3:42386192-42386211 | Msa0292790:intron | 50.0% |
AGACAGACGGAACTAACCCA+AGG | + | chr2_3:42387151-42387170 | None:intergenic | 50.0% | |
TCCCTGCAAGAGAGTGACAT+TGG | + | chr2_3:42387630-42387649 | None:intergenic | 50.0% | |
TAATTGAGGTAAGGTGGGGG+AGG | + | chr2_3:42387783-42387802 | None:intergenic | 50.0% | |
GCCAAGAGAAGACAGGTGTT+TGG | - | chr2_3:42389626-42389645 | Msa0292790:intron | 50.0% | |
GGTGTTTGGATACATCAGCC+AGG | - | chr2_3:42389640-42389659 | Msa0292790:intron | 50.0% | |
ATTTGGGGAACTTCGCTTCC+TGG | + | chr2_3:42389661-42389680 | None:intergenic | 50.0% | |
GAAGCGAAGTTCCCCAAATG+TGG | - | chr2_3:42389662-42389681 | Msa0292790:intron | 50.0% | |
GCCTCGACACAGAAATTCAG+AGG | - | chr2_3:42389710-42389729 | Msa0292790:intron | 50.0% | |
CCCTCTGAATTTCTGTGTCG+AGG | + | chr2_3:42389714-42389733 | None:intergenic | 50.0% | |
GATGGAAAGTCCTGCGCAAT+AGG | + | chr2_3:42389910-42389929 | None:intergenic | 50.0% | |
GTAGAAGGTGGATCAACGGA+AGG | - | chr2_3:42390030-42390049 | Msa0292790:intron | 50.0% | |
TCCTTGACGTCTCTCTTTGC+CGG | + | chr2_3:42390072-42390091 | None:intergenic | 50.0% | |
GTTTCACAGGCCATTGCTCA+AGG | - | chr2_3:42390279-42390298 | Msa0292790:intron | 50.0% | |
CCCCAAATCCGATGTGAATG+TGG | - | chr2_3:42390353-42390372 | Msa0292790:intron | 50.0% | |
! | TTGACCACAGTGGTGTTGGA+TGG | + | chr2_3:42390390-42390409 | None:intergenic | 50.0% |
CTTGTTGACCACAGTGGTGT+TGG | + | chr2_3:42390394-42390413 | None:intergenic | 50.0% | |
CAACACCACTGTGGTCAACA+AGG | - | chr2_3:42390392-42390411 | Msa0292790:CDS | 50.0% | |
GGTCAACAAGGAGCCTCAAA+AGG | - | chr2_3:42390404-42390423 | Msa0292790:CDS | 50.0% | |
! | TCAGGGGAGAATGCCTTTTG+AGG | + | chr2_3:42390420-42390439 | None:intergenic | 50.0% |
!!! | ACCCTCCAGTTTTGAGGGAG+GGG | - | chr2_3:42384304-42384323 | Msa0292790:CDS | 55.0% |
CTGGTAATCCGGAGTTCAGC+CGG | - | chr2_3:42384328-42384347 | Msa0292790:CDS | 55.0% | |
GGTAGGGGTGAAGTTCCTCA+AGG | - | chr2_3:42386059-42386078 | Msa0292790:intron | 55.0% | |
ACAAGCCAGCCAGCAATTCC+TGG | + | chr2_3:42386189-42386208 | None:intergenic | 55.0% | |
!! | GGCTGGCTTGTAAGTGGACA+TGG | - | chr2_3:42386198-42386217 | Msa0292790:intron | 55.0% |
ATCAACACACGCGCAACCCA+CGG | - | chr2_3:42389322-42389341 | Msa0292790:intron | 55.0% | |
!! | AACACTGCTGGCTTTCCGAC+TGG | - | chr2_3:42389997-42390016 | Msa0292790:intron | 55.0% |
TCTCTCTTTGCCGGGCTATC+AGG | + | chr2_3:42390063-42390082 | None:intergenic | 55.0% | |
CCTTGACGTCTCTCTTTGCC+GGG | + | chr2_3:42390071-42390090 | None:intergenic | 55.0% | |
TGTGCCATCCAACACCACTG+TGG | - | chr2_3:42390383-42390402 | Msa0292790:CDS | 55.0% | |
AGGCTCCTTGTTGACCACAG+TGG | + | chr2_3:42390400-42390419 | None:intergenic | 55.0% | |
GCCCCTCCCTCAAAACTGGA+GGG | + | chr2_3:42384308-42384327 | None:intergenic | 60.0% | |
CGGCTGAACTCCGGATTACC+AGG | + | chr2_3:42384330-42384349 | None:intergenic | 60.0% | |
TGAGGTAAGGTGGGGGAGGA+GGG | + | chr2_3:42387779-42387798 | None:intergenic | 60.0% | |
TTGAGGTAAGGTGGGGGAGG+AGG | + | chr2_3:42387780-42387799 | None:intergenic | 60.0% | |
TCAACACACGCGCAACCCAC+GGG | - | chr2_3:42389323-42389342 | Msa0292790:intron | 60.0% | |
GAGCAACTTGTGGCGCTACG+TGG | + | chr2_3:42389396-42389415 | None:intergenic | 60.0% | |
GGTGGATCAACGGAAGGGAG+TGG | - | chr2_3:42390036-42390055 | Msa0292790:intron | 60.0% | |
AGGGAGTGGTCCTGATAGCC+CGG | - | chr2_3:42390050-42390069 | Msa0292790:intron | 60.0% | |
CCCGGCAAAGAGAGACGTCA+AGG | - | chr2_3:42390068-42390087 | Msa0292790:intron | 60.0% | |
GGCCCCTCCCTCAAAACTGG+AGG | + | chr2_3:42384309-42384328 | None:intergenic | 65.0% | |
CCAGGCCCCTCCCTCAAAAC+TGG | + | chr2_3:42384312-42384331 | None:intergenic | 65.0% | |
!!! | CCAGTTTTGAGGGAGGGGCC+TGG | - | chr2_3:42384309-42384328 | Msa0292790:CDS | 65.0% |
GAGGGAGGGGCCTGGTAATC+CGG | - | chr2_3:42384317-42384336 | Msa0292790:CDS | 65.0% | |
GAGGTAAGGTGGGGGAGGAG+GGG | + | chr2_3:42387778-42387797 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 42383546 | 42390965 | 42383546 | ID=Msa0292790;Name=Msa0292790 |
chr2_3 | mRNA | 42383546 | 42390965 | 42383546 | ID=Msa0292790-mRNA-1;Parent=Msa0292790;Name=Msa0292790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.83|0.69|1|0.83|0.69|13|435|774 |
chr2_3 | exon | 42383546 | 42385039 | 42383546 | ID=Msa0292790-mRNA-1:exon:13595;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42386741 | 42386886 | 42386741 | ID=Msa0292790-mRNA-1:exon:13594;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42387392 | 42387541 | 42387392 | ID=Msa0292790-mRNA-1:exon:13593;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42387627 | 42387719 | 42387627 | ID=Msa0292790-mRNA-1:exon:13592;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42387918 | 42387966 | 42387918 | ID=Msa0292790-mRNA-1:exon:13591;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42388116 | 42388157 | 42388116 | ID=Msa0292790-mRNA-1:exon:13590;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42388305 | 42388457 | 42388305 | ID=Msa0292790-mRNA-1:exon:13589;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42388652 | 42388783 | 42388652 | ID=Msa0292790-mRNA-1:exon:13588;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42388876 | 42388968 | 42388876 | ID=Msa0292790-mRNA-1:exon:13587;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42389187 | 42389330 | 42389187 | ID=Msa0292790-mRNA-1:exon:13586;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42389823 | 42389897 | 42389823 | ID=Msa0292790-mRNA-1:exon:13585;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42390375 | 42390511 | 42390375 | ID=Msa0292790-mRNA-1:exon:13584;Parent=Msa0292790-mRNA-1 |
chr2_3 | exon | 42390914 | 42390965 | 42390914 | ID=Msa0292790-mRNA-1:exon:13583;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42390914 | 42390965 | 42390914 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42390375 | 42390511 | 42390375 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42389823 | 42389897 | 42389823 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42389187 | 42389330 | 42389187 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42388876 | 42388968 | 42388876 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42388652 | 42388783 | 42388652 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42388305 | 42388457 | 42388305 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42388116 | 42388157 | 42388116 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42387918 | 42387966 | 42387918 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42387627 | 42387719 | 42387627 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42387392 | 42387541 | 42387392 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42386741 | 42386886 | 42386741 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | CDS | 42383981 | 42385039 | 42383981 | ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1 |
chr2_3 | three_prime_UTR | 42383546 | 42383980 | 42383546 | ID=Msa0292790-mRNA-1:three_prime_utr;Parent=Msa0292790-mRNA-1 |
Gene Sequence |
Protein sequence |