AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0292790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292790 MtrunA17_Chr2g0313621 94.195 758 40 1 21 774 1 758 0.0 1414
Msa0292790 MtrunA17_Chr1g0156811 26.545 275 173 10 92 360 67 318 1.07e-17 87.4
Msa0292790 MtrunA17_Chr1g0199571 24.908 273 177 9 92 358 67 317 3.58e-15 79.3
Msa0292790 MtrunA17_Chr6g0484401 33.083 133 71 4 296 415 597 724 7.20e-14 75.5
Msa0292790 MtrunA17_Chr4g0037111 25.000 276 172 10 92 358 67 316 8.17e-14 73.6
Msa0292790 MtrunA17_Chr8g0351231 25.735 272 174 10 94 358 68 318 3.74e-12 69.7
Msa0292790 MtrunA17_Chr8g0391121 30.769 117 70 3 305 415 613 724 7.48e-11 65.9
Msa0292790 MtrunA17_Chr2g0290721 47.692 65 32 1 309 373 5 67 9.37e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292790 AT3G14590.2 66.358 648 195 11 44 678 20 657 0.0 838
Msa0292790 AT1G53590.1 64.937 636 198 10 26 652 2 621 0.0 836
Msa0292790 AT3G14590.3 66.614 629 187 11 63 678 8 626 0.0 810
Msa0292790 AT3G14590.1 66.506 621 185 11 71 678 2 612 0.0 796
Msa0292790 AT3G14590.5 64.716 581 182 11 111 678 1 571 0.0 717
Msa0292790 AT3G14590.4 63.604 555 179 11 137 678 25 569 0.0 666
Msa0292790 AT1G05500.1 25.735 272 179 9 89 356 64 316 8.38e-15 78.6
Msa0292790 AT1G20080.2 23.077 273 181 9 92 358 67 316 6.57e-14 75.9
Msa0292790 AT1G20080.3 23.077 273 181 9 92 358 67 316 6.57e-14 75.9
Msa0292790 AT1G20080.4 23.077 273 181 9 92 358 67 316 6.57e-14 75.9
Msa0292790 AT1G20080.1 23.077 273 181 9 92 358 67 316 6.57e-14 75.9
Msa0292790 AT1G20080.5 23.077 273 181 9 92 358 67 316 6.57e-14 75.9
Msa0292790 AT5G04220.3 22.028 286 198 8 92 373 5 269 1.88e-13 73.9
Msa0292790 AT5G04220.2 22.648 287 195 9 92 373 67 331 4.65e-13 73.2
Msa0292790 AT3G19830.1 22.280 386 253 15 90 444 198 567 2.42e-11 67.8
Msa0292790 AT3G19830.3 22.280 386 253 15 90 444 198 567 2.42e-11 67.8
Msa0292790 AT3G19830.2 22.280 386 253 15 90 444 198 567 2.42e-11 67.8
Msa0292790 AT3G19830.4 22.280 386 253 15 90 444 198 567 2.42e-11 67.8
Msa0292790 AT1G50260.1 21.522 460 300 19 90 505 186 628 2.51e-11 67.8
Msa0292790 AT3G18370.1 35.135 111 61 3 311 415 611 716 4.15e-11 67.0

Find 178 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTCCTCTTGCCATTT+TGG 0.089795 2_3:+42387442 None:intergenic
TTCTGTTCAGCACCTATATT+TGG 0.118354 2_3:-42388938 Msa0292790:CDS
ACTTTAGTTCTTGCATCTTT+TGG 0.183440 2_3:+42384234 None:intergenic
ATCTGGAAAATCTCCAAAAT+TGG 0.203589 2_3:-42384916 Msa0292790:CDS
ATATGTATAATTTGAGAAAA+TGG 0.213431 2_3:-42383874 Msa0292790:three_prime_UTR
TCATAGTTATCTGCCAATTT+TGG 0.215229 2_3:+42384903 None:intergenic
AAGAAATGGTGGCAGATAAA+AGG 0.236308 2_3:-42384005 Msa0292790:CDS
TTATATGTTATGTTATATTT+TGG 0.237466 2_3:-42383729 Msa0292790:three_prime_UTR
CACCTTTGATTACTGATATC+AGG 0.238503 2_3:-42388906 Msa0292790:CDS
GGCTTTGATCTATCTTTATC+TGG 0.247822 2_3:-42390374 Msa0292790:intron
AACCACATTCACATCGGATT+TGG 0.255125 2_3:+42384134 None:intergenic
ATTTGGGGAACTTCGCTTCC+TGG 0.256187 2_3:+42384831 None:intergenic
TCTCTCTTTGCCGGGCTATC+AGG 0.263166 2_3:+42384429 None:intergenic
AACCTCATTAACATCGGATT+TGG 0.269470 2_3:+42384173 None:intergenic
TCCTTGACGTCTCTCTTTGC+CGG 0.274210 2_3:+42384420 None:intergenic
ATTTCGTAGGAGTCGGAAAA+TGG 0.284800 2_3:-42384619 Msa0292790:CDS
AGAAAACACTTTCTCCAAAA+TGG 0.300673 2_3:-42387456 Msa0292790:CDS
ACCACATTCACATCGGATTT+GGG 0.307145 2_3:+42384135 None:intergenic
GGCTGTAATTCAACTGTATC+TGG 0.309334 2_3:-42384738 Msa0292790:CDS
AACATCAACAACCAGCATAT+TGG 0.311236 2_3:+42387943 None:intergenic
TTGACAGTCATCTGAAAATA+TGG 0.314441 2_3:+42388363 None:intergenic
ACCATGCAGTTGAAAATATA+TGG 0.315669 2_3:-42389274 Msa0292790:CDS
ACCTCATTAACATCGGATTT+GGG 0.316761 2_3:+42384174 None:intergenic
TCCTTATGTGAAAGGTCATT+TGG 0.327934 2_3:-42387509 Msa0292790:CDS
CTTCAATGTCTATTGTCTCT+TGG 0.331491 2_3:+42384997 None:intergenic
AACCAATGTCACTCTCTTGC+AGG 0.335753 2_3:-42386864 Msa0292790:CDS
CTTTCCGACTGGTAAGATTC+AGG 0.339765 2_3:-42384481 Msa0292790:CDS
TCCTTCTCATCCGTTTCATC+TGG 0.345735 2_3:-42384933 Msa0292790:CDS
CATCTCCACGTGATAACATT+AGG 0.350904 2_3:-42384563 Msa0292790:CDS
CGGAAAATGGACGATAATTC+AGG 0.353749 2_3:-42384606 Msa0292790:CDS
TCTAAGAACCATGGTATGAT+AGG 0.363312 2_3:+42389209 None:intergenic
ACATCAACAACCAGCATATT+GGG 0.372605 2_3:+42387944 None:intergenic
TCAATGCAGGTTCTTGAGTT+AGG 0.375126 2_3:-42388770 Msa0292790:intron
ATGAAGCCATCAGATCTAAA+TGG 0.379168 2_3:-42387626 Msa0292790:intron
GGTCAGTAAATGCTTCTAAA+GGG 0.385901 2_3:-42384542 Msa0292790:CDS
ACAAGCCAGCCAGCAATTCC+TGG 0.385953 2_3:+42388303 None:intergenic
GATGGAAAGTCCTGCGCAAT+AGG 0.388349 2_3:+42384582 None:intergenic
TATACATATGTTTATATGTC+GGG 0.400062 2_3:+42383888 None:intergenic
GGTTGGCGTGAAGTTTGTTA+TGG 0.403419 2_3:-42384520 Msa0292790:CDS
GTTACAATCCCATGTTATGA+TGG 0.407165 2_3:+42387414 None:intergenic
AATAACAGTTCTTGATGATA+AGG 0.416703 2_3:-42386746 Msa0292790:CDS
AGAAATGGTGGCAGATAAAA+GGG 0.422355 2_3:-42384004 Msa0292790:CDS
AAATATATGGCCTATATGTA+TGG 0.428426 2_3:-42389261 Msa0292790:CDS
CAAATATCTTTACCTTGGTC+TGG 0.430139 2_3:+42387905 None:intergenic
ACAGAACTTCCAGGAATTGC+TGG 0.430424 2_3:-42388312 Msa0292790:CDS
GTGGGTTTCTTCCCAAATAT+AGG 0.432753 2_3:+42388926 None:intergenic
ATCTTATTGTTATAGAGCCT+TGG 0.437260 2_3:-42387712 Msa0292790:intron
CCTTATGTGAAAGGTCATTT+GGG 0.442994 2_3:-42387508 Msa0292790:CDS
GCAATCTGTTCCATACATAT+AGG 0.443303 2_3:+42389251 None:intergenic
TCTGTTCAGCACCTATATTT+GGG 0.444459 2_3:-42388937 Msa0292790:CDS
CTTGATGTGACAGAACTTCC+AGG 0.446186 2_3:-42388321 Msa0292790:CDS
AGGAAAGGCCTGCACAAAAT+CGG 0.446259 2_3:-42384648 Msa0292790:CDS
TCCAAACACCTGTCTTCTCT+TGG 0.447465 2_3:+42384862 None:intergenic
GCCAAGAGAAGACAGGTGTT+TGG 0.448255 2_3:-42384863 Msa0292790:CDS
CCTTGACGTCTCTCTTTGCC+GGG 0.450193 2_3:+42384421 None:intergenic
ACTGCTGCTGTCATTGTTCA+AGG 0.451580 2_3:+42384713 None:intergenic
ATTTGGGAGGATATAGATTC+AGG 0.451759 2_3:-42387492 Msa0292790:CDS
CGAACATGATAAAGAAGAAA+TGG 0.452429 2_3:-42384019 Msa0292790:CDS
AAATTTGAAATATGAATTGT+CGG 0.454393 2_3:-42383801 Msa0292790:three_prime_UTR
GTCAACAAAGCTGCATATAA+CGG 0.454586 2_3:-42388672 Msa0292790:CDS
CCCAAATGACCTTTCACATA+AGG 0.456580 2_3:+42387508 None:intergenic
ATGGGATTGTAACAATGTTC+TGG 0.457201 2_3:-42387404 Msa0292790:CDS
TCAACAAAGCTGCATATAAC+GGG 0.457469 2_3:-42388671 Msa0292790:CDS
GGATGAGAAGGAACCTTTGT+TGG 0.462679 2_3:+42384944 None:intergenic
ATGTTCTTTCTCGTAAATCA+AGG 0.468368 2_3:-42384344 Msa0292790:CDS
AGGTCAGTAAATGCTTCTAA+AGG 0.471451 2_3:-42384543 Msa0292790:CDS
AACACTGCTGGCTTTCCGAC+TGG 0.476491 2_3:-42384492 Msa0292790:CDS
CTTGTTGACCACAGTGGTGT+TGG 0.476585 2_3:+42384098 None:intergenic
GAAAACAATCTAATCAAAGA+AGG 0.477365 2_3:-42389823 Msa0292790:CDS
AACATCGAATGAAAACTGTT+AGG 0.484264 2_3:-42384668 Msa0292790:CDS
GTTTCAATCTTGCATCATGC+TGG 0.486325 2_3:-42390463 Msa0292790:CDS
ACATGCATCAACGTCGGTAT+CGG 0.486409 2_3:-42383833 Msa0292790:three_prime_UTR
AACTTCCAGGAATTGCTGGC+TGG 0.486710 2_3:-42388308 Msa0292790:CDS
ACTGGTAAGATTCAGGTAGA+AGG 0.487108 2_3:-42384474 Msa0292790:CDS
ACAACACCAACAGCACTTAG+TGG 0.487584 2_3:+42383630 None:intergenic
TTACAGCCACATATATCGTT+AGG 0.490040 2_3:+42384753 None:intergenic
TATAGAGCCTTGGTTTAAAG+TGG 0.492151 2_3:-42387702 Msa0292790:intron
TTATCTTCAGCATTATCATC+GGG 0.493511 2_3:+42384690 None:intergenic
TTTCTGATTCTGAAACAGTT+CGG 0.494262 2_3:-42389304 Msa0292790:CDS
AAATTTGCAGCCCAATATGC+TGG 0.498130 2_3:-42387954 Msa0292790:intron
CCCTCTGAATTTCTGTGTCG+AGG 0.498634 2_3:+42384778 None:intergenic
CCCCAAATCCGATGTTAATG+AGG 0.499459 2_3:-42384175 Msa0292790:CDS
TAGTAACCATTTAGATCTGA+TGG 0.506393 2_3:+42387620 None:intergenic
AGGGAGTGGTCCTGATAGCC+CGG 0.515922 2_3:-42384439 Msa0292790:CDS
CGTAAATCAAGGAAATCAAA+AGG 0.517549 2_3:-42384333 Msa0292790:CDS
TTTATCTTCAGCATTATCAT+CGG 0.518677 2_3:+42384689 None:intergenic
AACGTTATGTTACAAGGCTA+AGG 0.518852 2_3:-42389868 Msa0292790:CDS
CAAATGTGGGAGCCAAGAAA+AGG 0.519554 2_3:-42384813 Msa0292790:CDS
ATAACGGGAATGCATGTTGA+AGG 0.519584 2_3:-42388656 Msa0292790:CDS
TTTACTATAGGTCTTGGTAG+GGG 0.520785 2_3:-42388445 Msa0292790:intron
AGTTCTTGATGATAAGGAAA+AGG 0.524058 2_3:-42386740 Msa0292790:intron
AAGAACTAAAGTTGTTTCAC+AGG 0.527604 2_3:-42384223 Msa0292790:CDS
ACCTTTGATTACTGATATCA+GGG 0.529556 2_3:-42388905 Msa0292790:CDS
TCCAGATGAAACGGATGAGA+AGG 0.532280 2_3:+42384932 None:intergenic
TTTCTTGGCTCCCACATTTG+GGG 0.533313 2_3:+42384816 None:intergenic
GGTCAACAAGGAGCCTCAAA+AGG 0.533735 2_3:-42384085 Msa0292790:CDS
CTAAGAACCATGGTATGATA+GGG 0.535211 2_3:+42389210 None:intergenic
TTCATGAACGTTATGTTACA+AGG 0.536010 2_3:-42389874 Msa0292790:CDS
TTACAATCCCATGTTATGAT+GGG 0.539219 2_3:+42387415 None:intergenic
TTGACCACAGTGGTGTTGGA+TGG 0.548005 2_3:+42384102 None:intergenic
GTTATGGATGATAACACTGC+TGG 0.548074 2_3:-42384504 Msa0292790:CDS
GCCATTGCTCAAGGTAACAT+TGG 0.548679 2_3:-42384201 Msa0292790:CDS
TTATACATATGTTTATATGT+CGG 0.548793 2_3:+42383887 None:intergenic
CTCATTAACATCGGATTTGG+GGG 0.549929 2_3:+42384176 None:intergenic
TCTTAGAGAAGTACAAACCT+TGG 0.551181 2_3:-42389193 Msa0292790:CDS
TGAGAAGGAACCTTTGTTGG+TGG 0.551198 2_3:+42384947 None:intergenic
ACACGTATACGACCAAGAAA+AGG 0.551448 2_3:+42388402 None:intergenic
GTTTCACAGGCCATTGCTCA+AGG 0.552763 2_3:-42384210 Msa0292790:CDS
CTAATGTTATCACGTGGAGA+TGG 0.553752 2_3:+42384564 None:intergenic
GAAGCGAAGTTCCCCAAATG+TGG 0.562195 2_3:-42384827 Msa0292790:CDS
CCTCATTAACATCGGATTTG+GGG 0.563282 2_3:+42384175 None:intergenic
AAGGGTCTGTTCAAAAGCAA+TGG 0.563438 2_3:+42388122 None:intergenic
CTGATTCTGAAACAGTTCGG+TGG 0.563534 2_3:-42389301 Msa0292790:CDS
GTAAATGCTTCTAAAGGGGT+TGG 0.564255 2_3:-42384537 Msa0292790:CDS
AAAAGGCATTCTCCCCTGAA+AGG 0.566489 2_3:-42384068 Msa0292790:CDS
TAATTCAGGTCCTATTGCGC+AGG 0.567039 2_3:-42384592 Msa0292790:CDS
TTCTCGTCCACTTTAAACCA+AGG 0.567039 2_3:+42387695 None:intergenic
CCACATTCACATCGGATTTG+GGG 0.569763 2_3:+42384136 None:intergenic
AAATCGGTTCTGTATTTCGT+AGG 0.570323 2_3:-42384632 Msa0292790:CDS
ACCAATGTCACTCTCTTGCA+GGG 0.571591 2_3:-42386863 Msa0292790:CDS
CTGATATCAGTAATCAAAGG+TGG 0.571778 2_3:+42388907 None:intergenic
CACATTCACATCGGATTTGG+GGG 0.573608 2_3:+42384137 None:intergenic
GGTGGATCAACGGAAGGGAG+TGG 0.574578 2_3:-42384453 Msa0292790:CDS
TCAGAATTCCCATCATAACA+TGG 0.575057 2_3:-42387423 Msa0292790:CDS
CCCCAAATCCGATGTGAATG+TGG 0.579254 2_3:-42384136 Msa0292790:CDS
GTTCTGTATTTCGTAGGAGT+CGG 0.580650 2_3:-42384626 Msa0292790:CDS
CAGAATTCCCATCATAACAT+GGG 0.581021 2_3:-42387422 Msa0292790:CDS
GCAAATGAGACCACCAACAA+AGG 0.582885 2_3:-42384957 Msa0292790:CDS
ACCAATGTTACCTTGAGCAA+TGG 0.583614 2_3:+42384200 None:intergenic
AAAGAGAGACGTCAAGGACA+TGG 0.585649 2_3:-42384415 Msa0292790:CDS
GTCAGTAAATGCTTCTAAAG+GGG 0.587217 2_3:-42384541 Msa0292790:CDS
AGACTTCACTCACCTCAACA+AGG 0.587867 2_3:+42388103 None:intergenic
TTGGTTTAAAGTGGACGAGA+AGG 0.592908 2_3:-42387693 Msa0292790:CDS
ATTGAAGGCCAAGAGAAGAC+AGG 0.595022 2_3:-42384870 Msa0292790:CDS
GGGAATGCATGTTGAAGGGA+AGG 0.595088 2_3:-42388651 Msa0292790:intron
GGGTGAAGTTCCTCAAGGAA+TGG 0.596250 2_3:-42388425 Msa0292790:CDS
AAAACAATCTAATCAAAGAA+GGG 0.596262 2_3:-42389822 Msa0292790:intron
GTAGAAGGTGGATCAACGGA+AGG 0.599566 2_3:-42384459 Msa0292790:CDS
CAACACCACTGTGGTCAACA+AGG 0.602995 2_3:-42384097 Msa0292790:CDS
GAGCTGTGTTCGATATCTGT+CGG 0.603441 2_3:+42383910 None:intergenic
GCCTCGACACAGAAATTCAG+AGG 0.603945 2_3:-42384779 Msa0292790:CDS
TAAACTTGTTTATGAAAACA+AGG 0.609122 2_3:+42383655 None:intergenic
TCAGGTAGAAGGTGGATCAA+CGG 0.609378 2_3:-42384463 Msa0292790:CDS
CGAATGAAAACTGTTAGGAA+AGG 0.609904 2_3:-42384663 Msa0292790:CDS
ATGAATCATACAGCAGTCCA+AGG 0.611982 2_3:+42389176 None:intergenic
GGTAAGATTCAGGTAGAAGG+TGG 0.612543 2_3:-42384471 Msa0292790:CDS
TCCCTGCAAGAGAGTGACAT+TGG 0.612837 2_3:+42386862 None:intergenic
ATGACCTTTCACATAAGGAT+CGG 0.615098 2_3:+42387513 None:intergenic
TTAGCCGATCCTTATGTGAA+AGG 0.615463 2_3:-42387517 Msa0292790:CDS
CAAGAAAAGGCCATTCCTTG+AGG 0.616347 2_3:+42388415 None:intergenic
AGGGAACCTAACGATATATG+TGG 0.618706 2_3:-42384759 Msa0292790:CDS
TATGTGAAAGGTCATTTGGG+AGG 0.619001 2_3:-42387505 Msa0292790:CDS
TAACGGGAATGCATGTTGAA+GGG 0.621171 2_3:-42388655 Msa0292790:CDS
CCCGGCAAAGAGAGACGTCA+AGG 0.621860 2_3:-42384421 Msa0292790:CDS
TTTATGCCACTAAGTGCTGT+TGG 0.622596 2_3:-42383636 Msa0292790:three_prime_UTR
GGTGTTTGGATACATCAGCC+AGG 0.623254 2_3:-42384849 Msa0292790:CDS
ACCCTGATATCAGTAATCAA+AGG 0.627115 2_3:+42388904 None:intergenic
AAGCGAAGTTCCCCAAATGT+GGG 0.628739 2_3:-42384826 Msa0292790:CDS
CCAGTGTGATGATGACCACT+TGG 0.631960 2_3:-42388875 Msa0292790:intron
ACTTTCTCCAAAATGGCAAG+AGG 0.641409 2_3:-42387449 Msa0292790:CDS
TGATATCAGTAATCAAAGGT+GGG 0.644175 2_3:+42388908 None:intergenic
TTGTACTTCTCTAAGAACCA+TGG 0.644582 2_3:+42389200 None:intergenic
GACTTCACTCACCTCAACAA+GGG 0.645139 2_3:+42388104 None:intergenic
ATTGTGAACCTCATTAACAT+CGG 0.648603 2_3:+42384167 None:intergenic
GGTAGGGGTGAAGTTCCTCA+AGG 0.658397 2_3:-42388430 Msa0292790:CDS
TAGAAGGTGGATCAACGGAA+GGG 0.663587 2_3:-42384458 Msa0292790:CDS
TCTACCTGAATCTTACCAGT+CGG 0.664384 2_3:+42384477 None:intergenic
ACATGATAAAGAAGAAATGG+TGG 0.668596 2_3:-42384016 Msa0292790:CDS
ACAGTCATCTGAAAATATGG+AGG 0.673844 2_3:+42388366 None:intergenic
CCAAGTGGTCATCATCACAC+TGG 0.674932 2_3:+42388875 None:intergenic
AGGCTCCTTGTTGACCACAG+TGG 0.684496 2_3:+42384092 None:intergenic
ATTGTGAACCACATTCACAT+CGG 0.691176 2_3:+42384128 None:intergenic
CCTCGACACAGAAATTCAGA+GGG 0.702383 2_3:-42384778 Msa0292790:CDS
AAACAGAGCGTTAACAAACG+AGG 0.703478 2_3:+42390910 None:intergenic
AAATTTGTATCACCAGACCA+AGG 0.724755 2_3:-42387917 Msa0292790:intron
ACTGACCTAATGTTATCACG+TGG 0.727696 2_3:+42384558 None:intergenic
GTAGCTACATGCATCAACGT+CGG 0.739961 2_3:-42383839 Msa0292790:three_prime_UTR
TGTGCCATCCAACACCACTG+TGG 0.765001 2_3:-42384106 Msa0292790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCAAATTTTAATCAAA+TGG - chr2_3:42383908-42383927 Msa0292790:three_prime_UTR 10.0%
!!! ATATCAAATTTTAATCAAAT+GGG - chr2_3:42383909-42383928 Msa0292790:three_prime_UTR 10.0%
!!! ATATGCTTTTTTTTTTTTTA+TGG - chr2_3:42384245-42384264 Msa0292790:CDS 10.0%
!!! TTTTTTTGTCTTATTTATAA+AGG - chr2_3:42384504-42384523 Msa0292790:CDS 10.0%
!!! TTTTTTGTCTTATTTATAAA+GGG - chr2_3:42384505-42384524 Msa0292790:CDS 10.0%
!!! TTTATATTTGTTTTTACTAT+AGG - chr2_3:42386032-42386051 Msa0292790:intron 10.0%
!!! AATGATATCTAAAATAAAAT+TGG + chr2_3:42388414-42388433 None:intergenic 10.0%
!!! AATTTTATTTTAGATATCAT+TGG - chr2_3:42388413-42388432 Msa0292790:CDS 10.0%
!! TATTTACAATGAAAATAAAA+TGG - chr2_3:42389299-42389318 Msa0292790:CDS 10.0%
!!! TTATATGTTATGTTATATTT+TGG - chr2_3:42390760-42390779 Msa0292790:intron 10.0%
!! TGAATAGTAAAATATTGAAA+GGG + chr2_3:42383711-42383730 None:intergenic 15.0%
!! TTGAATAGTAAAATATTGAA+AGG + chr2_3:42383712-42383731 None:intergenic 15.0%
!! AAATTAAATGTGTGTAATTA+GGG + chr2_3:42383844-42383863 None:intergenic 15.0%
!! TAAATTAAATGTGTGTAATT+AGG + chr2_3:42383845-42383864 None:intergenic 15.0%
!!! TAATTACACACATTTAATTT+AGG - chr2_3:42383844-42383863 Msa0292790:three_prime_UTR 15.0%
!!! AATTACACACATTTAATTTA+GGG - chr2_3:42383845-42383864 Msa0292790:three_prime_UTR 15.0%
!! GATATTTAATCAAAAAAACA+CGG + chr2_3:42383894-42383913 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTATGGTT+TGG - chr2_3:42384250-42384269 Msa0292790:CDS 15.0%
!! TGAACAATTAAAAATATAAC+AGG + chr2_3:42386516-42386535 None:intergenic 15.0%
!!! ATTCAAAGATTTGTTTAATA+AGG + chr2_3:42386686-42386705 None:intergenic 15.0%
!! AACAAATTATAGTATATTTC+AGG - chr2_3:42386948-42386967 Msa0292790:intron 15.0%
!! AATACAATATAGAAATAAGA+GGG + chr2_3:42387928-42387947 None:intergenic 15.0%
!! AAAAATAAAATATATGTAGC+TGG - chr2_3:42388454-42388473 Msa0292790:intron 15.0%
!! ATATTTATTATTATGGTCAA+TGG + chr2_3:42388522-42388541 None:intergenic 15.0%
!!! TCTTTTTGTTTCTAAAAATT+GGG + chr2_3:42388983-42389002 None:intergenic 15.0%
!!! TTCTTTTTGTTTCTAAAAAT+TGG + chr2_3:42388984-42389003 None:intergenic 15.0%
!!! AAAGAATATTTTCAAAAATG+CGG - chr2_3:42390098-42390117 Msa0292790:intron 15.0%
!! TTATACATATGTTTATATGT+CGG + chr2_3:42390605-42390624 None:intergenic 15.0%
!! ATATGTATAATTTGAGAAAA+TGG - chr2_3:42390615-42390634 Msa0292790:intron 15.0%
!!! AAATTTGAAATATGAATTGT+CGG - chr2_3:42390688-42390707 Msa0292790:intron 15.0%
!! GAATAGTAAAATATTGAAAG+GGG + chr2_3:42383710-42383729 None:intergenic 20.0%
!!! ATTACACACATTTAATTTAG+GGG - chr2_3:42383846-42383865 Msa0292790:three_prime_UTR 20.0%
!!! TTCTTCAGTTTTTGTTATAA+TGG - chr2_3:42383992-42384011 Msa0292790:CDS 20.0%
!! AAAACAATCTAATCAAAGAA+GGG - chr2_3:42384667-42384686 Msa0292790:CDS 20.0%
!!! ATAAGGTTTCTATTGATTAA+AGG - chr2_3:42384820-42384839 Msa0292790:CDS 20.0%
!!! TCTATTGATTAAAGGATAAA+AGG - chr2_3:42384828-42384847 Msa0292790:CDS 20.0%
!! GTTATGATGATTTACTAATA+TGG - chr2_3:42385104-42385123 Msa0292790:intron 20.0%
!!! TTTTCTTTATCATTGTCTTT+AGG - chr2_3:42385159-42385178 Msa0292790:intron 20.0%
!! AATATATGAAAGGAACAAAA+AGG + chr2_3:42385433-42385452 None:intergenic 20.0%
!! TTTGTTCCTTTCATATATTA+TGG - chr2_3:42385434-42385453 Msa0292790:intron 20.0%
!! AAGAAACCATAATATATGAA+AGG + chr2_3:42385443-42385462 None:intergenic 20.0%
!!! AAATATTCTTTTGCTGATTA+AGG - chr2_3:42385915-42385934 Msa0292790:intron 20.0%
!!! TCAATGACTAATGATTTTAA+CGG + chr2_3:42386630-42386649 None:intergenic 20.0%
!! CTCTATAACAATAAGATTTA+TGG + chr2_3:42386774-42386793 None:intergenic 20.0%
!!! AATATATTTTCACTAGATGT+CGG - chr2_3:42387333-42387352 Msa0292790:intron 20.0%
!! AAAGCAAATGTATATTAACA+AGG + chr2_3:42387389-42387408 None:intergenic 20.0%
!! ATATACAAGTTTCACATTAT+TGG + chr2_3:42387828-42387847 None:intergenic 20.0%
!! GAATACAATATAGAAATAAG+AGG + chr2_3:42387929-42387948 None:intergenic 20.0%
!! ATATTATAACTTCTAGATTC+AGG - chr2_3:42388083-42388102 Msa0292790:intron 20.0%
!!! TTTTAATAGTTGGGAATTAA+GGG + chr2_3:42388154-42388173 None:intergenic 20.0%
!!! TTGTGTTTGTTTTAATAGTT+GGG + chr2_3:42388163-42388182 None:intergenic 20.0%
!!! ATAAGTACATATGTTTGTTT+TGG + chr2_3:42388549-42388568 None:intergenic 20.0%
!! AACAATAGATCAAATAACAA+AGG + chr2_3:42389418-42389437 None:intergenic 20.0%
!!! CAATTTTGAATTATGTTTAC+AGG - chr2_3:42389450-42389469 Msa0292790:intron 20.0%
!! AATGAAAAAATTGTTATGTC+TGG - chr2_3:42390447-42390466 Msa0292790:CDS 20.0%
!! TATACATATGTTTATATGTC+GGG + chr2_3:42390604-42390623 None:intergenic 20.0%
!!! TTATGTTATATTTTGGTCAA+TGG - chr2_3:42390767-42390786 Msa0292790:intron 20.0%
!!! TAAACTTGTTTATGAAAACA+AGG + chr2_3:42390837-42390856 None:intergenic 20.0%
!!! ATGGATTGAGTTGAATAATT+GGG + chr2_3:42383642-42383661 None:intergenic 25.0%
!!! AATGGATTGAGTTGAATAAT+TGG + chr2_3:42383643-42383662 None:intergenic 25.0%
! AAGATTAATTGAAGTGGAAA+TGG + chr2_3:42383775-42383794 None:intergenic 25.0%
! AAGTCAAAGATTAATTGAAG+TGG + chr2_3:42383781-42383800 None:intergenic 25.0%
! ACTACTCATTAAATTTCACT+TGG - chr2_3:42383966-42383985 Msa0292790:exon 25.0%
! CTACTCATTAAATTTCACTT+GGG - chr2_3:42383967-42383986 Msa0292790:exon 25.0%
!!! TATGCTATGCTTTTTGATTT+TGG - chr2_3:42384195-42384214 Msa0292790:CDS 25.0%
!! TGGATCTATAATTTGTAGTT+TGG - chr2_3:42384471-42384490 Msa0292790:CDS 25.0%
! TTATAAAGGGTAAAGAGAAA+AGG - chr2_3:42384518-42384537 Msa0292790:CDS 25.0%
! TATAAAGGGTAAAGAGAAAA+GGG - chr2_3:42384519-42384538 Msa0292790:CDS 25.0%
! TAACCAAAAAAGGAAAGAAA+AGG - chr2_3:42384545-42384564 Msa0292790:CDS 25.0%
! AACCAAAAAAGGAAAGAAAA+GGG - chr2_3:42384546-42384565 Msa0292790:CDS 25.0%
!!! TTTGTTCTTTTTCTTTGGAA+AGG - chr2_3:42384592-42384611 Msa0292790:CDS 25.0%
! GAAAACAATCTAATCAAAGA+AGG - chr2_3:42384666-42384685 Msa0292790:CDS 25.0%
! AAATATATGGCCTATATGTA+TGG - chr2_3:42385228-42385247 Msa0292790:intron 25.0%
! GTCAAAGATAAATAACTGAA+AGG + chr2_3:42385342-42385361 None:intergenic 25.0%
! GAAAATGTTTGAACTTCATA+TGG + chr2_3:42385379-42385398 None:intergenic 25.0%
! TGTGAAACTAAGAAAAAGAT+TGG - chr2_3:42385784-42385803 Msa0292790:intron 25.0%
! GTGAAACTAAGAAAAAGATT+GGG - chr2_3:42385785-42385804 Msa0292790:intron 25.0%
!! GAATTTCAATTTTACCTAGA+CGG - chr2_3:42385871-42385890 Msa0292790:intron 25.0%
!!! TTTGTTTTTACTATAGGTCT+TGG - chr2_3:42386038-42386057 Msa0292790:intron 25.0%
!!! TCAAACCTATTTTTACACAT+GGG - chr2_3:42386145-42386164 Msa0292790:intron 25.0%
! AATCATTAGTCATTGAACAA+AGG - chr2_3:42386634-42386653 Msa0292790:intron 25.0%
! TTTAATAAGGATTCTAGTGA+GGG + chr2_3:42386673-42386692 None:intergenic 25.0%
! AAAAATATCATCACAGAGAA+AGG + chr2_3:42386897-42386916 None:intergenic 25.0%
! ACTATACTAAAAACCACATA+AGG + chr2_3:42387189-42387208 None:intergenic 25.0%
!!! TGGTTTTTAGTATAGTTCAA+TGG - chr2_3:42387193-42387212 Msa0292790:intron 25.0%
! TTAAAATTAGCAGTATGAGA+TGG + chr2_3:42387279-42387298 None:intergenic 25.0%
! AAACACAGTGATTGAATAAT+TGG + chr2_3:42387596-42387615 None:intergenic 25.0%
!! TGTGAACATCAATGATTTTA+GGG - chr2_3:42387656-42387675 Msa0292790:CDS 25.0%
!! AATAACAGTTCTTGATGATA+AGG - chr2_3:42387743-42387762 Msa0292790:intron 25.0%
! GAATGAATATAATTGAGGTA+AGG + chr2_3:42387792-42387811 None:intergenic 25.0%
! TATTATGTGAAAGTTGTAGA+TGG + chr2_3:42387980-42387999 None:intergenic 25.0%
!!! GTTTTAATAGTTGGGAATTA+AGG + chr2_3:42388155-42388174 None:intergenic 25.0%
!!! GTTGTGTTTGTTTTAATAGT+TGG + chr2_3:42388164-42388183 None:intergenic 25.0%
! AGATTGAATATCGTGAAAAA+AGG + chr2_3:42388368-42388387 None:intergenic 25.0%
! ATGATGTTGTAAGATATTGT+AGG + chr2_3:42388815-42388834 None:intergenic 25.0%
! AAAGAATGTACTTGTTTGAT+TGG + chr2_3:42388850-42388869 None:intergenic 25.0%
! TGATTTCGATGAAAAGAAAT+AGG + chr2_3:42388902-42388921 None:intergenic 25.0%
! TCGAAATCAAATGAAAAGAA+AGG - chr2_3:42388913-42388932 Msa0292790:CDS 25.0%
! ATCAAATGAAAAGAAAGGAA+AGG - chr2_3:42388918-42388937 Msa0292790:CDS 25.0%
! AGAATAATAAGTGGAACAAA+AGG - chr2_3:42388941-42388960 Msa0292790:CDS 25.0%
! TATGAGCCAATAAAAATTGA+AGG - chr2_3:42389604-42389623 Msa0292790:intron 25.0%
! TTTATCTTCAGCATTATCAT+CGG + chr2_3:42389803-42389822 None:intergenic 25.0%
!!! TTTTTTCATTAGACCTTTCA+GGG + chr2_3:42390437-42390456 None:intergenic 25.0%
!!! ATTTTTTCATTAGACCTTTC+AGG + chr2_3:42390438-42390457 None:intergenic 25.0%
!!! ATGTAGAGTACTTTTTGTTT+TGG - chr2_3:42390794-42390813 Msa0292790:intron 25.0%
!!! TTTTTGTTTTGGTGTAAAGT+AGG - chr2_3:42390805-42390824 Msa0292790:intron 25.0%
!!! TTTTGTTTTGGTGTAAAGTA+GGG - chr2_3:42390806-42390825 Msa0292790:intron 25.0%
AATAATTGGGAAGAGTGAAA+CGG + chr2_3:42383629-42383648 None:intergenic 30.0%
AATTAGGGTTTACAAGGAAA+TGG + chr2_3:42383661-42383680 None:intergenic 30.0%
!! GTGATAAAGTGTTGCAATTA+GGG + chr2_3:42383676-42383695 None:intergenic 30.0%
TAAAATATTGAAAGGGGAGA+AGG + chr2_3:42383704-42383723 None:intergenic 30.0%
TAATTGAAGTGGAAATGGTT+TGG + chr2_3:42383770-42383789 None:intergenic 30.0%
!!! GAATCGTTTTGATTTCTCTA+TGG - chr2_3:42384048-42384067 Msa0292790:CDS 30.0%
!!! TCATGCTGCTTTTTATTTTG+TGG - chr2_3:42384094-42384113 Msa0292790:CDS 30.0%
! TATGGTTTGGATTCATTAGT+TGG - chr2_3:42384263-42384282 Msa0292790:CDS 30.0%
GCTAAACTTTACTTAGTAAC+CGG + chr2_3:42384350-42384369 None:intergenic 30.0%
!!! ATTAGTTGGTGGTTTTGTAA+CGG - chr2_3:42384416-42384435 Msa0292790:CDS 30.0%
AAAAGGGTTGTAACCAAAAA+AGG - chr2_3:42384535-42384554 Msa0292790:CDS 30.0%
! TACCCTTTTCTTTCCTTTTT+TGG + chr2_3:42384551-42384570 None:intergenic 30.0%
! CTGACTTTGTTCTTTTTCTT+TGG - chr2_3:42384587-42384606 Msa0292790:CDS 30.0%
TTCATGAACGTTATGTTACA+AGG - chr2_3:42384615-42384634 Msa0292790:CDS 30.0%
AAATAGAATCTGAACTTGAG+TGG - chr2_3:42384726-42384745 Msa0292790:CDS 30.0%
TCAAAACACATGAAAAGGAA+GGG + chr2_3:42384782-42384801 None:intergenic 30.0%
TTCAAAACACATGAAAAGGA+AGG + chr2_3:42384783-42384802 None:intergenic 30.0%
!! TCCTTTTCATGTGTTTTGAA+TGG - chr2_3:42384783-42384802 Msa0292790:CDS 30.0%
TCCATTCAAAACACATGAAA+AGG + chr2_3:42384787-42384806 None:intergenic 30.0%
TGGATTATTGCTTGTCAATA+AGG - chr2_3:42384803-42384822 Msa0292790:CDS 30.0%
TTAGAACATGTTTGCATTCA+CGG + chr2_3:42384987-42385006 None:intergenic 30.0%
ATCATTGTCTTGAGAGTTAT+TGG - chr2_3:42385051-42385070 Msa0292790:intron 30.0%
TCATTGTCTTGAGAGTTATT+GGG - chr2_3:42385052-42385071 Msa0292790:intron 30.0%
ACTAATATGGCCTATATGTA+TGG - chr2_3:42385117-42385136 Msa0292790:intron 30.0%
!! TTTCTGATTCTGAAACAGTT+CGG - chr2_3:42385185-42385204 Msa0292790:intron 30.0%
ACCATGCAGTTGAAAATATA+TGG - chr2_3:42385215-42385234 Msa0292790:intron 30.0%
TGAAAGGAACAAAAAGGAAA+AGG + chr2_3:42385427-42385446 None:intergenic 30.0%
CTGATCATACACAAAATCAA+AGG + chr2_3:42385494-42385513 None:intergenic 30.0%
TGATATCAGTAATCAAAGGT+GGG + chr2_3:42385584-42385603 None:intergenic 30.0%
ACCTTTGATTACTGATATCA+GGG - chr2_3:42385584-42385603 Msa0292790:intron 30.0%
TAAGAATGTTACATACCAAG+TGG + chr2_3:42385632-42385651 None:intergenic 30.0%
ATGTAACATTCTTAAGCAGA+AGG - chr2_3:42385638-42385657 Msa0292790:intron 30.0%
! GTTAGGAATGAATTTTCTCA+CGG - chr2_3:42385736-42385755 Msa0292790:intron 30.0%
! TTAGGAATGAATTTTCTCAC+GGG - chr2_3:42385737-42385756 Msa0292790:intron 30.0%
!! ATTCTTTTGCTGATTAAGGT+CGG - chr2_3:42385919-42385938 Msa0292790:intron 30.0%
! TTTTTACTATAGGTCTTGGT+AGG - chr2_3:42386042-42386061 Msa0292790:intron 30.0%
! TTTTACTATAGGTCTTGGTA+GGG - chr2_3:42386043-42386062 Msa0292790:intron 30.0%
TTGACAGTCATCTGAAAATA+TGG + chr2_3:42386129-42386148 None:intergenic 30.0%
!!! GTCAAACCTATTTTTACACA+TGG - chr2_3:42386144-42386163 Msa0292790:intron 30.0%
! AAATTACTTGATTCGAGAGA+AGG + chr2_3:42386305-42386324 None:intergenic 30.0%
CATGACAAATATCTTTACCT+TGG + chr2_3:42386592-42386611 None:intergenic 30.0%
GTTTAATAAGGATTCTAGTG+AGG + chr2_3:42386674-42386693 None:intergenic 30.0%
GTAACAATTATGTCAAGCAT+GGG + chr2_3:42386724-42386743 None:intergenic 30.0%
TGTAACAATTATGTCAAGCA+TGG + chr2_3:42386725-42386744 None:intergenic 30.0%
ATCTTATTGTTATAGAGCCT+TGG - chr2_3:42386777-42386796 Msa0292790:CDS 30.0%
TGCAAAAATCGAAATTGTTG+AGG - chr2_3:42386832-42386851 Msa0292790:CDS 30.0%
TAGTAACCATTTAGATCTGA+TGG + chr2_3:42386872-42386891 None:intergenic 30.0%
AGAAAACACTTTCTCCAAAA+TGG - chr2_3:42387033-42387052 Msa0292790:intron 30.0%
TTACAATCCCATGTTATGAT+GGG + chr2_3:42387077-42387096 None:intergenic 30.0%
ATTTCTATGATGACATCCTT+GGG - chr2_3:42387132-42387151 Msa0292790:intron 30.0%
! ACTTTGAACTTTTCCTTATG+TGG - chr2_3:42387173-42387192 Msa0292790:intron 30.0%
GAAACATGATAGTTTCTCAT+TGG + chr2_3:42387257-42387276 None:intergenic 30.0%
TTAAACTACCTGTACAATAG+TGG - chr2_3:42387295-42387314 Msa0292790:intron 30.0%
TAAACTACCTGTACAATAGT+GGG - chr2_3:42387296-42387315 Msa0292790:intron 30.0%
CTTCATGATAATAGCAGAAA+AGG + chr2_3:42387462-42387481 None:intergenic 30.0%
ACAGTGATTGAATAATTGGA+AGG + chr2_3:42387592-42387611 None:intergenic 30.0%
! CTGTGAACATCAATGATTTT+AGG - chr2_3:42387655-42387674 Msa0292790:CDS 30.0%
!! AACATCAATGATTTTAGGGA+CGG - chr2_3:42387660-42387679 Msa0292790:CDS 30.0%
! AGTTCTTGATGATAAGGAAA+AGG - chr2_3:42387749-42387768 Msa0292790:intron 30.0%
AATATAATTGAGGTAAGGTG+GGG + chr2_3:42387787-42387806 None:intergenic 30.0%
GAATATAATTGAGGTAAGGT+GGG + chr2_3:42387788-42387807 None:intergenic 30.0%
TGAATATAATTGAGGTAAGG+TGG + chr2_3:42387789-42387808 None:intergenic 30.0%
CATTATTGGATAATATTGCG+AGG + chr2_3:42387814-42387833 None:intergenic 30.0%
ATGTTGAGGAATCAACATAT+AGG + chr2_3:42387867-42387886 None:intergenic 30.0%
ATAGAAATAAGAGGGATTGT+AGG + chr2_3:42387920-42387939 None:intergenic 30.0%
! ATCTGGAAGTGTATAGAAAA+GGG + chr2_3:42387953-42387972 None:intergenic 30.0%
! AATCTGGAAGTGTATAGAAA+AGG + chr2_3:42387954-42387973 None:intergenic 30.0%
AAGTTGTAGATGGTATAATC+TGG + chr2_3:42387970-42387989 None:intergenic 30.0%
TGAGTGTTAAAATGTGTGTT+CGG + chr2_3:42388124-42388143 None:intergenic 30.0%
ATAAAGATCTCCAAAACGAT+TGG + chr2_3:42388276-42388295 None:intergenic 30.0%
GGAGATCTTTATGTATTAAC+AGG - chr2_3:42388284-42388303 Msa0292790:intron 30.0%
!! CAATGCAACAATGTTTTTGA+AGG + chr2_3:42388332-42388351 None:intergenic 30.0%
GTCAATTTCATTCTTGACAA+CGG + chr2_3:42388637-42388656 None:intergenic 30.0%
! AAATTGACTTAGTACAAGAG+AGG - chr2_3:42388649-42388668 Msa0292790:intron 30.0%
! AATTGACTTAGTACAAGAGA+GGG - chr2_3:42388650-42388669 Msa0292790:intron 30.0%
AAGGAAAGGAGAATAATAAG+TGG - chr2_3:42388932-42388951 Msa0292790:CDS 30.0%
ATCTGGAAAATCTCCAAAAT+TGG - chr2_3:42389573-42389592 Msa0292790:intron 30.0%
! TCATAGTTATCTGCCAATTT+TGG + chr2_3:42389589-42389608 None:intergenic 30.0%
!! TCTTGGCCTTCAATTTTTAT+TGG + chr2_3:42389613-42389632 None:intergenic 30.0%
TTATCTTCAGCATTATCATC+GGG + chr2_3:42389802-42389821 None:intergenic 30.0%
AACATCGAATGAAAACTGTT+AGG - chr2_3:42389821-42389840 Msa0292790:intron 30.0%
ATGTTCTTTCTCGTAAATCA+AGG - chr2_3:42390145-42390164 Msa0292790:intron 30.0%
CGTAAATCAAGGAAATCAAA+AGG - chr2_3:42390156-42390175 Msa0292790:intron 30.0%
!!! TTTAGTTCTTGCATCTTTTG+GGG + chr2_3:42390256-42390275 None:intergenic 30.0%
!!! CTTTAGTTCTTGCATCTTTT+GGG + chr2_3:42390257-42390276 None:intergenic 30.0%
!!! ACTTTAGTTCTTGCATCTTT+TGG + chr2_3:42390258-42390277 None:intergenic 30.0%
! AAGAACTAAAGTTGTTTCAC+AGG - chr2_3:42390266-42390285 Msa0292790:intron 30.0%
ATTGTGAACCTCATTAACAT+CGG + chr2_3:42390325-42390344 None:intergenic 30.0%
! TTTTTCATTAGACCTTTCAG+GGG + chr2_3:42390436-42390455 None:intergenic 30.0%
CGAACATGATAAAGAAGAAA+TGG - chr2_3:42390470-42390489 Msa0292790:CDS 30.0%
ACATGATAAAGAAGAAATGG+TGG - chr2_3:42390473-42390492 Msa0292790:CDS 30.0%
!! AACAAAAAGTACTCTACATG+TGG + chr2_3:42390793-42390812 None:intergenic 30.0%
TGTTGCAATTAGGGTTTACA+AGG + chr2_3:42383667-42383686 None:intergenic 35.0%
!! GGTGATAAAGTGTTGCAATT+AGG + chr2_3:42383677-42383696 None:intergenic 35.0%
! AAGTGGAAATGGTTTGGATA+TGG + chr2_3:42383764-42383783 None:intergenic 35.0%
!!! TTCATTCCTTTTTTCGCAAG+TGG - chr2_3:42383812-42383831 Msa0292790:three_prime_UTR 35.0%
!!! TCATTCCTTTTTTCGCAAGT+GGG - chr2_3:42383813-42383832 Msa0292790:three_prime_UTR 35.0%
! GGCTTTGATCTATCTTTATC+TGG - chr2_3:42384115-42384134 Msa0292790:CDS 35.0%
TGATCTATCTTTATCTGGTG+AGG - chr2_3:42384120-42384139 Msa0292790:CDS 35.0%
!! GGTTTCTGCTTTTGAACTTT+TGG - chr2_3:42384156-42384175 Msa0292790:CDS 35.0%
TTCCATCCAAAAATCGAACT+CGG - chr2_3:42384383-42384402 Msa0292790:CDS 35.0%
AACGTTATGTTACAAGGCTA+AGG - chr2_3:42384621-42384640 Msa0292790:CDS 35.0%
CAAAACACATGAAAAGGAAG+GGG + chr2_3:42384781-42384800 None:intergenic 35.0%
GTGAATGCAAACATGTTCTA+AGG - chr2_3:42384986-42385005 Msa0292790:CDS 35.0%
CATTGTCTTGAGAGTTATTG+GGG - chr2_3:42385053-42385072 Msa0292790:intron 35.0%
GCAATCTGTTCCATACATAT+AGG + chr2_3:42385130-42385149 None:intergenic 35.0%
! GCCATATATTTTCAACTGCA+TGG + chr2_3:42385219-42385238 None:intergenic 35.0%
GCAATCTGTTCCATACATAT+AGG + chr2_3:42385130-42385149 None:intergenic 35.0%
! TTTTACTCCCTATCATACCA+TGG - chr2_3:42385272-42385291 Msa0292790:intron 35.0%
CTAAGAACCATGGTATGATA+GGG + chr2_3:42385282-42385301 None:intergenic 35.0%
TCTAAGAACCATGGTATGAT+AGG + chr2_3:42385283-42385302 None:intergenic 35.0%
! TTGTACTTCTCTAAGAACCA+TGG + chr2_3:42385292-42385311 None:intergenic 35.0%
! TCTTAGAGAAGTACAAACCT+TGG - chr2_3:42385296-42385315 Msa0292790:intron 35.0%
GGAACAAAAAGGAAAAGGAA+TGG + chr2_3:42385422-42385441 None:intergenic 35.0%
TTCTGTTCAGCACCTATATT+TGG - chr2_3:42385551-42385570 Msa0292790:intron 35.0%
TCTGTTCAGCACCTATATTT+GGG - chr2_3:42385552-42385571 Msa0292790:intron 35.0%
CTGATATCAGTAATCAAAGG+TGG + chr2_3:42385585-42385604 None:intergenic 35.0%
CACCTTTGATTACTGATATC+AGG - chr2_3:42385583-42385602 Msa0292790:intron 35.0%
ACCCTGATATCAGTAATCAA+AGG + chr2_3:42385588-42385607 None:intergenic 35.0%
CTAAGAAAAAGATTGGGCTT+TGG - chr2_3:42385791-42385810 Msa0292790:intron 35.0%
GTCAACAAAGCTGCATATAA+CGG - chr2_3:42385817-42385836 Msa0292790:intron 35.0%
TCAACAAAGCTGCATATAAC+GGG - chr2_3:42385818-42385837 Msa0292790:intron 35.0%
CATATACAACAAATCCGTCT+AGG + chr2_3:42385888-42385907 None:intergenic 35.0%
TTTACTATAGGTCTTGGTAG+GGG - chr2_3:42386044-42386063 Msa0292790:intron 35.0%
ACAGTCATCTGAAAATATGG+AGG + chr2_3:42386126-42386145 None:intergenic 35.0%
TCAAGCCCATGTGTAAAAAT+AGG + chr2_3:42386153-42386172 None:intergenic 35.0%
ACATCAACAACCAGCATATT+GGG + chr2_3:42386548-42386567 None:intergenic 35.0%
AACATCAACAACCAGCATAT+TGG + chr2_3:42386549-42386568 None:intergenic 35.0%
AAATTTGTATCACCAGACCA+AGG - chr2_3:42386572-42386591 Msa0292790:intron 35.0%
CAAATATCTTTACCTTGGTC+TGG + chr2_3:42386587-42386606 None:intergenic 35.0%
TATAGAGCCTTGGTTTAAAG+TGG - chr2_3:42386787-42386806 Msa0292790:CDS 35.0%
! TCGATTTTTGCATAAGCAAC+AGG + chr2_3:42386824-42386843 None:intergenic 35.0%
ATGAAGCCATCAGATCTAAA+TGG - chr2_3:42386863-42386882 Msa0292790:CDS 35.0%
ATGACCTTTCACATAAGGAT+CGG + chr2_3:42386979-42386998 None:intergenic 35.0%
TCCTTATGTGAAAGGTCATT+TGG - chr2_3:42386980-42386999 Msa0292790:intron 35.0%
CCTTATGTGAAAGGTCATTT+GGG - chr2_3:42386981-42387000 Msa0292790:intron 35.0%
ATTTGGGAGGATATAGATTC+AGG - chr2_3:42386997-42387016 Msa0292790:intron 35.0%
TCAGAATTCCCATCATAACA+TGG - chr2_3:42387066-42387085 Msa0292790:intron 35.0%
CAGAATTCCCATCATAACAT+GGG - chr2_3:42387067-42387086 Msa0292790:intron 35.0%
GTTACAATCCCATGTTATGA+TGG + chr2_3:42387078-42387097 None:intergenic 35.0%
ATGGGATTGTAACAATGTTC+TGG - chr2_3:42387085-42387104 Msa0292790:intron 35.0%
CAAGGATGTCATCATAGAAA+TGG + chr2_3:42387133-42387152 None:intergenic 35.0%
CATTTCTATGATGACATCCT+TGG - chr2_3:42387131-42387150 Msa0292790:intron 35.0%
AAGTTCAAAGTTCAGACAGA+CGG + chr2_3:42387164-42387183 None:intergenic 35.0%
ATGATAATAGCAGAAAAGGC+AGG + chr2_3:42387458-42387477 None:intergenic 35.0%
! CAAACAAAGTGCTAGAGAAA+AGG + chr2_3:42387522-42387541 None:intergenic 35.0%
! CTTTTCTCTAGCACTTTGTT+TGG - chr2_3:42387520-42387539 Msa0292790:CDS 35.0%
!! ACATCAATGATTTTAGGGAC+GGG - chr2_3:42387661-42387680 Msa0292790:CDS 35.0%
ACGGGCAAAAATATGATAAG+TGG - chr2_3:42387679-42387698 Msa0292790:CDS 35.0%
CGGGCAAAAATATGATAAGT+GGG - chr2_3:42387680-42387699 Msa0292790:CDS 35.0%
CCACTACAGAGAGTAAAAAT+GGG - chr2_3:42387705-42387724 Msa0292790:intron 35.0%
CACTACAGAGAGTAAAAATG+GGG - chr2_3:42387706-42387725 Msa0292790:intron 35.0%
ATATAATTGAGGTAAGGTGG+GGG + chr2_3:42387786-42387805 None:intergenic 35.0%
GCGAGGAATGAATATAATTG+AGG + chr2_3:42387797-42387816 None:intergenic 35.0%
! GAGGCACTATTATACTTATG+TGG + chr2_3:42387898-42387917 None:intergenic 35.0%
GAGTGTTAAAATGTGTGTTC+GGG + chr2_3:42388123-42388142 None:intergenic 35.0%
TAATAGTTGGGAATTAAGGG+CGG + chr2_3:42388151-42388170 None:intergenic 35.0%
!! TGGCTCTTTTTCATTTTGTG+TGG + chr2_3:42388256-42388275 None:intergenic 35.0%
! TGAAAAAGAGCCAATCGTTT+TGG - chr2_3:42388263-42388282 Msa0292790:intron 35.0%
TTCTTGACAACGGAATGAAT+TGG + chr2_3:42388627-42388646 None:intergenic 35.0%
GAATTAACGCAAGTCTTACT+TGG + chr2_3:42388691-42388710 None:intergenic 35.0%
ATAACTAGAGTGTAACTCGT+GGG + chr2_3:42389210-42389229 None:intergenic 35.0%
TATAACTAGAGTGTAACTCG+TGG + chr2_3:42389211-42389230 None:intergenic 35.0%
AATAACAAAGGAGCAACTTG+TGG + chr2_3:42389406-42389425 None:intergenic 35.0%
CTTCAATGTCTATTGTCTCT+TGG + chr2_3:42389495-42389514 None:intergenic 35.0%
! TGGAGATTTTCCAGATGAAA+CGG + chr2_3:42389569-42389588 None:intergenic 35.0%
TTACAGCCACATATATCGTT+AGG + chr2_3:42389739-42389758 None:intergenic 35.0%
CGAATGAAAACTGTTAGGAA+AGG - chr2_3:42389826-42389845 Msa0292790:CDS 35.0%
! AAATCGGTTCTGTATTTCGT+AGG - chr2_3:42389857-42389876 Msa0292790:CDS 35.0%
AGGTCAGTAAATGCTTCTAA+AGG - chr2_3:42389946-42389965 Msa0292790:intron 35.0%
GGTCAGTAAATGCTTCTAAA+GGG - chr2_3:42389947-42389966 Msa0292790:intron 35.0%
! GTCAGTAAATGCTTCTAAAG+GGG - chr2_3:42389948-42389967 Msa0292790:intron 35.0%
ACCTCATTAACATCGGATTT+GGG + chr2_3:42390318-42390337 None:intergenic 35.0%
AACCTCATTAACATCGGATT+TGG + chr2_3:42390319-42390338 None:intergenic 35.0%
ATTGTGAACCACATTCACAT+CGG + chr2_3:42390364-42390383 None:intergenic 35.0%
AAGAAATGGTGGCAGATAAA+AGG - chr2_3:42390484-42390503 Msa0292790:CDS 35.0%
AGAAATGGTGGCAGATAAAA+GGG - chr2_3:42390485-42390504 Msa0292790:CDS 35.0%
!! TTTTGGTGTAAAGTAGGGAT+AGG - chr2_3:42390811-42390830 Msa0292790:intron 35.0%
! AAACAGAGCGTTAACAAACG+AGG + chr2_3:42383582-42383601 None:intergenic 40.0%
ATTGAAAGGGGAGAAGGTAA+CGG + chr2_3:42383698-42383717 None:intergenic 40.0%
! GGAAATGGTTTGGATATGGT+GGG + chr2_3:42383760-42383779 None:intergenic 40.0%
! TGGAAATGGTTTGGATATGG+TGG + chr2_3:42383761-42383780 None:intergenic 40.0%
!!! CATTCCTTTTTTCGCAAGTG+GGG - chr2_3:42383814-42383833 Msa0292790:three_prime_UTR 40.0%
TTAACCCCACTTGCGAAAAA+AGG + chr2_3:42383821-42383840 None:intergenic 40.0%
! TAGGGGTTTCCTTTTTAACG+CGG - chr2_3:42383863-42383882 Msa0292790:three_prime_UTR 40.0%
ACGGAAAAACCGCGTTAAAA+AGG + chr2_3:42383875-42383894 None:intergenic 40.0%
GTTTCAATCTTGCATCATGC+TGG - chr2_3:42384026-42384045 Msa0292790:CDS 40.0%
CTTTATCTGGTGAGGATTCA+TGG - chr2_3:42384128-42384147 Msa0292790:CDS 40.0%
! TGGTGAGGATTCATGGTTTT+TGG - chr2_3:42384135-42384154 Msa0292790:CDS 40.0%
GGTTTGGATTCATTAGTTGG+TGG - chr2_3:42384266-42384285 Msa0292790:CDS 40.0%
!! TGTTAACCCTCCAGTTTTGA+GGG - chr2_3:42384299-42384318 Msa0292790:CDS 40.0%
TCCATCCAAAAATCGAACTC+GGG - chr2_3:42384384-42384403 Msa0292790:CDS 40.0%
! AAGAACCCGAGTTCGATTTT+TGG + chr2_3:42384392-42384411 None:intergenic 40.0%
TCGGGTTCTTCTGAATTAGT+TGG - chr2_3:42384402-42384421 Msa0292790:CDS 40.0%
GGTTCTTCTGAATTAGTTGG+TGG - chr2_3:42384405-42384424 Msa0292790:CDS 40.0%
GAGCACTTATTCTGAGTGAT+TGG - chr2_3:42384451-42384470 Msa0292790:CDS 40.0%
! AGTAGTGAGCTCTGCAATTT+TGG + chr2_3:42384942-42384961 None:intergenic 40.0%
! CTCACTACTCACTGTGATTT+TGG - chr2_3:42384953-42384972 Msa0292790:CDS 40.0%
ATGAATCATACAGCAGTCCA+AGG + chr2_3:42385316-42385335 None:intergenic 40.0%
GTGGGTTTCTTCCCAAATAT+AGG + chr2_3:42385566-42385585 None:intergenic 40.0%
! TTTTACGCTGTGATCAATGC+AGG - chr2_3:42385706-42385725 Msa0292790:intron 40.0%
TCAATGCAGGTTCTTGAGTT+AGG - chr2_3:42385719-42385738 Msa0292790:intron 40.0%
! ATAACGGGAATGCATGTTGA+AGG - chr2_3:42385833-42385852 Msa0292790:intron 40.0%
TAACGGGAATGCATGTTGAA+GGG - chr2_3:42385834-42385853 Msa0292790:intron 40.0%
ACACGTATACGACCAAGAAA+AGG + chr2_3:42386090-42386109 None:intergenic 40.0%
!! TCGTGACTTTTCGTTGTTTC+AGG - chr2_3:42386332-42386351 Msa0292790:intron 40.0%
AAGGGTCTGTTCAAAAGCAA+TGG + chr2_3:42386370-42386389 None:intergenic 40.0%
! TTTTGAACAGACCCTTGTTG+AGG - chr2_3:42386374-42386393 Msa0292790:intron 40.0%
AAATTTGCAGCCCAATATGC+TGG - chr2_3:42386535-42386554 Msa0292790:intron 40.0%
AGGATTCTAGTGAGGGTTAT+GGG + chr2_3:42386666-42386685 None:intergenic 40.0%
AAGGATTCTAGTGAGGGTTA+TGG + chr2_3:42386667-42386686 None:intergenic 40.0%
TTCTCGTCCACTTTAAACCA+AGG + chr2_3:42386797-42386816 None:intergenic 40.0%
! TTGGTTTAAAGTGGACGAGA+AGG - chr2_3:42386796-42386815 Msa0292790:CDS 40.0%
TTAGCCGATCCTTATGTGAA+AGG - chr2_3:42386972-42386991 Msa0292790:intron 40.0%
CCCAAATGACCTTTCACATA+AGG + chr2_3:42386984-42387003 None:intergenic 40.0%
TATGTGAAAGGTCATTTGGG+AGG - chr2_3:42386984-42387003 Msa0292790:intron 40.0%
ACTTTCTCCAAAATGGCAAG+AGG - chr2_3:42387040-42387059 Msa0292790:intron 40.0%
!! CTGAATTCCTCTTGCCATTT+TGG + chr2_3:42387050-42387069 None:intergenic 40.0%
GGTTATTGAAGTTCGTGACA+AGG - chr2_3:42387106-42387125 Msa0292790:intron 40.0%
CACTAGATGTCGGTGTAAAA+TGG - chr2_3:42387343-42387362 Msa0292790:intron 40.0%
GCCACTACAGAGAGTAAAAA+TGG - chr2_3:42387704-42387723 Msa0292790:intron 40.0%
!! CCCATTTTTACTCTCTGTAG+TGG + chr2_3:42387708-42387727 None:intergenic 40.0%
TACAGAGAGTAAAAATGGGG+AGG - chr2_3:42387709-42387728 Msa0292790:intron 40.0%
AGGAATCAACATATAGGCTC+AGG + chr2_3:42387861-42387880 None:intergenic 40.0%
ATGTGGAGTGAACAATGTTG+AGG + chr2_3:42387881-42387900 None:intergenic 40.0%
GAAATAAGAGGGATTGTAGG+AGG + chr2_3:42387917-42387936 None:intergenic 40.0%
! TGAAGTCCGCACATTTTTGT+AGG + chr2_3:42388484-42388503 None:intergenic 40.0%
ATAACTAGAGTGTAACCCGT+GGG + chr2_3:42389341-42389360 None:intergenic 40.0%
TATAACTAGAGTGTAACCCG+TGG + chr2_3:42389342-42389361 None:intergenic 40.0%
! TTTTCTTGGCTCCCACATTT+GGG + chr2_3:42389677-42389696 None:intergenic 40.0%
AGGGAACCTAACGATATATG+TGG - chr2_3:42389730-42389749 Msa0292790:intron 40.0%
GGCTGTAATTCAACTGTATC+TGG - chr2_3:42389751-42389770 Msa0292790:intron 40.0%
!! ATACAGAACCGATTTTGTGC+AGG + chr2_3:42389852-42389871 None:intergenic 40.0%
GTTCTGTATTTCGTAGGAGT+CGG - chr2_3:42389863-42389882 Msa0292790:CDS 40.0%
ATTTCGTAGGAGTCGGAAAA+TGG - chr2_3:42389870-42389889 Msa0292790:CDS 40.0%
CGGAAAATGGACGATAATTC+AGG - chr2_3:42389883-42389902 Msa0292790:intron 40.0%
CTAATGTTATCACGTGGAGA+TGG + chr2_3:42389928-42389947 None:intergenic 40.0%
CATCTCCACGTGATAACATT+AGG - chr2_3:42389926-42389945 Msa0292790:intron 40.0%
ACTGACCTAATGTTATCACG+TGG + chr2_3:42389934-42389953 None:intergenic 40.0%
! GTAAATGCTTCTAAAGGGGT+TGG - chr2_3:42389952-42389971 Msa0292790:intron 40.0%
GTTATGGATGATAACACTGC+TGG - chr2_3:42389985-42390004 Msa0292790:intron 40.0%
TCTACCTGAATCTTACCAGT+CGG + chr2_3:42390015-42390034 None:intergenic 40.0%
ACTGGTAAGATTCAGGTAGA+AGG - chr2_3:42390015-42390034 Msa0292790:intron 40.0%
ACCAATGTTACCTTGAGCAA+TGG + chr2_3:42390292-42390311 None:intergenic 40.0%
CTCATTAACATCGGATTTGG+GGG + chr2_3:42390316-42390335 None:intergenic 40.0%
CCTCATTAACATCGGATTTG+GGG + chr2_3:42390317-42390336 None:intergenic 40.0%
ACCACATTCACATCGGATTT+GGG + chr2_3:42390357-42390376 None:intergenic 40.0%
AACCACATTCACATCGGATT+TGG + chr2_3:42390358-42390377 None:intergenic 40.0%
! TTTATGCCACTAAGTGCTGT+TGG - chr2_3:42390853-42390872 Msa0292790:intron 40.0%
!!! GTTGTACTTTTTCAGCTGAG+AGG - chr2_3:42390877-42390896 Msa0292790:intron 40.0%
TGACGTAAAGGGGAAGTAAC+GGG + chr2_3:42383606-42383625 None:intergenic 45.0%
GTGACGTAAAGGGGAAGTAA+CGG + chr2_3:42383607-42383626 None:intergenic 45.0%
AGTGAAACGGTGACGTAAAG+GGG + chr2_3:42383616-42383635 None:intergenic 45.0%
GAGTGAAACGGTGACGTAAA+GGG + chr2_3:42383617-42383636 None:intergenic 45.0%
AGAGTGAAACGGTGACGTAA+AGG + chr2_3:42383618-42383637 None:intergenic 45.0%
! GTGTTAACCCTCCAGTTTTG+AGG - chr2_3:42384298-42384317 Msa0292790:CDS 45.0%
!! ACCCGAGTTCGATTTTTGGA+TGG + chr2_3:42384388-42384407 None:intergenic 45.0%
!! CTGATTCTGAAACAGTTCGG+TGG - chr2_3:42385188-42385207 Msa0292790:intron 45.0%
ATGCATGTTGAAGGGAAGGT+AGG - chr2_3:42385842-42385861 Msa0292790:intron 45.0%
CAAGAAAAGGCCATTCCTTG+AGG + chr2_3:42386077-42386096 None:intergenic 45.0%
! CTCAAGGAATGGCCTTTTCT+TGG - chr2_3:42386075-42386094 Msa0292790:intron 45.0%
CTTGATGTGACAGAACTTCC+AGG - chr2_3:42386168-42386187 Msa0292790:intron 45.0%
ACAGAACTTCCAGGAATTGC+TGG - chr2_3:42386177-42386196 Msa0292790:intron 45.0%
GACTTCACTCACCTCAACAA+GGG + chr2_3:42386388-42386407 None:intergenic 45.0%
AGACTTCACTCACCTCAACA+AGG + chr2_3:42386389-42386408 None:intergenic 45.0%
GGATTCTAGTGAGGGTTATG+GGG + chr2_3:42386665-42386684 None:intergenic 45.0%
CACATCACCCACTATTGTAC+AGG + chr2_3:42387306-42387325 None:intergenic 45.0%
!! CTGTACAATAGTGGGTGATG+TGG - chr2_3:42387304-42387323 Msa0292790:intron 45.0%
AACCAATGTCACTCTCTTGC+AGG - chr2_3:42387625-42387644 Msa0292790:intron 45.0%
ACCAATGTCACTCTCTTGCA+GGG - chr2_3:42387626-42387645 Msa0292790:intron 45.0%
GGCAAGCCTACAAAAATGTG+CGG - chr2_3:42388475-42388494 Msa0292790:intron 45.0%
! CTTAGTACAAGAGAGGGCAT+TGG - chr2_3:42388656-42388675 Msa0292790:CDS 45.0%
GCAAATGAGACCACCAACAA+AGG - chr2_3:42389532-42389551 Msa0292790:intron 45.0%
TGAGAAGGAACCTTTGTTGG+TGG + chr2_3:42389545-42389564 None:intergenic 45.0%
GGATGAGAAGGAACCTTTGT+TGG + chr2_3:42389548-42389567 None:intergenic 45.0%
TCCTTCTCATCCGTTTCATC+TGG - chr2_3:42389556-42389575 Msa0292790:intron 45.0%
TCCAGATGAAACGGATGAGA+AGG + chr2_3:42389560-42389579 None:intergenic 45.0%
ATTGAAGGCCAAGAGAAGAC+AGG - chr2_3:42389619-42389638 Msa0292790:intron 45.0%
TCCAAACACCTGTCTTCTCT+TGG + chr2_3:42389630-42389649 None:intergenic 45.0%
AAGCGAAGTTCCCCAAATGT+GGG - chr2_3:42389663-42389682 Msa0292790:intron 45.0%
TTTCTTGGCTCCCACATTTG+GGG + chr2_3:42389676-42389695 None:intergenic 45.0%
! CTTTTCTTGGCTCCCACATT+TGG + chr2_3:42389678-42389697 None:intergenic 45.0%
CAAATGTGGGAGCCAAGAAA+AGG - chr2_3:42389676-42389695 Msa0292790:intron 45.0%
!!! CGTCGATTCTTGCCTTTTCT+TGG + chr2_3:42389691-42389710 None:intergenic 45.0%
CCTCGACACAGAAATTCAGA+GGG - chr2_3:42389711-42389730 Msa0292790:intron 45.0%
ACTGCTGCTGTCATTGTTCA+AGG + chr2_3:42389779-42389798 None:intergenic 45.0%
AGGAAAGGCCTGCACAAAAT+CGG - chr2_3:42389841-42389860 Msa0292790:CDS 45.0%
TAATTCAGGTCCTATTGCGC+AGG - chr2_3:42389897-42389916 Msa0292790:intron 45.0%
!! GGTTGGCGTGAAGTTTGTTA+TGG - chr2_3:42389969-42389988 Msa0292790:intron 45.0%
CTTTCCGACTGGTAAGATTC+AGG - chr2_3:42390008-42390027 Msa0292790:intron 45.0%
GGTAAGATTCAGGTAGAAGG+TGG - chr2_3:42390018-42390037 Msa0292790:intron 45.0%
TCAGGTAGAAGGTGGATCAA+CGG - chr2_3:42390026-42390045 Msa0292790:intron 45.0%
TAGAAGGTGGATCAACGGAA+GGG - chr2_3:42390031-42390050 Msa0292790:intron 45.0%
AAAGAGAGACGTCAAGGACA+TGG - chr2_3:42390074-42390093 Msa0292790:intron 45.0%
GCCATTGCTCAAGGTAACAT+TGG - chr2_3:42390288-42390307 Msa0292790:intron 45.0%
CCCCAAATCCGATGTTAATG+AGG - chr2_3:42390314-42390333 Msa0292790:intron 45.0%
CACATTCACATCGGATTTGG+GGG + chr2_3:42390355-42390374 None:intergenic 45.0%
CCACATTCACATCGGATTTG+GGG + chr2_3:42390356-42390375 None:intergenic 45.0%
!! AAAAGGCATTCTCCCCTGAA+AGG - chr2_3:42390421-42390440 Msa0292790:CDS 45.0%
GAGCTGTGTTCGATATCTGT+CGG + chr2_3:42390582-42390601 None:intergenic 45.0%
GTAGCTACATGCATCAACGT+CGG - chr2_3:42390650-42390669 Msa0292790:intron 45.0%
ACATGCATCAACGTCGGTAT+CGG - chr2_3:42390656-42390675 Msa0292790:intron 45.0%
ACAACACCAACAGCACTTAG+TGG + chr2_3:42390862-42390881 None:intergenic 45.0%
!!! GTTATAATATTTTTTATTTT+TGG + chr2_3:42388073-42388092 None:intergenic 5.0%
!!! TAACCCTCCAGTTTTGAGGG+AGG - chr2_3:42384302-42384321 Msa0292790:CDS 50.0%
!!! AACCCTCCAGTTTTGAGGGA+GGG - chr2_3:42384303-42384322 Msa0292790:CDS 50.0%
CTTAGTAACCGGCTGAACTC+CGG + chr2_3:42384339-42384358 None:intergenic 50.0%
CTTGAGAGTTATTGGGGCTG+TGG - chr2_3:42385059-42385078 Msa0292790:intron 50.0%
CCAAGTGGTCATCATCACAC+TGG + chr2_3:42385617-42385636 None:intergenic 50.0%
! CCAGTGTGATGATGACCACT+TGG - chr2_3:42385614-42385633 Msa0292790:intron 50.0%
GGGAATGCATGTTGAAGGGA+AGG - chr2_3:42385838-42385857 Msa0292790:intron 50.0%
TTGAAGGGAAGGTAGGACTG+CGG - chr2_3:42385849-42385868 Msa0292790:intron 50.0%
GGGTGAAGTTCCTCAAGGAA+TGG - chr2_3:42386064-42386083 Msa0292790:intron 50.0%
AACTTCCAGGAATTGCTGGC+TGG - chr2_3:42386181-42386200 Msa0292790:intron 50.0%
!! ATTGCTGGCTGGCTTGTAAG+TGG - chr2_3:42386192-42386211 Msa0292790:intron 50.0%
AGACAGACGGAACTAACCCA+AGG + chr2_3:42387151-42387170 None:intergenic 50.0%
TCCCTGCAAGAGAGTGACAT+TGG + chr2_3:42387630-42387649 None:intergenic 50.0%
TAATTGAGGTAAGGTGGGGG+AGG + chr2_3:42387783-42387802 None:intergenic 50.0%
GCCAAGAGAAGACAGGTGTT+TGG - chr2_3:42389626-42389645 Msa0292790:intron 50.0%
GGTGTTTGGATACATCAGCC+AGG - chr2_3:42389640-42389659 Msa0292790:intron 50.0%
ATTTGGGGAACTTCGCTTCC+TGG + chr2_3:42389661-42389680 None:intergenic 50.0%
GAAGCGAAGTTCCCCAAATG+TGG - chr2_3:42389662-42389681 Msa0292790:intron 50.0%
GCCTCGACACAGAAATTCAG+AGG - chr2_3:42389710-42389729 Msa0292790:intron 50.0%
CCCTCTGAATTTCTGTGTCG+AGG + chr2_3:42389714-42389733 None:intergenic 50.0%
GATGGAAAGTCCTGCGCAAT+AGG + chr2_3:42389910-42389929 None:intergenic 50.0%
GTAGAAGGTGGATCAACGGA+AGG - chr2_3:42390030-42390049 Msa0292790:intron 50.0%
TCCTTGACGTCTCTCTTTGC+CGG + chr2_3:42390072-42390091 None:intergenic 50.0%
GTTTCACAGGCCATTGCTCA+AGG - chr2_3:42390279-42390298 Msa0292790:intron 50.0%
CCCCAAATCCGATGTGAATG+TGG - chr2_3:42390353-42390372 Msa0292790:intron 50.0%
! TTGACCACAGTGGTGTTGGA+TGG + chr2_3:42390390-42390409 None:intergenic 50.0%
CTTGTTGACCACAGTGGTGT+TGG + chr2_3:42390394-42390413 None:intergenic 50.0%
CAACACCACTGTGGTCAACA+AGG - chr2_3:42390392-42390411 Msa0292790:CDS 50.0%
GGTCAACAAGGAGCCTCAAA+AGG - chr2_3:42390404-42390423 Msa0292790:CDS 50.0%
! TCAGGGGAGAATGCCTTTTG+AGG + chr2_3:42390420-42390439 None:intergenic 50.0%
!!! ACCCTCCAGTTTTGAGGGAG+GGG - chr2_3:42384304-42384323 Msa0292790:CDS 55.0%
CTGGTAATCCGGAGTTCAGC+CGG - chr2_3:42384328-42384347 Msa0292790:CDS 55.0%
GGTAGGGGTGAAGTTCCTCA+AGG - chr2_3:42386059-42386078 Msa0292790:intron 55.0%
ACAAGCCAGCCAGCAATTCC+TGG + chr2_3:42386189-42386208 None:intergenic 55.0%
!! GGCTGGCTTGTAAGTGGACA+TGG - chr2_3:42386198-42386217 Msa0292790:intron 55.0%
ATCAACACACGCGCAACCCA+CGG - chr2_3:42389322-42389341 Msa0292790:intron 55.0%
!! AACACTGCTGGCTTTCCGAC+TGG - chr2_3:42389997-42390016 Msa0292790:intron 55.0%
TCTCTCTTTGCCGGGCTATC+AGG + chr2_3:42390063-42390082 None:intergenic 55.0%
CCTTGACGTCTCTCTTTGCC+GGG + chr2_3:42390071-42390090 None:intergenic 55.0%
TGTGCCATCCAACACCACTG+TGG - chr2_3:42390383-42390402 Msa0292790:CDS 55.0%
AGGCTCCTTGTTGACCACAG+TGG + chr2_3:42390400-42390419 None:intergenic 55.0%
GCCCCTCCCTCAAAACTGGA+GGG + chr2_3:42384308-42384327 None:intergenic 60.0%
CGGCTGAACTCCGGATTACC+AGG + chr2_3:42384330-42384349 None:intergenic 60.0%
TGAGGTAAGGTGGGGGAGGA+GGG + chr2_3:42387779-42387798 None:intergenic 60.0%
TTGAGGTAAGGTGGGGGAGG+AGG + chr2_3:42387780-42387799 None:intergenic 60.0%
TCAACACACGCGCAACCCAC+GGG - chr2_3:42389323-42389342 Msa0292790:intron 60.0%
GAGCAACTTGTGGCGCTACG+TGG + chr2_3:42389396-42389415 None:intergenic 60.0%
GGTGGATCAACGGAAGGGAG+TGG - chr2_3:42390036-42390055 Msa0292790:intron 60.0%
AGGGAGTGGTCCTGATAGCC+CGG - chr2_3:42390050-42390069 Msa0292790:intron 60.0%
CCCGGCAAAGAGAGACGTCA+AGG - chr2_3:42390068-42390087 Msa0292790:intron 60.0%
GGCCCCTCCCTCAAAACTGG+AGG + chr2_3:42384309-42384328 None:intergenic 65.0%
CCAGGCCCCTCCCTCAAAAC+TGG + chr2_3:42384312-42384331 None:intergenic 65.0%
!!! CCAGTTTTGAGGGAGGGGCC+TGG - chr2_3:42384309-42384328 Msa0292790:CDS 65.0%
GAGGGAGGGGCCTGGTAATC+CGG - chr2_3:42384317-42384336 Msa0292790:CDS 65.0%
GAGGTAAGGTGGGGGAGGAG+GGG + chr2_3:42387778-42387797 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 42383546 42390965 42383546 ID=Msa0292790;Name=Msa0292790
chr2_3 mRNA 42383546 42390965 42383546 ID=Msa0292790-mRNA-1;Parent=Msa0292790;Name=Msa0292790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.83|0.69|1|0.83|0.69|13|435|774
chr2_3 exon 42383546 42385039 42383546 ID=Msa0292790-mRNA-1:exon:13595;Parent=Msa0292790-mRNA-1
chr2_3 exon 42386741 42386886 42386741 ID=Msa0292790-mRNA-1:exon:13594;Parent=Msa0292790-mRNA-1
chr2_3 exon 42387392 42387541 42387392 ID=Msa0292790-mRNA-1:exon:13593;Parent=Msa0292790-mRNA-1
chr2_3 exon 42387627 42387719 42387627 ID=Msa0292790-mRNA-1:exon:13592;Parent=Msa0292790-mRNA-1
chr2_3 exon 42387918 42387966 42387918 ID=Msa0292790-mRNA-1:exon:13591;Parent=Msa0292790-mRNA-1
chr2_3 exon 42388116 42388157 42388116 ID=Msa0292790-mRNA-1:exon:13590;Parent=Msa0292790-mRNA-1
chr2_3 exon 42388305 42388457 42388305 ID=Msa0292790-mRNA-1:exon:13589;Parent=Msa0292790-mRNA-1
chr2_3 exon 42388652 42388783 42388652 ID=Msa0292790-mRNA-1:exon:13588;Parent=Msa0292790-mRNA-1
chr2_3 exon 42388876 42388968 42388876 ID=Msa0292790-mRNA-1:exon:13587;Parent=Msa0292790-mRNA-1
chr2_3 exon 42389187 42389330 42389187 ID=Msa0292790-mRNA-1:exon:13586;Parent=Msa0292790-mRNA-1
chr2_3 exon 42389823 42389897 42389823 ID=Msa0292790-mRNA-1:exon:13585;Parent=Msa0292790-mRNA-1
chr2_3 exon 42390375 42390511 42390375 ID=Msa0292790-mRNA-1:exon:13584;Parent=Msa0292790-mRNA-1
chr2_3 exon 42390914 42390965 42390914 ID=Msa0292790-mRNA-1:exon:13583;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42390914 42390965 42390914 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42390375 42390511 42390375 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42389823 42389897 42389823 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42389187 42389330 42389187 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42388876 42388968 42388876 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42388652 42388783 42388652 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42388305 42388457 42388305 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42388116 42388157 42388116 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42387918 42387966 42387918 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42387627 42387719 42387627 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42387392 42387541 42387392 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42386741 42386886 42386741 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 CDS 42383981 42385039 42383981 ID=Msa0292790-mRNA-1:cds;Parent=Msa0292790-mRNA-1
chr2_3 three_prime_UTR 42383546 42383980 42383546 ID=Msa0292790-mRNA-1:three_prime_utr;Parent=Msa0292790-mRNA-1
Gene Sequence

>Msa0292790

ATGAGATTACTATTACTTCTTCTTGTTACATTGCCTCGTTTGTTAACGCTCTTTTTTGTTATAATGGATATTACAGAAGTTTCAATCTTGCATCATGCTGGAATCGTTTTGATTTCTCTATGGTTGCTATCTACATTCGATCGTTGTCATGCTGCTTTTTATTTTGTGGCTTTGATCTATCTTTATCTGGTTCATGAACGTTATGTTACAAGGCTAAGGAAGAAGTTGCAGTTTGAAGAGAGAAAACAATCTAATCAAAGAAGGGTACTTTCTGATTCTGAAACAGTTCGGTGGTTGAACCATGCAGTTGAAAATATATGGCCTATATGTATGGAACAGATTGCATCTCAGAAGATTTTACTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAAGAAGCTTCTGTTCAGCACCTATATTTGGGAAGAAACCCACCTTTGATTACTGATATCAGGGTACTTCGCCAGTGTGATGATGACCACTTGGTTCTTGAGTTAGGAATGAATTTTCTCACGGGTGATGATATGAGTGCAATACTTGCTGTGAAACTAAGAAAAAGATTGGGCTTTGGAATGTCAACAAAGCTGCATATAACGGGAATGCATGTTGAAGGGAAGGTCTTGGTAGGGGTGAAGTTCCTCAAGGAATGGCCTTTTCTTGGTCGTATACGTGTATGCTTTGTTGAGCCTCCATATTTTCAGATGACTGTCAAACCTATTTTTACACATGGGCTTGATGTGACAGAACTTCCAGGAATTGCTGGCTGGCTTGATAAGCTTCTGTCCATTGCTTTTGAACAGACCCTTGTTGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTTGTATCACCAGACCAAGAGCCTTGGTTTAAAGTGGACGAGAAGGAACCTGTTGCTTATGCAAAAATCGAAATTGTTGAGGCAGCTGAAATGAAGCCATCAGATCTAAATGGATTAGCCGATCCTTATGTGAAAGGTCATTTGGGAGGATATAGATTCAGGACGAAGATACAAAAGAAAACACTTTCTCCAAAATGGCAAGAGGAATTCAGAATTCCCATCATAACATGGGATTGTAACAATGTTCTGGTTATTGAAGTTCAACCAATGTCACTCTCTTGCAGGGACTGTTCTGTGAACATCAATGATTTTAGGGACGGGCAAAAATATGATAAGTGGGTGCCACTACAGAGAGTAAAAATGGGGAGGTTGCACTTGCGAATAACAGTTCTTGATGATAAGGAAAAGGAAGCTGATACTACATGTGACCAAGAGACAATAGACATTGAAGAAAGAAAAGATTCTTTTGCAAATGAGACCACCAACAAAGGTTCCTTCTCATCCGTTTCATCTGGAAAATCTCCAAAATTGGCAGATAACTATGAGCCAATAAAAATTGAAGGCCAAGAGAAGACAGGTGTTTGGATACATCAGCCAGGAAGCGAAGTTCCCCAAATGTGGGAGCCAAGAAAAGGCAAGAATCGACGCCTCGACACAGAAATTCAGAGGGAACCTAACGATATATGTGGCTGTAATTCAACTGTATCTGGATCCTTGAACAATGACAGCAGCAGTCCCGATGATAATGCTGAAGATAAACATCGAATGAAAACTGTTAGGAAAGGCCTGCACAAAATCGGTTCTGTATTTCGTAGGAGTCGGAAAATGGACGATAATTCAGGTCCTATTGCGCAGGACTTTCCATCTCCACGTGATAACATTAGGTCAGTAAATGCTTCTAAAGGGGTTGGCGTGAAGTTTGTTATGGATGATAACACTGCTGGCTTTCCGACTGGTAAGATTCAGGTAGAAGGTGGATCAACGGAAGGGAGTGGTCCTGATAGCCCGGCAAAGAGAGACGTCAAGGACATGGCAAAGAATATTTTCAAAAATGCGGAAAAATCAGCTCGCAGCTTAAAACATGTTCTTTCTCGTAAATCAAGGAAATCAAAAGGTGATTCAGCAGAAACATTTCGTGAAAGAGAAAATGAATCTGACTCATCTAGTGATGAATCTCTTTCAGTTCAGTCCCCAAAAGATGCAAGAACTAAAGTTGTTTCACAGGCCATTGCTCAAGGTAACATTGGTTCCCCCAAATCCGATGTTAATGAGGTTCACAATGTTCGTTCCCCCAAATCCGATGTGAATGTGGTTCACAATGTGCCATCCAACACCACTGTGGTCAACAAGGAGCCTCAAAAGGCATTCTCCCCTGAAAGGTCTAATGAAAAAATTGTTATGTCTGGCGAACATGATAAAGAAGAAATGGTGGCAGATAAAAGGGTTTTCAGCAGTATAGCAGAGTGA

Protein sequence

>Msa0292790

MRLLLLLLVTLPRLLTLFFVIMDITEVSILHHAGIVLISLWLLSTFDRCHAAFYFVALIYLYLVHERYVTRLRKKLQFEERKQSNQRRVLSDSETVRWLNHAVENIWPICMEQIASQKILLPIIPWFLEKYKPWTAKEASVQHLYLGRNPPLITDIRVLRQCDDDHLVLELGMNFLTGDDMSAILAVKLRKRLGFGMSTKLHITGMHVEGKVLVGVKFLKEWPFLGRIRVCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFVSPDQEPWFKVDEKEPVAYAKIEIVEAAEMKPSDLNGLADPYVKGHLGGYRFRTKIQKKTLSPKWQEEFRIPIITWDCNNVLVIEVQPMSLSCRDCSVNINDFRDGQKYDKWVPLQRVKMGRLHLRITVLDDKEKEADTTCDQETIDIEERKDSFANETTNKGSFSSVSSGKSPKLADNYEPIKIEGQEKTGVWIHQPGSEVPQMWEPRKGKNRRLDTEIQREPNDICGCNSTVSGSLNNDSSSPDDNAEDKHRMKTVRKGLHKIGSVFRRSRKMDDNSGPIAQDFPSPRDNIRSVNASKGVGVKFVMDDNTAGFPTGKIQVEGGSTEGSGPDSPAKRDVKDMAKNIFKNAEKSARSLKHVLSRKSRKSKGDSAETFRERENESDSSSDESLSVQSPKDARTKVVSQAIAQGNIGSPKSDVNEVHNVRSPKSDVNVVHNVPSNTTVVNKEPQKAFSPERSNEKIVMSGEHDKEEMVADKRVFSSIAE*