Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189320 | XP_003593098.1 | 97.877 | 424 | 9 | 0 | 1 | 424 | 1 | 424 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189320 | A2Q483 | 97.877 | 424 | 9 | 0 | 1 | 424 | 1 | 424 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003780 | Msa0189320 | 0.819622 | 1.054485e-52 | -8.615850e-47 |
| Msa0004860 | Msa0189320 | 0.813309 | 2.732657e-51 | -8.615850e-47 |
| Msa0005420 | Msa0189320 | 0.816713 | 4.799240e-52 | -8.615850e-47 |
| Msa0005430 | Msa0189320 | 0.804795 | 1.820122e-49 | -8.615850e-47 |
| Msa0007440 | Msa0189320 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
| Msa0009430 | Msa0189320 | 0.862111 | 6.387560e-64 | -8.615850e-47 |
| Msa0020930 | Msa0189320 | 0.840682 | 7.503961e-58 | -8.615850e-47 |
| Msa0028660 | Msa0189320 | 0.806065 | 9.858109e-50 | -8.615850e-47 |
| Msa0032090 | Msa0189320 | 0.829614 | 4.664963e-55 | -8.615850e-47 |
| Msa0032430 | Msa0189320 | 0.817408 | 3.348598e-52 | -8.615850e-47 |
| Msa0033110 | Msa0189320 | 0.822136 | 2.784123e-53 | -8.615850e-47 |
| Msa0033260 | Msa0189320 | 0.829747 | 4.330633e-55 | -8.615850e-47 |
| Msa0037570 | Msa0189320 | -0.810728 | 9.979999e-51 | -8.615850e-47 |
| Msa0054780 | Msa0189320 | 0.821726 | 3.463209e-53 | -8.615850e-47 |
| Msa0068680 | Msa0189320 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
| Msa0072420 | Msa0189320 | 0.827681 | 1.367772e-54 | -8.615850e-47 |
| Msa0075360 | Msa0189320 | 0.812928 | 3.312353e-51 | -8.615850e-47 |
| Msa0076320 | Msa0189320 | 0.815973 | 7.023958e-52 | -8.615850e-47 |
| Msa0079380 | Msa0189320 | 0.818792 | 1.628852e-52 | -8.615850e-47 |
| Msa0083280 | Msa0189320 | 0.825298 | 5.058518e-54 | -8.615850e-47 |
| Msa0090360 | Msa0189320 | 0.820080 | 8.284061e-53 | -8.615850e-47 |
| Msa0091410 | Msa0189320 | 0.828447 | 8.945946e-55 | -8.615850e-47 |
| Msa0091460 | Msa0189320 | 0.804347 | 2.256420e-49 | -8.615850e-47 |
| Msa0114060 | Msa0189320 | 0.837671 | 4.529510e-57 | -8.615850e-47 |
| Msa0127650 | Msa0189320 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
| Msa0137840 | Msa0189320 | 0.819469 | 1.142381e-52 | -8.615850e-47 |
| Msa0145440 | Msa0189320 | 0.806184 | 9.305189e-50 | -8.615850e-47 |
| Msa0148080 | Msa0189320 | 0.804083 | 2.561404e-49 | -8.615850e-47 |
| Msa0150300 | Msa0189320 | 0.878158 | 3.522326e-69 | -8.615850e-47 |
| Msa0159930 | Msa0189320 | 0.846629 | 1.926718e-59 | -8.615850e-47 |
| Msa0172070 | Msa0189320 | 0.821457 | 3.996969e-53 | -8.615850e-47 |
| Msa0184040 | Msa0189320 | 0.818893 | 1.545699e-52 | -8.615850e-47 |
| Msa0184780 | Msa0189320 | 0.807797 | 4.240207e-50 | -8.615850e-47 |
| Msa0189320 | Msa0191050 | 0.805112 | 1.562431e-49 | -8.615850e-47 |
| Msa0189320 | Msa0194950 | -0.822673 | 2.088228e-53 | -8.615850e-47 |
| Msa0189320 | Msa0205130 | 0.802644 | 5.086391e-49 | -8.615850e-47 |
| Msa0189320 | Msa0211150 | 0.819369 | 1.204353e-52 | -8.615850e-47 |
| Msa0189320 | Msa0231690 | 0.853913 | 1.744692e-61 | -8.615850e-47 |
| Msa0189320 | Msa0240920 | 0.842467 | 2.540555e-58 | -8.615850e-47 |
| Msa0189320 | Msa0241390 | 0.863792 | 1.932483e-64 | -8.615850e-47 |
| Msa0189320 | Msa0257520 | 0.808974 | 2.378508e-50 | -8.615850e-47 |
| Msa0189320 | Msa0260680 | 0.849025 | 4.212171e-60 | -8.615850e-47 |
| Msa0189320 | Msa0266350 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
| Msa0189320 | Msa0271510 | 0.946002 | 1.056444e-104 | -8.615850e-47 |
| Msa0189320 | Msa0272300 | 0.803182 | 3.938306e-49 | -8.615850e-47 |
| Msa0189320 | Msa0279220 | 0.816457 | 5.476309e-52 | -8.615850e-47 |
| Msa0189320 | Msa0279240 | 0.837993 | 3.745233e-57 | -8.615850e-47 |
| Msa0189320 | Msa0280090 | 0.849258 | 3.628230e-60 | -8.615850e-47 |
| Msa0189320 | Msa0298320 | 0.823347 | 1.454375e-53 | -8.615850e-47 |
| Msa0189320 | Msa0309770 | 0.906908 | 8.963899e-81 | -8.615850e-47 |
| Msa0189320 | Msa0315440 | -0.826660 | 2.401885e-54 | -8.615850e-47 |
| Msa0189320 | Msa0318680 | 0.830616 | 2.657043e-55 | -8.615850e-47 |
| Msa0189320 | Msa0318980 | 0.846532 | 2.047035e-59 | -8.615850e-47 |
| Msa0189320 | Msa0334550 | 0.860108 | 2.598363e-63 | -8.615850e-47 |
| Msa0189320 | Msa0341780 | -0.807739 | 4.363297e-50 | -8.615850e-47 |
| Msa0189320 | Msa0345200 | 0.803793 | 2.942807e-49 | -8.615850e-47 |
| Msa0189320 | Msa0352330 | 0.813453 | 2.540193e-51 | -8.615850e-47 |
| Msa0189320 | Msa0366890 | 0.805768 | 1.138232e-49 | -8.615850e-47 |
| Msa0189320 | Msa0383800 | 0.835487 | 1.631097e-56 | -8.615850e-47 |
| Msa0189320 | Msa0398670 | 0.884726 | 1.499380e-71 | -8.615850e-47 |
| Msa0189320 | Msa0402650 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0189320 | Msa0408400 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0189320 | Msa0432080 | 0.825713 | 4.035276e-54 | -8.615850e-47 |
| Msa0189320 | Msa0433640 | 0.801186 | 1.013894e-48 | -8.615850e-47 |
| Msa0189320 | Msa0436760 | 0.805799 | 1.121028e-49 | -8.615850e-47 |
| Msa0189320 | Msa0447220 | 0.810772 | 9.761044e-51 | -8.615850e-47 |
| Msa0189320 | Msa0463010 | 0.833169 | 6.224656e-56 | -8.615850e-47 |
| Msa0189320 | Msa0477080 | 0.841688 | 4.084025e-58 | -8.615850e-47 |
| Msa0189320 | Msa0479170 | 0.823831 | 1.120736e-53 | -8.615850e-47 |
| Msa0189320 | Msa0481530 | 0.818571 | 1.828243e-52 | -8.615850e-47 |
| Msa0189320 | Msa0484720 | 0.837181 | 6.047347e-57 | -8.615850e-47 |
| Msa0189320 | Msa0493630 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0189320 | Msa0510350 | 0.816675 | 4.894417e-52 | -8.615850e-47 |
| Msa0189320 | Msa0521500 | 0.822026 | 2.951392e-53 | -8.615850e-47 |
| Msa0189320 | Msa0530820 | 0.833451 | 5.293670e-56 | -8.615850e-47 |
| Msa0189320 | Msa0539410 | 0.814168 | 1.767585e-51 | -8.615850e-47 |
| Msa0189320 | Msa0541410 | 0.811021 | 8.623436e-51 | -8.615850e-47 |
| Msa0189320 | Msa0548240 | 0.846001 | 2.856414e-59 | -8.615850e-47 |
| Msa0189320 | Msa0553050 | 0.845007 | 5.312472e-59 | -8.615850e-47 |
| Msa0189320 | Msa0563400 | 0.805428 | 1.341403e-49 | -8.615850e-47 |
| Msa0189320 | Msa0567350 | 0.811366 | 7.257191e-51 | -8.615850e-47 |
| Msa0189320 | Msa0577500 | 0.808556 | 2.922905e-50 | -8.615850e-47 |
| Msa0189320 | Msa0585560 | 0.803811 | 2.917573e-49 | -8.615850e-47 |
| Msa0189320 | Msa0596800 | 0.811220 | 7.806777e-51 | -8.615850e-47 |
| Msa0189320 | Msa0602390 | 0.827058 | 1.929570e-54 | -8.615850e-47 |
| Msa0189320 | Msa0606720 | 0.863791 | 1.934327e-64 | -8.615850e-47 |
| Msa0189320 | Msa0607050 | 0.849484 | 3.138588e-60 | -8.615850e-47 |
| Msa0189320 | Msa0612960 | 0.803510 | 3.368860e-49 | -8.615850e-47 |
| Msa0189320 | Msa0623790 | 0.857412 | 1.661269e-62 | -8.615850e-47 |
| Msa0189320 | Msa0636070 | 0.803693 | 3.086861e-49 | -8.615850e-47 |
| Msa0189320 | Msa0643560 | 0.850226 | 1.946940e-60 | -8.615850e-47 |
| Msa0189320 | Msa0647500 | 0.879112 | 1.625824e-69 | -8.615850e-47 |
| Msa0189320 | Msa0649490 | 0.820432 | 6.881784e-53 | -8.615850e-47 |
| Msa0189320 | Msa0660460 | -0.821585 | 3.733264e-53 | -8.615850e-47 |
| Msa0189320 | Msa0663390 | 0.823464 | 1.365523e-53 | -8.615850e-47 |
| Msa0189320 | Msa0666270 | 0.830035 | 3.683619e-55 | -8.615850e-47 |
| Msa0189320 | Msa0673630 | 0.828588 | 8.271870e-55 | -8.615850e-47 |
| Msa0189320 | Msa0688960 | 0.801492 | 8.775640e-49 | -8.615850e-47 |
| Msa0189320 | Msa0690150 | 0.843022 | 1.809370e-58 | -8.615850e-47 |
| Msa0189320 | Msa0691900 | 0.809556 | 1.784719e-50 | -8.615850e-47 |
| Msa0189320 | Msa0693010 | -0.821476 | 3.957307e-53 | -8.615850e-47 |
| Msa0189320 | Msa0695100 | 0.807919 | 3.995517e-50 | -8.615850e-47 |
| Msa0189320 | Msa0698400 | 0.813749 | 2.186687e-51 | -8.615850e-47 |
| Msa0189320 | Msa0707250 | 0.812059 | 5.128837e-51 | -8.615850e-47 |
| Msa0189320 | Msa0709400 | 0.880663 | 4.561095e-70 | -8.615850e-47 |
| Msa0189320 | Msa0711450 | 0.843971 | 1.009074e-58 | -8.615850e-47 |
| Msa0189320 | Msa0711780 | 0.821059 | 4.937874e-53 | -8.615850e-47 |
| Msa0189320 | Msa0741440 | 0.846166 | 2.575916e-59 | -8.615850e-47 |
| Msa0189320 | Msa0742750 | 0.806037 | 9.990150e-50 | -8.615850e-47 |
| Msa0189320 | Msa0744000 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
| Msa0189320 | Msa0788850 | 0.862195 | 6.019219e-64 | -8.615850e-47 |
| Msa0189320 | Msa0794670 | 0.836722 | 7.920065e-57 | -8.615850e-47 |
| Msa0189320 | Msa0802010 | 0.815602 | 8.500774e-52 | -8.615850e-47 |
| Msa0189320 | Msa0806790 | 0.809206 | 2.121733e-50 | -8.615850e-47 |
| Msa0189320 | Msa0808270 | 0.806455 | 8.157497e-50 | -8.615850e-47 |
| Msa0189320 | Msa0827930 | 0.806734 | 7.125210e-50 | -8.615850e-47 |
| Msa0189320 | Msa0830540 | 0.804827 | 1.791898e-49 | -8.615850e-47 |
| Msa0189320 | Msa0831110 | 0.815651 | 8.289299e-52 | -8.615850e-47 |
| Msa0189320 | Msa0832150 | 0.806149 | 9.464559e-50 | -8.615850e-47 |
| Msa0189320 | Msa0849500 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
| Msa0189320 | Msa0849510 | 0.836626 | 8.383130e-57 | -8.615850e-47 |
| Msa0189320 | Msa0864300 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0189320 | Msa0866950 | 0.800185 | 1.622939e-48 | -8.615850e-47 |
| Msa0189320 | Msa0869860 | 0.803262 | 3.791597e-49 | -8.615850e-47 |
| Msa0189320 | Msa0880020 | 0.831725 | 1.418269e-55 | -8.615850e-47 |
| Msa0189320 | Msa0895120 | 0.835805 | 1.355171e-56 | -8.615850e-47 |
| Msa0189320 | Msa0945970 | 0.855057 | 8.145121e-62 | -8.615850e-47 |
| Msa0189320 | Msa0959140 | 0.845320 | 4.370948e-59 | -8.615850e-47 |
| Msa0189320 | Msa0963270 | 0.804168 | 2.458405e-49 | -8.615850e-47 |
| Msa0189320 | Msa0970060 | 0.817527 | 3.148223e-52 | -8.615850e-47 |
| Msa0189320 | Msa0979730 | 0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa0189320 | Msa0989540 | 0.800870 | 1.176679e-48 | -8.615850e-47 |
| Msa0189320 | Msa0994950 | 0.843111 | 1.712872e-58 | -8.615850e-47 |
| Msa0189320 | Msa1017630 | 0.845095 | 5.029590e-59 | -8.615850e-47 |
| Msa0189320 | Msa1018100 | 0.814911 | 1.210162e-51 | -8.615850e-47 |
| Msa0189320 | Msa1026740 | 0.811627 | 6.370559e-51 | -8.615850e-47 |
| Msa0189320 | Msa1033400 | 0.840105 | 1.062579e-57 | -8.615850e-47 |
| Msa0189320 | Msa1043690 | 0.812162 | 4.870281e-51 | -8.615850e-47 |
| Msa0189320 | Msa1051880 | 0.835714 | 1.428835e-56 | -8.615850e-47 |
| Msa0189320 | Msa1073080 | 0.813093 | 3.048004e-51 | -8.615850e-47 |
| Msa0189320 | Msa1081980 | 0.856026 | 4.247247e-62 | -8.615850e-47 |
| Msa0189320 | Msa1083300 | 0.801118 | 1.047021e-48 | -8.615850e-47 |
| Msa0189320 | Msa1121440 | 0.811714 | 6.097134e-51 | -8.615850e-47 |
| Msa0189320 | Msa1124960 | 0.870082 | 1.908767e-66 | -8.615850e-47 |
| Msa0189320 | Msa1128060 | 0.847193 | 1.350413e-59 | -8.615850e-47 |
| Msa0189320 | Msa1147280 | 0.808581 | 2.886648e-50 | -8.615850e-47 |
| Msa0189320 | Msa1159840 | 0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0189320 | Msa1162270 | 0.825478 | 4.586270e-54 | -8.615850e-47 |
| Msa0189320 | Msa1165920 | 0.835782 | 1.373267e-56 | -8.615850e-47 |
| Msa0189320 | Msa1165940 | 0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa0189320 | Msa1167340 | 0.811899 | 5.558103e-51 | -8.615850e-47 |
| Msa0189320 | Msa1170410 | 0.844400 | 7.738083e-59 | -8.615850e-47 |
| Msa0189320 | Msa1179630 | 0.808275 | 3.354515e-50 | -8.615850e-47 |
| Msa0189320 | Msa1181910 | 0.800855 | 1.185074e-48 | -8.615850e-47 |
| Msa0189320 | Msa1183950 | 0.851189 | 1.043659e-60 | -8.615850e-47 |
| Msa0189320 | Msa1204530 | 0.817589 | 3.048993e-52 | -8.615850e-47 |
| Msa0189320 | Msa1206670 | 0.830284 | 3.201877e-55 | -8.615850e-47 |
| Msa0189320 | Msa1228520 | 0.813283 | 2.768011e-51 | -8.615850e-47 |
| Msa0189320 | Msa1244600 | 0.834861 | 2.346343e-56 | -8.615850e-47 |
| Msa0189320 | Msa1246510 | 0.804406 | 2.193811e-49 | -8.615850e-47 |
| Msa0189320 | Msa1267430 | 0.803725 | 3.039514e-49 | -8.615850e-47 |
| Msa0189320 | Msa1275050 | 0.847214 | 1.332277e-59 | -8.615850e-47 |
| Msa0189320 | Msa1294120 | 0.852068 | 5.884426e-61 | -8.615850e-47 |
| Msa0189320 | Msa1296760 | 0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa0189320 | Msa1305660 | 0.821553 | 3.798872e-53 | -8.615850e-47 |
| Msa0189320 | Msa1306840 | 0.808115 | 3.629925e-50 | -8.615850e-47 |
| Msa0189320 | Msa1331000 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0189320 | Msa1331320 | 0.816184 | 6.304400e-52 | -8.615850e-47 |
| Msa0189320 | Msa1335540 | 0.842791 | 2.084154e-58 | -8.615850e-47 |
| Msa0189320 | Msa1336290 | 0.807291 | 5.429658e-50 | -8.615850e-47 |
| Msa0189320 | Msa1346840 | 0.816806 | 4.574326e-52 | -8.615850e-47 |
| Msa0189320 | Msa1351890 | 0.846934 | 1.589304e-59 | -8.615850e-47 |
| Msa0189320 | Msa1353980 | 0.826346 | 2.853062e-54 | -8.615850e-47 |
| Msa0189320 | Msa1356140 | 0.812222 | 4.725485e-51 | -8.615850e-47 |
| Msa0189320 | Msa1357620 | 0.828752 | 7.550589e-55 | -8.615850e-47 |
| Msa0189320 | Msa1358500 | 0.810059 | 1.391490e-50 | -8.615850e-47 |
| Msa0189320 | Msa1374120 | 0.838054 | 3.611372e-57 | -8.615850e-47 |
| Msa0189320 | Msa1374470 | 0.811535 | 6.669779e-51 | -8.615850e-47 |
| Msa0189320 | Msa1382620 | 0.821676 | 3.557365e-53 | -8.615850e-47 |
| Msa0189320 | Msa1386780 | 0.809568 | 1.774742e-50 | -8.615850e-47 |
| Msa0189320 | Msa1389510 | 0.817469 | 3.244280e-52 | -8.615850e-47 |
| Msa0189320 | Msa1391410 | 0.866074 | 3.717929e-65 | -8.615850e-47 |
| Msa0189320 | Msa1393570 | 0.829390 | 5.287102e-55 | -8.615850e-47 |
| Msa0189320 | Msa1400870 | -0.829306 | 5.542510e-55 | -8.615850e-47 |
| Msa0189320 | Msa1403680 | 0.812196 | 4.788365e-51 | -8.615850e-47 |
| Msa0189320 | Msa1405310 | 0.853984 | 1.664934e-61 | -8.615850e-47 |
| Msa0189320 | Msa1412640 | 0.801806 | 7.566698e-49 | -8.615850e-47 |
| Msa0189320 | Msa1419690 | 0.808267 | 3.369061e-50 | -8.615850e-47 |
| Msa0189320 | Msa1426030 | 0.832760 | 7.862768e-56 | -8.615850e-47 |
| Msa0189320 | Msa1432420 | 0.862887 | 3.685601e-64 | -8.615850e-47 |
| Msa0189320 | Msa1433390 | 0.824255 | 8.910387e-54 | -8.615850e-47 |
| Msa0189320 | Msa1435890 | 0.817933 | 2.550153e-52 | -8.615850e-47 |
| Msa0189320 | Msa1439550 | 0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0189320 | Msa1440950 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa0189320 | Msa1451560 | 0.801006 | 1.103868e-48 | -8.615850e-47 |
| Msa0189320 | Msa1457620 | 0.810078 | 1.378511e-50 | -8.615850e-47 |
| Msa0189320 | Msa1460050 | 0.828828 | 7.234264e-55 | -8.615850e-47 |
| Msa0189320 | Msa1464810 | 0.832915 | 7.195989e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189320 | MtrunA17_Chr2g0278361 | 97.719 | 263 | 6 | 0 | 1 | 263 | 1 | 263 | 0.0 | 517 |
| Msa0189320 | MtrunA17_Chr2g0278371 | 97.561 | 164 | 4 | 0 | 261 | 424 | 3 | 166 | 4.44e-113 | 328 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189320 | AT1G15200.1 | 60.706 | 425 | 156 | 7 | 1 | 421 | 1 | 418 | 9.30e-154 | 442 |
| Msa0189320 | AT1G15200.2 | 60.000 | 430 | 156 | 8 | 1 | 421 | 1 | 423 | 2.75e-151 | 436 |
| Msa0189320 | AT1G15200.3 | 54.661 | 472 | 156 | 8 | 1 | 421 | 1 | 465 | 4.27e-144 | 419 |
| Msa0189320 | AT1G15200.4 | 56.763 | 414 | 125 | 6 | 1 | 364 | 1 | 410 | 7.86e-139 | 404 |
Find 106 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTGGCGACGGTGTAAA+TGG | 0.197730 | 2_1:+4735085 | Msa0189320:CDS |
| AAGAATGCTGGGTCAGCTTT+TGG | 0.205036 | 2_1:+4735373 | Msa0189320:CDS |
| CCACTTTGGTGAGAATTAAA+AGG | 0.228725 | 2_1:-4735139 | None:intergenic |
| CCAACTCTGATCAGACTCTT+AGG | 0.236456 | 2_1:+4737086 | Msa0189320:intron |
| AAGCTTGGGTCTTCATTCTT+AGG | 0.263540 | 2_1:-4735335 | None:intergenic |
| TCGTGGCGGGCCATTACTTT+AGG | 0.269703 | 2_1:-4738192 | None:intergenic |
| AAGACCCAAGCTTGGTTAAT+AGG | 0.278596 | 2_1:+4735345 | Msa0189320:CDS |
| TGCCAATGTCGAGAAGGATT+TGG | 0.350517 | 2_1:+4737874 | Msa0189320:CDS |
| AGAAACTATGGACAAAGAAT+TGG | 0.358572 | 2_1:+4737952 | Msa0189320:CDS |
| TTGTTCCTATTAACCAAGCT+TGG | 0.375958 | 2_1:-4735350 | None:intergenic |
| TCTTCATCCAAGGGCTTGTT+AGG | 0.377589 | 2_1:-4737553 | None:intergenic |
| ACTTTCATCTGCTGTTGTTA+AGG | 0.382044 | 2_1:+4734486 | Msa0189320:CDS |
| TCAGAATTTACAAGAAACTA+TGG | 0.385332 | 2_1:+4737940 | Msa0189320:CDS |
| TGTTCCTATTAACCAAGCTT+GGG | 0.386465 | 2_1:-4735349 | None:intergenic |
| TCTTCATTATTGCTTCCGTC+AGG | 0.395037 | 2_1:-4738016 | None:intergenic |
| GATGAGTTAGATGATGATTC+TGG | 0.398301 | 2_1:+4738091 | Msa0189320:CDS |
| CACTGCTGACAGATATCAAT+GGG | 0.407443 | 2_1:+4734083 | Msa0189320:exon |
| AATTGGAGTTACTGTTTCTT+CGG | 0.408862 | 2_1:+4737140 | Msa0189320:CDS |
| TAGATGATGATTCTGGTAGA+AGG | 0.416825 | 2_1:+4738098 | Msa0189320:CDS |
| GATGAAAGTCTCCGTTTAGC+AGG | 0.424796 | 2_1:-4734472 | None:intergenic |
| AATGGTAACAAGTCTTTGTA+TGG | 0.425566 | 2_1:-4738474 | None:intergenic |
| TGGGAATGAAGGTTGGTGAT+GGG | 0.439260 | 2_1:+4735023 | Msa0189320:intron |
| TCTCGACATTGGCAAGATAC+TGG | 0.446496 | 2_1:-4737865 | None:intergenic |
| CTGTCTGAGGATGCTGATGC+TGG | 0.449149 | 2_1:+4735049 | Msa0189320:CDS |
| TTGGGAATGAAGGTTGGTGA+TGG | 0.450428 | 2_1:+4735022 | Msa0189320:intron |
| TTGTAGTTTATCCCTTGCTA+TGG | 0.451136 | 2_1:+4738249 | Msa0189320:three_prime_UTR |
| ATATGCAGGATTTCCTTGAA+TGG | 0.461808 | 2_1:+4737792 | Msa0189320:intron |
| ACAAAGAATTGGATACTCAT+AGG | 0.467181 | 2_1:+4737963 | Msa0189320:CDS |
| AAGATCAACCTCCTGCTAAA+CGG | 0.472285 | 2_1:+4734461 | Msa0189320:CDS |
| CTATTTGCCTAACAAGCCCT+TGG | 0.473535 | 2_1:+4737546 | Msa0189320:CDS |
| TAATAGGAACAAAAGAATGC+TGG | 0.474916 | 2_1:+4735361 | Msa0189320:CDS |
| AAACTCACGTGACGAACAAA+GGG | 0.476069 | 2_1:-4734342 | None:intergenic |
| CAACTGGCGACGGTGTAAAT+GGG | 0.478755 | 2_1:+4735086 | Msa0189320:CDS |
| GGGAATGAAGGTTGGTGATG+GGG | 0.483415 | 2_1:+4735024 | Msa0189320:intron |
| GGAAACACAAAGGATTCAAC+TGG | 0.488309 | 2_1:+4735070 | Msa0189320:CDS |
| CTCGGAACATGTACTGTAGT+AGG | 0.494684 | 2_1:-4735305 | None:intergenic |
| CAGCATGATATGCATTGAAA+GGG | 0.495548 | 2_1:+4734017 | None:intergenic |
| TAAGACAGAAGAAAAGCAAT+TGG | 0.497515 | 2_1:+4737123 | Msa0189320:CDS |
| CCACTGCTGACAGATATCAA+TGG | 0.498037 | 2_1:+4734082 | Msa0189320:exon |
| TAACAAGTCTTTGTATGGAC+AGG | 0.499237 | 2_1:-4738469 | None:intergenic |
| CAACTCTGATCAGACTCTTA+GGG | 0.502752 | 2_1:+4737087 | Msa0189320:intron |
| GTTTATCCCTTGCTATGGTT+AGG | 0.503014 | 2_1:+4738254 | Msa0189320:three_prime_UTR |
| CTACCGTTGGTCAGAGTGAT+GGG | 0.506388 | 2_1:+4735113 | Msa0189320:CDS |
| AAGGAAGACAAGCAACTCTC+AGG | 0.514836 | 2_1:+4735571 | Msa0189320:CDS |
| CTCTTCTAGACAATCCACTT+TGG | 0.526100 | 2_1:-4735153 | None:intergenic |
| CTCCAAATCCTTCTCGACAT+TGG | 0.526542 | 2_1:-4737876 | None:intergenic |
| TTGTTAGGCAAATAGTAGAT+TGG | 0.527744 | 2_1:-4737538 | None:intergenic |
| AATGGGGAGTACTGCGGCGG+CGG | 0.528494 | 2_1:+4734100 | Msa0189320:exon |
| TTAGGCAAATAGTAGATTGG+AGG | 0.532407 | 2_1:-4737535 | None:intergenic |
| TGGAGTTACTGTTTCTTCGG+TGG | 0.533767 | 2_1:+4737143 | Msa0189320:CDS |
| GACACGTCTTCTTCATCCAA+GGG | 0.533999 | 2_1:-4737562 | None:intergenic |
| GAAACTCACGTGACGAACAA+AGG | 0.534311 | 2_1:-4734343 | None:intergenic |
| GGGAAGAAAGTGAAAGGCTC+AGG | 0.534722 | 2_1:+4736930 | Msa0189320:CDS |
| GCTACCGTTGGTCAGAGTGA+TGG | 0.537876 | 2_1:+4735112 | Msa0189320:CDS |
| CTTCATTATTGCTTCCGTCA+GGG | 0.541208 | 2_1:-4738015 | None:intergenic |
| TGGTGATGGGGAGCTGTCTG+AGG | 0.541724 | 2_1:+4735036 | Msa0189320:CDS |
| AATAGGAACAAAAGAATGCT+GGG | 0.549273 | 2_1:+4735362 | Msa0189320:CDS |
| ACATTATCAGTAGCAGCTGC+AGG | 0.554611 | 2_1:-4738166 | None:intergenic |
| CAGTTATCAAAGAAATTCAA+TGG | 0.555332 | 2_1:+4735177 | Msa0189320:CDS |
| GTTGGCGAATCGAATTGTTA+CGG | 0.556263 | 2_1:-4734317 | None:intergenic |
| TGTTGGAGAGGATGATATGA+TGG | 0.556616 | 2_1:+4738066 | Msa0189320:CDS |
| GATGTGGAAGATATAAATGT+TGG | 0.557283 | 2_1:+4738049 | Msa0189320:CDS |
| TAAGAATGAAGACCCAAGCT+TGG | 0.568208 | 2_1:+4735337 | Msa0189320:CDS |
| AACTAATAAGAGCAAAGAAG+AGG | 0.573040 | 2_1:+4737585 | Msa0189320:CDS |
| GATCCTCGTGGTCTTCGTAA+AGG | 0.573435 | 2_1:+4734273 | Msa0189320:CDS |
| ATCGAATTGTTACGGAGAAG+AGG | 0.575853 | 2_1:-4734309 | None:intergenic |
| TCGAGAAGGATTTGGAGAGA+TGG | 0.581176 | 2_1:+4737882 | Msa0189320:CDS |
| TGACACGTCTTCTTCATCCA+AGG | 0.581305 | 2_1:-4737563 | None:intergenic |
| TGATATCTGTCAGCAGTGGA+AGG | 0.583721 | 2_1:-4734078 | None:intergenic |
| CTAGGCTGAACAAAGAGCAC+GGG | 0.584888 | 2_1:+4736910 | Msa0189320:intron |
| TAATTGATGTGTGTCGTGGC+GGG | 0.590013 | 2_1:-4738205 | None:intergenic |
| ATAATGTAGACCTAAAGTAA+TGG | 0.597645 | 2_1:+4738182 | Msa0189320:CDS |
| GAAAGTCTCCGTTTAGCAGG+AGG | 0.601833 | 2_1:-4734469 | None:intergenic |
| GATTGATGAAACAATTAAGA+CGG | 0.605607 | 2_1:+4738120 | Msa0189320:CDS |
| ACAGAAGCCTAACCATAGCA+AGG | 0.607074 | 2_1:-4738261 | None:intergenic |
| AATGCAAGAAATGCAAGGAA+AGG | 0.607774 | 2_1:+4737908 | Msa0189320:CDS |
| TGAAGATGATGACGATGATG+TGG | 0.609828 | 2_1:+4738033 | Msa0189320:CDS |
| ACTGTACCAGAAATTCAGAA+AGG | 0.616763 | 2_1:+4735552 | Msa0189320:intron |
| GAGCACGGGAAGAAAGTGAA+AGG | 0.618225 | 2_1:+4736924 | Msa0189320:CDS |
| TCAGACTCTTAGGGCACGTG+TGG | 0.619163 | 2_1:+4737096 | Msa0189320:intron |
| TCATTCTTAGGCAATACCCT+CGG | 0.621285 | 2_1:-4735323 | None:intergenic |
| CCTAGGCTGAACAAAGAGCA+CGG | 0.623670 | 2_1:+4736909 | Msa0189320:intron |
| CTACTACAGTACATGTTCCG+AGG | 0.624803 | 2_1:+4735306 | Msa0189320:CDS |
| TACTACAGTACATGTTCCGA+GGG | 0.626419 | 2_1:+4735307 | Msa0189320:CDS |
| AGCAGCTGCAGGATCTGCAG+TGG | 0.627406 | 2_1:-4738155 | None:intergenic |
| CAGAAGCCTAACCATAGCAA+GGG | 0.628560 | 2_1:-4738260 | None:intergenic |
| GGCAGAATGCAAGAAATGCA+AGG | 0.632033 | 2_1:+4737903 | Msa0189320:CDS |
| GTAAATGGGAATGCTACCGT+TGG | 0.634713 | 2_1:+4735100 | Msa0189320:CDS |
| ATAATTGATGTGTGTCGTGG+CGG | 0.634918 | 2_1:-4738206 | None:intergenic |
| GTATCTTGCCAATGTCGAGA+AGG | 0.637469 | 2_1:+4737868 | Msa0189320:CDS |
| GATACTCATAGGCTCGAGCA+TGG | 0.640754 | 2_1:+4737974 | Msa0189320:CDS |
| CCATTGATATCTGTCAGCAG+TGG | 0.645093 | 2_1:-4734082 | None:intergenic |
| CGTGACGAACAAAGGGACGT+TGG | 0.649597 | 2_1:-4734335 | None:intergenic |
| ACAAAGGATTCAACTGGCGA+CGG | 0.655809 | 2_1:+4735076 | Msa0189320:CDS |
| CTTCCCATCACTCTGACCAA+CGG | 0.662261 | 2_1:-4735116 | None:intergenic |
| GGAAGATATAAATGTTGGAG+AGG | 0.663384 | 2_1:+4738054 | Msa0189320:CDS |
| ACTTCTTCGTCAACAACGCG+AGG | 0.664591 | 2_1:+4734160 | Msa0189320:CDS |
| TTTGAATTCAGATAACTGAG+AGG | 0.666122 | 2_1:+4734244 | Msa0189320:intron |
| ATCAATGGGGAGTACTGCGG+CGG | 0.666208 | 2_1:+4734097 | Msa0189320:exon |
| TGCTGATGCTGGAAACACAA+AGG | 0.667782 | 2_1:+4735060 | Msa0189320:CDS |
| GATATCAATGGGGAGTACTG+CGG | 0.681442 | 2_1:+4734094 | Msa0189320:exon |
| TGAATAATTGATGTGTGTCG+TGG | 0.687769 | 2_1:-4738209 | None:intergenic |
| CAAGCAACTCTCAGGAACAG+AGG | 0.688540 | 2_1:+4735579 | Msa0189320:CDS |
| GAGAGGCTTCGAGATCCTCG+TGG | 0.698160 | 2_1:+4734261 | Msa0189320:CDS |
| GCACCTTTACGAAGACCACG+AGG | 0.748381 | 2_1:-4734276 | None:intergenic |
| ACTGCTGACAGATATCAATG+GGG | 0.806650 | 2_1:+4734084 | Msa0189320:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTTTTTATTTTCATTA+TGG | + | chr2_1:4734826-4734845 | Msa0189320:intron | 10.0% |
| !! | AAGAATCTTAATATTAAAAT+GGG | - | chr2_1:4735652-4735671 | None:intergenic | 10.0% |
| !!! | ATATTAAAAACATTTGTTAA+TGG | - | chr2_1:4737048-4737067 | None:intergenic | 10.0% |
| !!! | ATGGATTTGTTTTTTTAATT+AGG | + | chr2_1:4734417-4734436 | Msa0189320:intron | 15.0% |
| !!! | TGGATTTGTTTTTTTAATTA+GGG | + | chr2_1:4734418-4734437 | Msa0189320:intron | 15.0% |
| !! | GAAGAATCTTAATATTAAAA+TGG | - | chr2_1:4735653-4735672 | None:intergenic | 15.0% |
| !! | AAAATTGATAAAATTATGCT+TGG | + | chr2_1:4735809-4735828 | Msa0189320:intron | 15.0% |
| !! | AACATGTATAAATTGATATT+TGG | + | chr2_1:4735983-4736002 | Msa0189320:intron | 15.0% |
| !! | ACATGTATAAATTGATATTT+GGG | + | chr2_1:4735984-4736003 | Msa0189320:intron | 15.0% |
| !!! | ATCATATTTGAAATTTAACA+GGG | - | chr2_1:4737693-4737712 | None:intergenic | 15.0% |
| !!! | TATCATATTTGAAATTTAAC+AGG | - | chr2_1:4737694-4737713 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTTTTAATTAGGG+TGG | + | chr2_1:4734421-4734440 | Msa0189320:intron | 20.0% |
| !! | ACTTGTAAATCAAAATTAAG+TGG | - | chr2_1:4734524-4734543 | None:intergenic | 20.0% |
| !!! | TGTAATGTTTGATGATTTAA+GGG | + | chr2_1:4734589-4734608 | Msa0189320:intron | 20.0% |
| !!! | TGTTTGTTACAGATTAAATT+TGG | + | chr2_1:4734613-4734632 | Msa0189320:intron | 20.0% |
| !! | TACAAAATAACTTATGTGTA+TGG | + | chr2_1:4734702-4734721 | Msa0189320:intron | 20.0% |
| !! | GAATTTAAGCTATAACAAAT+AGG | - | chr2_1:4734801-4734820 | None:intergenic | 20.0% |
| !!! | TTTTAACTGTATATCTTGTT+TGG | + | chr2_1:4735003-4735022 | Msa0189320:intron | 20.0% |
| !!! | TTTAACTGTATATCTTGTTT+GGG | + | chr2_1:4735004-4735023 | Msa0189320:intron | 20.0% |
| !! | AGAAAAATATAAGTGTATAG+AGG | - | chr2_1:4735522-4735541 | None:intergenic | 20.0% |
| !! | TCAAATAACATCAATCAATA+AGG | - | chr2_1:4735842-4735861 | None:intergenic | 20.0% |
| !! | CAATCTAAAAAAGTTAGTAA+GGG | - | chr2_1:4736228-4736247 | None:intergenic | 20.0% |
| !! | TCAATCTAAAAAAGTTAGTA+AGG | - | chr2_1:4736229-4736248 | None:intergenic | 20.0% |
| !! | TGATAAGTCTAATTGAAAAA+CGG | - | chr2_1:4736467-4736486 | None:intergenic | 20.0% |
| !! | TGATAAGTCTAATTGAAAAA+CGG | - | chr2_1:4736467-4736486 | None:intergenic | 20.0% |
| !!! | AAAGACTAAGCAATTTTATA+AGG | + | chr2_1:4737179-4737198 | Msa0189320:CDS | 20.0% |
| !!! | AAGTTTTTCTTTGATCTTTT+TGG | + | chr2_1:4737469-4737488 | Msa0189320:intron | 20.0% |
| !!! | AGTTTTTCTTTGATCTTTTT+GGG | + | chr2_1:4737470-4737489 | Msa0189320:intron | 20.0% |
| !!! | ACTTTTTGTCTTTGTATTTT+TGG | + | chr2_1:4738334-4738353 | Msa0189320:three_prime_UTR | 20.0% |
| !!! | CTTTTTGTCTTTGTATTTTT+GGG | + | chr2_1:4738335-4738354 | Msa0189320:three_prime_UTR | 20.0% |
| !!! | TCTTTCCGTTTTTGTTAATT+AGG | + | chr2_1:4734364-4734383 | Msa0189320:intron | 25.0% |
| !!! | CTTTCCGTTTTTGTTAATTA+GGG | + | chr2_1:4734365-4734384 | Msa0189320:intron | 25.0% |
| ! | TGAACCCTAATTAACAAAAA+CGG | - | chr2_1:4734372-4734391 | None:intergenic | 25.0% |
| ! | TTACACTTCAATTGAGTTTA+TGG | + | chr2_1:4734398-4734417 | Msa0189320:intron | 25.0% |
| !! | GTGTAATGTTTGATGATTTA+AGG | + | chr2_1:4734588-4734607 | Msa0189320:intron | 25.0% |
| ! | AAAAGAAGTGAATTTCTCTA+TGG | + | chr2_1:4734671-4734690 | Msa0189320:intron | 25.0% |
| ! | TGCAATTGTCTGATAATTTA+AGG | + | chr2_1:4734748-4734767 | Msa0189320:intron | 25.0% |
| ! | GCAATTGTCTGATAATTTAA+GGG | + | chr2_1:4734749-4734768 | Msa0189320:intron | 25.0% |
| ! | AAACAAACTCAGAATAGTTA+TGG | + | chr2_1:4734850-4734869 | Msa0189320:intron | 25.0% |
| ! | CAGTTATCAAAGAAATTCAA+TGG | + | chr2_1:4735177-4735196 | Msa0189320:CDS | 25.0% |
| ! | ATAATCATCATTCATCAAGA+AGG | - | chr2_1:4735226-4735245 | None:intergenic | 25.0% |
| ! | TCTTGATGAATGATGATTAT+TGG | + | chr2_1:4735226-4735245 | Msa0189320:intron | 25.0% |
| ! | ATGTATGTTAGTTGATTACT+TGG | + | chr2_1:4735409-4735428 | Msa0189320:intron | 25.0% |
| ! | ATTAGGTTTAACAACACAAA+TGG | - | chr2_1:4735715-4735734 | None:intergenic | 25.0% |
| ! | CTAAATATCCTTAAACAAAG+TGG | - | chr2_1:4735766-4735785 | None:intergenic | 25.0% |
| !! | ATTTTATCAATTTTCAGTGC+AGG | - | chr2_1:4735803-4735822 | None:intergenic | 25.0% |
| ! | ATGTACATAAAGAAACACTT+AGG | - | chr2_1:4736084-4736103 | None:intergenic | 25.0% |
| ! | TCTTCAACTGTAAATTTATG+AGG | + | chr2_1:4737209-4737228 | Msa0189320:intron | 25.0% |
| !! | AACAAACTAGTGAAACATTT+TGG | - | chr2_1:4737252-4737271 | None:intergenic | 25.0% |
| !!! | CTGCAGGTTATTTTTATTTT+TGG | + | chr2_1:4737321-4737340 | Msa0189320:intron | 25.0% |
| ! | GTCTCAATAAAATGTGAATA+TGG | - | chr2_1:4737358-4737377 | None:intergenic | 25.0% |
| !! | TTGATTGAATGTAATTTTGC+AGG | + | chr2_1:4737500-4737519 | Msa0189320:intron | 25.0% |
| ! | TCTGAGTATCAAAAACAAAT+TGG | + | chr2_1:4737839-4737858 | Msa0189320:CDS | 25.0% |
| ! | CTGAGTATCAAAAACAAATT+GGG | + | chr2_1:4737840-4737859 | Msa0189320:CDS | 25.0% |
| ! | TGAGTATCAAAAACAAATTG+GGG | + | chr2_1:4737841-4737860 | Msa0189320:CDS | 25.0% |
| ! | TCAGAATTTACAAGAAACTA+TGG | + | chr2_1:4737940-4737959 | Msa0189320:CDS | 25.0% |
| ! | GATTGATGAAACAATTAAGA+CGG | + | chr2_1:4738120-4738139 | Msa0189320:CDS | 25.0% |
| ! | ATAATGTAGACCTAAAGTAA+TGG | + | chr2_1:4738182-4738201 | Msa0189320:CDS | 25.0% |
| !!! | TTTGCTGTATTTGTTTTTCT+AGG | + | chr2_1:4738413-4738432 | Msa0189320:three_prime_UTR | 25.0% |
| !!! | TTGCTGTATTTGTTTTTCTA+GGG | + | chr2_1:4738414-4738433 | Msa0189320:three_prime_UTR | 25.0% |
| TTTGAATTCAGATAACTGAG+AGG | + | chr2_1:4734244-4734263 | Msa0189320:intron | 30.0% | |
| TTGTCTGATAATTTAAGGGA+TGG | + | chr2_1:4734753-4734772 | Msa0189320:intron | 30.0% | |
| TGTCTGATAATTTAAGGGAT+GGG | + | chr2_1:4734754-4734773 | Msa0189320:intron | 30.0% | |
| GGCTGTTATAGCTTAAATTA+AGG | + | chr2_1:4734775-4734794 | Msa0189320:intron | 30.0% | |
| ! | TATATCTTGTTTGGGAATGA+AGG | + | chr2_1:4735012-4735031 | Msa0189320:intron | 30.0% |
| ! | AAGCTTTGTATCTAATGCTA+TGG | + | chr2_1:4735253-4735272 | Msa0189320:intron | 30.0% |
| TAATAGGAACAAAAGAATGC+TGG | + | chr2_1:4735361-4735380 | Msa0189320:CDS | 30.0% | |
| AATAGGAACAAAAGAATGCT+GGG | + | chr2_1:4735362-4735381 | Msa0189320:CDS | 30.0% | |
| ATATAAGTGTATAGAGGAGA+GGG | - | chr2_1:4735516-4735535 | None:intergenic | 30.0% | |
| AATATAAGTGTATAGAGGAG+AGG | - | chr2_1:4735517-4735536 | None:intergenic | 30.0% | |
| ATTCTTCCTATTGAAGAAGT+TGG | + | chr2_1:4735666-4735685 | Msa0189320:intron | 30.0% | |
| TTAACAACACAAATGGCTAT+AGG | - | chr2_1:4735708-4735727 | None:intergenic | 30.0% | |
| TATTGTCAAGTGTATGCATT+AGG | - | chr2_1:4735732-4735751 | None:intergenic | 30.0% | |
| ! | CACTTAATCCACTTTGTTTA+AGG | + | chr2_1:4735755-4735774 | Msa0189320:intron | 30.0% |
| ACATCAATCAATAAGGACAA+TGG | - | chr2_1:4735835-4735854 | None:intergenic | 30.0% | |
| TTGATGAATACATCATTGTC+TGG | + | chr2_1:4735891-4735910 | Msa0189320:intron | 30.0% | |
| TGCACAAGATCAATATGTTA+AGG | + | chr2_1:4736157-4736176 | Msa0189320:intron | 30.0% | |
| ! | ACTTTGATAGCCAATTGTAT+AGG | - | chr2_1:4736285-4736304 | None:intergenic | 30.0% |
| GATTGCATACAATCTTAAGA+TGG | + | chr2_1:4736323-4736342 | Msa0189320:intron | 30.0% | |
| ATCTTAAGATGGATGATAGT+TGG | + | chr2_1:4736334-4736353 | Msa0189320:intron | 30.0% | |
| TCTTAAGATGGATGATAGTT+GGG | + | chr2_1:4736335-4736354 | Msa0189320:intron | 30.0% | |
| ATTGCAAGCACAGTAATAAA+TGG | - | chr2_1:4736496-4736515 | None:intergenic | 30.0% | |
| ATTTCGAGCTTCAAATAGAA+GGG | - | chr2_1:4736526-4736545 | None:intergenic | 30.0% | |
| TATTTCGAGCTTCAAATAGA+AGG | - | chr2_1:4736527-4736546 | None:intergenic | 30.0% | |
| ATTGCAAGCACAGTAATAAA+TGG | - | chr2_1:4736496-4736515 | None:intergenic | 30.0% | |
| ATTTCGAGCTTCAAATAGAA+GGG | - | chr2_1:4736526-4736545 | None:intergenic | 30.0% | |
| TATTTCGAGCTTCAAATAGA+AGG | - | chr2_1:4736527-4736546 | None:intergenic | 30.0% | |
| TTCTTTGCAGAGTTTCATTA+TGG | + | chr2_1:4737020-4737039 | Msa0189320:intron | 30.0% | |
| TAAGACAGAAGAAAAGCAAT+TGG | + | chr2_1:4737123-4737142 | Msa0189320:CDS | 30.0% | |
| ! | AATTGGAGTTACTGTTTCTT+CGG | + | chr2_1:4737140-4737159 | Msa0189320:CDS | 30.0% |
| ! | AATGTGAATATGGACACTTT+TGG | - | chr2_1:4737348-4737367 | None:intergenic | 30.0% |
| ! | TATTGAAGCAATTTGATGAC+TGG | + | chr2_1:4737409-4737428 | Msa0189320:intron | 30.0% |
| TTGTTAGGCAAATAGTAGAT+TGG | - | chr2_1:4737541-4737560 | None:intergenic | 30.0% | |
| AACTAATAAGAGCAAAGAAG+AGG | + | chr2_1:4737585-4737604 | Msa0189320:CDS | 30.0% | |
| ! | TTCTTGCATTTTTCCATTCA+AGG | - | chr2_1:4737808-4737827 | None:intergenic | 30.0% |
| AGAAACTATGGACAAAGAAT+TGG | + | chr2_1:4737952-4737971 | Msa0189320:CDS | 30.0% | |
| ACAAAGAATTGGATACTCAT+AGG | + | chr2_1:4737963-4737982 | Msa0189320:CDS | 30.0% | |
| ! | TCAGGGATTTTTCTTTTCTT+GGG | - | chr2_1:4738001-4738020 | None:intergenic | 30.0% |
| AAGAAAAGAAAAATCCCTGA+CGG | + | chr2_1:4738001-4738020 | Msa0189320:CDS | 30.0% | |
| GATGTGGAAGATATAAATGT+TGG | + | chr2_1:4738049-4738068 | Msa0189320:CDS | 30.0% | |
| CTATATTCATACTCTCTCTC+TGG | + | chr2_1:4734192-4734211 | Msa0189320:intron | 35.0% | |
| ACTTTCATCTGCTGTTGTTA+AGG | + | chr2_1:4734486-4734505 | Msa0189320:CDS | 35.0% | |
| ! | TTTTCCCCTTTGTGGTTTAA+GGG | - | chr2_1:4734971-4734990 | None:intergenic | 35.0% |
| CCACTTTGGTGAGAATTAAA+AGG | - | chr2_1:4735142-4735161 | None:intergenic | 35.0% | |
| !! | CCTTTTAATTCTCACCAAAG+TGG | + | chr2_1:4735139-4735158 | Msa0189320:CDS | 35.0% |
| TGTTCCTATTAACCAAGCTT+GGG | - | chr2_1:4735352-4735371 | None:intergenic | 35.0% | |
| TTGTTCCTATTAACCAAGCT+TGG | - | chr2_1:4735353-4735372 | None:intergenic | 35.0% | |
| ACTGTACCAGAAATTCAGAA+AGG | + | chr2_1:4735552-4735571 | Msa0189320:intron | 35.0% | |
| TGTCTTCCTTTCTGAATTTC+TGG | - | chr2_1:4735561-4735580 | None:intergenic | 35.0% | |
| TCACAACCAACTTCTTCAAT+AGG | - | chr2_1:4735675-4735694 | None:intergenic | 35.0% | |
| ! | TATTGAAGAAGTTGGTTGTG+AGG | + | chr2_1:4735674-4735693 | Msa0189320:intron | 35.0% |
| TGAAATCTCTCGTAAAGACT+TGG | + | chr2_1:4735859-4735878 | Msa0189320:intron | 35.0% | |
| ! | TTTGGGACTTCTATTTAAGC+AGG | + | chr2_1:4736001-4736020 | Msa0189320:intron | 35.0% |
| CTTCTATTTAAGCAGGATTC+AGG | + | chr2_1:4736008-4736027 | Msa0189320:intron | 35.0% | |
| TATTTAAGCAGGATTCAGGA+GGG | + | chr2_1:4736012-4736031 | Msa0189320:intron | 35.0% | |
| TAAAGAAACACTTAGGCATG+CGG | - | chr2_1:4736077-4736096 | None:intergenic | 35.0% | |
| ! | TTGATAGCCAATTGTATAGG+TGG | - | chr2_1:4736282-4736301 | None:intergenic | 35.0% |
| TTGGGATTACAAATTCCGAA+CGG | + | chr2_1:4736353-4736372 | Msa0189320:intron | 35.0% | |
| TAACATGCTTGTTCGAACTA+TGG | - | chr2_1:4736395-4736414 | None:intergenic | 35.0% | |
| TTACTGTGCTTGCAATTTCT+AGG | + | chr2_1:4736500-4736519 | Msa0189320:intron | 35.0% | |
| AAGATAGAGAGAAGACAAAG+TGG | - | chr2_1:4736560-4736579 | None:intergenic | 35.0% | |
| ! | TTCAGGGTATTATGAAGCTT+TGG | - | chr2_1:4736599-4736618 | None:intergenic | 35.0% |
| TAACATGCTTGTTCGAACTA+TGG | - | chr2_1:4736395-4736414 | None:intergenic | 35.0% | |
| TTACTGTGCTTGCAATTTCT+AGG | + | chr2_1:4736500-4736519 | Msa0189320:intron | 35.0% | |
| AAGATAGAGAGAAGACAAAG+TGG | - | chr2_1:4736560-4736579 | None:intergenic | 35.0% | |
| ! | TTCAGGGTATTATGAAGCTT+TGG | - | chr2_1:4736599-4736618 | None:intergenic | 35.0% |
| TTAGGCAAATAGTAGATTGG+AGG | - | chr2_1:4737538-4737557 | None:intergenic | 35.0% | |
| AAGAAGAGGTAGTCAAACTT+AGG | + | chr2_1:4737599-4737618 | Msa0189320:intron | 35.0% | |
| TGTTCATCTTTGCAATATGC+AGG | + | chr2_1:4737778-4737797 | Msa0189320:intron | 35.0% | |
| ATATGCAGGATTTCCTTGAA+TGG | + | chr2_1:4737792-4737811 | Msa0189320:intron | 35.0% | |
| ATGGAAAAATGCAAGAAGAG+AGG | + | chr2_1:4737811-4737830 | Msa0189320:CDS | 35.0% | |
| AATGCAAGAAATGCAAGGAA+AGG | + | chr2_1:4737908-4737927 | Msa0189320:CDS | 35.0% | |
| ! | GTCAGGGATTTTTCTTTTCT+TGG | - | chr2_1:4738002-4738021 | None:intergenic | 35.0% |
| GGAAGATATAAATGTTGGAG+AGG | + | chr2_1:4738054-4738073 | Msa0189320:CDS | 35.0% | |
| GATGAGTTAGATGATGATTC+TGG | + | chr2_1:4738091-4738110 | Msa0189320:CDS | 35.0% | |
| TAGATGATGATTCTGGTAGA+AGG | + | chr2_1:4738098-4738117 | Msa0189320:CDS | 35.0% | |
| TGAATAATTGATGTGTGTCG+TGG | - | chr2_1:4738212-4738231 | None:intergenic | 35.0% | |
| TTGTAGTTTATCCCTTGCTA+TGG | + | chr2_1:4738249-4738268 | Msa0189320:three_prime_UTR | 35.0% | |
| CACTGCTGACAGATATCAAT+GGG | + | chr2_1:4734083-4734102 | Msa0189320:exon | 40.0% | |
| ACTGCTGACAGATATCAATG+GGG | + | chr2_1:4734084-4734103 | Msa0189320:exon | 40.0% | |
| ATCGAATTGTTACGGAGAAG+AGG | - | chr2_1:4734312-4734331 | None:intergenic | 40.0% | |
| GTTGGCGAATCGAATTGTTA+CGG | - | chr2_1:4734320-4734339 | None:intergenic | 40.0% | |
| AAACTCACGTGACGAACAAA+GGG | - | chr2_1:4734345-4734364 | None:intergenic | 40.0% | |
| AAGATCAACCTCCTGCTAAA+CGG | + | chr2_1:4734461-4734480 | Msa0189320:CDS | 40.0% | |
| ! | GTTTTCCCCTTTGTGGTTTA+AGG | - | chr2_1:4734972-4734991 | None:intergenic | 40.0% |
| ! | TCTTGTTTGGGAATGAAGGT+TGG | + | chr2_1:4735016-4735035 | Msa0189320:intron | 40.0% |
| GGAAACACAAAGGATTCAAC+TGG | + | chr2_1:4735070-4735089 | Msa0189320:CDS | 40.0% | |
| CTCTTCTAGACAATCCACTT+TGG | - | chr2_1:4735156-4735175 | None:intergenic | 40.0% | |
| TATGGTCTGTTCTTCATGTC+AGG | + | chr2_1:4735271-4735290 | Msa0189320:intron | 40.0% | |
| TACTACAGTACATGTTCCGA+GGG | + | chr2_1:4735307-4735326 | Msa0189320:CDS | 40.0% | |
| TCATTCTTAGGCAATACCCT+CGG | - | chr2_1:4735326-4735345 | None:intergenic | 40.0% | |
| AAGCTTGGGTCTTCATTCTT+AGG | - | chr2_1:4735338-4735357 | None:intergenic | 40.0% | |
| TAAGAATGAAGACCCAAGCT+TGG | + | chr2_1:4735337-4735356 | Msa0189320:CDS | 40.0% | |
| AAGACCCAAGCTTGGTTAAT+AGG | + | chr2_1:4735345-4735364 | Msa0189320:CDS | 40.0% | |
| TGATATGTCCTTGTACTCGT+TGG | + | chr2_1:4735945-4735964 | Msa0189320:intron | 40.0% | |
| GAAATCTACCAACGAGTACA+AGG | - | chr2_1:4735956-4735975 | None:intergenic | 40.0% | |
| ! | ACTCGTTGGTAGATTTCGAT+AGG | + | chr2_1:4735959-4735978 | Msa0189320:intron | 40.0% |
| CTATTTAAGCAGGATTCAGG+AGG | + | chr2_1:4736011-4736030 | Msa0189320:intron | 40.0% | |
| ! | TGAAAATAAGGGCTGGCAAA+GGG | - | chr2_1:4736190-4736209 | None:intergenic | 40.0% |
| GGGCAAACAACTTAATAGGA+GGG | - | chr2_1:4736257-4736276 | None:intergenic | 40.0% | |
| TGGGCAAACAACTTAATAGG+AGG | - | chr2_1:4736258-4736277 | None:intergenic | 40.0% | |
| GGTTGGGCAAACAACTTAAT+AGG | - | chr2_1:4736261-4736280 | None:intergenic | 40.0% | |
| AGCCAATTGTATAGGTGGTT+GGG | - | chr2_1:4736277-4736296 | None:intergenic | 40.0% | |
| TAGCCAATTGTATAGGTGGT+TGG | - | chr2_1:4736278-4736297 | None:intergenic | 40.0% | |
| AGTTCGAACAAGCATGTTAC+AGG | + | chr2_1:4736396-4736415 | Msa0189320:intron | 40.0% | |
| ! | ACAAAGAGCATGTTTCCGAA+CGG | + | chr2_1:4736636-4736655 | Msa0189320:intron | 40.0% |
| AGTTCGAACAAGCATGTTAC+AGG | + | chr2_1:4736396-4736415 | Msa0189320:intron | 40.0% | |
| GCGAACAGATTGCTGAAAAA+CGG | + | chr2_1:4736963-4736982 | Msa0189320:CDS | 40.0% | |
| AACAGATTGCTGAAAAACGG+AGG | + | chr2_1:4736966-4736985 | Msa0189320:CDS | 40.0% | |
| CTAAGAGTCTGATCAGAGTT+GGG | - | chr2_1:4737088-4737107 | None:intergenic | 40.0% | |
| CAACTCTGATCAGACTCTTA+GGG | + | chr2_1:4737087-4737106 | Msa0189320:intron | 40.0% | |
| CTTCATTATTGCTTCCGTCA+GGG | - | chr2_1:4738018-4738037 | None:intergenic | 40.0% | |
| TCTTCATTATTGCTTCCGTC+AGG | - | chr2_1:4738019-4738038 | None:intergenic | 40.0% | |
| ! | TGAAGATGATGACGATGATG+TGG | + | chr2_1:4738033-4738052 | Msa0189320:CDS | 40.0% |
| TGTTGGAGAGGATGATATGA+TGG | + | chr2_1:4738066-4738085 | Msa0189320:CDS | 40.0% | |
| ATAATTGATGTGTGTCGTGG+CGG | - | chr2_1:4738209-4738228 | None:intergenic | 40.0% | |
| ! | GTTTATCCCTTGCTATGGTT+AGG | + | chr2_1:4738254-4738273 | Msa0189320:three_prime_UTR | 40.0% |
| TGATATCTGTCAGCAGTGGA+AGG | - | chr2_1:4734081-4734100 | None:intergenic | 45.0% | |
| CCATTGATATCTGTCAGCAG+TGG | - | chr2_1:4734085-4734104 | None:intergenic | 45.0% | |
| CCACTGCTGACAGATATCAA+TGG | + | chr2_1:4734082-4734101 | Msa0189320:exon | 45.0% | |
| !! | GATATCAATGGGGAGTACTG+CGG | + | chr2_1:4734094-4734113 | Msa0189320:exon | 45.0% |
| GAAACTCACGTGACGAACAA+AGG | - | chr2_1:4734346-4734365 | None:intergenic | 45.0% | |
| GATGAAAGTCTCCGTTTAGC+AGG | - | chr2_1:4734475-4734494 | None:intergenic | 45.0% | |
| TTGTGGTTTAAGGGTCAGGA+AGG | - | chr2_1:4734962-4734981 | None:intergenic | 45.0% | |
| TCCTGACCCTTAAACCACAA+AGG | + | chr2_1:4734962-4734981 | Msa0189320:intron | 45.0% | |
| CCTGACCCTTAAACCACAAA+GGG | + | chr2_1:4734963-4734982 | Msa0189320:intron | 45.0% | |
| CTGACCCTTAAACCACAAAG+GGG | + | chr2_1:4734964-4734983 | Msa0189320:intron | 45.0% | |
| ! | CACTTCTGTTTTCCCCTTTG+TGG | - | chr2_1:4734979-4734998 | None:intergenic | 45.0% |
| !! | TTGGGAATGAAGGTTGGTGA+TGG | + | chr2_1:4735022-4735041 | Msa0189320:intron | 45.0% |
| !! | TGGGAATGAAGGTTGGTGAT+GGG | + | chr2_1:4735023-4735042 | Msa0189320:intron | 45.0% |
| TGCTGATGCTGGAAACACAA+AGG | + | chr2_1:4735060-4735079 | Msa0189320:CDS | 45.0% | |
| ACAAAGGATTCAACTGGCGA+CGG | + | chr2_1:4735076-4735095 | Msa0189320:CDS | 45.0% | |
| GTAAATGGGAATGCTACCGT+TGG | + | chr2_1:4735100-4735119 | Msa0189320:CDS | 45.0% | |
| CTCGGAACATGTACTGTAGT+AGG | - | chr2_1:4735308-4735327 | None:intergenic | 45.0% | |
| CTACTACAGTACATGTTCCG+AGG | + | chr2_1:4735306-4735325 | Msa0189320:CDS | 45.0% | |
| ! | AAGAATGCTGGGTCAGCTTT+TGG | + | chr2_1:4735373-4735392 | Msa0189320:CDS | 45.0% |
| ! | AGAATGCTGGGTCAGCTTTT+GGG | + | chr2_1:4735374-4735393 | Msa0189320:CDS | 45.0% |
| AAGGAAGACAAGCAACTCTC+AGG | + | chr2_1:4735571-4735590 | Msa0189320:CDS | 45.0% | |
| ! | CTGAAAATAAGGGCTGGCAA+AGG | - | chr2_1:4736191-4736210 | None:intergenic | 45.0% |
| !!! | CTTTGCCAGCCCTTATTTTC+AGG | + | chr2_1:4736189-4736208 | Msa0189320:intron | 45.0% |
| GCCACTAGGCCTGAAAATAA+GGG | - | chr2_1:4736201-4736220 | None:intergenic | 45.0% | |
| TGCCACTAGGCCTGAAAATA+AGG | - | chr2_1:4736202-4736221 | None:intergenic | 45.0% | |
| TTAGTAAGGGAACTGCCACT+AGG | - | chr2_1:4736215-4736234 | None:intergenic | 45.0% | |
| TGCCCAACCACCTATACAAT+TGG | + | chr2_1:4736272-4736291 | Msa0189320:intron | 45.0% | |
| ATACCCTGAAACTCCTTCCT+AGG | + | chr2_1:4736609-4736628 | Msa0189320:intron | 45.0% | |
| ACATGCTCTTTGTTCAGCCT+AGG | - | chr2_1:4736629-4736648 | None:intergenic | 45.0% | |
| ATACCCTGAAACTCCTTCCT+AGG | + | chr2_1:4736609-4736628 | Msa0189320:intron | 45.0% | |
| AGATTGCTGAAAAACGGAGG+AGG | + | chr2_1:4736969-4736988 | Msa0189320:CDS | 45.0% | |
| GATTGCTGAAAAACGGAGGA+GGG | + | chr2_1:4736970-4736989 | Msa0189320:CDS | 45.0% | |
| CCTAAGAGTCTGATCAGAGT+TGG | - | chr2_1:4737089-4737108 | None:intergenic | 45.0% | |
| CCAACTCTGATCAGACTCTT+AGG | + | chr2_1:4737086-4737105 | Msa0189320:intron | 45.0% | |
| ! | TGGAGTTACTGTTTCTTCGG+TGG | + | chr2_1:4737143-4737162 | Msa0189320:CDS | 45.0% |
| !! | TCACTAGTTTGTTCCACAGC+TGG | + | chr2_1:4737259-4737278 | Msa0189320:intron | 45.0% |
| CAGTAATAGATGTCCAGCTG+TGG | - | chr2_1:4737275-4737294 | None:intergenic | 45.0% | |
| !! | ATAACCTGCAGAGCATTGCA+TGG | - | chr2_1:4737312-4737331 | None:intergenic | 45.0% |
| CTATTTGCCTAACAAGCCCT+TGG | + | chr2_1:4737546-4737565 | Msa0189320:CDS | 45.0% | |
| ! | TCTTCATCCAAGGGCTTGTT+AGG | - | chr2_1:4737556-4737575 | None:intergenic | 45.0% |
| GACACGTCTTCTTCATCCAA+GGG | - | chr2_1:4737565-4737584 | None:intergenic | 45.0% | |
| TGACACGTCTTCTTCATCCA+AGG | - | chr2_1:4737566-4737585 | None:intergenic | 45.0% | |
| TCTCGACATTGGCAAGATAC+TGG | - | chr2_1:4737868-4737887 | None:intergenic | 45.0% | |
| GTATCTTGCCAATGTCGAGA+AGG | + | chr2_1:4737868-4737887 | Msa0189320:CDS | 45.0% | |
| TGCCAATGTCGAGAAGGATT+TGG | + | chr2_1:4737874-4737893 | Msa0189320:CDS | 45.0% | |
| CTCCAAATCCTTCTCGACAT+TGG | - | chr2_1:4737879-4737898 | None:intergenic | 45.0% | |
| TCGAGAAGGATTTGGAGAGA+TGG | + | chr2_1:4737882-4737901 | Msa0189320:CDS | 45.0% | |
| GGCAGAATGCAAGAAATGCA+AGG | + | chr2_1:4737903-4737922 | Msa0189320:CDS | 45.0% | |
| ACATTATCAGTAGCAGCTGC+AGG | - | chr2_1:4738169-4738188 | None:intergenic | 45.0% | |
| TAATTGATGTGTGTCGTGGC+GGG | - | chr2_1:4738208-4738227 | None:intergenic | 45.0% | |
| CAGAAGCCTAACCATAGCAA+GGG | - | chr2_1:4738263-4738282 | None:intergenic | 45.0% | |
| ACAGAAGCCTAACCATAGCA+AGG | - | chr2_1:4738264-4738283 | None:intergenic | 45.0% | |
| ACTTCTTCGTCAACAACGCG+AGG | + | chr2_1:4734160-4734179 | Msa0189320:CDS | 50.0% | |
| GATCCTCGTGGTCTTCGTAA+AGG | + | chr2_1:4734273-4734292 | Msa0189320:CDS | 50.0% | |
| GAAAGTCTCCGTTTAGCAGG+AGG | - | chr2_1:4734472-4734491 | None:intergenic | 50.0% | |
| ! | TCAGGAAGGCACATGAGTAG+GGG | - | chr2_1:4734948-4734967 | None:intergenic | 50.0% |
| ! | GTCAGGAAGGCACATGAGTA+GGG | - | chr2_1:4734949-4734968 | None:intergenic | 50.0% |
| CCCTTTGTGGTTTAAGGGTC+AGG | - | chr2_1:4734966-4734985 | None:intergenic | 50.0% | |
| !! | GGGAATGAAGGTTGGTGATG+GGG | + | chr2_1:4735024-4735043 | Msa0189320:intron | 50.0% |
| TCAACTGGCGACGGTGTAAA+TGG | + | chr2_1:4735085-4735104 | Msa0189320:CDS | 50.0% | |
| CAACTGGCGACGGTGTAAAT+GGG | + | chr2_1:4735086-4735105 | Msa0189320:CDS | 50.0% | |
| CTACCGTTGGTCAGAGTGAT+GGG | + | chr2_1:4735113-4735132 | Msa0189320:CDS | 50.0% | |
| CTTCCCATCACTCTGACCAA+CGG | - | chr2_1:4735119-4735138 | None:intergenic | 50.0% | |
| !! | TCAGCTTTTGGGAACTCTGG+AGG | + | chr2_1:4735385-4735404 | Msa0189320:CDS | 50.0% |
| CAAGCAACTCTCAGGAACAG+AGG | + | chr2_1:4735579-4735598 | Msa0189320:CDS | 50.0% | |
| AGAAACACTTAGGCATGCGG+TGG | - | chr2_1:4736074-4736093 | None:intergenic | 50.0% | |
| CTAGGCCTGAAAATAAGGGC+TGG | - | chr2_1:4736197-4736216 | None:intergenic | 50.0% | |
| !!! | GCCCTTATTTTCAGGCCTAG+TGG | + | chr2_1:4736197-4736216 | Msa0189320:intron | 50.0% |
| ! | TCCGAACGGACATGTTTTCG+AGG | + | chr2_1:4736367-4736386 | Msa0189320:intron | 50.0% |
| CCCTCGAAAACATGTCCGTT+CGG | - | chr2_1:4736371-4736390 | None:intergenic | 50.0% | |
| ! | CCGAACGGACATGTTTTCGA+GGG | + | chr2_1:4736368-4736387 | Msa0189320:intron | 50.0% |
| CAGCCTAGGAAGGAGTTTCA+GGG | - | chr2_1:4736615-4736634 | None:intergenic | 50.0% | |
| TCAGCCTAGGAAGGAGTTTC+AGG | - | chr2_1:4736616-4736635 | None:intergenic | 50.0% | |
| GCTCTTTGTTCAGCCTAGGA+AGG | - | chr2_1:4736625-4736644 | None:intergenic | 50.0% | |
| ! | TCCGAACGGACATGTTTTCG+AGG | + | chr2_1:4736367-4736386 | Msa0189320:intron | 50.0% |
| CCCTCGAAAACATGTCCGTT+CGG | - | chr2_1:4736371-4736390 | None:intergenic | 50.0% | |
| ! | CCGAACGGACATGTTTTCGA+GGG | + | chr2_1:4736368-4736387 | Msa0189320:intron | 50.0% |
| CAGCCTAGGAAGGAGTTTCA+GGG | - | chr2_1:4736615-4736634 | None:intergenic | 50.0% | |
| TCAGCCTAGGAAGGAGTTTC+AGG | - | chr2_1:4736616-4736635 | None:intergenic | 50.0% | |
| GCTCTTTGTTCAGCCTAGGA+AGG | - | chr2_1:4736625-4736644 | None:intergenic | 50.0% | |
| CCTAGGCTGAACAAAGAGCA+CGG | + | chr2_1:4736626-4736645 | Msa0189320:intron | 50.0% | |
| ! | CTAGGCTGAACAAAGAGCAC+GGG | + | chr2_1:4736910-4736929 | Msa0189320:intron | 50.0% |
| GAGCACGGGAAGAAAGTGAA+AGG | + | chr2_1:4736924-4736943 | Msa0189320:CDS | 50.0% | |
| GGGAAGAAAGTGAAAGGCTC+AGG | + | chr2_1:4736930-4736949 | Msa0189320:CDS | 50.0% | |
| TGAAAAACGGAGGAGGGACT+TGG | + | chr2_1:4736976-4736995 | Msa0189320:CDS | 50.0% | |
| CATACCATGCAATGCTCTGC+AGG | + | chr2_1:4737305-4737324 | Msa0189320:intron | 50.0% | |
| GATACTCATAGGCTCGAGCA+TGG | + | chr2_1:4737974-4737993 | Msa0189320:CDS | 50.0% | |
| !! | ATCAATGGGGAGTACTGCGG+CGG | + | chr2_1:4734097-4734116 | Msa0189320:exon | 55.0% |
| GCACCTTTACGAAGACCACG+AGG | - | chr2_1:4734279-4734298 | None:intergenic | 55.0% | |
| CGTGACGAACAAAGGGACGT+TGG | - | chr2_1:4734338-4734357 | None:intergenic | 55.0% | |
| ! | GGTCAGGAAGGCACATGAGT+AGG | - | chr2_1:4734950-4734969 | None:intergenic | 55.0% |
| CTGTCTGAGGATGCTGATGC+TGG | + | chr2_1:4735049-4735068 | Msa0189320:CDS | 55.0% | |
| GCTACCGTTGGTCAGAGTGA+TGG | + | chr2_1:4735112-4735131 | Msa0189320:CDS | 55.0% | |
| !! | GGGTCAGCTTTTGGGAACTC+TGG | + | chr2_1:4735382-4735401 | Msa0189320:CDS | 55.0% |
| CCGTGCTCTTTGTTCAGCCT+AGG | - | chr2_1:4736912-4736931 | None:intergenic | 55.0% | |
| ! | AAACGGAGGAGGGACTTGGT+AGG | + | chr2_1:4736980-4736999 | Msa0189320:intron | 55.0% |
| TCAGACTCTTAGGGCACGTG+TGG | + | chr2_1:4737096-4737115 | Msa0189320:intron | 55.0% | |
| !! | TCGTGGCGGGCCATTACTTT+AGG | - | chr2_1:4738195-4738214 | None:intergenic | 55.0% |
| GAGAGGCTTCGAGATCCTCG+TGG | + | chr2_1:4734261-4734280 | Msa0189320:CDS | 60.0% | |
| !! | TGGTGATGGGGAGCTGTCTG+AGG | + | chr2_1:4735036-4735055 | Msa0189320:CDS | 60.0% |
| AGCAGCTGCAGGATCTGCAG+TGG | - | chr2_1:4738158-4738177 | None:intergenic | 60.0% | |
| !! | AATGGGGAGTACTGCGGCGG+CGG | + | chr2_1:4734100-4734119 | Msa0189320:exon | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 4734032 | 4738488 | 4734032 | ID=Msa0189320;Name=Msa0189320 |
| chr2_1 | mRNA | 4734032 | 4738488 | 4734032 | ID=Msa0189320-mRNA-1;Parent=Msa0189320;Name=Msa0189320-mRNA-1;_AED=0.19;_eAED=0.19;_QI=69|1|1|1|1|1|10|287|424 |
| chr2_1 | exon | 4734032 | 4734181 | 4734032 | ID=Msa0189320-mRNA-1:exon:2075;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4734255 | 4734356 | 4734255 | ID=Msa0189320-mRNA-1:exon:2076;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4734439 | 4734507 | 4734439 | ID=Msa0189320-mRNA-1:exon:2077;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4735034 | 4735198 | 4735034 | ID=Msa0189320-mRNA-1:exon:2078;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4735293 | 4735406 | 4735293 | ID=Msa0189320-mRNA-1:exon:2079;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4735562 | 4735633 | 4735562 | ID=Msa0189320-mRNA-1:exon:2080;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4736914 | 4736997 | 4736914 | ID=Msa0189320-mRNA-1:exon:2081;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4737100 | 4737200 | 4737100 | ID=Msa0189320-mRNA-1:exon:2082;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4737522 | 4737606 | 4737522 | ID=Msa0189320-mRNA-1:exon:2083;Parent=Msa0189320-mRNA-1 |
| chr2_1 | exon | 4737800 | 4738488 | 4737800 | ID=Msa0189320-mRNA-1:exon:2084;Parent=Msa0189320-mRNA-1 |
| chr2_1 | five_prime_UTR | 4734032 | 4734100 | 4734032 | ID=Msa0189320-mRNA-1:five_prime_utr;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4734101 | 4734181 | 4734101 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4734255 | 4734356 | 4734255 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4734439 | 4734507 | 4734439 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4735034 | 4735198 | 4735034 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4735293 | 4735406 | 4735293 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4735562 | 4735633 | 4735562 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4736914 | 4736997 | 4736914 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4737100 | 4737200 | 4737100 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4737522 | 4737606 | 4737522 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | CDS | 4737800 | 4738201 | 4737800 | ID=Msa0189320-mRNA-1:cds;Parent=Msa0189320-mRNA-1 |
| chr2_1 | three_prime_UTR | 4738202 | 4738488 | 4738202 | ID=Msa0189320-mRNA-1:three_prime_utr;Parent=Msa0189320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
