Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316870 | XP_003594201.1 | 100.000 | 255 | 0 | 0 | 1 | 255 | 1 | 255 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316870 | sp|Q94IB9|ACER_ARATH | 83.922 | 255 | 41 | 0 | 1 | 255 | 1 | 255 | 5.87e-164 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197490 | Msa0316870 | 0.995018 | 2.937836e-212 | -8.615850e-47 |
| Msa0224110 | Msa0316870 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0239110 | Msa0316870 | 0.930220 | 2.249105e-93 | -8.615850e-47 |
| Msa0281470 | Msa0316870 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
| Msa0316870 | Msa0570180 | 0.813739 | 2.197941e-51 | -8.615850e-47 |
| Msa0316870 | Msa0660150 | 0.800783 | 1.225603e-48 | -8.615850e-47 |
| Msa0316870 | Msa0865420 | 0.804406 | 2.193134e-49 | -8.615850e-47 |
| Msa0316870 | Msa1039440 | -0.805916 | 1.059254e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316870 | MtrunA17_Chr2g0289711 | 100.000 | 255 | 0 | 0 | 1 | 255 | 1 | 255 | 0.0 | 532 |
| Msa0316870 | MtrunA17_Chr4g0075661 | 83.137 | 255 | 43 | 0 | 1 | 255 | 1 | 255 | 5.50e-164 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316870 | AT4G22330.1 | 83.922 | 255 | 41 | 0 | 1 | 255 | 1 | 255 | 5.97e-165 | 456 |
Find 84 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTAAACGACATTAATTT+TGG | 0.084584 | 2_4:+14167549 | None:intergenic |
| CTTCTACTATCTTCCCTTAT+TGG | 0.119063 | 2_4:+14163265 | None:intergenic |
| ATCCACAGGGTCATGCTTTA+TGG | 0.141060 | 2_4:-14163425 | Msa0316870:CDS |
| CCGAAATTCGTTCGTTTATT+CGG | 0.222369 | 2_4:-14163324 | Msa0316870:CDS |
| AGTTATCAATGTTTCGTTCT+TGG | 0.238962 | 2_4:-14163206 | Msa0316870:three_prime_UTR |
| ATGCCATATGGATGCTTTCT+TGG | 0.243312 | 2_4:-14163093 | Msa0316870:three_prime_UTR |
| CCGAATAAACGAACGAATTT+CGG | 0.256613 | 2_4:+14163324 | None:intergenic |
| TATGTTGTGTAGCCCTTTCT+AGG | 0.272782 | 2_4:-14162971 | Msa0316870:three_prime_UTR |
| ATGTAATACTTGTACATTCT+TGG | 0.273154 | 2_4:+14163570 | None:intergenic |
| ACCATTCTCCTGGCTTTCAT+TGG | 0.316082 | 2_4:-14165178 | Msa0316870:CDS |
| TTCTACTAGGAAGTTTGTTT+TGG | 0.323549 | 2_4:-14163494 | Msa0316870:CDS |
| CAGAAACGATATCTAGCTTC+TGG | 0.333834 | 2_4:-14165294 | Msa0316870:CDS |
| GCATCCATATGGCATAAATA+TGG | 0.345257 | 2_4:+14163101 | None:intergenic |
| CACTCAATAGTTGATGTAAC+TGG | 0.360779 | 2_4:+14165268 | None:intergenic |
| AAAGTAATGTTAACAGTCTA+AGG | 0.377967 | 2_4:+14163070 | None:intergenic |
| GCCGTGCTCAACAGCGTGGC+TGG | 0.384130 | 2_4:-14163350 | Msa0316870:CDS |
| TCAAATATGACGCTTGCCTT+TGG | 0.392633 | 2_4:-14165100 | Msa0316870:CDS |
| CAGGAAAGTGTTTGCAAAGT+AGG | 0.394936 | 2_4:+14163380 | None:intergenic |
| ATTTCAAAATGAAAGTTTCC+AGG | 0.400012 | 2_4:-14162890 | Msa0316870:three_prime_UTR |
| GCATGACCCTGTGGATTAAC+CGG | 0.418952 | 2_4:+14163432 | None:intergenic |
| TACTCAAAACTCACCTAGAA+AGG | 0.423500 | 2_4:+14162958 | None:intergenic |
| CAACATTCCGACCATTCTCC+TGG | 0.430879 | 2_4:-14165188 | Msa0316870:CDS |
| TGTACCATATTTATGCCATA+TGG | 0.442440 | 2_4:-14163105 | Msa0316870:three_prime_UTR |
| AACCAATACAGCAAAACCTT+TGG | 0.453134 | 2_4:+14163041 | None:intergenic |
| GTACTACGGTAGTGCCAATC+TGG | 0.453661 | 2_4:+14163705 | None:intergenic |
| TCATTTGTCCGTTTCGACAT+TGG | 0.453662 | 2_4:-14163633 | Msa0316870:CDS |
| CATCAAATTCCCAACTGGCC+TGG | 0.454091 | 2_4:+14162872 | None:intergenic |
| AACTTCAAAATTGCTTTCAC+CGG | 0.457416 | 2_4:-14162916 | Msa0316870:three_prime_UTR |
| CTGATTTAGATTGGTGTAAG+TGG | 0.458286 | 2_4:-14163166 | Msa0316870:three_prime_UTR |
| AGTAGATCGCATCCTGGGTT+GGG | 0.461992 | 2_4:+14167421 | None:intergenic |
| CTGTGGATTAACCGGCCATT+GGG | 0.462085 | 2_4:+14163440 | None:intergenic |
| GGTCAGATTAACAGAACAAA+AGG | 0.476863 | 2_4:+14167487 | None:intergenic |
| GTTGAGCACGGCAAAACATC+AGG | 0.477135 | 2_4:+14163361 | None:intergenic |
| ATCTAGTTAAGCAAATCATC+TGG | 0.486207 | 2_4:-14165333 | Msa0316870:five_prime_UTR |
| TGTCGAAACGGACAAATGAA+TGG | 0.488334 | 2_4:+14163637 | None:intergenic |
| CCAATGGCCGGTTAATCCAC+AGG | 0.505612 | 2_4:-14163439 | Msa0316870:CDS |
| CATAACATCAAATTCCCAAC+TGG | 0.507693 | 2_4:+14162867 | None:intergenic |
| GGAGACAGAGAATGACATAA+TGG | 0.509746 | 2_4:+14163601 | None:intergenic |
| TGAAAGTTTCCAGGCCAGTT+GGG | 0.511129 | 2_4:-14162881 | Msa0316870:three_prime_UTR |
| CCTGTGGATTAACCGGCCAT+TGG | 0.512230 | 2_4:+14163439 | None:intergenic |
| AAGTAGATCGCATCCTGGGT+TGG | 0.520586 | 2_4:+14167420 | None:intergenic |
| ATGAAAGTTTCCAGGCCAGT+TGG | 0.521820 | 2_4:-14162882 | Msa0316870:three_prime_UTR |
| AGGCCAAGAAAGCATCCATA+TGG | 0.522886 | 2_4:+14163090 | None:intergenic |
| CGCAGGAGCGAACCCAACCC+AGG | 0.528920 | 2_4:-14167433 | Msa0316870:five_prime_UTR |
| AGTATGTTATTATTAACTTG+TGG | 0.529421 | 2_4:-14162939 | Msa0316870:three_prime_UTR |
| ACTCAAAACTCACCTAGAAA+GGG | 0.533736 | 2_4:+14162959 | None:intergenic |
| CAGGAGAATGGTCGGAATGT+TGG | 0.537529 | 2_4:+14165189 | None:intergenic |
| CAATACTTACACATGTTGTA+AGG | 0.538998 | 2_4:+14165057 | None:intergenic |
| TTATAAGACCAATGAAAGCC+AGG | 0.540378 | 2_4:+14165170 | None:intergenic |
| AAGATAGTAGAAGATGATGA+AGG | 0.542905 | 2_4:-14163255 | Msa0316870:three_prime_UTR |
| CTTTGAAGCCAATGTCGAAA+CGG | 0.545401 | 2_4:+14163625 | None:intergenic |
| ACCAATGAAAGCCAGGAGAA+TGG | 0.545610 | 2_4:+14165177 | None:intergenic |
| AGAAACGATATCTAGCTTCT+GGG | 0.546726 | 2_4:-14165293 | Msa0316870:CDS |
| ACCAGCCACGCTGTTGAGCA+CGG | 0.551632 | 2_4:+14163349 | None:intergenic |
| AGCAAATCATCTGGCTGTAG+AGG | 0.552533 | 2_4:-14165324 | Msa0316870:five_prime_UTR |
| AACAGAACAAAAGGATGGGT+CGG | 0.561669 | 2_4:+14167496 | None:intergenic |
| CCGCAGATGTGTGCGCCAAG+TGG | 0.568975 | 2_4:-14163542 | Msa0316870:CDS |
| GTATAGCTTTGCTATCCACT+TGG | 0.575023 | 2_4:+14163527 | None:intergenic |
| AGATTAACAGAACAAAAGGA+TGG | 0.575396 | 2_4:+14167491 | None:intergenic |
| GAAACAAGTAGATCGCATCC+TGG | 0.579481 | 2_4:+14167415 | None:intergenic |
| ACATTCTCTACTCTCCAGAT+TGG | 0.579595 | 2_4:-14163719 | Msa0316870:CDS |
| CAAGGAGATATCCCAATGGC+CGG | 0.579972 | 2_4:-14163451 | Msa0316870:CDS |
| ACTTCAAAATTGCTTTCACC+GGG | 0.584000 | 2_4:-14162915 | Msa0316870:three_prime_UTR |
| GCAGAGTGATGAAACACCTA+TGG | 0.586255 | 2_4:-14163766 | Msa0316870:CDS |
| AAACAAGTAGATCGCATCCT+GGG | 0.599633 | 2_4:+14167416 | None:intergenic |
| ACACATGTTGTAAGGTAGCA+TGG | 0.603729 | 2_4:+14165065 | None:intergenic |
| AAGATCACTCACGCCGTACG+AGG | 0.604425 | 2_4:-14167531 | Msa0316870:five_prime_UTR |
| GGAAGATGGGCATTGTACTA+CGG | 0.605779 | 2_4:+14163691 | None:intergenic |
| ATGGTATAGCATGCTTCCAA+AGG | 0.607163 | 2_4:+14165084 | None:intergenic |
| TGTACATTCTTGGAATGCAG+AGG | 0.615036 | 2_4:+14163580 | None:intergenic |
| ATGAAAGCCAGGAGAATGGT+CGG | 0.616633 | 2_4:+14165181 | None:intergenic |
| CAAACTTCCTAGTAGAAGAG+TGG | 0.618523 | 2_4:+14163500 | None:intergenic |
| TACGTAGCCACTCTTCTACT+AGG | 0.620775 | 2_4:-14163507 | Msa0316870:CDS |
| CATCTGGCTGTAGAGGAGAA+TGG | 0.624178 | 2_4:-14165317 | Msa0316870:exon |
| GATTAACAGAACAAAAGGAT+GGG | 0.626782 | 2_4:+14167492 | None:intergenic |
| AGCAGAATCTCCCACACCAT+AGG | 0.634318 | 2_4:+14163750 | None:intergenic |
| CCACTTGGCGCACACATCTG+CGG | 0.634725 | 2_4:+14163542 | None:intergenic |
| CAATGGCCGGTTAATCCACA+GGG | 0.640873 | 2_4:-14163438 | Msa0316870:CDS |
| GAAACGATATCTAGCTTCTG+GGG | 0.664142 | 2_4:-14165292 | Msa0316870:CDS |
| TGCCATAAAGCATGACCCTG+TGG | 0.673570 | 2_4:+14163423 | None:intergenic |
| GTGATGAAACACCTATGGTG+TGG | 0.683307 | 2_4:-14163761 | Msa0316870:CDS |
| TGATGAAACACCTATGGTGT+GGG | 0.688402 | 2_4:-14163760 | Msa0316870:CDS |
| ACGGACAAATGAATGGACAA+CGG | 0.707160 | 2_4:+14163644 | None:intergenic |
| TCTGCAAGGAGATATCCCAA+TGG | 0.725537 | 2_4:-14163455 | Msa0316870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTGAAAAAATTAATATT+CGG | + | chr2_4:14162975-14162994 | None:intergenic | 10.0% |
| !! | CAATAAAATACTATAATATT+GGG | + | chr2_4:14164210-14164229 | None:intergenic | 10.0% |
| !! | ATTATATATAAAATAAAGCA+TGG | + | chr2_4:14164849-14164868 | None:intergenic | 10.0% |
| !!! | TATAAATTTTTATTGATGTA+TGG | + | chr2_4:14165764-14165783 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTGCTTATA+TGG | - | chr2_4:14163164-14163183 | Msa0316870:three_prime_UTR | 15.0% |
| !!! | CTTTTAAAATTTTAATCTGT+GGG | - | chr2_4:14163341-14163360 | Msa0316870:CDS | 15.0% |
| !! | AAACAAAAAACATTGTAATT+TGG | + | chr2_4:14163424-14163443 | None:intergenic | 15.0% |
| !! | ACACATACATAAAAAAATAA+TGG | + | chr2_4:14163493-14163512 | None:intergenic | 15.0% |
| !!! | TTTTTTATGTATGTGTAATA+AGG | - | chr2_4:14163497-14163516 | Msa0316870:CDS | 15.0% |
| !! | CCAATAAAATACTATAATAT+TGG | + | chr2_4:14164211-14164230 | None:intergenic | 15.0% |
| !!! | CCAATATTATAGTATTTTAT+TGG | - | chr2_4:14164208-14164227 | Msa0316870:intron | 15.0% |
| !!! | TTGTTATTTTATAGAAAACA+AGG | - | chr2_4:14164366-14164385 | Msa0316870:intron | 15.0% |
| !!! | TTTTGTAACGAAAATATTAA+GGG | - | chr2_4:14165523-14165542 | Msa0316870:intron | 15.0% |
| !!! | AAGACAAAATTTTCTTTTAT+GGG | + | chr2_4:14165587-14165606 | None:intergenic | 15.0% |
| !! | AAAAAAATCAAGTTTATAAC+AGG | - | chr2_4:14166346-14166365 | Msa0316870:intron | 15.0% |
| !!! | TTTTCTTTAATGATACATTT+TGG | - | chr2_4:14167206-14167225 | Msa0316870:intron | 15.0% |
| !!! | ACATTAATTTTGGGTTAATT+AGG | + | chr2_4:14162882-14162901 | None:intergenic | 20.0% |
| !!! | TCTTAAACGACATTAATTTT+GGG | + | chr2_4:14162891-14162910 | None:intergenic | 20.0% |
| !!! | ATCTTAAACGACATTAATTT+TGG | + | chr2_4:14162892-14162911 | None:intergenic | 20.0% |
| !!! | GCTTTTAAAATTTTAATCTG+TGG | - | chr2_4:14163340-14163359 | Msa0316870:CDS | 20.0% |
| !!! | TTACAATGTTTTTTGTTTTG+TGG | - | chr2_4:14163426-14163445 | Msa0316870:CDS | 20.0% |
| !!! | TCATTTTGAATTTCATAAGT+AGG | - | chr2_4:14163564-14163583 | Msa0316870:CDS | 20.0% |
| !! | AATCAAGTGTAAATCTTTAT+AGG | - | chr2_4:14163668-14163687 | Msa0316870:CDS | 20.0% |
| !! | CTTCAATATTTCCAAAATAT+CGG | - | chr2_4:14164083-14164102 | Msa0316870:intron | 20.0% |
| !! | AAATAACAAGCTAAAAATTG+CGG | + | chr2_4:14164158-14164177 | None:intergenic | 20.0% |
| !!! | TTATTTTATAGAAAACAAGG+AGG | - | chr2_4:14164369-14164388 | Msa0316870:intron | 20.0% |
| !!! | TATTTTATAGAAAACAAGGA+GGG | - | chr2_4:14164370-14164389 | Msa0316870:intron | 20.0% |
| !! | TATTATATTATGGGAAATAC+TGG | + | chr2_4:14164462-14164481 | None:intergenic | 20.0% |
| !!! | GGTTTTTGGTATTATATTAT+GGG | + | chr2_4:14164471-14164490 | None:intergenic | 20.0% |
| !!! | AGGTTTTTGGTATTATATTA+TGG | + | chr2_4:14164472-14164491 | None:intergenic | 20.0% |
| !!! | TTATCACACTATTTAGATTT+TGG | - | chr2_4:14164671-14164690 | Msa0316870:intron | 20.0% |
| !!! | TATCACACTATTTAGATTTT+GGG | - | chr2_4:14164672-14164691 | Msa0316870:intron | 20.0% |
| !!! | TTATAAATGCTTTTAGACAA+CGG | - | chr2_4:14165285-14165304 | Msa0316870:CDS | 20.0% |
| !!! | AATATTTTCGTTACAAAACA+AGG | + | chr2_4:14165521-14165540 | None:intergenic | 20.0% |
| !!! | GTTTTGTAACGAAAATATTA+AGG | - | chr2_4:14165522-14165541 | Msa0316870:intron | 20.0% |
| !!! | CAAGACAAAATTTTCTTTTA+TGG | + | chr2_4:14165588-14165607 | None:intergenic | 20.0% |
| !!! | CATAAAAGAAAATTTTGTCT+TGG | - | chr2_4:14165586-14165605 | Msa0316870:intron | 20.0% |
| !! | AATAAGCCAGAAATATTAAT+TGG | - | chr2_4:14165718-14165737 | Msa0316870:intron | 20.0% |
| !! | ATAAGCCAGAAATATTAATT+GGG | - | chr2_4:14165719-14165738 | Msa0316870:intron | 20.0% |
| !! | ATGGAAATAAAGAAATACAA+GGG | + | chr2_4:14165918-14165937 | None:intergenic | 20.0% |
| !! | TATGGAAATAAAGAAATACA+AGG | + | chr2_4:14165919-14165938 | None:intergenic | 20.0% |
| !! | AAATAAGTTTGTCTAACATA+TGG | + | chr2_4:14165937-14165956 | None:intergenic | 20.0% |
| !!! | TTTATAACAGGTTCTAATTT+AGG | - | chr2_4:14166358-14166377 | Msa0316870:intron | 20.0% |
| !!! | CAATCAATATCTATTGTTTT+TGG | - | chr2_4:14166605-14166624 | Msa0316870:intron | 20.0% |
| !!! | TTTGTTTTTCTGATTTAGAT+TGG | - | chr2_4:14167263-14167282 | Msa0316870:intron | 20.0% |
| !!! | ATATATTTTGTTGCAGTTTT+AGG | - | chr2_4:14167307-14167326 | Msa0316870:intron | 20.0% |
| !!! | AGTATGTTATTATTAACTTG+TGG | - | chr2_4:14167499-14167518 | Msa0316870:five_prime_UTR | 20.0% |
| !!! | GGGTTAATTAGGTTTTTTTT+GGG | + | chr2_4:14162871-14162890 | None:intergenic | 25.0% |
| !!! | TGGGTTAATTAGGTTTTTTT+TGG | + | chr2_4:14162872-14162891 | None:intergenic | 25.0% |
| !! | CTTATATATTTTCACCATCT+GGG | - | chr2_4:14163103-14163122 | Msa0316870:three_prime_UTR | 25.0% |
| !!! | ACCCTTTTGTTTAATTTGAA+CGG | - | chr2_4:14163241-14163260 | Msa0316870:three_prime_UTR | 25.0% |
| ! | TCCGTTCAAATTAAACAAAA+GGG | + | chr2_4:14163245-14163264 | None:intergenic | 25.0% |
| ! | TTCCGTTCAAATTAAACAAA+AGG | + | chr2_4:14163246-14163265 | None:intergenic | 25.0% |
| ! | TATCTTCGTTATGATGAATT+TGG | - | chr2_4:14163377-14163396 | Msa0316870:CDS | 25.0% |
| !!! | TTTGTTTTGTGGTTGTTATT+TGG | - | chr2_4:14163437-14163456 | Msa0316870:CDS | 25.0% |
| ! | GACAATTATTTGAACATTGT+TGG | - | chr2_4:14163541-14163560 | Msa0316870:CDS | 25.0% |
| !! | AGTATTTTATTGGAAACTGA+TGG | - | chr2_4:14164218-14164237 | Msa0316870:intron | 25.0% |
| !! | GTATTTTATTGGAAACTGAT+GGG | - | chr2_4:14164219-14164238 | Msa0316870:intron | 25.0% |
| !!! | TCACTTTTAATTTCTGCTTA+TGG | - | chr2_4:14164702-14164721 | Msa0316870:intron | 25.0% |
| !! | TATTTATTTGAACCGTTTTG+TGG | - | chr2_4:14164869-14164888 | Msa0316870:intron | 25.0% |
| !! | TATGTATCATATCGGATTTT+TGG | - | chr2_4:14164899-14164918 | Msa0316870:intron | 25.0% |
| ! | TTCCTTAAACAATGTTCTTA+GGG | + | chr2_4:14165564-14165583 | None:intergenic | 25.0% |
| !! | AATTTTGTCTTGGAAATACA+AGG | - | chr2_4:14165596-14165615 | Msa0316870:intron | 25.0% |
| ! | ATTGTTTAAGGAATCAAAAG+AGG | + | chr2_4:14165669-14165688 | None:intergenic | 25.0% |
| ! | CAAAACCCAATTAATATTTC+TGG | + | chr2_4:14165727-14165746 | None:intergenic | 25.0% |
| !! | CAGAAATATTAATTGGGTTT+TGG | - | chr2_4:14165725-14165744 | Msa0316870:intron | 25.0% |
| ! | TGGAAATAAAGAAATACAAG+GGG | + | chr2_4:14165917-14165936 | None:intergenic | 25.0% |
| !! | GGTTGATTATTGAACTATTT+TGG | - | chr2_4:14166051-14166070 | Msa0316870:intron | 25.0% |
| !! | AGCTAACTTTTTACAATCAT+TGG | - | chr2_4:14166081-14166100 | Msa0316870:intron | 25.0% |
| !! | GCTAACTTTTTACAATCATT+GGG | - | chr2_4:14166082-14166101 | Msa0316870:intron | 25.0% |
| ! | AATATTGTATGAGAAATGCT+AGG | - | chr2_4:14166123-14166142 | Msa0316870:intron | 25.0% |
| ! | ATATTGTATGAGAAATGCTA+GGG | - | chr2_4:14166124-14166143 | Msa0316870:intron | 25.0% |
| ! | AACTAACTGAATACAATATG+AGG | + | chr2_4:14166304-14166323 | None:intergenic | 25.0% |
| ! | ATATCATTCTCATATCTCAT+TGG | + | chr2_4:14166427-14166446 | None:intergenic | 25.0% |
| ! | ATGTAATACTTGTACATTCT+TGG | + | chr2_4:14166871-14166890 | None:intergenic | 25.0% |
| ! | AAAGTAATGTTAACAGTCTA+AGG | + | chr2_4:14167371-14167390 | None:intergenic | 25.0% |
| !!! | ACTTTCATTTTGAAATTTCC+CGG | + | chr2_4:14167544-14167563 | None:intergenic | 25.0% |
| ! | ATTTCAAAATGAAAGTTTCC+AGG | - | chr2_4:14167548-14167567 | Msa0316870:five_prime_UTR | 25.0% |
| !!! | TAGGTTTTTTTTGGGTACAA+AGG | + | chr2_4:14162863-14162882 | None:intergenic | 30.0% |
| GATTAACAGAACAAAAGGAT+GGG | + | chr2_4:14162949-14162968 | None:intergenic | 30.0% | |
| AGATTAACAGAACAAAAGGA+TGG | + | chr2_4:14162950-14162969 | None:intergenic | 30.0% | |
| GTGAAAAAGATACATACTTG+AGG | + | chr2_4:14163060-14163079 | None:intergenic | 30.0% | |
| CCAGATGGTGAAAATATATA+AGG | + | chr2_4:14163105-14163124 | None:intergenic | 30.0% | |
| ! | CCTTATATATTTTCACCATC+TGG | - | chr2_4:14163102-14163121 | Msa0316870:three_prime_UTR | 30.0% |
| AAAAAAAACGCTTCATGCTT+GGG | + | chr2_4:14163153-14163172 | None:intergenic | 30.0% | |
| AAAAAAAAACGCTTCATGCT+TGG | + | chr2_4:14163154-14163173 | None:intergenic | 30.0% | |
| !! | TCTGCAAATTTTGGTAGAAT+TGG | - | chr2_4:14163287-14163306 | Msa0316870:CDS | 30.0% |
| !! | AATTGGAGTGCATTATTTTG+AGG | - | chr2_4:14163304-14163323 | Msa0316870:CDS | 30.0% |
| !! | TATTTGGTAGTGACTTATTG+TGG | - | chr2_4:14163453-14163472 | Msa0316870:CDS | 30.0% |
| !! | TGGACGTTGTTATTCTTTTA+AGG | - | chr2_4:14163640-14163659 | Msa0316870:CDS | 30.0% |
| !!! | TGAACCCTTGTTTTAAATAG+AGG | - | chr2_4:14163723-14163742 | Msa0316870:CDS | 30.0% |
| !!! | ACAGTTTTAGATAGTGGTAA+GGG | + | chr2_4:14163877-14163896 | None:intergenic | 30.0% |
| !!! | ATGTTGTGTTGTTTTAGCAT+AGG | - | chr2_4:14163940-14163959 | Msa0316870:intron | 30.0% |
| ! | CATCAGTGTTGTTAAATATC+CGG | - | chr2_4:14163987-14164006 | Msa0316870:intron | 30.0% |
| TTGAAGTTGCTAAATCGTAT+CGG | + | chr2_4:14164069-14164088 | None:intergenic | 30.0% | |
| CAAATATGGTATATCAGTCA+TGG | - | chr2_4:14164116-14164135 | Msa0316870:intron | 30.0% | |
| GATTCAATTGAAGAAGTTGA+CGG | - | chr2_4:14164548-14164567 | Msa0316870:intron | 30.0% | |
| AATGAGGACAATGATTATGT+TGG | - | chr2_4:14164590-14164609 | Msa0316870:intron | 30.0% | |
| ATGAGGACAATGATTATGTT+GGG | - | chr2_4:14164591-14164610 | Msa0316870:intron | 30.0% | |
| AGAGTTATTAAATCGTATCG+CGG | + | chr2_4:14164939-14164958 | None:intergenic | 30.0% | |
| TTATAGGGATGGAAACAATA+AGG | + | chr2_4:14165002-14165021 | None:intergenic | 30.0% | |
| ATCTAGTTAAGCAAATCATC+TGG | - | chr2_4:14165105-14165124 | Msa0316870:CDS | 30.0% | |
| CAATACTTACACATGTTGTA+AGG | + | chr2_4:14165384-14165403 | None:intergenic | 30.0% | |
| TTCCCTAAGAACATTGTTTA+AGG | - | chr2_4:14165559-14165578 | Msa0316870:intron | 30.0% | |
| GTTCCTTAAACAATGTTCTT+AGG | + | chr2_4:14165565-14165584 | None:intergenic | 30.0% | |
| AATGTTAACAAGTTCCCTTA+GGG | + | chr2_4:14165693-14165712 | None:intergenic | 30.0% | |
| AAATGTTAACAAGTTCCCTT+AGG | + | chr2_4:14165694-14165713 | None:intergenic | 30.0% | |
| !! | TTAGTTTAGTTGTTTTCCAC+CGG | - | chr2_4:14165790-14165809 | Msa0316870:intron | 30.0% |
| ! | ACATTTGTGCATTTGAGTTA+GGG | - | chr2_4:14165859-14165878 | Msa0316870:intron | 30.0% |
| !!! | AACTTATTTTTGCTACTGAG+AGG | - | chr2_4:14165948-14165967 | Msa0316870:intron | 30.0% |
| !!! | AGGAAGGTTTTATTTCGATT+GGG | - | chr2_4:14165968-14165987 | Msa0316870:intron | 30.0% |
| ! | GATTGTAAAAAGTTAGCTCT+TGG | + | chr2_4:14166079-14166098 | None:intergenic | 30.0% |
| ATATTGGGTGAAATCTATGT+GGG | + | chr2_4:14166251-14166270 | None:intergenic | 30.0% | |
| CTAATACTCACTCTCATATT+GGG | + | chr2_4:14166266-14166285 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCATAT+TGG | + | chr2_4:14166267-14166286 | None:intergenic | 30.0% | |
| ! | GATGTCCTTTTAATATAAGC+AGG | - | chr2_4:14166380-14166399 | Msa0316870:intron | 30.0% |
| AGACACCTGCTTATATTAAA+AGG | + | chr2_4:14166388-14166407 | None:intergenic | 30.0% | |
| ! | GAAGAAAAGTGTAACTGAAA+AGG | + | chr2_4:14166488-14166507 | None:intergenic | 30.0% |
| ! | CATTTGTTGCTCTTGAATTT+AGG | - | chr2_4:14166644-14166663 | Msa0316870:intron | 30.0% |
| CCATAGAAAAATAGGAAGAT+GGG | + | chr2_4:14166763-14166782 | None:intergenic | 30.0% | |
| ACCATAGAAAAATAGGAAGA+TGG | + | chr2_4:14166764-14166783 | None:intergenic | 30.0% | |
| !! | TTCTACTAGGAAGTTTGTTT+TGG | - | chr2_4:14166944-14166963 | Msa0316870:intron | 30.0% |
| AAAAGCCAAAAAGCCAATAA+GGG | - | chr2_4:14167160-14167179 | Msa0316870:intron | 30.0% | |
| AAGATAGTAGAAGATGATGA+AGG | - | chr2_4:14167183-14167202 | Msa0316870:intron | 30.0% | |
| AGTTATCAATGTTTCGTTCT+TGG | - | chr2_4:14167232-14167251 | Msa0316870:intron | 30.0% | |
| TGTACCATATTTATGCCATA+TGG | - | chr2_4:14167333-14167352 | Msa0316870:intron | 30.0% | |
| !! | ACATTACTTTTGACAACCAA+AGG | - | chr2_4:14167381-14167400 | Msa0316870:intron | 30.0% |
| TACAAGTAAAAATGAGCTAC+TGG | + | chr2_4:14167443-14167462 | None:intergenic | 30.0% | |
| AACTTCAAAATTGCTTTCAC+CGG | - | chr2_4:14167522-14167541 | Msa0316870:five_prime_UTR | 30.0% | |
| GGTCAGATTAACAGAACAAA+AGG | + | chr2_4:14162954-14162973 | None:intergenic | 35.0% | |
| TCAAACACAAAAACAAACGC+AGG | - | chr2_4:14162988-14163007 | Msa0316870:three_prime_UTR | 35.0% | |
| ! | TGGATCTTCTCTGCAAATTT+TGG | - | chr2_4:14163278-14163297 | Msa0316870:exon | 35.0% |
| ! | CGGACCTCTATTTAAAACAA+GGG | + | chr2_4:14163730-14163749 | None:intergenic | 35.0% |
| !!! | CACAGTTTTAGATAGTGGTA+AGG | + | chr2_4:14163878-14163897 | None:intergenic | 35.0% |
| !! | TGACAATTCATTCTAGTTCC+AGG | + | chr2_4:14163901-14163920 | None:intergenic | 35.0% |
| AACACTGATGTTAATGCACA+AGG | + | chr2_4:14163977-14163996 | None:intergenic | 35.0% | |
| ! | TTTATTGGAAACTGATGGGT+CGG | - | chr2_4:14164223-14164242 | Msa0316870:intron | 35.0% |
| ! | CACATTTTTCGCTTTCGTTT+GGG | + | chr2_4:14164308-14164327 | None:intergenic | 35.0% |
| ! | ACACATTTTTCGCTTTCGTT+TGG | + | chr2_4:14164309-14164328 | None:intergenic | 35.0% |
| AGAATCAGAAGCAGAGTTTA+AGG | - | chr2_4:14164511-14164530 | Msa0316870:intron | 35.0% | |
| TGAGGACAATGATTATGTTG+GGG | - | chr2_4:14164592-14164611 | Msa0316870:intron | 35.0% | |
| TTCAAACAACTAGTAGAACC+TGG | + | chr2_4:14164757-14164776 | None:intergenic | 35.0% | |
| GCTTACGCTATGTATCATAT+CGG | - | chr2_4:14164891-14164910 | Msa0316870:intron | 35.0% | |
| ! | AGTCCTGCAACTTGTTTATA+GGG | + | chr2_4:14165017-14165036 | None:intergenic | 35.0% |
| ! | TTGCAGGACTGATTGTATTT+TGG | - | chr2_4:14165027-14165046 | Msa0316870:intron | 35.0% |
| ACAAATTCCTGCAAATCATG+TGG | + | chr2_4:14165060-14165079 | None:intergenic | 35.0% | |
| ! | AGAAACGATATCTAGCTTCT+GGG | - | chr2_4:14165145-14165164 | Msa0316870:CDS | 35.0% |
| ! | CACTCAATAGTTGATGTAAC+TGG | + | chr2_4:14165173-14165192 | None:intergenic | 35.0% |
| TTATAAGACCAATGAAAGCC+AGG | + | chr2_4:14165271-14165290 | None:intergenic | 35.0% | |
| ATTCCTTAAACAATGCCCTA+AGG | - | chr2_4:14165675-14165694 | Msa0316870:intron | 35.0% | |
| TTCCTTAAACAATGCCCTAA+GGG | - | chr2_4:14165676-14165695 | Msa0316870:intron | 35.0% | |
| ! | GACATTTGTGCATTTGAGTT+AGG | - | chr2_4:14165858-14165877 | Msa0316870:intron | 35.0% |
| ! | CATTTGTGCATTTGAGTTAG+GGG | - | chr2_4:14165860-14165879 | Msa0316870:intron | 35.0% |
| ! | ATTTGTGCATTTGAGTTAGG+GGG | - | chr2_4:14165861-14165880 | Msa0316870:intron | 35.0% |
| AGAAATACAAGGGGAGAAAA+GGG | + | chr2_4:14165908-14165927 | None:intergenic | 35.0% | |
| AAGAAATACAAGGGGAGAAA+AGG | + | chr2_4:14165909-14165928 | None:intergenic | 35.0% | |
| !! | TATTTTTGCTACTGAGAGGA+AGG | - | chr2_4:14165952-14165971 | Msa0316870:intron | 35.0% |
| !!! | GAGGAAGGTTTTATTTCGAT+TGG | - | chr2_4:14165967-14165986 | Msa0316870:intron | 35.0% |
| TAGCTGTTTGATTATGCTTG+AGG | - | chr2_4:14166029-14166048 | Msa0316870:intron | 35.0% | |
| AGCTGTTTGATTATGCTTGA+GGG | - | chr2_4:14166030-14166049 | Msa0316870:intron | 35.0% | |
| TCTAACACTCACTCTCTTAT+TGG | - | chr2_4:14166169-14166188 | Msa0316870:intron | 35.0% | |
| CTAACACTCACTCTCTTATT+GGG | - | chr2_4:14166170-14166189 | Msa0316870:intron | 35.0% | |
| TAAAATGGTGAAACCCACTT+GGG | + | chr2_4:14166201-14166220 | None:intergenic | 35.0% | |
| ATAAAATGGTGAAACCCACT+TGG | + | chr2_4:14166202-14166221 | None:intergenic | 35.0% | |
| ! | GAAATGGGTTCCACATAAAA+TGG | + | chr2_4:14166216-14166235 | None:intergenic | 35.0% |
| CATATTGGGTGAAATCTATG+TGG | + | chr2_4:14166252-14166271 | None:intergenic | 35.0% | |
| !! | AATACAATATGAGGAGTGCT+AGG | + | chr2_4:14166295-14166314 | None:intergenic | 35.0% |
| CTATCGTAATCATAATGCGT+AGG | - | chr2_4:14166542-14166561 | Msa0316870:intron | 35.0% | |
| !! | CCCATCTTCCTATTTTTCTA+TGG | - | chr2_4:14166760-14166779 | Msa0316870:intron | 35.0% |
| AAGCAGCACCATAGAAAAAT+AGG | + | chr2_4:14166771-14166790 | None:intergenic | 35.0% | |
| ! | TGCTTTATGGCATGTTTTCA+TGG | - | chr2_4:14167026-14167045 | Msa0316870:intron | 35.0% |
| ! | GCTTTATGGCATGTTTTCAT+GGG | - | chr2_4:14167027-14167046 | Msa0316870:intron | 35.0% |
| CCGAATAAACGAACGAATTT+CGG | + | chr2_4:14167117-14167136 | None:intergenic | 35.0% | |
| CCGAAATTCGTTCGTTTATT+CGG | - | chr2_4:14167114-14167133 | Msa0316870:intron | 35.0% | |
| ! | GGCTTTTCAATCTTCACATA+TGG | + | chr2_4:14167147-14167166 | None:intergenic | 35.0% |
| GAAAAGCCAAAAAGCCAATA+AGG | - | chr2_4:14167159-14167178 | Msa0316870:intron | 35.0% | |
| !!! | ATCTTCCCTTATTGGCTTTT+TGG | + | chr2_4:14167168-14167187 | None:intergenic | 35.0% |
| CTTCTACTATCTTCCCTTAT+TGG | + | chr2_4:14167176-14167195 | None:intergenic | 35.0% | |
| CTGATTTAGATTGGTGTAAG+TGG | - | chr2_4:14167272-14167291 | Msa0316870:intron | 35.0% | |
| GCATCCATATGGCATAAATA+TGG | + | chr2_4:14167340-14167359 | None:intergenic | 35.0% | |
| !! | AACCAAAGGTTTTGCTGTAT+TGG | - | chr2_4:14167395-14167414 | Msa0316870:intron | 35.0% |
| AACCAATACAGCAAAACCTT+TGG | + | chr2_4:14167400-14167419 | None:intergenic | 35.0% | |
| ACTCAAAACTCACCTAGAAA+GGG | + | chr2_4:14167482-14167501 | None:intergenic | 35.0% | |
| TACTCAAAACTCACCTAGAA+AGG | + | chr2_4:14167483-14167502 | None:intergenic | 35.0% | |
| ACTTCAAAATTGCTTTCACC+GGG | - | chr2_4:14167523-14167542 | Msa0316870:five_prime_UTR | 35.0% | |
| CATAACATCAAATTCCCAAC+TGG | + | chr2_4:14167574-14167593 | None:intergenic | 35.0% | |
| ! | GATGATCTCTTTTCCTCGTA+CGG | + | chr2_4:14162923-14162942 | None:intergenic | 40.0% |
| AACAGAACAAAAGGATGGGT+CGG | + | chr2_4:14162945-14162964 | None:intergenic | 40.0% | |
| AAACAAGTAGATCGCATCCT+GGG | + | chr2_4:14163025-14163044 | None:intergenic | 40.0% | |
| CATAAAAACAACGACCCAGA+TGG | + | chr2_4:14163120-14163139 | None:intergenic | 40.0% | |
| GAACGGAAAACGATTCAGAT+TGG | - | chr2_4:14163258-14163277 | Msa0316870:three_prime_UTR | 40.0% | |
| GTTTGTGTCTTGCGTTTGTA+TGG | - | chr2_4:14163620-14163639 | Msa0316870:CDS | 40.0% | |
| ! | GCGGACCTCTATTTAAAACA+AGG | + | chr2_4:14163731-14163750 | None:intergenic | 40.0% |
| CATTGCAGTTCTTGACATTG+CGG | + | chr2_4:14163845-14163864 | None:intergenic | 40.0% | |
| !! | GCAGTATAGCACTGATATAC+CGG | + | chr2_4:14164009-14164028 | None:intergenic | 40.0% |
| CTCTTCCGTATCGAAAGTTA+GGG | - | chr2_4:14164028-14164047 | Msa0316870:intron | 40.0% | |
| GTCTACCCTAACTTTCGATA+CGG | + | chr2_4:14164036-14164055 | None:intergenic | 40.0% | |
| ! | GTGCAATCTCTCCGATATTT+TGG | + | chr2_4:14164097-14164116 | None:intergenic | 40.0% |
| TCGGAGAGATTGCACAAATA+TGG | - | chr2_4:14164102-14164121 | Msa0316870:intron | 40.0% | |
| ATCAGTCATGGCATGCATAT+CGG | - | chr2_4:14164128-14164147 | Msa0316870:intron | 40.0% | |
| CGAAAGCGAAAAATGTGTAG+TGG | - | chr2_4:14164311-14164330 | Msa0316870:intron | 40.0% | |
| TAGAAAACAAGGAGGGATAG+TGG | - | chr2_4:14164377-14164396 | Msa0316870:intron | 40.0% | |
| TGCCTCACTATCTGAAAATG+AGG | - | chr2_4:14164574-14164593 | Msa0316870:intron | 40.0% | |
| ! | GTCCTCATTTTCAGATAGTG+AGG | + | chr2_4:14164579-14164598 | None:intergenic | 40.0% |
| CAATGATTATGTTGGGGAAG+AGG | - | chr2_4:14164598-14164617 | Msa0316870:intron | 40.0% | |
| ACATAGCGTAAGCCACAAAA+CGG | + | chr2_4:14164884-14164903 | None:intergenic | 40.0% | |
| ! | CTGCAACTTGTTTATAGGGA+TGG | + | chr2_4:14165013-14165032 | None:intergenic | 40.0% |
| CATCCCTATAAACAAGTTGC+AGG | - | chr2_4:14165011-14165030 | Msa0316870:intron | 40.0% | |
| ! | CAGTCCTGCAACTTGTTTAT+AGG | + | chr2_4:14165018-14165037 | None:intergenic | 40.0% |
| ! | CAGAAACGATATCTAGCTTC+TGG | - | chr2_4:14165144-14165163 | Msa0316870:CDS | 40.0% |
| ! | GAAACGATATCTAGCTTCTG+GGG | - | chr2_4:14165146-14165165 | Msa0316870:CDS | 40.0% |
| TCAAATATGACGCTTGCCTT+TGG | - | chr2_4:14165338-14165357 | Msa0316870:five_prime_UTR | 40.0% | |
| ATGGTATAGCATGCTTCCAA+AGG | + | chr2_4:14165357-14165376 | None:intergenic | 40.0% | |
| ACACATGTTGTAAGGTAGCA+TGG | + | chr2_4:14165376-14165395 | None:intergenic | 40.0% | |
| !! | TTCCCTTAGGGCATTGTTTA+AGG | + | chr2_4:14165681-14165700 | None:intergenic | 40.0% |
| TTATTGGGTGAAACCCAAGT+GGG | - | chr2_4:14166185-14166204 | Msa0316870:intron | 40.0% | |
| ! | GTGGGTTTCACCATTTTATG+TGG | - | chr2_4:14166203-14166222 | Msa0316870:intron | 40.0% |
| TTTCTTCTGCTGAAGCTCTT+AGG | - | chr2_4:14166501-14166520 | Msa0316870:intron | 40.0% | |
| TGATGAAACACCTATGGTGT+GGG | - | chr2_4:14166678-14166697 | Msa0316870:intron | 40.0% | |
| ACATTCTCTACTCTCCAGAT+TGG | - | chr2_4:14166719-14166738 | Msa0316870:intron | 40.0% | |
| ACGGACAAATGAATGGACAA+CGG | + | chr2_4:14166797-14166816 | None:intergenic | 40.0% | |
| TGTCGAAACGGACAAATGAA+TGG | + | chr2_4:14166804-14166823 | None:intergenic | 40.0% | |
| TCATTTGTCCGTTTCGACAT+TGG | - | chr2_4:14166805-14166824 | Msa0316870:intron | 40.0% | |
| !! | CTTTGAAGCCAATGTCGAAA+CGG | + | chr2_4:14166816-14166835 | None:intergenic | 40.0% |
| GGAGACAGAGAATGACATAA+TGG | + | chr2_4:14166840-14166859 | None:intergenic | 40.0% | |
| TGTACATTCTTGGAATGCAG+AGG | + | chr2_4:14166861-14166880 | None:intergenic | 40.0% | |
| ! | GTATAGCTTTGCTATCCACT+TGG | + | chr2_4:14166914-14166933 | None:intergenic | 40.0% |
| CAAACTTCCTAGTAGAAGAG+TGG | + | chr2_4:14166941-14166960 | None:intergenic | 40.0% | |
| ! | ATGTGATCGAGTTTTCTGCA+AGG | - | chr2_4:14166969-14166988 | Msa0316870:intron | 40.0% |
| !! | CAGGAAAGTGTTTGCAAAGT+AGG | + | chr2_4:14167061-14167080 | None:intergenic | 40.0% |
| ATGCCATATGGATGCTTTCT+TGG | - | chr2_4:14167345-14167364 | Msa0316870:intron | 40.0% | |
| TATGTTGTGTAGCCCTTTCT+AGG | - | chr2_4:14167467-14167486 | Msa0316870:five_prime_UTR | 40.0% | |
| GAAACAAGTAGATCGCATCC+TGG | + | chr2_4:14163026-14163045 | None:intergenic | 45.0% | |
| ! | CGATCTAGGATGTGACATGT+CGG | - | chr2_4:14163756-14163775 | Msa0316870:CDS | 45.0% |
| AGAGGACGCAATCACAATCA+TGG | + | chr2_4:14163804-14163823 | None:intergenic | 45.0% | |
| AAAACCACAGTCAGATGCAG+AGG | + | chr2_4:14163822-14163841 | None:intergenic | 45.0% | |
| ! | GATAGTGGTAAGGGTTGTTG+TGG | + | chr2_4:14163868-14163887 | None:intergenic | 45.0% |
| !!! | CCAGGCACAGTTTTAGATAG+TGG | + | chr2_4:14163883-14163902 | None:intergenic | 45.0% |
| ! | CCACTATCTAAAACTGTGCC+TGG | - | chr2_4:14163880-14163899 | Msa0316870:intron | 45.0% |
| GCTCTTCCGTATCGAAAGTT+AGG | - | chr2_4:14164027-14164046 | Msa0316870:intron | 45.0% | |
| ! | AACTGATGGGTCGGTCAAAT+AGG | - | chr2_4:14164232-14164251 | Msa0316870:intron | 45.0% |
| ! | GCAGGGTCATCATAGGTTTT+TGG | + | chr2_4:14164485-14164504 | None:intergenic | 45.0% |
| CTTCTGATTCTACCAAGGCA+GGG | + | chr2_4:14164502-14164521 | None:intergenic | 45.0% | |
| CTCTGCTTCTGATTCTACCA+AGG | + | chr2_4:14164507-14164526 | None:intergenic | 45.0% | |
| AGGGATGGAAACAATAAGGC+AGG | + | chr2_4:14164998-14165017 | None:intergenic | 45.0% | |
| AGCAAATCATCTGGCTGTAG+AGG | - | chr2_4:14165114-14165133 | Msa0316870:CDS | 45.0% | |
| ATGAAAGCCAGGAGAATGGT+CGG | + | chr2_4:14165260-14165279 | None:intergenic | 45.0% | |
| ! | ACCATTCTCCTGGCTTTCAT+TGG | - | chr2_4:14165260-14165279 | Msa0316870:CDS | 45.0% |
| ACCAATGAAAGCCAGGAGAA+TGG | + | chr2_4:14165264-14165283 | None:intergenic | 45.0% | |
| CATTAGTGAGACAGCTATGC+CGG | + | chr2_4:14165812-14165831 | None:intergenic | 45.0% | |
| CTTATTGGGTGAAACCCAAG+TGG | - | chr2_4:14166184-14166203 | Msa0316870:intron | 45.0% | |
| TGGAACCCATTTCCAAAGAG+TGG | - | chr2_4:14166223-14166242 | Msa0316870:intron | 45.0% | |
| ! | GGGTACCACTCTTTGGAAAT+GGG | + | chr2_4:14166231-14166250 | None:intergenic | 45.0% |
| ! | TGGGTACCACTCTTTGGAAA+TGG | + | chr2_4:14166232-14166251 | None:intergenic | 45.0% |
| TCTATGTGGGTACCACTCTT+TGG | + | chr2_4:14166238-14166257 | None:intergenic | 45.0% | |
| GCTGAAGCTCTTAGGCAATT+AGG | - | chr2_4:14166509-14166528 | Msa0316870:intron | 45.0% | |
| GCAGAGTGATGAAACACCTA+TGG | - | chr2_4:14166672-14166691 | Msa0316870:intron | 45.0% | |
| GTGATGAAACACCTATGGTG+TGG | - | chr2_4:14166677-14166696 | Msa0316870:intron | 45.0% | |
| ! | GGAAGATGGGCATTGTACTA+CGG | + | chr2_4:14166750-14166769 | None:intergenic | 45.0% |
| TACGTAGCCACTCTTCTACT+AGG | - | chr2_4:14166931-14166950 | Msa0316870:intron | 45.0% | |
| TCTGCAAGGAGATATCCCAA+TGG | - | chr2_4:14166983-14167002 | Msa0316870:intron | 45.0% | |
| ATCCACAGGGTCATGCTTTA+TGG | - | chr2_4:14167013-14167032 | Msa0316870:intron | 45.0% | |
| !! | AGGCCAAGAAAGCATCCATA+TGG | + | chr2_4:14167351-14167370 | None:intergenic | 45.0% |
| ATGAAAGTTTCCAGGCCAGT+TGG | - | chr2_4:14167556-14167575 | Msa0316870:five_prime_UTR | 45.0% | |
| TGAAAGTTTCCAGGCCAGTT+GGG | - | chr2_4:14167557-14167576 | Msa0316870:five_prime_UTR | 45.0% | |
| !! | TTCTATTATATTATTATATT+GGG | + | chr2_4:14164262-14164281 | None:intergenic | 5.0% |
| !! | ATTCTATTATATTATTATAT+TGG | + | chr2_4:14164263-14164282 | None:intergenic | 5.0% |
| AGTAGATCGCATCCTGGGTT+GGG | + | chr2_4:14163020-14163039 | None:intergenic | 50.0% | |
| AAGTAGATCGCATCCTGGGT+TGG | + | chr2_4:14163021-14163040 | None:intergenic | 50.0% | |
| CACATCCTAGATCGCAGTTG+CGG | + | chr2_4:14163750-14163769 | None:intergenic | 50.0% | |
| GATGGGTCGGTCAAATAGGT+AGG | - | chr2_4:14164236-14164255 | Msa0316870:intron | 50.0% | |
| AACCTATGATGACCCTGCCT+TGG | - | chr2_4:14164487-14164506 | Msa0316870:intron | 50.0% | |
| TACCAAGGCAGGGTCATCAT+AGG | + | chr2_4:14164492-14164511 | None:intergenic | 50.0% | |
| GCTTCTGATTCTACCAAGGC+AGG | + | chr2_4:14164503-14164522 | None:intergenic | 50.0% | |
| AACGTGTGCAACTATGCACC+AGG | - | chr2_4:14164736-14164755 | Msa0316870:intron | 50.0% | |
| ! | CACGTTGCCACATGATTTGC+AGG | - | chr2_4:14165050-14165069 | Msa0316870:intron | 50.0% |
| CATCTGGCTGTAGAGGAGAA+TGG | - | chr2_4:14165121-14165140 | Msa0316870:CDS | 50.0% | |
| CAGGAGAATGGTCGGAATGT+TGG | + | chr2_4:14165252-14165271 | None:intergenic | 50.0% | |
| CAACATTCCGACCATTCTCC+TGG | - | chr2_4:14165250-14165269 | Msa0316870:CDS | 50.0% | |
| AGCAGAATCTCCCACACCAT+AGG | + | chr2_4:14166691-14166710 | None:intergenic | 50.0% | |
| GTACTACGGTAGTGCCAATC+TGG | + | chr2_4:14166736-14166755 | None:intergenic | 50.0% | |
| CAAGGAGATATCCCAATGGC+CGG | - | chr2_4:14166987-14167006 | Msa0316870:intron | 50.0% | |
| ! | CTGTGGATTAACCGGCCATT+GGG | + | chr2_4:14167001-14167020 | None:intergenic | 50.0% |
| CAATGGCCGGTTAATCCACA+GGG | - | chr2_4:14167000-14167019 | Msa0316870:intron | 50.0% | |
| ! | GCATGACCCTGTGGATTAAC+CGG | + | chr2_4:14167009-14167028 | None:intergenic | 50.0% |
| TGCCATAAAGCATGACCCTG+TGG | + | chr2_4:14167018-14167037 | None:intergenic | 50.0% | |
| GTTGAGCACGGCAAAACATC+AGG | + | chr2_4:14167080-14167099 | None:intergenic | 50.0% | |
| CATCAAATTCCCAACTGGCC+TGG | + | chr2_4:14167569-14167588 | None:intergenic | 50.0% | |
| AAGATCACTCACGCCGTACG+AGG | - | chr2_4:14162907-14162926 | Msa0316870:three_prime_UTR | 55.0% | |
| !! | GGAGGGATAGTGGATGTAGC+TGG | - | chr2_4:14164387-14164406 | Msa0316870:intron | 55.0% |
| TAGTGAGACAGCTATGCCGG+TGG | + | chr2_4:14165809-14165828 | None:intergenic | 55.0% | |
| ! | CCTGTGGATTAACCGGCCAT+TGG | + | chr2_4:14167002-14167021 | None:intergenic | 55.0% |
| CCAATGGCCGGTTAATCCAC+AGG | - | chr2_4:14166999-14167018 | Msa0316870:intron | 55.0% | |
| ! | TTTTGCCGTGCTCAACAGCG+TGG | - | chr2_4:14167084-14167103 | Msa0316870:intron | 55.0% |
| GAGGTCCGCAACTGCGATCT+AGG | - | chr2_4:14163742-14163761 | Msa0316870:CDS | 60.0% | |
| GCGTCCTCTGCATCTGACTG+TGG | - | chr2_4:14163815-14163834 | Msa0316870:intron | 60.0% | |
| CCACTTGGCGCACACATCTG+CGG | + | chr2_4:14166899-14166918 | None:intergenic | 60.0% | |
| ACCAGCCACGCTGTTGAGCA+CGG | + | chr2_4:14167092-14167111 | None:intergenic | 60.0% | |
| CCGCAGATGTGTGCGCCAAG+TGG | - | chr2_4:14166896-14166915 | Msa0316870:intron | 65.0% | |
| CGCAGGAGCGAACCCAACCC+AGG | - | chr2_4:14163005-14163024 | Msa0316870:three_prime_UTR | 70.0% | |
| GCCGTGCTCAACAGCGTGGC+TGG | - | chr2_4:14167088-14167107 | Msa0316870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 14162845 | 14167615 | 14162845 | ID=Msa0316870;Name=Msa0316870 |
| chr2_4 | mRNA | 14162845 | 14167615 | 14162845 | ID=Msa0316870-mRNA-1;Parent=Msa0316870;Name=Msa0316870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=286|1|1|1|0.5|0.33|3|436|255 |
| chr2_4 | exon | 14162845 | 14163794 | 14162845 | ID=Msa0316870-mRNA-1:exon:5389;Parent=Msa0316870-mRNA-1 |
| chr2_4 | exon | 14165067 | 14165388 | 14165067 | ID=Msa0316870-mRNA-1:exon:5388;Parent=Msa0316870-mRNA-1 |
| chr2_4 | exon | 14167398 | 14167615 | 14167398 | ID=Msa0316870-mRNA-1:exon:5387;Parent=Msa0316870-mRNA-1 |
| chr2_4 | five_prime_UTR | 14167398 | 14167615 | 14167398 | ID=Msa0316870-mRNA-1:five_prime_utr;Parent=Msa0316870-mRNA-1 |
| chr2_4 | five_prime_UTR | 14165321 | 14165388 | 14165321 | ID=Msa0316870-mRNA-1:five_prime_utr;Parent=Msa0316870-mRNA-1 |
| chr2_4 | CDS | 14165067 | 14165320 | 14165067 | ID=Msa0316870-mRNA-1:cds;Parent=Msa0316870-mRNA-1 |
| chr2_4 | CDS | 14163281 | 14163794 | 14163281 | ID=Msa0316870-mRNA-1:cds;Parent=Msa0316870-mRNA-1 |
| chr2_4 | three_prime_UTR | 14162845 | 14163280 | 14162845 | ID=Msa0316870-mRNA-1:three_prime_utr;Parent=Msa0316870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
