AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0660150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0660150 MtrunA17_Chr8g0385571 97.099 517 3 1 1 517 1 505 0.0 1031
Msa0660150 MtrunA17_Chr3g0131501 78.054 483 94 1 35 517 13 483 0.0 795
Msa0660150 MtrunA17_Chr7g0252401 71.575 489 120 3 31 517 11 482 0.0 738
Msa0660150 MtrunA17_Chr5g0396801 38.436 307 162 8 237 517 36 341 1.43e-59 200
Msa0660150 MtrunA17_Chr8g0347451 36.013 311 166 8 237 517 49 356 1.04e-58 198
Msa0660150 MtrunA17_Chr3g0137941 37.410 278 170 2 237 514 120 393 1.12e-53 186
Msa0660150 MtrunA17_Chr1g0149111 38.129 278 168 2 237 514 137 410 1.37e-53 186
Msa0660150 MtrunA17_Chr4g0063561 38.351 279 166 4 237 514 121 394 4.90e-53 184
Msa0660150 MtrunA17_Chr4g0063561 27.304 293 180 9 232 512 24 295 1.16e-20 94.0
Msa0660150 MtrunA17_Chr3g0135861 32.237 304 173 7 239 516 35 331 3.90e-47 167
Msa0660150 MtrunA17_Chr6g0488081 32.258 310 187 6 223 514 2 306 4.67e-45 160
Msa0660150 MtrunA17_Chr6g0488081 33.166 199 120 4 330 517 16 212 2.24e-25 106
Msa0660150 MtrunA17_Chr7g0240341 32.119 302 169 7 239 515 25 315 3.42e-44 158
Msa0660150 MtrunA17_Chr7g0240341 30.693 202 125 4 323 512 15 213 3.61e-23 100
Msa0660150 MtrunA17_Chr7g0240341 27.753 227 150 5 199 418 98 317 1.70e-19 89.4
Msa0660150 MtrunA17_Chr2g0296061 30.820 305 171 7 241 508 17 318 6.42e-39 144
Msa0660150 MtrunA17_Chr2g0296061 31.088 193 116 3 335 512 17 207 1.07e-21 96.3
Msa0660150 MtrunA17_Chr2g0296061 26.341 205 127 6 232 413 119 322 1.77e-13 71.6
Msa0660150 MtrunA17_Chr5g0436041 32.423 293 176 7 239 514 34 321 1.28e-36 138
Msa0660150 MtrunA17_Chr5g0436041 33.696 184 112 5 238 414 140 320 1.11e-15 78.2
Msa0660150 MtrunA17_Chr5g0436041 33.000 200 115 6 326 512 27 220 1.41e-15 77.8
Msa0660150 MtrunA17_Chr4g0067231 29.936 314 178 7 241 515 16 326 3.03e-36 137
Msa0660150 MtrunA17_Chr4g0067231 25.728 206 129 6 231 413 119 323 1.12e-13 72.4
Msa0660150 MtrunA17_Chr7g0269701 32.646 291 171 8 241 514 24 306 2.34e-35 134
Msa0660150 MtrunA17_Chr4g0006851 31.818 286 165 7 239 512 89 356 2.60e-35 135
Msa0660150 MtrunA17_Chr4g0006851 30.814 172 104 5 349 514 105 267 2.56e-16 80.9
Msa0660150 MtrunA17_Chr7g0242311 29.412 272 168 7 250 512 98 354 2.05e-33 130
Msa0660150 MtrunA17_Chr7g0242311 32.749 171 102 3 349 514 103 265 5.96e-20 91.7
Msa0660150 MtrunA17_Chr7g0242311 25.862 174 122 2 241 414 189 355 7.84e-17 82.4
Msa0660150 MtrunA17_Chr3g0115801 33.775 302 172 7 236 517 113 406 5.00e-33 130
Msa0660150 MtrunA17_Chr3g0115801 25.269 186 131 3 328 513 111 288 5.89e-12 67.4
Msa0660150 MtrunA17_Chr1g0195101 31.317 281 168 7 251 514 31 303 1.43e-32 126
Msa0660150 MtrunA17_Chr8g0372531 34.875 281 161 7 255 516 30 307 5.68e-32 125
Msa0660150 MtrunA17_Chr4g0000261 29.276 304 169 10 237 511 64 350 1.83e-31 124
Msa0660150 MtrunA17_Chr4g0000261 28.235 170 114 3 249 414 187 352 7.93e-12 67.0
Msa0660150 MtrunA17_Chr8g0382201 32.039 309 180 10 230 517 186 485 1.93e-31 127
Msa0660150 MtrunA17_Chr3g0135801 26.885 305 199 6 230 516 25 323 1.21e-30 121
Msa0660150 MtrunA17_Chr6g0488341 30.081 246 148 6 275 514 4 231 4.97e-29 115
Msa0660150 MtrunA17_Chr4g0004571 27.798 277 191 5 237 508 14 286 3.23e-27 111
Msa0660150 MtrunA17_Chr4g0004571 28.497 193 122 7 329 514 11 194 7.73e-12 66.2
Msa0660150 MtrunA17_Chr5g0423111 32.740 281 164 9 251 514 33 305 2.07e-26 110
Msa0660150 MtrunA17_Chr5g0423111 28.947 190 114 6 251 425 131 314 2.72e-12 68.2
Msa0660150 MtrunA17_Chr8g0393031 27.143 280 184 6 239 502 18 293 4.26e-25 105
Msa0660150 MtrunA17_Chr1g0200171 22.511 462 319 12 57 515 360 785 1.29e-24 108
Msa0660150 MtrunA17_Chr3g0086811 27.864 323 196 8 226 515 14 332 1.53e-24 105
Msa0660150 MtrunA17_Chr6g0463041 29.091 220 114 4 333 514 25 240 1.96e-23 99.4
Msa0660150 MtrunA17_Chr8g0386871 26.644 289 202 4 230 517 311 590 3.29e-22 100
Msa0660150 MtrunA17_Chr5g0431531 29.000 300 187 11 226 511 24 311 1.41e-21 95.9
Msa0660150 MtrunA17_Chr5g0431531 28.962 183 122 2 333 515 39 213 5.41e-20 91.3
Msa0660150 MtrunA17_Chr6g0463351 28.464 267 170 7 255 511 83 338 5.00e-21 94.7
Msa0660150 MtrunA17_Chr2g0331771 27.915 283 198 3 237 515 154 434 1.59e-20 94.0
Msa0660150 MtrunA17_Chr1g0201361 28.417 278 171 7 240 514 52 304 1.62e-20 92.4
Msa0660150 MtrunA17_Chr3g0088301 28.028 289 170 9 239 502 93 368 2.73e-20 92.8
Msa0660150 MtrunA17_Chr8g0383321 29.032 279 168 7 240 514 53 305 1.10e-19 90.1
Msa0660150 MtrunA17_Chr1g0205941 29.431 299 172 13 241 513 13 298 1.87e-18 86.3
Msa0660150 MtrunA17_Chr8g0352031 26.667 285 180 7 239 502 68 344 1.90e-18 87.0
Msa0660150 MtrunA17_Chr4g0008061 28.231 294 178 10 239 512 15 295 7.92e-18 84.3
Msa0660150 MtrunA17_Chr1g0196921 30.168 179 113 5 322 493 4 177 1.58e-17 83.6
Msa0660150 MtrunA17_Chr1g0196921 24.468 282 195 6 244 512 19 295 1.89e-16 80.1
Msa0660150 MtrunA17_Chr5g0436571 26.296 270 155 10 278 510 53 315 2.08e-17 83.6
Msa0660150 MtrunA17_Chr8g0366791 26.578 301 180 7 241 514 11 297 2.74e-17 82.4
Msa0660150 MtrunA17_Chr8g0366791 28.426 197 121 7 333 514 9 200 1.36e-13 71.6
Msa0660150 MtrunA17_Chr4g0040341 27.465 284 178 9 239 502 75 350 3.77e-17 83.2
Msa0660150 MtrunA17_Chr5g0411411 26.910 301 189 8 236 514 6 297 4.26e-16 79.0
Msa0660150 MtrunA17_Chr2g0328891 27.500 280 183 7 239 502 66 341 5.99e-16 79.3
Msa0660150 MtrunA17_Chr7g0275411 25.098 255 171 7 278 515 85 336 1.87e-15 77.8
Msa0660150 MtrunA17_Chr2g0293621 26.174 298 195 11 235 512 25 317 3.29e-15 77.0
Msa0660150 MtrunA17_Chr2g0293621 27.411 197 126 3 236 415 123 319 3.18e-13 70.9
Msa0660150 MtrunA17_Chr7g0241521 26.846 298 177 9 239 512 17 297 3.64e-15 76.3
Msa0660150 MtrunA17_Chr1g0163521 25.168 298 166 10 272 516 64 357 1.34e-14 75.5
Msa0660150 MtrunA17_Chr4g0028531 23.841 302 212 8 221 510 4 299 2.93e-14 73.9
Msa0660150 MtrunA17_Chr6g0455381 23.377 308 208 8 226 512 4 304 3.95e-14 73.6
Msa0660150 MtrunA17_Chr6g0455381 26.857 175 121 4 345 514 29 201 5.18e-13 70.1
Msa0660150 MtrunA17_Chr6g0488171 33.663 101 65 1 416 514 2 102 8.16e-14 67.8
Msa0660150 MtrunA17_Chr7g0219891 22.549 306 195 9 235 512 17 308 2.36e-13 71.2
Msa0660150 MtrunA17_Chr7g0219891 28.571 210 127 7 226 417 108 312 1.02e-12 69.3
Msa0660150 MtrunA17_Chr4g0051841 23.404 282 197 9 239 511 29 300 2.68e-13 70.9
Msa0660150 MtrunA17_Chr6g0461981 28.436 211 142 5 240 444 64 271 4.45e-13 70.9
Msa0660150 MtrunA17_Chr6g0461981 25.281 178 122 4 336 510 66 235 6.93e-11 63.9
Msa0660150 MtrunA17_Chr5g0407451 26.286 175 119 4 336 509 23 188 1.04e-12 68.9
Msa0660150 MtrunA17_Chr4g0046981 28.571 189 122 4 335 514 14 198 1.20e-12 68.9
Msa0660150 MtrunA17_Chr1g0196161 28.889 180 123 4 339 517 3 178 1.69e-12 66.2
Msa0660150 MtrunA17_Chr7g0251981 30.734 218 136 7 241 447 83 296 2.71e-12 68.6
Msa0660150 MtrunA17_Chr3g0103681 24.839 310 185 9 231 512 7 296 5.92e-12 66.6
Msa0660150 MtrunA17_Chr8g0385891 27.602 221 139 6 241 447 74 287 8.11e-12 66.6
Msa0660150 MtrunA17_Chr8g0385891 28.042 189 113 7 329 510 73 245 2.07e-11 65.5
Msa0660150 MtrunA17_Chr1g0157131 28.205 156 90 4 56 206 380 518 9.66e-12 67.4
Msa0660150 MtrunA17_Chr3g0126331 23.846 260 175 7 276 515 132 388 1.44e-11 66.2
Msa0660150 MtrunA17_Chr5g0416661 27.241 290 182 10 241 510 13 293 1.68e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0660150 AT5G51050.1 72.603 511 121 4 9 517 5 498 0.0 760
Msa0660150 AT5G07320.1 73.306 487 110 3 31 517 13 479 0.0 739
Msa0660150 AT5G61810.1 67.076 489 139 5 30 517 11 478 0.0 682
Msa0660150 AT5G61810.2 70.640 344 91 4 175 517 1 335 8.17e-178 503
Msa0660150 AT4G01100.1 38.462 312 157 8 237 517 40 347 1.14e-62 209
Msa0660150 AT4G01100.2 35.411 353 169 11 216 517 17 361 7.61e-60 202
Msa0660150 AT4G01100.3 38.333 300 150 8 249 517 2 297 5.61e-59 197
Msa0660150 AT4G01100.3 25.714 175 125 1 342 511 1 175 1.85e-18 86.7
Msa0660150 AT4G01100.3 28.846 208 120 6 241 422 97 302 3.55e-14 73.9
Msa0660150 AT4G32400.1 36.918 279 170 3 237 514 112 385 2.10e-52 183
Msa0660150 AT4G32400.1 30.366 191 130 3 226 414 195 384 9.33e-18 85.9
Msa0660150 AT3G53940.1 35.274 292 171 6 239 515 73 361 7.55e-46 164
Msa0660150 AT3G53940.1 32.367 207 126 6 314 511 57 258 2.62e-21 95.9
Msa0660150 AT3G53940.1 29.060 234 133 6 188 414 152 359 6.78e-21 94.7
Msa0660150 AT4G26180.1 31.229 301 180 6 236 516 18 311 1.20e-44 160
Msa0660150 AT3G55640.1 34.114 299 173 9 231 511 30 322 2.31e-43 157
Msa0660150 AT3G55640.1 30.288 208 122 7 320 512 25 224 1.39e-19 90.5
Msa0660150 AT3G55640.4 34.114 299 173 9 231 511 30 322 2.31e-43 157
Msa0660150 AT3G55640.4 30.288 208 122 7 320 512 25 224 1.39e-19 90.5
Msa0660150 AT1G14560.1 31.930 285 166 8 250 511 38 317 7.85e-41 150
Msa0660150 AT1G14560.1 29.412 187 111 4 344 514 38 219 1.42e-19 90.5
Msa0660150 AT2G37890.1 31.757 296 174 6 239 514 45 332 2.91e-40 149
Msa0660150 AT2G37890.1 34.518 197 118 4 324 511 36 230 1.20e-24 105
Msa0660150 AT2G37890.1 35.326 184 109 5 238 414 151 331 6.10e-24 103
Msa0660150 AT4G26180.2 30.634 284 164 6 236 496 18 291 5.64e-39 144
Msa0660150 AT4G26180.2 32.663 199 115 4 330 514 18 211 3.56e-25 105
Msa0660150 AT3G21390.1 30.293 307 172 7 241 508 21 324 1.49e-35 135
Msa0660150 AT3G21390.1 29.319 191 120 3 335 512 21 209 4.42e-20 92.0
Msa0660150 AT3G21390.2 30.293 307 172 7 241 508 43 346 1.62e-35 136
Msa0660150 AT3G21390.2 29.319 191 120 3 335 512 43 231 5.23e-20 92.0
Msa0660150 AT1G14560.2 31.111 270 158 8 250 496 38 302 8.20e-35 133
Msa0660150 AT1G14560.2 29.412 187 111 4 344 514 38 219 8.32e-20 90.5
Msa0660150 AT5G64970.1 31.562 320 185 8 221 517 117 425 3.21e-34 134
Msa0660150 AT5G66380.1 33.677 291 174 6 241 514 12 300 3.48e-34 131
Msa0660150 AT3G51870.1 30.515 272 165 7 250 512 102 358 4.17e-34 133
Msa0660150 AT3G51870.1 30.409 171 106 3 349 514 107 269 1.44e-17 85.1
Msa0660150 AT3G51870.1 26.136 176 119 3 241 414 193 359 3.17e-14 74.7
Msa0660150 AT5G01500.1 31.868 273 160 9 250 512 130 386 3.08e-33 131
Msa0660150 AT5G01500.1 32.749 171 102 3 349 514 135 297 1.34e-19 91.7
Msa0660150 AT5G01500.1 29.310 174 116 2 241 414 221 387 2.61e-13 72.4
Msa0660150 AT5G64970.2 32.226 301 170 8 240 517 12 301 1.06e-32 127
Msa0660150 AT5G48970.1 29.545 308 174 8 241 508 24 328 2.16e-32 127
Msa0660150 AT5G48970.1 31.088 193 116 4 335 512 24 214 1.53e-20 93.2
Msa0660150 AT5G48970.1 26.190 210 124 6 232 413 126 332 1.39e-14 75.5
Msa0660150 AT3G20240.1 28.990 307 178 7 234 514 47 339 1.74e-29 119
Msa0660150 AT2G47490.1 31.522 276 173 6 251 514 29 300 1.18e-28 116
Msa0660150 AT5G56450.1 26.073 303 198 6 234 515 29 326 1.41e-28 116
Msa0660150 AT1G78180.1 30.693 303 186 5 233 517 122 418 1.67e-28 117
Msa0660150 AT3G53940.2 35.321 218 125 5 239 443 73 287 2.42e-28 114
Msa0660150 AT3G53940.2 32.367 207 126 6 314 511 57 258 5.97e-22 96.7
Msa0660150 AT3G55640.2 34.061 229 129 7 231 443 30 252 4.35e-28 113
Msa0660150 AT3G55640.2 30.288 208 122 7 320 512 25 224 1.90e-20 91.3
Msa0660150 AT3G55640.3 34.061 229 129 7 231 443 30 252 4.35e-28 113
Msa0660150 AT3G55640.3 30.288 208 122 7 320 512 25 224 1.90e-20 91.3
Msa0660150 AT5G48970.2 30.000 260 156 7 272 508 1 257 2.61e-27 111
Msa0660150 AT5G48970.2 34.043 141 89 3 374 512 5 143 2.41e-17 82.8
Msa0660150 AT5G48970.2 26.190 210 124 6 232 413 55 261 3.45e-15 76.3
Msa0660150 AT5G64970.3 30.435 299 174 8 221 496 117 404 5.43e-27 113
Msa0660150 AT5G64970.3 28.649 185 124 3 327 511 129 305 1.39e-13 73.2
Msa0660150 AT2G35800.1 23.030 495 334 13 23 514 355 805 6.39e-27 115
Msa0660150 AT1G25380.1 31.408 277 166 9 251 510 33 302 1.19e-26 111
Msa0660150 AT1G25380.2 31.408 277 166 9 251 510 33 302 1.19e-26 111
Msa0660150 AT1G14560.3 32.161 199 111 6 333 511 25 219 6.08e-26 106
Msa0660150 AT1G14560.3 27.966 118 69 2 413 514 4 121 1.06e-11 65.5
Msa0660150 AT1G14560.3 25.500 200 120 5 239 413 25 220 3.44e-11 63.9
Msa0660150 AT1G74240.1 27.476 313 182 6 237 514 34 336 3.28e-25 107
Msa0660150 AT1G74240.1 26.601 203 122 4 336 515 39 237 1.82e-14 75.5
Msa0660150 AT1G34065.1 28.669 293 171 9 232 515 73 336 1.28e-22 99.8
Msa0660150 AT1G34065.2 28.669 293 171 9 232 515 66 329 1.90e-22 99.0
Msa0660150 AT5G17400.1 28.669 293 183 8 229 502 4 289 2.19e-22 98.2
Msa0660150 AT4G11440.1 26.102 295 208 4 226 516 317 605 8.77e-22 99.4
Msa0660150 AT4G11440.2 26.102 295 208 4 226 516 317 605 8.77e-22 99.4
Msa0660150 AT2G30160.1 27.915 283 186 5 240 511 43 318 2.10e-21 95.9
Msa0660150 AT2G30160.1 27.322 183 123 4 333 514 42 215 3.55e-14 74.3
Msa0660150 AT1G74240.2 26.441 295 172 6 255 514 4 288 3.10e-21 95.1
Msa0660150 AT1G74240.2 25.521 192 116 4 347 515 2 189 1.72e-11 65.9
Msa0660150 AT1G14140.1 26.855 283 186 9 244 511 21 297 1.77e-20 92.4
Msa0660150 AT1G14140.1 27.746 173 117 4 329 493 12 184 6.96e-15 75.9
Msa0660150 AT1G07030.1 28.472 288 181 7 237 511 38 313 1.81e-20 92.8
Msa0660150 AT1G07030.1 27.473 182 124 2 333 514 40 213 1.98e-15 77.8
Msa0660150 AT4G39460.2 29.391 279 169 6 239 514 58 311 1.91e-20 92.8
Msa0660150 AT4G39460.1 29.391 279 169 6 239 514 58 311 1.91e-20 92.8
Msa0660150 AT4G39460.3 29.391 279 169 6 239 514 58 311 1.91e-20 92.8
Msa0660150 AT5G58970.1 26.990 289 188 6 239 512 16 296 4.23e-20 91.3
Msa0660150 AT3G54110.1 28.082 292 185 8 237 512 13 295 1.49e-18 87.0
Msa0660150 AT4G28390.1 27.817 284 177 9 239 502 83 358 1.77e-18 87.8
Msa0660150 AT4G28390.2 27.817 284 177 9 239 502 83 358 1.77e-18 87.8
Msa0660150 AT5G46800.2 26.263 297 189 7 241 514 10 299 2.52e-18 86.3
Msa0660150 AT5G46800.3 26.263 297 189 7 241 514 10 299 2.52e-18 86.3
Msa0660150 AT5G46800.1 26.263 297 189 7 241 514 10 299 2.52e-18 86.3
Msa0660150 AT5G13490.1 27.148 291 171 10 239 502 88 364 3.32e-17 84.0
Msa0660150 AT5G13490.2 27.148 291 171 10 239 502 88 364 3.32e-17 84.0
Msa0660150 AT5G42130.1 26.316 266 178 5 255 511 134 390 6.72e-17 83.2
Msa0660150 AT3G08580.2 26.316 285 181 7 239 502 84 360 1.10e-16 82.4
Msa0660150 AT3G08580.1 26.316 285 181 7 239 502 84 360 1.10e-16 82.4
Msa0660150 AT1G79900.1 24.621 264 191 2 245 508 22 277 4.98e-16 79.3
Msa0660150 AT1G79900.1 30.409 171 111 4 242 409 112 277 2.45e-14 74.3
Msa0660150 AT3G05290.1 27.703 296 175 12 241 510 13 295 2.10e-15 77.8
Msa0660150 AT2G39970.1 24.176 273 171 10 278 516 53 323 5.42e-15 76.6
Msa0660150 AT5G15640.2 24.013 304 207 7 229 512 11 310 1.40e-14 75.1
Msa0660150 AT5G27520.1 28.231 294 176 11 241 510 15 297 3.08e-14 74.3
Msa0660150 AT2G33820.1 25.249 301 192 11 239 516 18 308 3.92e-14 73.9
Msa0660150 AT5G01340.1 23.345 287 195 9 240 510 18 295 5.86e-14 73.2
Msa0660150 AT5G26200.1 27.273 308 195 10 231 512 31 335 6.46e-14 73.6
Msa0660150 AT5G26200.1 28.378 222 132 8 222 417 119 339 3.41e-11 65.1
Msa0660150 AT2G26360.1 25.532 282 194 7 234 514 110 376 7.47e-14 73.9
Msa0660150 AT5G15640.1 23.826 298 203 7 235 512 24 317 9.63e-14 72.8
Msa0660150 AT4G27940.1 24.506 253 169 5 278 511 155 404 1.13e-12 70.5
Msa0660150 AT3G48850.1 27.119 177 120 3 335 509 73 242 2.31e-12 68.9
Msa0660150 AT3G48850.1 29.258 229 146 7 232 447 60 285 3.28e-11 65.5
Msa0660150 AT4G24570.1 23.750 320 189 9 237 514 4 310 4.50e-12 67.8
Msa0660150 AT2G33820.3 24.595 309 192 12 239 516 18 316 5.90e-12 67.4
Msa0660150 AT1G72820.1 22.581 310 208 7 235 512 27 336 6.78e-12 67.4
Msa0660150 AT1G72820.1 25.974 231 135 7 222 417 111 340 9.13e-12 67.0
Msa0660150 AT1G72820.2 22.581 310 208 7 235 512 27 336 6.78e-12 67.4
Msa0660150 AT1G72820.2 25.974 231 135 7 222 417 111 340 9.13e-12 67.0
Msa0660150 AT5G14040.1 26.344 186 122 5 330 510 79 254 7.90e-12 67.4
Msa0660150 AT5G14040.1 29.200 250 159 9 242 477 84 329 4.69e-11 65.1
Msa0660150 AT4G03115.3 23.860 285 191 7 238 511 69 338 4.27e-11 65.1
Msa0660150 AT4G03115.2 26.923 182 117 6 337 514 42 211 6.47e-11 62.8
Msa0660150 AT4G03115.1 23.860 285 191 7 238 511 37 306 7.87e-11 63.9
Msa0660150 AT4G03115.4 26.923 182 117 6 337 514 42 211 9.28e-11 62.4

Find 166 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTCGGGGTTTCAAAATT+TGG 0.134740 4_3:+70717221 None:intergenic
TGCTACTAACAAAGGGTATT+TGG 0.164478 4_3:-70716995 Msa0660150:CDS
TGGCAACGAGACGGTTTATT+AGG 0.203876 4_3:-70715000 Msa0660150:CDS
CTTGGATGTGGGACAGTTTC+GGG 0.228064 4_3:-70714421 Msa0660150:CDS
GGCCTTGTTCCATCTCTTCT+TGG 0.236132 4_3:-70714673 Msa0660150:CDS
GTCAGATATAATATATTTCT+TGG 0.259740 4_3:+70714594 None:intergenic
AACTAAAAGTTTGAGAAATT+AGG 0.269661 4_3:-70713448 Msa0660150:three_prime_UTR
AGAAGTCGCCGGAGATGATT+TGG 0.282313 4_3:+70717143 None:intergenic
TTCAATGGATCATGTTCTAT+TGG 0.289968 4_3:-70717079 Msa0660150:CDS
TCCTTAGCATATTTATATTC+AGG 0.292787 4_3:+70716928 None:intergenic
ACCACCTCTCTTCAAATTTC+AGG 0.299337 4_3:-70717510 Msa0660150:intron
CTCGAAAGCCTTCGTCCTTA+AGG 0.303116 4_3:+70713755 None:intergenic
GGCACAACTTTGAGGAGATT+TGG 0.303845 4_3:+70713712 None:intergenic
TTCAAATTCAAATGCTTCAC+TGG 0.314602 4_3:-70717257 Msa0660150:five_prime_UTR
CGCCGGAGATGATTTGGGTT+TGG 0.315050 4_3:+70717149 None:intergenic
TATTCTTCCTGAAGAACTTT+GGG 0.325825 4_3:-70716776 Msa0660150:CDS
TGTTCGGGGTTTCAAAATTT+GGG 0.337056 4_3:+70717222 None:intergenic
GCTGATTTCAAATGTTATAT+AGG 0.340376 4_3:-70713605 Msa0660150:three_prime_UTR
ACCCACGTGGTCCATGTCTA+TGG 0.340694 4_3:+70717176 None:intergenic
TTCATAAGCATAAAACTTGA+TGG 0.341735 4_3:+70714927 None:intergenic
TCTATATATATCAAGTTATT+AGG 0.343183 4_3:-70713416 Msa0660150:three_prime_UTR
ACTTGGATGTGGGACAGTTT+CGG 0.345888 4_3:-70714422 Msa0660150:CDS
GAACCCTTACAAAGGATATA+TGG 0.347440 4_3:-70714726 Msa0660150:CDS
TCGAAAGCCTTCGTCCTTAA+GGG 0.350475 4_3:+70713756 None:intergenic
CTTCATTACTGCTGGCATAA+TGG 0.353220 4_3:+70715026 None:intergenic
AGAGCATCCCAAAGTTCTTC+AGG 0.374338 4_3:+70716769 None:intergenic
TGCAGCATCAAAGCTGGCTT+TGG 0.374489 4_3:+70715374 None:intergenic
TGCCATGCTTCTCAGGCTGC+AGG 0.378131 4_3:-70713836 Msa0660150:intron
GGCAACGAGACGGTTTATTA+GGG 0.381008 4_3:-70714999 Msa0660150:CDS
GCTATTGATGTTGAACATAA+TGG 0.381502 4_3:-70716802 Msa0660150:CDS
CAACACTTCTAGTGCTTACA+AGG 0.382786 4_3:-70713803 Msa0660150:CDS
GGGTAAAGTACATATCAAAA+TGG 0.390966 4_3:+70713387 None:intergenic
GGATCCATATATCCTTTGTA+AGG 0.391902 4_3:+70714722 None:intergenic
TTTCTTGGATATATCTTTCA+AGG 0.392181 4_3:+70714609 None:intergenic
GTATTCTTCCTGAAGAACTT+TGG 0.396947 4_3:-70716777 Msa0660150:CDS
ATGATCCATTGAAATTGAAC+CGG 0.400793 4_3:+70717089 None:intergenic
TATCCTTTGTAAGGGTTCCT+AGG 0.406046 4_3:+70714731 None:intergenic
AAAACCCGGTTCAATTTCAA+TGG 0.412723 4_3:-70717094 Msa0660150:CDS
TGCCAGCAGTAATGAAGATA+TGG 0.415808 4_3:-70715020 Msa0660150:CDS
GAAGTCGCCGGAGATGATTT+GGG 0.420586 4_3:+70717144 None:intergenic
CAAGGGAACAAGTCAGATAT+TGG 0.420941 4_3:-70714877 Msa0660150:CDS
TTTGTAAGGGTTCCTAGGTT+CGG 0.421581 4_3:+70714736 None:intergenic
GGGACAGTTTCGGGAGCTCT+TGG 0.425562 4_3:-70714412 Msa0660150:CDS
CTTTGTTGAGCATGTTGATA+AGG 0.428962 4_3:-70715319 Msa0660150:CDS
ATAACATTTGAAATCAGCTC+TGG 0.430191 4_3:+70713610 None:intergenic
AAGAAAGGGATGTTCGTATT+CGG 0.433508 4_3:-70717038 Msa0660150:CDS
TTAATATAAGACACTAATAG+TGG 0.434861 4_3:+70713366 None:intergenic
ACATGCTTGCTGATGCCTTC+AGG 0.436950 4_3:+70715162 None:intergenic
CATGTTGATAAGGATAATAA+TGG 0.437979 4_3:-70715309 Msa0660150:CDS
TGCCATATCTTCATTACTGC+TGG 0.447668 4_3:+70715018 None:intergenic
CTTGGTATGATTCCTTATGC+AGG 0.448812 4_3:-70714655 Msa0660150:CDS
TGAAAATATATATCAACATT+GGG 0.450630 4_3:-70715226 Msa0660150:CDS
TTGCAGCCGGCACAACTTTG+AGG 0.450795 4_3:+70713704 None:intergenic
ATTGGCTTTGCGTGAGACTA+AGG 0.453356 4_3:-70717061 Msa0660150:CDS
AGAAAGCCCGGGGTCCCTCT+TGG 0.455646 4_3:+70714701 None:intergenic
CATTGGATCTTATCAAAACT+AGG 0.459278 4_3:-70714792 Msa0660150:CDS
AGCATTTGAATTTGAAGAAG+TGG 0.460556 4_3:+70717264 None:intergenic
AGGACATCTTAAAATGTTGA+TGG 0.463643 4_3:-70713585 Msa0660150:three_prime_UTR
GATTATGCTCACATTGAAGC+AGG 0.464288 4_3:-70716973 Msa0660150:CDS
TTACAAGTAGTGATTCTTCA+AGG 0.464396 4_3:-70713523 Msa0660150:three_prime_UTR
CACAGCATAAAACACATGTC+TGG 0.464489 4_3:-70717201 Msa0660150:exon
TTGAAGAGAGGTGGTGATGA+CGG 0.467107 4_3:+70717518 None:intergenic
TGGGATGCTCTTGTCAAGGC+TGG 0.469628 4_3:-70716757 Msa0660150:intron
GGACCCCGGGCTTTCTATAG+AGG 0.470590 4_3:-70714694 Msa0660150:CDS
GGCTGCAAGTATTACTTACA+TGG 0.473791 4_3:-70713689 Msa0660150:CDS
TTCTTTGATGCTACTAACAA+AGG 0.474500 4_3:-70717003 Msa0660150:CDS
CAAGGCCTCTATAGAAAGCC+CGG 0.474710 4_3:+70714689 None:intergenic
AATCCCTGCAGCATCAAAGC+TGG 0.477739 4_3:+70715368 None:intergenic
GTAATGGTGGATAGAATTGA+TGG 0.482284 4_3:-70713299 Msa0660150:three_prime_UTR
TGATGGACGACATTCTTATG+AGG 0.483672 4_3:-70713282 Msa0660150:three_prime_UTR
GTGAGATCAATGCCTGCATA+AGG 0.489678 4_3:+70714643 None:intergenic
TTGAAAATATATATCAACAT+TGG 0.489803 4_3:-70715227 Msa0660150:CDS
CTTGTAAGCACTAGAAGTGT+TGG 0.492262 4_3:+70713804 None:intergenic
AAAGCCAGCTTTGATGCTGC+AGG 0.493076 4_3:-70715372 Msa0660150:CDS
TATCATAAATATATACAGAT+TGG 0.493944 4_3:-70713333 Msa0660150:three_prime_UTR
CTTAAGGACGAAGGCTTTCG+AGG 0.496296 4_3:-70713754 Msa0660150:CDS
TGCGTGAGACTAAGGAAGAA+AGG 0.499336 4_3:-70717053 Msa0660150:CDS
TAAAACTTGATGGCGCTCTC+AGG 0.501460 4_3:+70714937 None:intergenic
CCTGGTCCTCTAGTACAACT+TGG 0.503374 4_3:-70714439 Msa0660150:CDS
TACTTGTGTCTATCCACTGC+AGG 0.508122 4_3:-70714386 Msa0660150:CDS
CTCCAAACCCAAATCATCTC+CGG 0.511140 4_3:-70717151 Msa0660150:CDS
CTTGTTCTCCAATGTCTACA+AGG 0.511918 4_3:+70715193 None:intergenic
CACTGCAGGTTATTCGTACA+AGG 0.514518 4_3:-70714372 Msa0660150:intron
ACAGCATAAAACACATGTCT+GGG 0.515812 4_3:-70717200 Msa0660150:exon
TCTTTGATGCTACTAACAAA+GGG 0.519028 4_3:-70717002 Msa0660150:CDS
TGCTCCTCTTGATCGTCTAA+AGG 0.526318 4_3:-70715079 Msa0660150:CDS
ACAGATTGCTATCTATCCAT+TGG 0.526332 4_3:-70714809 Msa0660150:CDS
CCTCTAGTACAACTTGGATG+TGG 0.526958 4_3:-70714433 Msa0660150:CDS
AAGTCAGATATTGGTACTGC+CGG 0.527417 4_3:-70714868 Msa0660150:CDS
AAATCTCCTCAAAGTTGTGC+CGG 0.530979 4_3:-70713710 Msa0660150:CDS
GATCCATATATCCTTTGTAA+GGG 0.533301 4_3:+70714723 None:intergenic
TCAAATTCAAATGCTTCACT+GGG 0.534194 4_3:-70717256 Msa0660150:five_prime_UTR
TGATCCATTGAAATTGAACC+GGG 0.535986 4_3:+70717090 None:intergenic
AAAATGAGAGTAATTAAGAG+AGG 0.541868 4_3:+70717622 None:intergenic
CCAAGTTGTACTAGAGGACC+AGG 0.543145 4_3:+70714439 None:intergenic
ACTTCTCCGACCACCGATCA+CGG 0.543289 4_3:-70717126 Msa0660150:CDS
TATGGATCCAAGAGGGACCC+CGG 0.549177 4_3:-70714708 Msa0660150:CDS
GCGTGAGACTAAGGAAGAAA+GGG 0.551313 4_3:-70717052 Msa0660150:CDS
GGAATCATACCAAGAAGAGA+TGG 0.555459 4_3:+70714664 None:intergenic
CAGACATGTGCGTCTGAAGG+TGG 0.558424 4_3:-70714766 Msa0660150:CDS
AGGCTTTCGAGGGTTCTACA+AGG 0.560865 4_3:-70713743 Msa0660150:CDS
TGCGTTCGTTATGTTTGATG+CGG 0.561688 4_3:+70717584 None:intergenic
TTAGCATATTTATATTCAGG+TGG 0.563760 4_3:+70716931 None:intergenic
GGTGGAAAGGCTCCGAACCT+AGG 0.563950 4_3:-70714748 Msa0660150:CDS
CTACTTGTAATAGTGCCTAC+AGG 0.565305 4_3:+70713536 None:intergenic
ATTTGTGATGCTGATAGAGA+TGG 0.565356 4_3:-70716895 Msa0660150:CDS
CATGTCTGGGGCCATAGACA+TGG 0.566057 4_3:-70717187 Msa0660150:CDS
ATGGATCCAAGAGGGACCCC+GGG 0.571593 4_3:-70714707 Msa0660150:CDS
ATATATATCAACATTGGGAG+AGG 0.571984 4_3:-70715221 Msa0660150:CDS
AAGGCCTCTATAGAAAGCCC+GGG 0.573250 4_3:+70714690 None:intergenic
CCGACCACCGATCACGGCCG+TGG 0.575645 4_3:-70717120 Msa0660150:CDS
ACCTGAATATAAATATGCTA+AGG 0.576019 4_3:-70716929 Msa0660150:CDS
GTGGTCTTACAAATTCAGAC+TGG 0.577576 4_3:-70715057 Msa0660150:CDS
CTCTAGTACAACTTGGATGT+GGG 0.578834 4_3:-70714432 Msa0660150:CDS
AGGGTATGCCTTGTAGACAT+TGG 0.583161 4_3:-70715201 Msa0660150:CDS
AAGTAGTGATTCTTCAAGGA+GGG 0.583742 4_3:-70713519 Msa0660150:three_prime_UTR
GCATCAGCAAGCATGTGCAC+AGG 0.584381 4_3:-70715155 Msa0660150:CDS
AATGTAATTGGAGATAGTCA+AGG 0.585996 4_3:-70714895 Msa0660150:CDS
TGGAAAACCCTTAAGGACGA+AGG 0.588718 4_3:-70713763 Msa0660150:CDS
TAATATAAGACACTAATAGT+GGG 0.588803 4_3:+70713367 None:intergenic
CTTGTACGAATAACCTGCAG+TGG 0.590465 4_3:+70714373 None:intergenic
ATTGGCGCATGGCTTTGTAA+TGG 0.592596 4_3:-70713315 Msa0660150:three_prime_UTR
TAATGGGTTGAATGTTGTGA+AGG 0.593361 4_3:-70714965 Msa0660150:CDS
TTAAGGACGAAGGCTTTCGA+GGG 0.595236 4_3:-70713753 Msa0660150:CDS
GGCGCATGGCTTTGTAATGG+TGG 0.601202 4_3:-70713312 Msa0660150:three_prime_UTR
GAGAGATTAACTAATCCTGT+AGG 0.601229 4_3:-70713551 Msa0660150:three_prime_UTR
ACTTTGGGATGCTCTTGTCA+AGG 0.602469 4_3:-70716761 Msa0660150:CDS
ACCTGAAATTTGAAGAGAGG+TGG 0.603519 4_3:+70717509 None:intergenic
TAACATTTGAAATCAGCTCT+GGG 0.606800 4_3:+70713611 None:intergenic
ATGTAATTGGAGATAGTCAA+GGG 0.608848 4_3:-70714894 Msa0660150:CDS
ACCACCTTTAGACGATCAAG+AGG 0.609465 4_3:+70715075 None:intergenic
TTTACCACGGCCGTGATCGG+TGG 0.612531 4_3:+70717116 None:intergenic
AAGCCAGCTTTGATGCTGCA+GGG 0.613413 4_3:-70715371 Msa0660150:CDS
ATTATGCTCACATTGAAGCA+GGG 0.615028 4_3:-70716972 Msa0660150:CDS
TAAGCACTAGAAGTGTTGGT+AGG 0.615335 4_3:+70713808 None:intergenic
TTTGTGATGCTGATAGAGAT+GGG 0.615874 4_3:-70716894 Msa0660150:CDS
ATGTGCGTCTGAAGGTGGAA+AGG 0.616080 4_3:-70714761 Msa0660150:CDS
GAACAAGCTGTCATTCCTGA+AGG 0.618005 4_3:-70715177 Msa0660150:CDS
GGCTTTCGAGGGTTCTACAA+GGG 0.618467 4_3:-70713742 Msa0660150:CDS
TATATATCAACATTGGGAGA+GGG 0.618834 4_3:-70715220 Msa0660150:CDS
GGCCATAGACATGGACCACG+TGG 0.619134 4_3:-70717178 Msa0660150:CDS
GGTACCTGAAATTTGAAGAG+AGG 0.619972 4_3:+70717506 None:intergenic
TTACAGACATGTGCGTCTGA+AGG 0.627961 4_3:-70714769 Msa0660150:CDS
CAACATTCAACCCATTACCT+CGG 0.628881 4_3:+70714971 None:intergenic
ATGTAAGTAATACTTGCAGC+CGG 0.630205 4_3:+70713691 None:intergenic
TCCTCTTGATCGTCTAAAGG+TGG 0.632322 4_3:-70715076 Msa0660150:CDS
CCACGGCCGTGATCGGTGGT+CGG 0.632763 4_3:+70717120 None:intergenic
CCACATCCAAGTTGTACTAG+AGG 0.639833 4_3:+70714433 None:intergenic
AATATATACAGATTGGCGCA+TGG 0.642492 4_3:-70713326 Msa0660150:three_prime_UTR
ATAGATAGCAATCTGTGCAA+TGG 0.645374 4_3:+70714816 None:intergenic
TCGGTGGTCGGAGAAGTCGC+CGG 0.645691 4_3:+70717132 None:intergenic
CTTACAAATTCAGACTGGAA+AGG 0.645930 4_3:-70715052 Msa0660150:CDS
AAGGATATATGGATCCAAGA+GGG 0.650322 4_3:-70714715 Msa0660150:CDS
TACCAAGAAGAGATGGAACA+AGG 0.652820 4_3:+70714671 None:intergenic
AACACTTCTAGTGCTTACAA+GGG 0.655900 4_3:-70713802 Msa0660150:CDS
AAATATATTATATCTGACCA+TGG 0.657158 4_3:-70714589 Msa0660150:intron
ATGAAGATATGGCAACGAGA+CGG 0.675716 4_3:-70715009 Msa0660150:CDS
CAAGTAGTGATTCTTCAAGG+AGG 0.676445 4_3:-70713520 Msa0660150:three_prime_UTR
GAGTAATTAAGAGAGGAGAG+AGG 0.677873 4_3:+70717629 None:intergenic
TGCAGGGATTGAAATTGATG+AGG 0.683016 4_3:-70715355 Msa0660150:CDS
GCCATAGACATGGACCACGT+GGG 0.686014 4_3:-70717177 Msa0660150:CDS
AAAGGATATATGGATCCAAG+AGG 0.690784 4_3:-70714716 Msa0660150:CDS
GAACCTAGGAACCCTTACAA+AGG 0.697269 4_3:-70714734 Msa0660150:CDS
CAGCATAAAACACATGTCTG+GGG 0.712096 4_3:-70717199 Msa0660150:exon
AGGCCTCTATAGAAAGCCCG+GGG 0.730497 4_3:+70714691 None:intergenic
TGGGTTTGGAGAAACCCACG+TGG 0.761132 4_3:+70717163 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTAAAAATAAAATA+AGG + chr4_3:70713348-70713367 None:intergenic 0.0%
!!! TACATATTTTATAACAAATA+GGG - chr4_3:70714384-70714403 Msa0660150:CDS 10.0%
!! AATTTATCAATAAGAATATA+AGG + chr4_3:70716394-70716413 None:intergenic 10.0%
!!! TAAAAGGTTAAATTTTATTT+TGG + chr4_3:70717010-70717029 None:intergenic 10.0%
!!! CCATTTTTTAAAATTATAAC+CGG + chr4_3:70714273-70714292 None:intergenic 15.0%
!!! CTACATATTTTATAACAAAT+AGG - chr4_3:70714383-70714402 Msa0660150:CDS 15.0%
!! TTAATAAAAACAAGAGAAAA+CGG + chr4_3:70714949-70714968 None:intergenic 15.0%
!! ATATATATGAGTTATAACTA+TGG + chr4_3:70715143-70715162 None:intergenic 15.0%
!!! ATGTTGATATATATTTTCAA+GGG + chr4_3:70715676-70715695 None:intergenic 15.0%
!!! AATGTTGATATATATTTTCA+AGG + chr4_3:70715677-70715696 None:intergenic 15.0%
!! TTGAAAATATATATCAACAT+TGG - chr4_3:70715676-70715695 Msa0660150:intron 15.0%
!! TGAAAATATATATCAACATT+GGG - chr4_3:70715677-70715696 Msa0660150:intron 15.0%
!! TACATTGTATAAATTCTAAA+AGG + chr4_3:70717026-70717045 None:intergenic 15.0%
!! TCTATATATATCAAGTTATT+AGG - chr4_3:70717487-70717506 Msa0660150:intron 15.0%
!! TATCATAAATATATACAGAT+TGG - chr4_3:70717570-70717589 Msa0660150:five_prime_UTR 15.0%
!! TGAATTGAAAAATAAGTCAA+AGG + chr4_3:70713510-70713529 None:intergenic 20.0%
!!! TATTTTTTTTTCTTCACTTG+CGG - chr4_3:70713547-70713566 Msa0660150:three_prime_UTR 20.0%
!!! TTGATTATCATGATTTTAGA+CGG - chr4_3:70714036-70714055 Msa0660150:intron 20.0%
!!! CCGGTTATAATTTTAAAAAA+TGG - chr4_3:70714270-70714289 Msa0660150:intron 20.0%
!!! ATATTTTATAACAAATAGGG+AGG - chr4_3:70714387-70714406 Msa0660150:CDS 20.0%
!! GCTATAGTAAACATTAATAT+TGG - chr4_3:70714451-70714470 Msa0660150:intron 20.0%
!! TAGTAAACATTAATATTGGT+TGG - chr4_3:70714455-70714474 Msa0660150:intron 20.0%
!!! AGTAAACATTAATATTGGTT+GGG - chr4_3:70714456-70714475 Msa0660150:intron 20.0%
!! AACATACTAACATCAAAAAA+AGG + chr4_3:70714522-70714541 None:intergenic 20.0%
!! GCTTATAGAAAAAATTTCAA+AGG - chr4_3:70715261-70715280 Msa0660150:CDS 20.0%
!! AATAACTCTATGAATTTGTA+TGG - chr4_3:70715293-70715312 Msa0660150:CDS 20.0%
!! GGCATTATTATTTATATACT+AGG - chr4_3:70715428-70715447 Msa0660150:intron 20.0%
!! ATTTATATACTAGGTCTTTA+AGG - chr4_3:70715437-70715456 Msa0660150:intron 20.0%
!! GTCAGATATAATATATTTCT+TGG + chr4_3:70716312-70716331 None:intergenic 20.0%
!! AAATATATTATATCTGACCA+TGG - chr4_3:70716314-70716333 Msa0660150:intron 20.0%
!!! ATATGTCCTTTAGTTATTTT+AGG - chr4_3:70716676-70716695 Msa0660150:intron 20.0%
!! AACTAAAAGTTTGAGAAATT+AGG - chr4_3:70717455-70717474 Msa0660150:intron 20.0%
!! TAATATAAGACACTAATAGT+GGG + chr4_3:70717539-70717558 None:intergenic 20.0%
!! TTAATATAAGACACTAATAG+TGG + chr4_3:70717540-70717559 None:intergenic 20.0%
! AAAATGAGAGTAATTAAGAG+AGG + chr4_3:70713284-70713303 None:intergenic 25.0%
!! TTACTCTCATTTTCTTTCTA+CGG - chr4_3:70713291-70713310 Msa0660150:three_prime_UTR 25.0%
! AATTTAAGAGAAGAAGAAGA+AGG + chr4_3:70713421-70713440 None:intergenic 25.0%
! TTAGCATATTTATATTCAGG+TGG + chr4_3:70713975-70713994 None:intergenic 25.0%
! ACCTGAATATAAATATGCTA+AGG - chr4_3:70713974-70713993 Msa0660150:intron 25.0%
! TCCTTAGCATATTTATATTC+AGG + chr4_3:70713978-70713997 None:intergenic 25.0%
! AAGTGACATAATTAACAAGA+GGG + chr4_3:70714185-70714204 None:intergenic 25.0%
! TAAGTGACATAATTAACAAG+AGG + chr4_3:70714186-70714205 None:intergenic 25.0%
!! GTAAACATTAATATTGGTTG+GGG - chr4_3:70714457-70714476 Msa0660150:intron 25.0%
!! TAAACATTAATATTGGTTGG+GGG - chr4_3:70714458-70714477 Msa0660150:intron 25.0%
!! TTTTGATGTTAGTATGTTGT+TGG - chr4_3:70714524-70714543 Msa0660150:intron 25.0%
! AACTCAATCTCATTTAGAAA+AGG + chr4_3:70714715-70714734 None:intergenic 25.0%
!! AGATATTTTCCCATTTTAGA+AGG + chr4_3:70714749-70714768 None:intergenic 25.0%
! AAATGGGAAAATATCTCATA+TGG - chr4_3:70714753-70714772 Msa0660150:CDS 25.0%
! ACAATGAGAAAATGAAACAA+GGG + chr4_3:70715495-70715514 None:intergenic 25.0%
! TACAATGAGAAAATGAAACA+AGG + chr4_3:70715496-70715515 None:intergenic 25.0%
!! CATGTTGATAAGGATAATAA+TGG - chr4_3:70715594-70715613 Msa0660150:intron 25.0%
!!! GAATTATCACTTTTGAAGAA+TGG - chr4_3:70715616-70715635 Msa0660150:intron 25.0%
! TTCATAAGCATAAAACTTGA+TGG + chr4_3:70715979-70715998 None:intergenic 25.0%
! GAAATGCTGAAAAATGTAAT+TGG - chr4_3:70715996-70716015 Msa0660150:intron 25.0%
! TTTCTTGGATATATCTTTCA+AGG + chr4_3:70716297-70716316 None:intergenic 25.0%
!! AAGAAGAAAAGAGCATAAAA+AGG + chr4_3:70716437-70716456 None:intergenic 25.0%
!!! CTTGATAGCTAGTTTTATAA+TGG - chr4_3:70716640-70716659 Msa0660150:intron 25.0%
! AAAAAAACTTAAGGACCAAA+GGG + chr4_3:70716705-70716724 None:intergenic 25.0%
! AAAAAAAACTTAAGGACCAA+AGG + chr4_3:70716706-70716725 None:intergenic 25.0%
! AGTGGAACAAAAAAAACTTA+AGG + chr4_3:70716714-70716733 None:intergenic 25.0%
!!! AAGTTTTTTTTGTTCCACTT+TGG - chr4_3:70716715-70716734 Msa0660150:intron 25.0%
! GTCTAACATTCGTAAATTAA+GGG + chr4_3:70716742-70716761 None:intergenic 25.0%
! TGTCTAACATTCGTAAATTA+AGG + chr4_3:70716743-70716762 None:intergenic 25.0%
!! TTTACGAATGTTAGACATTT+TGG - chr4_3:70716746-70716765 Msa0660150:intron 25.0%
! CAAATGAAAAACTGAAAGAA+AGG - chr4_3:70716894-70716913 Msa0660150:CDS 25.0%
! AATCTGTAACATTTGTAACT+TGG - chr4_3:70716922-70716941 Msa0660150:CDS 25.0%
! ATCTGTAACATTTGTAACTT+GGG - chr4_3:70716923-70716942 Msa0660150:CDS 25.0%
!!! AAGTTTTTTTCGTTCCATTT+TGG + chr4_3:70716950-70716969 None:intergenic 25.0%
! AATGGAACGAAAAAAACTTA+AGG - chr4_3:70716951-70716970 Msa0660150:CDS 25.0%
! ATGGAACGAAAAAAACTTAA+GGG - chr4_3:70716952-70716971 Msa0660150:CDS 25.0%
!! GCTGATTTCAAATGTTATAT+AGG - chr4_3:70717298-70717317 Msa0660150:intron 25.0%
GAAAAAATGTGGGATTAGAT+GGG + chr4_3:70713598-70713617 None:intergenic 30.0%
AGAAAAAATGTGGGATTAGA+TGG + chr4_3:70713599-70713618 None:intergenic 30.0%
TCTGAAGAGAGAAAAAATGT+GGG + chr4_3:70713608-70713627 None:intergenic 30.0%
ATCTGAAGAGAGAAAAAATG+TGG + chr4_3:70713609-70713628 None:intergenic 30.0%
AGCATTTGAATTTGAAGAAG+TGG + chr4_3:70713642-70713661 None:intergenic 30.0%
TTCAAATTCAAATGCTTCAC+TGG - chr4_3:70713646-70713665 Msa0660150:exon 30.0%
TCAAATTCAAATGCTTCACT+GGG - chr4_3:70713647-70713666 Msa0660150:exon 30.0%
ATGATCCATTGAAATTGAAC+CGG + chr4_3:70713817-70713836 None:intergenic 30.0%
TTCAATGGATCATGTTCTAT+TGG - chr4_3:70713824-70713843 Msa0660150:CDS 30.0%
TTCTTTGATGCTACTAACAA+AGG - chr4_3:70713900-70713919 Msa0660150:intron 30.0%
TCTTTGATGCTACTAACAAA+GGG - chr4_3:70713901-70713920 Msa0660150:intron 30.0%
! TCATGATTTTAGACGGTATA+TGG - chr4_3:70714043-70714062 Msa0660150:intron 30.0%
GCTATTGATGTTGAACATAA+TGG - chr4_3:70714101-70714120 Msa0660150:intron 30.0%
TATTCTTCCTGAAGAACTTT+GGG - chr4_3:70714127-70714146 Msa0660150:intron 30.0%
AGTGACATAATTAACAAGAG+GGG + chr4_3:70714184-70714203 None:intergenic 30.0%
! AAACATTAATATTGGTTGGG+GGG - chr4_3:70714459-70714478 Msa0660150:intron 30.0%
AAAAAGGAATAAGCATGCAA+TGG + chr4_3:70714506-70714525 None:intergenic 30.0%
AATGAGATTGAGTTTCACAA+AGG - chr4_3:70714721-70714740 Msa0660150:CDS 30.0%
!! ACAAAGGTTCCTTCTAAAAT+GGG - chr4_3:70714737-70714756 Msa0660150:CDS 30.0%
GTACGAAACAATACAACAAT+CGG - chr4_3:70714795-70714814 Msa0660150:CDS 30.0%
ACATGAGTTTCTCATCTTAT+GGG + chr4_3:70714829-70714848 None:intergenic 30.0%
TACATGAGTTTCTCATCTTA+TGG + chr4_3:70714830-70714849 None:intergenic 30.0%
AATTGAAACAGTGATCCAAT+CGG - chr4_3:70714864-70714883 Msa0660150:CDS 30.0%
!!! TTCCTTGTTTTTTACTGAAC+CGG + chr4_3:70714892-70714911 None:intergenic 30.0%
AAACAAGAGAAAACGGATAT+AGG + chr4_3:70714942-70714961 None:intergenic 30.0%
TTGAAAATCGGTCAAAACTT+TGG + chr4_3:70715051-70715070 None:intergenic 30.0%
AAAAGAAACATGCATTCACA+AGG + chr4_3:70715227-70715246 None:intergenic 30.0%
TATGAATTTGTATGGTGTGT+GGG - chr4_3:70715301-70715320 Msa0660150:CDS 30.0%
ATCAAAGATTGAAGTCGAAT+CGG + chr4_3:70715345-70715364 None:intergenic 30.0%
! TATATACTAGGTCTTTAAGG+TGG - chr4_3:70715440-70715459 Msa0660150:intron 30.0%
TGGAAAAATCTTCCACAAAA+GGG + chr4_3:70715470-70715489 None:intergenic 30.0%
ATGGAAAAATCTTCCACAAA+AGG + chr4_3:70715471-70715490 None:intergenic 30.0%
ATATATATCAACATTGGGAG+AGG - chr4_3:70715682-70715701 Msa0660150:intron 30.0%
TATATATCAACATTGGGAGA+GGG - chr4_3:70715683-70715702 Msa0660150:intron 30.0%
AATGTAATTGGAGATAGTCA+AGG - chr4_3:70716008-70716027 Msa0660150:intron 30.0%
ATGTAATTGGAGATAGTCAA+GGG - chr4_3:70716009-70716028 Msa0660150:intron 30.0%
!!! CTAGTTTTGATAAGATCCAA+TGG + chr4_3:70716113-70716132 None:intergenic 30.0%
CATTGGATCTTATCAAAACT+AGG - chr4_3:70716111-70716130 Msa0660150:intron 30.0%
GATCCATATATCCTTTGTAA+GGG + chr4_3:70716183-70716202 None:intergenic 30.0%
GTGGCAAAAATATAATACCA+TGG + chr4_3:70716334-70716353 None:intergenic 30.0%
TAAGTTAAAGAGATCAAGAG+TGG + chr4_3:70716353-70716372 None:intergenic 30.0%
CCAGAGAAAAACATTACTTA+TGG + chr4_3:70716569-70716588 None:intergenic 30.0%
! CCATAAGTAATGTTTTTCTC+TGG - chr4_3:70716566-70716585 Msa0660150:intron 30.0%
!! ACACTCATTATTTGCTTTTG+GGG + chr4_3:70716600-70716619 None:intergenic 30.0%
!! CACACTCATTATTTGCTTTT+GGG + chr4_3:70716601-70716620 None:intergenic 30.0%
CAAAAGCAAATAATGAGTGT+GGG - chr4_3:70716600-70716619 Msa0660150:intron 30.0%
GGGAAACCTAAAATAACTAA+AGG + chr4_3:70716685-70716704 None:intergenic 30.0%
!!! AGTTATTTTAGGTTTCCCTT+TGG - chr4_3:70716687-70716706 Msa0660150:intron 30.0%
AAGAAGGAAACACAAGAAAT+GGG - chr4_3:70716856-70716875 Msa0660150:CDS 30.0%
!!! GTTGTTTTCAGGTTTTACTT+TGG + chr4_3:70716979-70716998 None:intergenic 30.0%
TAAAACCTGAAAACAACTCA+AGG - chr4_3:70716982-70717001 Msa0660150:CDS 30.0%
!!! TGTTTTTTGGAAAACCCTTA+AGG - chr4_3:70717133-70717152 Msa0660150:CDS 30.0%
! TAACATTTGAAATCAGCTCT+GGG + chr4_3:70717295-70717314 None:intergenic 30.0%
! ATAACATTTGAAATCAGCTC+TGG + chr4_3:70717296-70717315 None:intergenic 30.0%
AGGACATCTTAAAATGTTGA+TGG - chr4_3:70717318-70717337 Msa0660150:intron 30.0%
TTACAAGTAGTGATTCTTCA+AGG - chr4_3:70717380-70717399 Msa0660150:intron 30.0%
!!! TTTTAGTTCAGATAAGCAAG+GGG + chr4_3:70717443-70717462 None:intergenic 30.0%
!!! CTTTTAGTTCAGATAAGCAA+GGG + chr4_3:70717444-70717463 None:intergenic 30.0%
!!! ACTTTTAGTTCAGATAAGCA+AGG + chr4_3:70717445-70717464 None:intergenic 30.0%
GGGTAAAGTACATATCAAAA+TGG + chr4_3:70717519-70717538 None:intergenic 30.0%
!!! TTTTTTTTCTTCACTTGCGG+CGG - chr4_3:70713550-70713569 Msa0660150:three_prime_UTR 35.0%
TGTTCGGGGTTTCAAAATTT+GGG + chr4_3:70713684-70713703 None:intergenic 35.0%
! ATGTGTTTTATGCTGTGTTC+GGG + chr4_3:70713699-70713718 None:intergenic 35.0%
! CATGTGTTTTATGCTGTGTT+CGG + chr4_3:70713700-70713719 None:intergenic 35.0%
ACAGCATAAAACACATGTCT+GGG - chr4_3:70713703-70713722 Msa0660150:CDS 35.0%
AAAACCCGGTTCAATTTCAA+TGG - chr4_3:70713809-70713828 Msa0660150:CDS 35.0%
TGATCCATTGAAATTGAACC+GGG + chr4_3:70713816-70713835 None:intergenic 35.0%
AAGAAAGGGATGTTCGTATT+CGG - chr4_3:70713865-70713884 Msa0660150:intron 35.0%
!! TGCTACTAACAAAGGGTATT+TGG - chr4_3:70713908-70713927 Msa0660150:intron 35.0%
ATTATGCTCACATTGAAGCA+GGG - chr4_3:70713931-70713950 Msa0660150:intron 35.0%
ATTTGTGATGCTGATAGAGA+TGG - chr4_3:70714008-70714027 Msa0660150:intron 35.0%
TTTGTGATGCTGATAGAGAT+GGG - chr4_3:70714009-70714028 Msa0660150:intron 35.0%
GTATTCTTCCTGAAGAACTT+TGG - chr4_3:70714126-70714145 Msa0660150:intron 35.0%
GTGACATAATTAACAAGAGG+GGG + chr4_3:70714183-70714202 None:intergenic 35.0%
! GTTAGTATGTTGTTGGTTGT+TGG - chr4_3:70714531-70714550 Msa0660150:intron 35.0%
!!! CTTGTTACTTTTCCTTGAGT+GGG - chr4_3:70714554-70714573 Msa0660150:intron 35.0%
AATCTAAGTTTCTTCGAGCA+AGG + chr4_3:70714657-70714676 None:intergenic 35.0%
! CACAAAGGTTCCTTCTAAAA+TGG - chr4_3:70714736-70714755 Msa0660150:CDS 35.0%
TGGGAAAATATCTCATATGG+TGG - chr4_3:70714756-70714775 Msa0660150:CDS 35.0%
CATGAGTTTCTCATCTTATG+GGG + chr4_3:70714828-70714847 None:intergenic 35.0%
CTGGATCAATGCTTGAAAAT+CGG + chr4_3:70715063-70715082 None:intergenic 35.0%
GCTTATTTGTGTCAAAGATG+CGG + chr4_3:70715088-70715107 None:intergenic 35.0%
TCTGTAGTCATTCATAGCTT+TGG - chr4_3:70715197-70715216 Msa0660150:CDS 35.0%
! GTGAATGCATGTTTCTTTTG+AGG - chr4_3:70715228-70715247 Msa0660150:CDS 35.0%
CTATGAATTTGTATGGTGTG+TGG - chr4_3:70715300-70715319 Msa0660150:CDS 35.0%
GATTCGACTTCAATCTTTGA+TGG - chr4_3:70715344-70715363 Msa0660150:CDS 35.0%
TACTTGCTTACTTTATCGTG+TGG - chr4_3:70715392-70715411 Msa0660150:intron 35.0%
ACTTGCTTACTTTATCGTGT+GGG - chr4_3:70715393-70715412 Msa0660150:intron 35.0%
GAGAAAATGAAACAAGGGAA+TGG + chr4_3:70715490-70715509 None:intergenic 35.0%
CTTTGTTGAGCATGTTGATA+AGG - chr4_3:70715584-70715603 Msa0660150:intron 35.0%
! AGGAGCAGATATTTTATTGC+AGG - chr4_3:70715768-70715787 Msa0660150:intron 35.0%
! GGAGCAGATATTTTATTGCA+GGG - chr4_3:70715769-70715788 Msa0660150:intron 35.0%
! GAGCAGATATTTTATTGCAG+GGG - chr4_3:70715770-70715789 Msa0660150:intron 35.0%
! AGCAGATATTTTATTGCAGG+GGG - chr4_3:70715771-70715790 Msa0660150:intron 35.0%
CTTACAAATTCAGACTGGAA+AGG - chr4_3:70715851-70715870 Msa0660150:intron 35.0%
!! TAATGGGTTGAATGTTGTGA+AGG - chr4_3:70715938-70715957 Msa0660150:intron 35.0%
ATAGATAGCAATCTGTGCAA+TGG + chr4_3:70716090-70716109 None:intergenic 35.0%
ACAGATTGCTATCTATCCAT+TGG - chr4_3:70716094-70716113 Msa0660150:intron 35.0%
GAACCCTTACAAAGGATATA+TGG - chr4_3:70716177-70716196 Msa0660150:intron 35.0%
GGATCCATATATCCTTTGTA+AGG + chr4_3:70716184-70716203 None:intergenic 35.0%
AAAGGATATATGGATCCAAG+AGG - chr4_3:70716187-70716206 Msa0660150:intron 35.0%
AAGGATATATGGATCCAAGA+GGG - chr4_3:70716188-70716207 Msa0660150:intron 35.0%
! CTTTTCTTCTTCATAGAACC+TGG - chr4_3:70716446-70716465 Msa0660150:intron 35.0%
! CCACACTCATTATTTGCTTT+TGG + chr4_3:70716602-70716621 None:intergenic 35.0%
CCAAAAGCAAATAATGAGTG+TGG - chr4_3:70716599-70716618 Msa0660150:intron 35.0%
TAATGAGTGTGGGATGATAT+CGG - chr4_3:70716610-70716629 Msa0660150:intron 35.0%
!! ACATTTGACGGACTCAAATA+TGG + chr4_3:70716789-70716808 None:intergenic 35.0%
ATTTGAGTCCGTCAAATGTT+TGG - chr4_3:70716790-70716809 Msa0660150:CDS 35.0%
TTGTAGTGCCAAACATTTGA+CGG + chr4_3:70716801-70716820 None:intergenic 35.0%
!! GGCACTACAATTTGTTGATT+AGG - chr4_3:70716811-70716830 Msa0660150:CDS 35.0%
GAAGAAGGAAACACAAGAAA+TGG - chr4_3:70716855-70716874 Msa0660150:CDS 35.0%
TTTGTAACTTGGGACCAAAA+TGG - chr4_3:70716933-70716952 Msa0660150:CDS 35.0%
AACACTTCTAGTGCTTACAA+GGG - chr4_3:70717101-70717120 Msa0660150:CDS 35.0%
!!! AGGGAATGTCTGATGTTTTT+TGG - chr4_3:70717120-70717139 Msa0660150:CDS 35.0%
ATGTAAGTAATACTTGCAGC+CGG + chr4_3:70717215-70717234 None:intergenic 35.0%
GAGAGATTAACTAATCCTGT+AGG - chr4_3:70717352-70717371 Msa0660150:intron 35.0%
AAGTAGTGATTCTTCAAGGA+GGG - chr4_3:70717384-70717403 Msa0660150:intron 35.0%
AATATATACAGATTGGCGCA+TGG - chr4_3:70717577-70717596 Msa0660150:five_prime_UTR 35.0%
!! GTAATGGTGGATAGAATTGA+TGG - chr4_3:70717604-70717623 Msa0660150:five_prime_UTR 35.0%
TGCGTTCGTTATGTTTGATG+CGG + chr4_3:70713322-70713341 None:intergenic 40.0%
ACCACCTCTCTTCAAATTTC+AGG - chr4_3:70713393-70713412 Msa0660150:three_prime_UTR 40.0%
ACCTGAAATTTGAAGAGAGG+TGG + chr4_3:70713397-70713416 None:intergenic 40.0%
GGTACCTGAAATTTGAAGAG+AGG + chr4_3:70713400-70713419 None:intergenic 40.0%
GTGTTCGGGGTTTCAAAATT+TGG + chr4_3:70713685-70713704 None:intergenic 40.0%
! TGTGTTTTATGCTGTGTTCG+GGG + chr4_3:70713698-70713717 None:intergenic 40.0%
CACAGCATAAAACACATGTC+TGG - chr4_3:70713702-70713721 Msa0660150:CDS 40.0%
CAGCATAAAACACATGTCTG+GGG - chr4_3:70713704-70713723 Msa0660150:CDS 40.0%
!!! TTGAACCGGGTTTTTTACCA+CGG + chr4_3:70713803-70713822 None:intergenic 40.0%
GATTATGCTCACATTGAAGC+AGG - chr4_3:70713930-70713949 Msa0660150:intron 40.0%
ACATGTGTCCATGTCTATCA+CGG + chr4_3:70714326-70714345 None:intergenic 40.0%
!!! GCTTGTTACTTTTCCTTGAG+TGG - chr4_3:70714553-70714572 Msa0660150:intron 40.0%
AACATTTCTTGTCCCACTCA+AGG + chr4_3:70714569-70714588 None:intergenic 40.0%
ACTTGCATTGCCTATGATTG+TGG - chr4_3:70714616-70714635 Msa0660150:CDS 40.0%
!! TCATATGGTGGATTGATGCT+TGG - chr4_3:70714768-70714787 Msa0660150:CDS 40.0%
!! TGCCGGTTCAGTAAAAAACA+AGG - chr4_3:70714887-70714906 Msa0660150:CDS 40.0%
GACCATGAACTTCTACTTGA+AGG - chr4_3:70715007-70715026 Msa0660150:CDS 40.0%
CACCTTCAAGTAGAAGTTCA+TGG + chr4_3:70715012-70715031 None:intergenic 40.0%
CATGAACTTCTACTTGAAGG+TGG - chr4_3:70715010-70715029 Msa0660150:CDS 40.0%
TCGACTTCAATCTTTGATGG+TGG - chr4_3:70715347-70715366 Msa0660150:CDS 40.0%
TCGTGTGGGATAATATGTTC+AGG - chr4_3:70715407-70715426 Msa0660150:intron 40.0%
! TAAGGTGGTATTCCCTTTTG+TGG - chr4_3:70715455-70715474 Msa0660150:intron 40.0%
TGCAGGGATTGAAATTGATG+AGG - chr4_3:70715548-70715567 Msa0660150:intron 40.0%
CTTGTTCTCCAATGTCTACA+AGG + chr4_3:70715713-70715732 None:intergenic 40.0%
! GTGGTCTTACAAATTCAGAC+TGG - chr4_3:70715846-70715865 Msa0660150:intron 40.0%
CTTCATTACTGCTGGCATAA+TGG + chr4_3:70715880-70715899 None:intergenic 40.0%
TGCCAGCAGTAATGAAGATA+TGG - chr4_3:70715883-70715902 Msa0660150:intron 40.0%
TGCCATATCTTCATTACTGC+TGG + chr4_3:70715888-70715907 None:intergenic 40.0%
ATGAAGATATGGCAACGAGA+CGG - chr4_3:70715894-70715913 Msa0660150:intron 40.0%
! GGTTTATTAGGGTTTTTCCG+AGG - chr4_3:70715915-70715934 Msa0660150:intron 40.0%
! TTAGGGTTTTTCCGAGGTAA+TGG - chr4_3:70715921-70715940 Msa0660150:intron 40.0%
! TAGGGTTTTTCCGAGGTAAT+GGG - chr4_3:70715922-70715941 Msa0660150:intron 40.0%
CAACATTCAACCCATTACCT+CGG + chr4_3:70715935-70715954 None:intergenic 40.0%
CAAGGGAACAAGTCAGATAT+TGG - chr4_3:70716026-70716045 Msa0660150:intron 40.0%
AAGTCAGATATTGGTACTGC+CGG - chr4_3:70716035-70716054 Msa0660150:intron 40.0%
TTTGTAAGGGTTCCTAGGTT+CGG + chr4_3:70716170-70716189 None:intergenic 40.0%
TATCCTTTGTAAGGGTTCCT+AGG + chr4_3:70716175-70716194 None:intergenic 40.0%
TACCAAGAAGAGATGGAACA+AGG + chr4_3:70716235-70716254 None:intergenic 40.0%
GGAATCATACCAAGAAGAGA+TGG + chr4_3:70716242-70716261 None:intergenic 40.0%
CTTGGTATGATTCCTTATGC+AGG - chr4_3:70716248-70716267 Msa0660150:intron 40.0%
CTCTAGTACAACTTGGATGT+GGG - chr4_3:70716471-70716490 Msa0660150:intron 40.0%
CGTAAATTAAGGGACCAAAG+TGG + chr4_3:70716732-70716751 None:intergenic 40.0%
TCCTTCTTCTTCTTCTTGCT+GGG + chr4_3:70716844-70716863 None:intergenic 40.0%
TTCCTTCTTCTTCTTCTTGC+TGG + chr4_3:70716845-70716864 None:intergenic 40.0%
!! TGGATCCTTGAGTTGTTTTC+AGG + chr4_3:70716990-70717009 None:intergenic 40.0%
ATTACATTGCCATGCTTCTC+AGG - chr4_3:70717060-70717079 Msa0660150:CDS 40.0%
!! TAAGCACTAGAAGTGTTGGT+AGG + chr4_3:70717098-70717117 None:intergenic 40.0%
! CTTGTAAGCACTAGAAGTGT+TGG + chr4_3:70717102-70717121 None:intergenic 40.0%
CAACACTTCTAGTGCTTACA+AGG - chr4_3:70717100-70717119 Msa0660150:CDS 40.0%
AAATCTCCTCAAAGTTGTGC+CGG - chr4_3:70717193-70717212 Msa0660150:exon 40.0%
GGCTGCAAGTATTACTTACA+TGG - chr4_3:70717214-70717233 Msa0660150:five_prime_UTR 40.0%
CTACTTGTAATAGTGCCTAC+AGG + chr4_3:70717370-70717389 None:intergenic 40.0%
CAAGTAGTGATTCTTCAAGG+AGG - chr4_3:70717383-70717402 Msa0660150:intron 40.0%
! TGATGGACGACATTCTTATG+AGG - chr4_3:70717621-70717640 Msa0660150:five_prime_UTR 40.0%
! TTGAAGAGAGGTGGTGATGA+CGG + chr4_3:70713388-70713407 None:intergenic 45.0%
CTCCAAACCCAAATCATCTC+CGG - chr4_3:70713752-70713771 Msa0660150:CDS 45.0%
!!! TTTTTTACCACGGCCGTGAT+CGG + chr4_3:70713793-70713812 None:intergenic 45.0%
!! ATTGGCTTTGCGTGAGACTA+AGG - chr4_3:70713842-70713861 Msa0660150:intron 45.0%
TGCGTGAGACTAAGGAAGAA+AGG - chr4_3:70713850-70713869 Msa0660150:intron 45.0%
GCGTGAGACTAAGGAAGAAA+GGG - chr4_3:70713851-70713870 Msa0660150:intron 45.0%
! AGAGCATCCCAAAGTTCTTC+AGG + chr4_3:70714137-70714156 None:intergenic 45.0%
!! ACTTTGGGATGCTCTTGTCA+AGG - chr4_3:70714142-70714161 Msa0660150:intron 45.0%
GACCTATGAAGCTCATACAC+CGG - chr4_3:70714231-70714250 Msa0660150:intron 45.0%
! CTTCTGATTGAAGGCGTGTT+TGG + chr4_3:70714355-70714374 None:intergenic 45.0%
! CATTAATATTGGTTGGGGGG+TGG - chr4_3:70714462-70714481 Msa0660150:intron 45.0%
GTTACAGCAGCCACAATCAT+AGG + chr4_3:70714629-70714648 None:intergenic 45.0%
GTTTCTCATCTTATGGGGAG+AGG + chr4_3:70714823-70714842 None:intergenic 45.0%
AAGTCACTGCCTCTTCTGTA+CGG - chr4_3:70714985-70715004 Msa0660150:CDS 45.0%
! TTGAAGGTGGTGACGTTGAT+CGG - chr4_3:70715023-70715042 Msa0660150:CDS 45.0%
CAAATGTTGAGAGACTGCAG+AGG - chr4_3:70715173-70715192 Msa0660150:CDS 45.0%
!! TTTTCAAGGGTTGCTTCGTG+AGG + chr4_3:70715663-70715682 None:intergenic 45.0%
AGGGTATGCCTTGTAGACAT+TGG - chr4_3:70715702-70715721 Msa0660150:intron 45.0%
GAACAAGCTGTCATTCCTGA+AGG - chr4_3:70715726-70715745 Msa0660150:intron 45.0%
TTTATTGCAGGGGGAATAGC+AGG - chr4_3:70715780-70715799 Msa0660150:intron 45.0%
TGCTCCTCTTGATCGTCTAA+AGG - chr4_3:70715824-70715843 Msa0660150:intron 45.0%
TCCTCTTGATCGTCTAAAGG+TGG - chr4_3:70715827-70715846 Msa0660150:intron 45.0%
ACCACCTTTAGACGATCAAG+AGG + chr4_3:70715831-70715850 None:intergenic 45.0%
TGGCAACGAGACGGTTTATT+AGG - chr4_3:70715903-70715922 Msa0660150:intron 45.0%
GGCAACGAGACGGTTTATTA+GGG - chr4_3:70715904-70715923 Msa0660150:intron 45.0%
!! TAAAACTTGATGGCGCTCTC+AGG + chr4_3:70715969-70715988 None:intergenic 45.0%
! AAGACTTTTTGCAGGTGGCA+TGG - chr4_3:70716058-70716077 Msa0660150:intron 45.0%
TTACAGACATGTGCGTCTGA+AGG - chr4_3:70716134-70716153 Msa0660150:intron 45.0%
GAACCTAGGAACCCTTACAA+AGG - chr4_3:70716169-70716188 Msa0660150:intron 45.0%
GTGAGATCAATGCCTGCATA+AGG + chr4_3:70716263-70716282 None:intergenic 45.0%
CCACATCCAAGTTGTACTAG+AGG + chr4_3:70716473-70716492 None:intergenic 45.0%
CCTCTAGTACAACTTGGATG+TGG - chr4_3:70716470-70716489 Msa0660150:intron 45.0%
ACTTGGATGTGGGACAGTTT+CGG - chr4_3:70716481-70716500 Msa0660150:intron 45.0%
TACTTGTGTCTATCCACTGC+AGG - chr4_3:70716517-70716536 Msa0660150:intron 45.0%
CTTGTACGAATAACCTGCAG+TGG + chr4_3:70716533-70716552 None:intergenic 45.0%
CACTGCAGGTTATTCGTACA+AGG - chr4_3:70716531-70716550 Msa0660150:intron 45.0%
ACCCAGCAAGAAGAAGAAGA+AGG - chr4_3:70716840-70716859 Msa0660150:CDS 45.0%
TGGAAAACCCTTAAGGACGA+AGG - chr4_3:70717140-70717159 Msa0660150:CDS 45.0%
TCGAAAGCCTTCGTCCTTAA+GGG + chr4_3:70717150-70717169 None:intergenic 45.0%
TTAAGGACGAAGGCTTTCGA+GGG - chr4_3:70717150-70717169 Msa0660150:CDS 45.0%
! GGCACAACTTTGAGGAGATT+TGG + chr4_3:70717194-70717213 None:intergenic 45.0%
!! ATTGGCGCATGGCTTTGTAA+TGG - chr4_3:70717588-70717607 Msa0660150:five_prime_UTR 45.0%
GAAGTCGCCGGAGATGATTT+GGG + chr4_3:70713762-70713781 None:intergenic 50.0%
AGAAGTCGCCGGAGATGATT+TGG + chr4_3:70713763-70713782 None:intergenic 50.0%
GTCCGGTGTATGAGCTTCAT+AGG + chr4_3:70714236-70714255 None:intergenic 50.0%
GTCACTGTCCGTGATAGACA+TGG - chr4_3:70714315-70714334 Msa0660150:intron 50.0%
! GCGCTGACACTTCTGATTGA+AGG + chr4_3:70714364-70714383 None:intergenic 50.0%
AACAGTGATCCAATCGGTGC+CGG - chr4_3:70714870-70714889 Msa0660150:CDS 50.0%
!! TTTACTGAACCGGCACCGAT+TGG + chr4_3:70714882-70714901 None:intergenic 50.0%
GTTCATGGTCCGTACAGAAG+AGG + chr4_3:70714997-70715016 None:intergenic 50.0%
CTAGAAATGCGCTGCTTGAG+AGG - chr4_3:70715107-70715126 Msa0660150:CDS 50.0%
! TGCAGCATCAAAGCTGGCTT+TGG + chr4_3:70715532-70715551 None:intergenic 50.0%
! AAAGCCAGCTTTGATGCTGC+AGG - chr4_3:70715531-70715550 Msa0660150:intron 50.0%
! AAGCCAGCTTTGATGCTGCA+GGG - chr4_3:70715532-70715551 Msa0660150:intron 50.0%
AATCCCTGCAGCATCAAAGC+TGG + chr4_3:70715538-70715557 None:intergenic 50.0%
! ACATGCTTGCTGATGCCTTC+AGG + chr4_3:70715744-70715763 None:intergenic 50.0%
! ACTGCCGGAAGACTTTTTGC+AGG - chr4_3:70716050-70716069 Msa0660150:intron 50.0%
GCCACCTGCAAAAAGTCTTC+CGG + chr4_3:70716057-70716076 None:intergenic 50.0%
ATGTGCGTCTGAAGGTGGAA+AGG - chr4_3:70716142-70716161 Msa0660150:intron 50.0%
AAGGCCTCTATAGAAAGCCC+GGG + chr4_3:70716216-70716235 None:intergenic 50.0%
CAAGGCCTCTATAGAAAGCC+CGG + chr4_3:70716217-70716236 None:intergenic 50.0%
!! GGCCTTGTTCCATCTCTTCT+TGG - chr4_3:70716230-70716249 Msa0660150:intron 50.0%
CCAAGTTGTACTAGAGGACC+AGG + chr4_3:70716467-70716486 None:intergenic 50.0%
CCTGGTCCTCTAGTACAACT+TGG - chr4_3:70716464-70716483 Msa0660150:intron 50.0%
CTTGGATGTGGGACAGTTTC+GGG - chr4_3:70716482-70716501 Msa0660150:intron 50.0%
!! ACATTTTGGTCCTTCCTGCC+TGG - chr4_3:70716760-70716779 Msa0660150:CDS 50.0%
AATATGGAGACCAGGCAGGA+AGG + chr4_3:70716773-70716792 None:intergenic 50.0%
CTCAAATATGGAGACCAGGC+AGG + chr4_3:70716777-70716796 None:intergenic 50.0%
CGGACTCAAATATGGAGACC+AGG + chr4_3:70716781-70716800 None:intergenic 50.0%
CTTCTTCTTCTTGCTGGGTG+AGG + chr4_3:70716839-70716858 None:intergenic 50.0%
CTCGAAAGCCTTCGTCCTTA+AGG + chr4_3:70717151-70717170 None:intergenic 50.0%
CTTAAGGACGAAGGCTTTCG+AGG - chr4_3:70717149-70717168 Msa0660150:CDS 50.0%
AGGCTTTCGAGGGTTCTACA+AGG - chr4_3:70717160-70717179 Msa0660150:CDS 50.0%
GGCTTTCGAGGGTTCTACAA+GGG - chr4_3:70717161-70717180 Msa0660150:CDS 50.0%
! CATGTCTGGGGCCATAGACA+TGG - chr4_3:70713716-70713735 Msa0660150:CDS 55.0%
GCCATAGACATGGACCACGT+GGG - chr4_3:70713726-70713745 Msa0660150:CDS 55.0%
ACCCACGTGGTCCATGTCTA+TGG + chr4_3:70713730-70713749 None:intergenic 55.0%
TGGGTTTGGAGAAACCCACG+TGG + chr4_3:70713743-70713762 None:intergenic 55.0%
! CGCCGGAGATGATTTGGGTT+TGG + chr4_3:70713757-70713776 None:intergenic 55.0%
ACTTCTCCGACCACCGATCA+CGG - chr4_3:70713777-70713796 Msa0660150:CDS 55.0%
CACGGCCGTGGTAAAAAACC+CGG - chr4_3:70713795-70713814 Msa0660150:CDS 55.0%
TGGGATGCTCTTGTCAAGGC+TGG - chr4_3:70714146-70714165 Msa0660150:intron 55.0%
TTGTGTCAAAGATGCGGCGC+TGG + chr4_3:70715082-70715101 None:intergenic 55.0%
TTTGTATGGTGTGTGGGCCG+TGG - chr4_3:70715307-70715326 Msa0660150:CDS 55.0%
TTGTATGGTGTGTGGGCCGT+GGG - chr4_3:70715308-70715327 Msa0660150:CDS 55.0%
ATCGGCCTTCACAAGTCCCA+CGG + chr4_3:70715327-70715346 None:intergenic 55.0%
GCATCAGCAAGCATGTGCAC+AGG - chr4_3:70715748-70715767 Msa0660150:intron 55.0%
! GCCGGAAGACTTTTTGCAGG+TGG - chr4_3:70716053-70716072 Msa0660150:intron 55.0%
! CTTTTTGCAGGTGGCATGGC+TGG - chr4_3:70716062-70716081 Msa0660150:intron 55.0%
CAGACATGTGCGTCTGAAGG+TGG - chr4_3:70716137-70716156 Msa0660150:intron 55.0%
TATGGATCCAAGAGGGACCC+CGG - chr4_3:70716195-70716214 Msa0660150:intron 55.0%
AGGCCTCTATAGAAAGCCCG+GGG + chr4_3:70716215-70716234 None:intergenic 55.0%
TTGCAGCCGGCACAACTTTG+AGG + chr4_3:70717202-70717221 None:intergenic 55.0%
!! GGCGCATGGCTTTGTAATGG+TGG - chr4_3:70717591-70717610 Msa0660150:five_prime_UTR 55.0%
GGCCATAGACATGGACCACG+TGG - chr4_3:70713725-70713744 Msa0660150:CDS 60.0%
TTTACCACGGCCGTGATCGG+TGG + chr4_3:70713790-70713809 None:intergenic 60.0%
CGGTGTGTCAGTGTCGTGTC+CGG + chr4_3:70714253-70714272 None:intergenic 60.0%
CGGACACGACACTGACACAC+CGG - chr4_3:70714251-70714270 Msa0660150:intron 60.0%
GGTGGAAAGGCTCCGAACCT+AGG - chr4_3:70716155-70716174 Msa0660150:intron 60.0%
ATGGATCCAAGAGGGACCCC+GGG - chr4_3:70716196-70716215 Msa0660150:intron 60.0%
GGACCCCGGGCTTTCTATAG+AGG - chr4_3:70716209-70716228 Msa0660150:intron 60.0%
GGGACAGTTTCGGGAGCTCT+TGG - chr4_3:70716491-70716510 Msa0660150:intron 60.0%
TGCCATGCTTCTCAGGCTGC+AGG - chr4_3:70717067-70717086 Msa0660150:CDS 60.0%
TCGGTGGTCGGAGAAGTCGC+CGG + chr4_3:70713774-70713793 None:intergenic 65.0%
GTGGGCCGTGGGACTTGTGA+AGG - chr4_3:70715319-70715338 Msa0660150:CDS 65.0%
AGAAAGCCCGGGGTCCCTCT+TGG + chr4_3:70716205-70716224 None:intergenic 65.0%
CGCCTGCAGCCTGAGAAGCA+TGG + chr4_3:70717072-70717091 None:intergenic 65.0%
CCACGGCCGTGATCGGTGGT+CGG + chr4_3:70713786-70713805 None:intergenic 70.0%
CCGACCACCGATCACGGCCG+TGG - chr4_3:70713783-70713802 Msa0660150:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 70713275 70717650 70713275 ID=Msa0660150;Name=Msa0660150
chr4_3 mRNA 70713275 70717650 70713275 ID=Msa0660150-mRNA-1;Parent=Msa0660150;Name=Msa0660150-mRNA-1;_AED=0.05;_eAED=0.05;_QI=230|0.75|0.8|1|0.75|0.6|5|376|517
chr4_3 exon 70713275 70713843 70713275 ID=Msa0660150-mRNA-1:exon:21094;Parent=Msa0660150-mRNA-1
chr4_3 exon 70714373 70714463 70714373 ID=Msa0660150-mRNA-1:exon:21093;Parent=Msa0660150-mRNA-1
chr4_3 exon 70714590 70715408 70714590 ID=Msa0660150-mRNA-1:exon:21092;Parent=Msa0660150-mRNA-1
chr4_3 exon 70716758 70717298 70716758 ID=Msa0660150-mRNA-1:exon:21091;Parent=Msa0660150-mRNA-1
chr4_3 exon 70717511 70717650 70717511 ID=Msa0660150-mRNA-1:exon:21090;Parent=Msa0660150-mRNA-1
chr4_3 five_prime_UTR 70717511 70717650 70717511 ID=Msa0660150-mRNA-1:five_prime_utr;Parent=Msa0660150-mRNA-1
chr4_3 five_prime_UTR 70717209 70717298 70717209 ID=Msa0660150-mRNA-1:five_prime_utr;Parent=Msa0660150-mRNA-1
chr4_3 CDS 70716758 70717208 70716758 ID=Msa0660150-mRNA-1:cds;Parent=Msa0660150-mRNA-1
chr4_3 CDS 70714590 70715408 70714590 ID=Msa0660150-mRNA-1:cds;Parent=Msa0660150-mRNA-1
chr4_3 CDS 70714373 70714463 70714373 ID=Msa0660150-mRNA-1:cds;Parent=Msa0660150-mRNA-1
chr4_3 CDS 70713651 70713843 70713651 ID=Msa0660150-mRNA-1:cds;Parent=Msa0660150-mRNA-1
chr4_3 three_prime_UTR 70713275 70713650 70713275 ID=Msa0660150-mRNA-1:three_prime_utr;Parent=Msa0660150-mRNA-1
Gene Sequence

>Msa0660150

ATGTCTGGGGCCATAGACATGGACCACGTGGGTTTCTCCAAACCCAAATCATCTCCGGCGACTTCTCCGACCACCGATCACGGCCGTGGTAAAAAACCCGGTTCAATTTCAATGGATCATGTTCTATTGGCTTTGCGTGAGACTAAGGAAGAAAGGGATGTTCGTATTCGGAGTTTATTCAATTTCTTTGATGCTACTAACAAAGGGTATTTGGATTATGCTCACATTGAAGCAGGGTTATCTGCACTTCAGATTCCACCTGAATATAAATATGCTAAGGAGCTTTTTAAGATTTGTGATGCTGATAGAGATGGGAGAATTGATTATCATGATTTTAGACGGTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGAACATAATGGTTGTATTCTTCCTGAAGAACTTTGGGATGCTCTTGTCAAGGCTGTATTTATCATAACCAAAGCCAGCTTTGATGCTGCAGGGATTGAAATTGATGAGGTTGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTTCTTTATCCTCACGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGGTATGCCTTGTAGACATTGGAGAACAAGCTGTCATTCCTGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGAATAGCAGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCATCCATTATGCCAGCAGTAATGAAGATATGGCAACGAGACGGTTTATTAGGGTTTTTCCGAGGTAATGGGTTGAATGTTGTGAAGGTTGCACCTGAGAGCGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGTCAAGGGAACAAGTCAGATATTGGTACTGCCGGAAGACTTTTTGCAGGTGGCATGGCTGGTGCCATTGCACAGATTGCTATCTATCCATTGGATCTTATCAAAACTAGGTTACAGACATGTGCGTCTGAAGGTGGAAAGGCTCCGAACCTAGGAACCCTTACAAAGGATATATGGATCCAAGAGGGACCCCGGGCTTTCTATAGAGGCCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATATCCAAGAAATATATTATATCTGACCATGAACCTGGTCCTCTAGTACAACTTGGATGTGGGACAGTTTCGGGAGCTCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACAAGGCTGCAGGCGCAACCTACCAACACTTCTAGTGCTTACAAGGGAATGTCTGATGTTTTTTGGAAAACCCTTAAGGACGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCAAATCTCCTCAAAGTTGTGCCGGCTGCAAGTATTACTTACATGGTTTATGAAAATATGAAGAAGAATTTAGATCTTGATTAG

Protein sequence

>Msa0660150

MSGAIDMDHVGFSKPKSSPATSPTTDHGRGKKPGSISMDHVLLALRETKEERDVRIRSLFNFFDATNKGYLDYAHIEAGLSALQIPPEYKYAKELFKICDADRDGRIDYHDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAVFIITKASFDAAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDSQGNKSDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGKAPNLGTLTKDIWIQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDISKKYIISDHEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSSAYKGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKNLDLD*