Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317770 | XP_003594311.2 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 3.55e-165 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317770 | sp|Q9FWW5|Y1215_ARATH | 49.160 | 238 | 111 | 4 | 11 | 243 | 8 | 240 | 2.23e-59 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197850 | Msa0317770 | 0.863104 | 3.159025e-64 | -8.615850e-47 |
| Msa0239510 | Msa0317770 | 0.936600 | 1.340111e-97 | -8.615850e-47 |
| Msa0317390 | Msa0317770 | 0.873167 | 1.813483e-67 | -8.615850e-47 |
| Msa0317770 | Msa0334350 | 0.805289 | 1.434513e-49 | -8.615850e-47 |
| Msa0317770 | Msa0547400 | 0.800435 | 1.443019e-48 | -8.615850e-47 |
| Msa0317770 | Msa0908170 | 0.802634 | 5.112570e-49 | -8.615850e-47 |
| Msa0317770 | Msa0959010 | 0.802177 | 6.348335e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317770 | MtrunA17_Chr2g0290651 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 3.26e-169 | 479 |
| Msa0317770 | MtrunA17_Chr4g0076431 | 71.818 | 220 | 60 | 2 | 11 | 229 | 2 | 220 | 2.34e-97 | 295 |
| Msa0317770 | MtrunA17_Chr3g0102681 | 43.882 | 237 | 125 | 5 | 9 | 242 | 12 | 243 | 6.52e-49 | 170 |
| Msa0317770 | MtrunA17_Chr3g0078801 | 41.250 | 240 | 131 | 5 | 9 | 241 | 12 | 248 | 2.75e-39 | 144 |
| Msa0317770 | MtrunA17_Chr5g0446731 | 39.583 | 240 | 135 | 5 | 9 | 241 | 12 | 248 | 3.08e-36 | 135 |
| Msa0317770 | MtrunA17_Chr3g0133891 | 30.645 | 248 | 164 | 4 | 1 | 247 | 270 | 510 | 3.70e-18 | 83.6 |
| Msa0317770 | MtrunA17_Chr1g0153431 | 29.461 | 241 | 157 | 4 | 14 | 247 | 259 | 493 | 1.84e-16 | 78.6 |
| Msa0317770 | MtrunA17_Chr5g0395261 | 34.545 | 165 | 95 | 2 | 61 | 218 | 113 | 271 | 1.34e-11 | 64.3 |
| Msa0317770 | MtrunA17_Chr4g0039981 | 32.704 | 159 | 106 | 1 | 61 | 218 | 87 | 245 | 2.03e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317770 | AT1G12150.2 | 49.160 | 238 | 111 | 4 | 11 | 243 | 8 | 240 | 2.27e-60 | 199 |
| Msa0317770 | AT1G12150.1 | 49.160 | 238 | 111 | 4 | 11 | 243 | 8 | 240 | 2.27e-60 | 199 |
| Msa0317770 | AT5G55860.1 | 43.333 | 240 | 126 | 4 | 6 | 242 | 8 | 240 | 1.06e-38 | 142 |
| Msa0317770 | AT4G17210.1 | 33.929 | 224 | 125 | 4 | 10 | 223 | 12 | 222 | 6.94e-25 | 103 |
| Msa0317770 | AT2G26570.1 | 29.508 | 244 | 159 | 6 | 9 | 251 | 154 | 385 | 5.82e-17 | 80.5 |
| Msa0317770 | AT2G26570.2 | 29.508 | 244 | 159 | 6 | 9 | 251 | 154 | 385 | 5.82e-17 | 80.5 |
| Msa0317770 | AT4G33390.1 | 30.522 | 249 | 158 | 6 | 8 | 251 | 138 | 376 | 7.97e-16 | 77.0 |
Find 47 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTCTTGATGCTTTCA+TGG | 0.211121 | 2_4:-15720361 | None:intergenic |
| TCTTGTAGCATCAAACATTA+AGG | 0.277691 | 2_4:+15718968 | Msa0317770:five_prime_UTR |
| CAATTCTTGAAGTGTTATAT+TGG | 0.291401 | 2_4:-15720007 | None:intergenic |
| CAATCTGTCAAGGCTGCTAT+TGG | 0.319700 | 2_4:+15719209 | Msa0317770:CDS |
| TGCCGCTTTGGAGGCGAAAT+TGG | 0.336907 | 2_4:+15720254 | Msa0317770:CDS |
| TTGGAGAACTATCTCTGTTT+CGG | 0.342248 | 2_4:-15719133 | None:intergenic |
| TTGGTGAAGTTCGTGTCAAC+CGG | 0.365739 | 2_4:+15719237 | Msa0317770:CDS |
| AAGGCTGCTATTGGTTTGTT+TGG | 0.369565 | 2_4:+15719218 | Msa0317770:CDS |
| ACCGGAGAATCTGTCTCCTT+TGG | 0.398317 | 2_4:-15719152 | None:intergenic |
| CAAAGAAAATTCTCATCAAA+AGG | 0.404835 | 2_4:+15718941 | Msa0317770:five_prime_UTR |
| GAAACACCTTAAAATATTGT+TGG | 0.429210 | 2_4:-15718825 | None:intergenic |
| AGGAACCAAAGTTTACATCT+TGG | 0.434259 | 2_4:+15718895 | Msa0317770:five_prime_UTR |
| AAGAACCAAGATGTAAACTT+TGG | 0.460675 | 2_4:-15718900 | None:intergenic |
| TGATAGAATTATTTCTATCC+CGG | 0.469818 | 2_4:-15719256 | None:intergenic |
| GTGTGATATGCAGAATGTAT+TGG | 0.475004 | 2_4:+15719876 | Msa0317770:intron |
| AAAGGAGACTCAGCTTCTCT+TGG | 0.484746 | 2_4:+15719900 | Msa0317770:CDS |
| TATGCAGAATGTATTGGAAA+AGG | 0.485982 | 2_4:+15719882 | Msa0317770:intron |
| GGCAGGAGAAGCTCAGCGTT+CGG | 0.487792 | 2_4:+15720290 | Msa0317770:CDS |
| AAGCGATAGGGTATGAAGCT+TGG | 0.500293 | 2_4:+15720133 | Msa0317770:CDS |
| AGAACTAGAACATGCAAGAA+AGG | 0.501099 | 2_4:+15720161 | Msa0317770:CDS |
| AGATTCTCCGGTGGGAGAGA+GGG | 0.502913 | 2_4:+15719163 | Msa0317770:CDS |
| AGCGCTTATCGAGCTTGATA+AGG | 0.503328 | 2_4:+15719984 | Msa0317770:CDS |
| GGGCTATAAACAAGCATGGT+TGG | 0.508552 | 2_4:+15723410 | Msa0317770:intron |
| TTGGCTGCATTTCAGATGGC+AGG | 0.508839 | 2_4:+15720273 | Msa0317770:CDS |
| TCCAAAGGAGACAGATTCTC+CGG | 0.522645 | 2_4:+15719151 | Msa0317770:CDS |
| CAGATTCTCCGGTGGGAGAG+AGG | 0.533950 | 2_4:+15719162 | Msa0317770:CDS |
| AAAGATCAATGAACTTTCAA+AGG | 0.534366 | 2_4:+15720329 | Msa0317770:CDS |
| AGAAGAACAGATTAAAGCGA+TGG | 0.537448 | 2_4:+15720410 | Msa0317770:CDS |
| TCAAGCCAAAGAACTCGAAA+AGG | 0.537588 | 2_4:+15720098 | Msa0317770:CDS |
| GCAGCCTTGACAGATTGAAA+TGG | 0.548681 | 2_4:-15719203 | None:intergenic |
| GCGCTATCACAGAAAGCGAT+AGG | 0.554886 | 2_4:+15720120 | Msa0317770:CDS |
| CGCTATCACAGAAAGCGATA+GGG | 0.555926 | 2_4:+15720121 | Msa0317770:CDS |
| GAAATTGGCTGCATTTCAGA+TGG | 0.565691 | 2_4:+15720269 | Msa0317770:CDS |
| TCAATCTCCCTCTCTCCCAC+CGG | 0.566121 | 2_4:-15719170 | None:intergenic |
| AGAATCAAAGCAATCTGCAA+TGG | 0.566703 | 2_4:+15720053 | Msa0317770:CDS |
| GAAGAACAGATTAAAGCGAT+GGG | 0.567926 | 2_4:+15720411 | Msa0317770:CDS |
| TGGTGAAGTTCGTGTCAACC+GGG | 0.573487 | 2_4:+15719238 | Msa0317770:CDS |
| ATCTGCAATGGAAGAAAGTG+AGG | 0.605339 | 2_4:+15720065 | Msa0317770:CDS |
| AAATAAAAGTTAGACTTGCA+AGG | 0.613854 | 2_4:+15718875 | Msa0317770:five_prime_UTR |
| AGCACCATTTCAATCTGTCA+AGG | 0.619152 | 2_4:+15719199 | Msa0317770:CDS |
| GCGTTCGGCGAAATTGAACT+CGG | 0.630622 | 2_4:+15720305 | Msa0317770:CDS |
| AAGGAGACAGATTCTCCGGT+GGG | 0.630732 | 2_4:+15719155 | Msa0317770:CDS |
| TATCAAGAGAAGATCTTCAG+AGG | 0.632667 | 2_4:+15719274 | Msa0317770:CDS |
| AAACAGAGATAGTTCTCCAA+AGG | 0.633433 | 2_4:+15719136 | Msa0317770:CDS |
| TGTAGGGCTATAAACAAGCA+TGG | 0.643559 | 2_4:+15723406 | Msa0317770:intron |
| AGCCAATTTCGCCTCCAAAG+CGG | 0.663081 | 2_4:-15720256 | None:intergenic |
| AAAGGAGACAGATTCTCCGG+TGG | 0.663875 | 2_4:+15719154 | Msa0317770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGATTATATACTATTTTT+AGG | - | chr2_4:15718779-15718798 | None:intergenic | 10.0% |
| !! | TTATAAAATATTATGTAACA+CGG | + | chr2_4:15719033-15719052 | Msa0317770:intron | 10.0% |
| !! | TAACAAAAAATTTCTATATA+AGG | - | chr2_4:15721943-15721962 | None:intergenic | 10.0% |
| !!! | TCTATTTTATTTTAAAGTTT+AGG | + | chr2_4:15722565-15722584 | Msa0317770:intron | 10.0% |
| !!! | CTATTTTATTTTAAAGTTTA+GGG | + | chr2_4:15722566-15722585 | Msa0317770:intron | 10.0% |
| !!! | TTTAGAAAAGATAATTTTAT+AGG | - | chr2_4:15722917-15722936 | None:intergenic | 10.0% |
| !! | TTAAATTGTTTAATTACTTA+GGG | + | chr2_4:15723150-15723169 | Msa0317770:intron | 10.0% |
| !!! | ATTTAACCAACAATATTTTA+AGG | + | chr2_4:15718819-15718838 | Msa0317770:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTTTTTTTTGTACC+AGG | + | chr2_4:15719352-15719371 | Msa0317770:intron | 15.0% |
| !! | AAAAAATTTCTATATAAGGA+GGG | - | chr2_4:15721939-15721958 | None:intergenic | 15.0% |
| !!! | GAAAATTGATAGTATATTTA+AGG | - | chr2_4:15722009-15722028 | None:intergenic | 15.0% |
| !!! | TTTAAAATAAAATAGAAGTG+TGG | - | chr2_4:15722561-15722580 | None:intergenic | 15.0% |
| !! | TTAAATTTGGATTCAAATTT+AGG | - | chr2_4:15722731-15722750 | None:intergenic | 15.0% |
| !! | TTTAGATTAGTATTTAAATC+AGG | + | chr2_4:15722779-15722798 | Msa0317770:intron | 15.0% |
| !! | AGTAATTAAACAATTTAACA+TGG | - | chr2_4:15723148-15723167 | None:intergenic | 15.0% |
| !! | GTTAAATTGTTTAATTACTT+AGG | + | chr2_4:15723149-15723168 | Msa0317770:intron | 15.0% |
| !! | ATTTGTAATATTAAGGATTG+CGG | - | chr2_4:15719391-15719410 | None:intergenic | 20.0% |
| !! | CATGGTTATTTGTAATATTA+AGG | - | chr2_4:15719398-15719417 | None:intergenic | 20.0% |
| !! | CTTAATATTACAAATAACCA+TGG | + | chr2_4:15719396-15719415 | Msa0317770:intron | 20.0% |
| !!! | AAACTTTTACAAAACTTCAA+AGG | + | chr2_4:15720452-15720471 | Msa0317770:intron | 20.0% |
| !! | ATCTATTAATCTTCATTCTT+TGG | - | chr2_4:15720906-15720925 | None:intergenic | 20.0% |
| !!! | ATTTCTGTTTTAGATGAAAA+GGG | - | chr2_4:15720977-15720996 | None:intergenic | 20.0% |
| !!! | TATTTCTGTTTTAGATGAAA+AGG | - | chr2_4:15720978-15720997 | None:intergenic | 20.0% |
| !!! | AATGTTGACTTTGATTAATT+AGG | - | chr2_4:15721841-15721860 | None:intergenic | 20.0% |
| !! | CAAAAAATTTCTATATAAGG+AGG | - | chr2_4:15721940-15721959 | None:intergenic | 20.0% |
| !!! | ATTGATAGTATATTTAAGGA+GGG | - | chr2_4:15722005-15722024 | None:intergenic | 20.0% |
| !!! | AATTGATAGTATATTTAAGG+AGG | - | chr2_4:15722006-15722025 | None:intergenic | 20.0% |
| !! | TCACATTAATTGTTTATAAG+TGG | - | chr2_4:15722220-15722239 | None:intergenic | 20.0% |
| !! | CAAAAAAAATAAGTGTTTGA+CGG | + | chr2_4:15722308-15722327 | Msa0317770:intron | 20.0% |
| !! | CAAAACACGTATTATAATAT+GGG | - | chr2_4:15722537-15722556 | None:intergenic | 20.0% |
| !! | TACTTGTGTATGTTTAAATT+TGG | - | chr2_4:15722744-15722763 | None:intergenic | 20.0% |
| !! | TTATTATTGTAAAGTTGAGT+TGG | + | chr2_4:15723181-15723200 | Msa0317770:intron | 20.0% |
| !!! | ACTATTTTTAGGTTGAGAAA+TGG | - | chr2_4:15718768-15718787 | None:intergenic | 25.0% |
| ! | GAAACACCTTAAAATATTGT+TGG | - | chr2_4:15718828-15718847 | None:intergenic | 25.0% |
| ! | AAATAAAAGTTAGACTTGCA+AGG | + | chr2_4:15718875-15718894 | Msa0317770:five_prime_UTR | 25.0% |
| !! | TGATGAGAATTTTCTTTGAA+AGG | - | chr2_4:15718939-15718958 | None:intergenic | 25.0% |
| ! | CAAAGAAAATTCTCATCAAA+AGG | + | chr2_4:15718941-15718960 | Msa0317770:five_prime_UTR | 25.0% |
| ! | ATTGCATAACATGTTACATA+TGG | - | chr2_4:15719014-15719033 | None:intergenic | 25.0% |
| !!! | TGATAGAATTATTTCTATCC+CGG | - | chr2_4:15719259-15719278 | None:intergenic | 25.0% |
| ! | ATTTGCAATATTAAGGATAG+CGG | - | chr2_4:15719312-15719331 | None:intergenic | 25.0% |
| ! | AGCGATTATTTGCAATATTA+AGG | - | chr2_4:15719319-15719338 | None:intergenic | 25.0% |
| ! | TTAATATTGCAAATAATCGC+TGG | + | chr2_4:15719318-15719337 | Msa0317770:intron | 25.0% |
| ! | TTATTCGCAAAATTTAACCA+TGG | - | chr2_4:15719416-15719435 | None:intergenic | 25.0% |
| !! | AATAGCAGTTTGTTCAAATT+CGG | + | chr2_4:15719636-15719655 | Msa0317770:intron | 25.0% |
| !!! | AATGCCAATTTTAATACAAG+AGG | + | chr2_4:15719737-15719756 | Msa0317770:intron | 25.0% |
| !! | CAATTCTTGAAGTGTTATAT+TGG | - | chr2_4:15720010-15720029 | None:intergenic | 25.0% |
| !! | TATTTTGTTAAGTTCTTGCT+TGG | - | chr2_4:15720220-15720239 | None:intergenic | 25.0% |
| ! | AAAGATCAATGAACTTTCAA+AGG | + | chr2_4:15720329-15720348 | Msa0317770:CDS | 25.0% |
| ! | AAATTACTAAACATTCTCGA+TGG | - | chr2_4:15720607-15720626 | None:intergenic | 25.0% |
| !!! | GAAATGATTAGAAAAGTGTT+TGG | + | chr2_4:15720700-15720719 | Msa0317770:intron | 25.0% |
| !! | CATCATACCATGAAAAATTT+TGG | + | chr2_4:15720812-15720831 | Msa0317770:intron | 25.0% |
| !! | GCAAATTCCAAAATTTTTCA+TGG | - | chr2_4:15720822-15720841 | None:intergenic | 25.0% |
| ! | ATTATTGAAATCAAGTCTGA+AGG | - | chr2_4:15721059-15721078 | None:intergenic | 25.0% |
| !!! | ACTTGATGATGAAACAAATT+GGG | - | chr2_4:15721209-15721228 | None:intergenic | 25.0% |
| !!! | TACTTGATGATGAAACAAAT+TGG | - | chr2_4:15721210-15721229 | None:intergenic | 25.0% |
| ! | TCATCATCAAGTAACATTAT+CGG | + | chr2_4:15721217-15721236 | Msa0317770:intron | 25.0% |
| ! | AATATCAACTTCTTACGTAT+AGG | + | chr2_4:15721966-15721985 | Msa0317770:intron | 25.0% |
| ! | ATTAAGATGTTGAATTTGAG+TGG | + | chr2_4:15722371-15722390 | Msa0317770:intron | 25.0% |
| ! | CCAAAACACGTATTATAATA+TGG | - | chr2_4:15722538-15722557 | None:intergenic | 25.0% |
| !! | CCATATTATAATACGTGTTT+TGG | + | chr2_4:15722535-15722554 | Msa0317770:intron | 25.0% |
| ! | ATAATCAAAGGGAAGAAATT+GGG | - | chr2_4:15723046-15723065 | None:intergenic | 25.0% |
| ! | AATAATCAAAGGGAAGAAAT+TGG | - | chr2_4:15723047-15723066 | None:intergenic | 25.0% |
| ! | ATTGTTTAATTACTTAGGGT+TGG | + | chr2_4:15723154-15723173 | Msa0317770:intron | 25.0% |
| !! | ACATTTTTCTACTCTTCTTT+AGG | + | chr2_4:15723301-15723320 | Msa0317770:intron | 25.0% |
| ! | TTTTTAACAACACTTGAGGT+TGG | + | chr2_4:15718710-15718729 | Msa0317770:five_prime_UTR | 30.0% |
| AAGAACCAAGATGTAAACTT+TGG | - | chr2_4:15718903-15718922 | None:intergenic | 30.0% | |
| !! | GAATTTTCTTTGAAAGGTGT+TGG | - | chr2_4:15718933-15718952 | None:intergenic | 30.0% |
| TCTTGTAGCATCAAACATTA+AGG | + | chr2_4:15718968-15718987 | Msa0317770:five_prime_UTR | 30.0% | |
| TACAATATAGCACTATAGCA+TGG | - | chr2_4:15719662-15719681 | None:intergenic | 30.0% | |
| TATTTCACAACAATAGCGAT+TGG | + | chr2_4:15719680-15719699 | Msa0317770:intron | 30.0% | |
| TGTGCCTCTTGTATTAAAAT+TGG | - | chr2_4:15719744-15719763 | None:intergenic | 30.0% | |
| !!! | TTTTCAAGTTTGCGTGATTT+TGG | + | chr2_4:15719779-15719798 | Msa0317770:intron | 30.0% |
| TATTTATGAGTTATGCGTCA+AGG | + | chr2_4:15719842-15719861 | Msa0317770:intron | 30.0% | |
| TATGCAGAATGTATTGGAAA+AGG | + | chr2_4:15719882-15719901 | Msa0317770:intron | 30.0% | |
| !!! | ATCTAGTTCTTTTACAGTTG+TGG | - | chr2_4:15720193-15720212 | None:intergenic | 30.0% |
| AACTATCTTACATTGAAAGC+AGG | - | chr2_4:15720631-15720650 | None:intergenic | 30.0% | |
| ! | TCTATCAATGTTTTGTCTGT+TGG | - | chr2_4:15720771-15720790 | None:intergenic | 30.0% |
| AGAATGAATTGGTTACAGAT+GGG | - | chr2_4:15720848-15720867 | None:intergenic | 30.0% | |
| AAGAATGAATTGGTTACAGA+TGG | - | chr2_4:15720849-15720868 | None:intergenic | 30.0% | |
| TTAATCTTCATTCTTTGGCT+CGG | - | chr2_4:15720901-15720920 | None:intergenic | 30.0% | |
| !!! | ATTTTTTACCGTGTCAATCT+TGG | + | chr2_4:15721000-15721019 | Msa0317770:intron | 30.0% |
| TTTAAATGCCAAGATTGACA+CGG | - | chr2_4:15721011-15721030 | None:intergenic | 30.0% | |
| TTTAATATTGTTGGATGGAG+TGG | - | chr2_4:15721106-15721125 | None:intergenic | 30.0% | |
| ACTCCATCCAACAATATTAA+AGG | + | chr2_4:15721105-15721124 | Msa0317770:intron | 30.0% | |
| !! | CTTGATGATGAAACAAATTG+GGG | - | chr2_4:15721208-15721227 | None:intergenic | 30.0% |
| TGAGCAACTTGAATACAATT+TGG | + | chr2_4:15721265-15721284 | Msa0317770:intron | 30.0% | |
| !! | TTGATTGATTTGCCTATTTG+TGG | - | chr2_4:15721379-15721398 | None:intergenic | 30.0% |
| !! | CGTAATTTTGAGGAGAAAAA+GGG | - | chr2_4:15721466-15721485 | None:intergenic | 30.0% |
| ATATATGTCTCTGTGTTTGT+GGG | - | chr2_4:15721504-15721523 | None:intergenic | 30.0% | |
| !!! | GGTCATGTTTTAGTCATTAA+AGG | - | chr2_4:15721643-15721662 | None:intergenic | 30.0% |
| ACTCTTCATGTGTTAATGTT+TGG | - | chr2_4:15721681-15721700 | None:intergenic | 30.0% | |
| ! | TCGTGTAATAAAAGCTTTGT+GGG | - | chr2_4:15721772-15721791 | None:intergenic | 30.0% |
| ATCGTGTAATAAAAGCTTTG+TGG | - | chr2_4:15721773-15721792 | None:intergenic | 30.0% | |
| ! | AAAACAGCATATTGACTACA+TGG | - | chr2_4:15721890-15721909 | None:intergenic | 30.0% |
| AGGGTTAATACTTGTAAAAC+AGG | - | chr2_4:15721920-15721939 | None:intergenic | 30.0% | |
| ! | TGCTATCAAGTTTTCGATAT+CGG | - | chr2_4:15722097-15722116 | None:intergenic | 30.0% |
| CTCCATAAAACTGACTAATA+AGG | + | chr2_4:15722182-15722201 | Msa0317770:intron | 30.0% | |
| ! | CACCTTATTAGTCAGTTTTA+TGG | - | chr2_4:15722187-15722206 | None:intergenic | 30.0% |
| TAAAACTGACTAATAAGGTG+AGG | + | chr2_4:15722187-15722206 | Msa0317770:intron | 30.0% | |
| TCAACATCTTAATCTCACAA+TGG | - | chr2_4:15722364-15722383 | None:intergenic | 30.0% | |
| ATTGAATACGTAGAAAGCAA+AGG | - | chr2_4:15722475-15722494 | None:intergenic | 30.0% | |
| TTCTTGAAACGCGTTAAATT+AGG | + | chr2_4:15722506-15722525 | Msa0317770:intron | 30.0% | |
| TACTAACTCACAAGTGTTAT+GGG | - | chr2_4:15722680-15722699 | None:intergenic | 30.0% | |
| TTACTAACTCACAAGTGTTA+TGG | - | chr2_4:15722681-15722700 | None:intergenic | 30.0% | |
| GTGTTTGCGTAATAATCAAA+GGG | - | chr2_4:15723057-15723076 | None:intergenic | 30.0% | |
| TGTGTTTGCGTAATAATCAA+AGG | - | chr2_4:15723058-15723077 | None:intergenic | 30.0% | |
| AGTAGAAAAATGTTTGTTCG+AGG | - | chr2_4:15723294-15723313 | None:intergenic | 30.0% | |
| TACAAGCTTGATTAAAGCAA+GGG | - | chr2_4:15723371-15723390 | None:intergenic | 30.0% | |
| ATACAAGCTTGATTAAAGCA+AGG | - | chr2_4:15723372-15723391 | None:intergenic | 30.0% | |
| !! | AAATGGATAGAGTTTTGTGG+TGG | - | chr2_4:15718751-15718770 | None:intergenic | 35.0% |
| ! | GAGAAATGGATAGAGTTTTG+TGG | - | chr2_4:15718754-15718773 | None:intergenic | 35.0% |
| !!! | GGTGTTTCCTTGTTTTTCAA+CGG | + | chr2_4:15718840-15718859 | Msa0317770:five_prime_UTR | 35.0% |
| ! | TTTGAGACCGTTGAAAAACA+AGG | - | chr2_4:15718850-15718869 | None:intergenic | 35.0% |
| AGGAACCAAAGTTTACATCT+TGG | + | chr2_4:15718895-15718914 | Msa0317770:five_prime_UTR | 35.0% | |
| TTGGAGAACTATCTCTGTTT+CGG | - | chr2_4:15719136-15719155 | None:intergenic | 35.0% | |
| AAACAGAGATAGTTCTCCAA+AGG | + | chr2_4:15719136-15719155 | Msa0317770:CDS | 35.0% | |
| TATCAAGAGAAGATCTTCAG+AGG | + | chr2_4:15719274-15719293 | Msa0317770:CDS | 35.0% | |
| ATCTTCAGAGGTAAACATCA+CGG | + | chr2_4:15719286-15719305 | Msa0317770:intron | 35.0% | |
| ! | TTTTGACGTCTATGCGATTA+AGG | - | chr2_4:15719455-15719474 | None:intergenic | 35.0% |
| GTGTGATATGCAGAATGTAT+TGG | + | chr2_4:15719876-15719895 | Msa0317770:intron | 35.0% | |
| AGAATCAAAGCAATCTGCAA+TGG | + | chr2_4:15720053-15720072 | Msa0317770:CDS | 35.0% | |
| AGAACTAGAACATGCAAGAA+AGG | + | chr2_4:15720161-15720180 | Msa0317770:CDS | 35.0% | |
| TTCTTCTCTTGATGCTTTCA+TGG | - | chr2_4:15720364-15720383 | None:intergenic | 35.0% | |
| AGAAGAACAGATTAAAGCGA+TGG | + | chr2_4:15720410-15720429 | Msa0317770:CDS | 35.0% | |
| GAAGAACAGATTAAAGCGAT+GGG | + | chr2_4:15720411-15720430 | Msa0317770:CDS | 35.0% | |
| AAATTAAGACCCTCTAAGCT+CGG | + | chr2_4:15720656-15720675 | Msa0317770:intron | 35.0% | |
| TCTAATCATTTCAAAGCCGT+GGG | - | chr2_4:15720692-15720711 | None:intergenic | 35.0% | |
| TTCTAATCATTTCAAAGCCG+TGG | - | chr2_4:15720693-15720712 | None:intergenic | 35.0% | |
| ! | TCAATGTTTTGTCTGTTGGT+GGG | - | chr2_4:15720767-15720786 | None:intergenic | 35.0% |
| ! | ATCAATGTTTTGTCTGTTGG+TGG | - | chr2_4:15720768-15720787 | None:intergenic | 35.0% |
| ! | ATGGTATGATGTCTTTTCGT+CGG | - | chr2_4:15720803-15720822 | None:intergenic | 35.0% |
| GAATGAATTGGTTACAGATG+GGG | - | chr2_4:15720847-15720866 | None:intergenic | 35.0% | |
| GGCAGAAATCAAGAATGAAT+TGG | - | chr2_4:15720859-15720878 | None:intergenic | 35.0% | |
| ! | TAATCTTCATTCTTTGGCTC+GGG | - | chr2_4:15720900-15720919 | None:intergenic | 35.0% |
| !! | TGTTTTAGATGAAAAGGGAG+AGG | - | chr2_4:15720972-15720991 | None:intergenic | 35.0% |
| GCTCCTTTAATATTGTTGGA+TGG | - | chr2_4:15721111-15721130 | None:intergenic | 35.0% | |
| GGTTCTTATTATCTGACAAG+TGG | - | chr2_4:15721303-15721322 | None:intergenic | 35.0% | |
| TTTGTGGACGTTTGTTTACT+TGG | - | chr2_4:15721363-15721382 | None:intergenic | 35.0% | |
| GTAAACAAACGTCCACAAAT+AGG | + | chr2_4:15721364-15721383 | Msa0317770:intron | 35.0% | |
| !! | GCGTAATTTTGAGGAGAAAA+AGG | - | chr2_4:15721467-15721486 | None:intergenic | 35.0% |
| TTTCTCCTCAAAATTACGCA+CGG | + | chr2_4:15721468-15721487 | Msa0317770:intron | 35.0% | |
| ! | AATTTCCGTGCGTAATTTTG+AGG | - | chr2_4:15721476-15721495 | None:intergenic | 35.0% |
| GATATATGTCTCTGTGTTTG+TGG | - | chr2_4:15721505-15721524 | None:intergenic | 35.0% | |
| ! | GTTTGGTCGTCAATGAATTT+TGG | - | chr2_4:15721664-15721683 | None:intergenic | 35.0% |
| ! | CGTGTAATAAAAGCTTTGTG+GGG | - | chr2_4:15721771-15721790 | None:intergenic | 35.0% |
| ! | GGAATCTAAGTTAAGTGTTG+TGG | - | chr2_4:15721799-15721818 | None:intergenic | 35.0% |
| GGTTTATCAAGCTTGTATTC+AGG | - | chr2_4:15721820-15721839 | None:intergenic | 35.0% | |
| AAGAGTAGGCATATTTCCAT+AGG | - | chr2_4:15721867-15721886 | None:intergenic | 35.0% | |
| ! | TATTGACTACATGGAAGAGT+AGG | - | chr2_4:15721881-15721900 | None:intergenic | 35.0% |
| TATTTAAGGAGGGTTGTACT+TGG | - | chr2_4:15721995-15722014 | None:intergenic | 35.0% | |
| ! | GATATCGAAAACTTGATAGC+AGG | + | chr2_4:15722096-15722115 | Msa0317770:intron | 35.0% |
| TCATACCATCTTAGAAATCG+TGG | + | chr2_4:15722144-15722163 | Msa0317770:intron | 35.0% | |
| TGTGAGACTCTTTAACATGA+AGG | + | chr2_4:15722235-15722254 | Msa0317770:intron | 35.0% | |
| GTGAACATAAATCGTGTATG+TGG | + | chr2_4:15722330-15722349 | Msa0317770:intron | 35.0% | |
| ! | AATGTTTGTTCGAGGCATTA+TGG | - | chr2_4:15723286-15723305 | None:intergenic | 35.0% |
| ! | TTCTACTCTTCTTTAGGAAC+CGG | + | chr2_4:15723307-15723326 | Msa0317770:intron | 35.0% |
| GTTCATGCATTTGTACAAAC+CGG | - | chr2_4:15723329-15723348 | None:intergenic | 35.0% | |
| ! | TATCCTTTTCATGTGCTTGT+AGG | + | chr2_4:15723389-15723408 | Msa0317770:intron | 35.0% |
| ! | ATCCTTTTCATGTGCTTGTA+GGG | + | chr2_4:15723390-15723409 | Msa0317770:intron | 35.0% |
| AGCACCATTTCAATCTGTCA+AGG | + | chr2_4:15719199-15719218 | Msa0317770:CDS | 40.0% | |
| !! | AAGGCTGCTATTGGTTTGTT+TGG | + | chr2_4:15719218-15719237 | Msa0317770:CDS | 40.0% |
| GAAGCAGGGTTATGACAAAA+TGG | - | chr2_4:15719519-15719538 | None:intergenic | 40.0% | |
| AGCATTCAATCTTCGAAGCA+GGG | - | chr2_4:15719533-15719552 | None:intergenic | 40.0% | |
| AAGCATTCAATCTTCGAAGC+AGG | - | chr2_4:15719534-15719553 | None:intergenic | 40.0% | |
| TGCTTCGAAGATTGAATGCT+TGG | + | chr2_4:15719533-15719552 | Msa0317770:intron | 40.0% | |
| ATCTGCAATGGAAGAAAGTG+AGG | + | chr2_4:15720065-15720084 | Msa0317770:CDS | 40.0% | |
| TCAAGCCAAAGAACTCGAAA+AGG | + | chr2_4:15720098-15720117 | Msa0317770:CDS | 40.0% | |
| !! | ACAAGATTTTGATGCCGCTT+TGG | + | chr2_4:15720242-15720261 | Msa0317770:CDS | 40.0% |
| GAAATTGGCTGCATTTCAGA+TGG | + | chr2_4:15720269-15720288 | Msa0317770:CDS | 40.0% | |
| CATTCTCGATGGAAGAAGTA+AGG | - | chr2_4:15720596-15720615 | None:intergenic | 40.0% | |
| !! | AATGTTTTGTCTGTTGGTGG+GGG | - | chr2_4:15720765-15720784 | None:intergenic | 40.0% |
| ! | CAATGTTTTGTCTGTTGGTG+GGG | - | chr2_4:15720766-15720785 | None:intergenic | 40.0% |
| GGGCTCAGACAAGTATAAAT+TGG | - | chr2_4:15720880-15720899 | None:intergenic | 40.0% | |
| TGAAATCAAGTCTGAAGGTG+TGG | - | chr2_4:15721054-15721073 | None:intergenic | 40.0% | |
| TGGGGCTCCTTTAATATTGT+TGG | - | chr2_4:15721115-15721134 | None:intergenic | 40.0% | |
| GATTATGTTCGCACTACTTG+GGG | - | chr2_4:15721133-15721152 | None:intergenic | 40.0% | |
| GGATTATGTTCGCACTACTT+GGG | - | chr2_4:15721134-15721153 | None:intergenic | 40.0% | |
| AGGATTATGTTCGCACTACT+TGG | - | chr2_4:15721135-15721154 | None:intergenic | 40.0% | |
| GTTGCGTATGCTTAAATGCT+GGG | - | chr2_4:15721176-15721195 | None:intergenic | 40.0% | |
| CAGCATTTAAGCATACGCAA+CGG | + | chr2_4:15721175-15721194 | Msa0317770:intron | 40.0% | |
| !! | ATTCAAGTTGCTCAACAACG+AGG | - | chr2_4:15721259-15721278 | None:intergenic | 40.0% |
| ! | TGTCTATGAGTAGGTTGGAT+CGG | - | chr2_4:15721324-15721343 | None:intergenic | 40.0% |
| TTTGAGGAGAAAAAGGGTAG+AGG | - | chr2_4:15721460-15721479 | None:intergenic | 40.0% | |
| !! | AAAGGCACTGTTATTCGTTC+AGG | - | chr2_4:15721625-15721644 | None:intergenic | 40.0% |
| GTAATATTCTTACCAGCCGT+CGG | - | chr2_4:15721737-15721756 | None:intergenic | 40.0% | |
| CGGCTGGTAAGAATATTACA+AGG | + | chr2_4:15721738-15721757 | Msa0317770:intron | 40.0% | |
| CAAAGTCAACATTCCTCCTA+TGG | + | chr2_4:15721848-15721867 | Msa0317770:intron | 40.0% | |
| AGTAGGCATATTTCCATAGG+AGG | - | chr2_4:15721864-15721883 | None:intergenic | 40.0% | |
| TGACGAAGTCCTATAAATCG+TGG | + | chr2_4:15722066-15722085 | Msa0317770:intron | 40.0% | |
| GACGAAGTCCTATAAATCGT+GGG | + | chr2_4:15722067-15722086 | Msa0317770:intron | 40.0% | |
| ! | ATCGAAAACTTGATAGCAGG+TGG | + | chr2_4:15722099-15722118 | Msa0317770:intron | 40.0% |
| ! | CTCAACCACGATTTCTAAGA+TGG | - | chr2_4:15722152-15722171 | None:intergenic | 40.0% |
| AGTCCTCTACGTGGAAATAT+AGG | - | chr2_4:15722447-15722466 | None:intergenic | 40.0% | |
| TACGCAAACACATTGTGTCA+AGG | + | chr2_4:15723066-15723085 | Msa0317770:intron | 40.0% | |
| AAGCTTGATTAAAGCAAGGG+AGG | - | chr2_4:15723368-15723387 | None:intergenic | 40.0% | |
| TGTAGGGCTATAAACAAGCA+TGG | + | chr2_4:15723406-15723425 | Msa0317770:intron | 40.0% | |
| TCCAAAGGAGACAGATTCTC+CGG | + | chr2_4:15719151-15719170 | Msa0317770:CDS | 45.0% | |
| GCAGCCTTGACAGATTGAAA+TGG | - | chr2_4:15719206-15719225 | None:intergenic | 45.0% | |
| CAATCTGTCAAGGCTGCTAT+TGG | + | chr2_4:15719209-15719228 | Msa0317770:CDS | 45.0% | |
| TTGGTGAAGTTCGTGTCAAC+CGG | + | chr2_4:15719237-15719256 | Msa0317770:CDS | 45.0% | |
| TTGTACCAGGAAGCAGATCA+TGG | + | chr2_4:15719365-15719384 | Msa0317770:intron | 45.0% | |
| CGTCAAAAACCTTGATGTCG+CGG | + | chr2_4:15719467-15719486 | Msa0317770:intron | 45.0% | |
| !! | CAGTTTTAACCGCGACATCA+AGG | - | chr2_4:15719479-15719498 | None:intergenic | 45.0% |
| GATTGAATGCTTGGTCCCAA+AGG | + | chr2_4:15719542-15719561 | Msa0317770:intron | 45.0% | |
| CGACTAACTAGCTACCATCT+CGG | - | chr2_4:15719573-15719592 | None:intergenic | 45.0% | |
| AAAGGAGACTCAGCTTCTCT+TGG | + | chr2_4:15719900-15719919 | Msa0317770:CDS | 45.0% | |
| AGCGCTTATCGAGCTTGATA+AGG | + | chr2_4:15719984-15720003 | Msa0317770:CDS | 45.0% | |
| !!! | TAGCGCCTTTTCGAGTTCTT+TGG | - | chr2_4:15720106-15720125 | None:intergenic | 45.0% |
| CGCTATCACAGAAAGCGATA+GGG | + | chr2_4:15720121-15720140 | Msa0317770:CDS | 45.0% | |
| AAGCGATAGGGTATGAAGCT+TGG | + | chr2_4:15720133-15720152 | Msa0317770:CDS | 45.0% | |
| !!! | AGATTTTGATGCCGCTTTGG+AGG | + | chr2_4:15720245-15720264 | Msa0317770:CDS | 45.0% |
| !! | TTGGTGGGGGTATTGTTGAA+GGG | - | chr2_4:15720752-15720771 | None:intergenic | 45.0% |
| !! | AATGCTGGGCTGATTTTCCA+GGG | - | chr2_4:15721162-15721181 | None:intergenic | 45.0% |
| !! | AAATGCTGGGCTGATTTTCC+AGG | - | chr2_4:15721163-15721182 | None:intergenic | 45.0% |
| CGTTGCGTATGCTTAAATGC+TGG | - | chr2_4:15721177-15721196 | None:intergenic | 45.0% | |
| TTACTTGGTTCCGAGGTGAT+GGG | - | chr2_4:15721348-15721367 | None:intergenic | 45.0% | |
| TTTACTTGGTTCCGAGGTGA+TGG | - | chr2_4:15721349-15721368 | None:intergenic | 45.0% | |
| CGTTTGTTTACTTGGTTCCG+AGG | - | chr2_4:15721355-15721374 | None:intergenic | 45.0% | |
| GGAGAAAAAGGGTAGAGGAT+CGG | - | chr2_4:15721455-15721474 | None:intergenic | 45.0% | |
| GACGGCAAAGAAGGATTTGT+GGG | - | chr2_4:15721560-15721579 | None:intergenic | 45.0% | |
| ATGTGATTCGACGGCAAAGA+AGG | - | chr2_4:15721569-15721588 | None:intergenic | 45.0% | |
| TTCTTTGCCGTCGAATCACA+TGG | + | chr2_4:15721568-15721587 | Msa0317770:intron | 45.0% | |
| GTATGCTCCATGTGATTCGA+CGG | - | chr2_4:15721578-15721597 | None:intergenic | 45.0% | |
| CACTGTTATTCGTTCAGGTG+AGG | - | chr2_4:15721620-15721639 | None:intergenic | 45.0% | |
| ! | ATAAAAGCTTTGTGGGGCGA+TGG | - | chr2_4:15721765-15721784 | None:intergenic | 45.0% |
| GAAGTCCTATAAATCGTGGG+TGG | + | chr2_4:15722070-15722089 | Msa0317770:intron | 45.0% | |
| ! | CTTGATAGCAGGTGGTTCAA+CGG | + | chr2_4:15722107-15722126 | Msa0317770:intron | 45.0% |
| !! | GGGCATTTGATAGCGTGTAA+GGG | + | chr2_4:15722408-15722427 | Msa0317770:intron | 45.0% |
| CGTGGAAATATAGGTGCATG+TGG | - | chr2_4:15722438-15722457 | None:intergenic | 45.0% | |
| GCACCTATATTTCCACGTAG+AGG | + | chr2_4:15722441-15722460 | Msa0317770:intron | 45.0% | |
| AAGGTTAAGAGTCCTCTACG+TGG | - | chr2_4:15722456-15722475 | None:intergenic | 45.0% | |
| GGAAGAAATTGGGAGCTTCT+AGG | - | chr2_4:15723036-15723055 | None:intergenic | 45.0% | |
| AGCCCTACAAGCACATGAAA+AGG | - | chr2_4:15723395-15723414 | None:intergenic | 45.0% | |
| GGGCTATAAACAAGCATGGT+TGG | + | chr2_4:15723410-15723429 | Msa0317770:intron | 45.0% | |
| !! | ACAAAAAAAAAAAAAAAAAA+AGG | - | chr2_4:15719349-15719368 | None:intergenic | 5.0% |
| !!! | TAATTTATTGATTTTAAAAA+AGG | + | chr2_4:15722981-15723000 | Msa0317770:intron | 5.0% |
| ACCGGAGAATCTGTCTCCTT+TGG | - | chr2_4:15719155-15719174 | None:intergenic | 50.0% | |
| AAAGGAGACAGATTCTCCGG+TGG | + | chr2_4:15719154-15719173 | Msa0317770:CDS | 50.0% | |
| AAGGAGACAGATTCTCCGGT+GGG | + | chr2_4:15719155-15719174 | Msa0317770:CDS | 50.0% | |
| TGGTGAAGTTCGTGTCAACC+GGG | + | chr2_4:15719238-15719257 | Msa0317770:CDS | 50.0% | |
| ACCATCTCGGTCATGCCTTT+GGG | - | chr2_4:15719560-15719579 | None:intergenic | 50.0% | |
| TACCATCTCGGTCATGCCTT+TGG | - | chr2_4:15719561-15719580 | None:intergenic | 50.0% | |
| GCGCTATCACAGAAAGCGAT+AGG | + | chr2_4:15720120-15720139 | Msa0317770:CDS | 50.0% | |
| AGCCAATTTCGCCTCCAAAG+CGG | - | chr2_4:15720259-15720278 | None:intergenic | 50.0% | |
| TTGGCTGCATTTCAGATGGC+AGG | + | chr2_4:15720273-15720292 | Msa0317770:CDS | 50.0% | |
| GCGTTCGGCGAAATTGAACT+CGG | + | chr2_4:15720305-15720324 | Msa0317770:CDS | 50.0% | |
| GAAGATAGGCCGAGCTTAGA+GGG | - | chr2_4:15720668-15720687 | None:intergenic | 50.0% | |
| AGAAGATAGGCCGAGCTTAG+AGG | - | chr2_4:15720669-15720688 | None:intergenic | 50.0% | |
| TCAAAGCCGTGGGAGAAGAT+AGG | - | chr2_4:15720682-15720701 | None:intergenic | 50.0% | |
| !! | TGGTGGGGGTATTGTTGAAG+GGG | - | chr2_4:15720751-15720770 | None:intergenic | 50.0% |
| !! | GTTGGTGGGGGTATTGTTGA+AGG | - | chr2_4:15720753-15720772 | None:intergenic | 50.0% |
| CGAACATAATCCTCGTACCC+TGG | + | chr2_4:15721142-15721161 | Msa0317770:intron | 50.0% | |
| TTAAGCATACGCAACGGACG+CGG | + | chr2_4:15721181-15721200 | Msa0317770:intron | 50.0% | |
| ! | TGGGGTGTCTATGAGTAGGT+TGG | - | chr2_4:15721329-15721348 | None:intergenic | 50.0% |
| ! | GTGATGGGGTGTCTATGAGT+AGG | - | chr2_4:15721333-15721352 | None:intergenic | 50.0% |
| TCATAGACACCCCATCACCT+CGG | + | chr2_4:15721335-15721354 | Msa0317770:intron | 50.0% | |
| TACTTGGTTCCGAGGTGATG+GGG | - | chr2_4:15721347-15721366 | None:intergenic | 50.0% | |
| !! | TAGAGGATCGGTTTTCAGGC+AGG | - | chr2_4:15721443-15721462 | None:intergenic | 50.0% |
| !! | AGGGTAGAGGATCGGTTTTC+AGG | - | chr2_4:15721447-15721466 | None:intergenic | 50.0% |
| CGACGGCAAAGAAGGATTTG+TGG | - | chr2_4:15721561-15721580 | None:intergenic | 50.0% | |
| TATTCTTACCAGCCGTCGGT+GGG | - | chr2_4:15721733-15721752 | None:intergenic | 50.0% | |
| ATATTCTTACCAGCCGTCGG+TGG | - | chr2_4:15721734-15721753 | None:intergenic | 50.0% | |
| TCGGACCACCCACGATTTAT+AGG | - | chr2_4:15722078-15722097 | None:intergenic | 50.0% | |
| GGTGGTTCAACGGATGTTGA+AGG | + | chr2_4:15722117-15722136 | Msa0317770:intron | 50.0% | |
| !! | TGAGTGGACTGTCCTCTAGA+CGG | + | chr2_4:15722387-15722406 | Msa0317770:intron | 50.0% |
| GCTATCAAATGCCCGTCTAG+AGG | - | chr2_4:15722402-15722421 | None:intergenic | 50.0% | |
| !! | CGGGCATTTGATAGCGTGTA+AGG | + | chr2_4:15722407-15722426 | Msa0317770:intron | 50.0% |
| AGATTCTCCGGTGGGAGAGA+GGG | + | chr2_4:15719163-15719182 | Msa0317770:CDS | 55.0% | |
| TCAATCTCCCTCTCTCCCAC+CGG | - | chr2_4:15719173-15719192 | None:intergenic | 55.0% | |
| ! | TCCCAAAGGCATGACCGAGA+TGG | + | chr2_4:15719556-15719575 | Msa0317770:intron | 55.0% |
| !! | TGCCGCTTTGGAGGCGAAAT+TGG | + | chr2_4:15720254-15720273 | Msa0317770:CDS | 55.0% |
| !! | GGCTGATTTTCCAGGGTACG+AGG | - | chr2_4:15721155-15721174 | None:intergenic | 55.0% |
| CTGACAAGTGGTGCGAAGCA+TGG | - | chr2_4:15721291-15721310 | None:intergenic | 55.0% | |
| !! | AGGATCGGTTTTCAGGCAGG+TGG | - | chr2_4:15721440-15721459 | None:intergenic | 55.0% |
| ! | GGTTTCCGGAGGATTGGTGA+CGG | - | chr2_4:15721710-15721729 | None:intergenic | 55.0% |
| ATTCTTACCAGCCGTCGGTG+GGG | - | chr2_4:15721732-15721751 | None:intergenic | 55.0% | |
| !! | GAGTGGACTGTCCTCTAGAC+GGG | + | chr2_4:15722388-15722407 | Msa0317770:intron | 55.0% |
| CAGATTCTCCGGTGGGAGAG+AGG | + | chr2_4:15719162-15719181 | Msa0317770:CDS | 60.0% | |
| TGCGGCCATGATCTGCTTCC+TGG | - | chr2_4:15719373-15719392 | None:intergenic | 60.0% | |
| GGCAGGAGAAGCTCAGCGTT+CGG | + | chr2_4:15720290-15720309 | Msa0317770:CDS | 60.0% | |
| GCTCGGCCTATCTTCTCCCA+CGG | + | chr2_4:15720673-15720692 | Msa0317770:intron | 60.0% | |
| !! | CGGAGGATTGGTGACGGTGT+GGG | - | chr2_4:15721704-15721723 | None:intergenic | 60.0% |
| CCACACCGTCACCAATCCTC+CGG | + | chr2_4:15721702-15721721 | Msa0317770:intron | 60.0% | |
| TTCTTACCAGCCGTCGGTGG+GGG | - | chr2_4:15721731-15721750 | None:intergenic | 60.0% | |
| !! | CCGGAGGATTGGTGACGGTG+TGG | - | chr2_4:15721705-15721724 | None:intergenic | 65.0% |
| GGTGGGGGTTTCCGGAGGAT+TGG | - | chr2_4:15721716-15721735 | None:intergenic | 65.0% | |
| CCTCCGGAAACCCCCACCGA+CGG | + | chr2_4:15721718-15721737 | Msa0317770:intron | 70.0% | |
| CAGCCGTCGGTGGGGGTTTC+CGG | - | chr2_4:15721724-15721743 | None:intergenic | 70.0% | |
| CCGTCGGTGGGGGTTTCCGG+AGG | - | chr2_4:15721721-15721740 | None:intergenic | 75.0% | |
| CGGAAACCCCCACCGACGGC+TGG | + | chr2_4:15721722-15721741 | Msa0317770:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 15718708 | 15723435 | 15718708 | ID=Msa0317770;Name=Msa0317770 |
| chr2_4 | mRNA | 15718708 | 15723435 | 15718708 | ID=Msa0317770-mRNA-1;Parent=Msa0317770;Name=Msa0317770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=314|0.66|0.5|0.75|0.66|0.5|4|0|251 |
| chr2_4 | exon | 15718708 | 15718989 | 15718708 | ID=Msa0317770-mRNA-1:exon:5896;Parent=Msa0317770-mRNA-1 |
| chr2_4 | exon | 15719093 | 15719295 | 15719093 | ID=Msa0317770-mRNA-1:exon:5897;Parent=Msa0317770-mRNA-1 |
| chr2_4 | exon | 15719889 | 15720448 | 15719889 | ID=Msa0317770-mRNA-1:exon:5898;Parent=Msa0317770-mRNA-1 |
| chr2_4 | exon | 15723411 | 15723435 | 15723411 | ID=Msa0317770-mRNA-1:exon:5899;Parent=Msa0317770-mRNA-1 |
| chr2_4 | five_prime_UTR | 15718708 | 15718989 | 15718708 | ID=Msa0317770-mRNA-1:five_prime_utr;Parent=Msa0317770-mRNA-1 |
| chr2_4 | five_prime_UTR | 15719093 | 15719124 | 15719093 | ID=Msa0317770-mRNA-1:five_prime_utr;Parent=Msa0317770-mRNA-1 |
| chr2_4 | CDS | 15719125 | 15719295 | 15719125 | ID=Msa0317770-mRNA-1:cds;Parent=Msa0317770-mRNA-1 |
| chr2_4 | CDS | 15719889 | 15720448 | 15719889 | ID=Msa0317770-mRNA-1:cds;Parent=Msa0317770-mRNA-1 |
| chr2_4 | CDS | 15723411 | 15723435 | 15723411 | ID=Msa0317770-mRNA-1:cds;Parent=Msa0317770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
