AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329630 MtrunA17_Chr8g0373411 76.489 319 67 3 1 313 1 317 1.20e-147 420
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 85 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAATCAACCATTGTCAAAA+TGG 0.188055 2_4:-43488183 None:intergenic
TGGAGGAGGGTTTGTTTGTT+AGG 0.253291 2_4:-43487751 None:intergenic
ACGACTTTCGATTTGGAGTA+TGG 0.269103 2_4:-43487829 None:intergenic
ACGACTTTCGATTTGGAGTA+TGG 0.269103 2_4:-43488219 None:intergenic
AAGTCGTATCGATAAATTAA+TGG 0.313006 2_4:+43487845 Msa0329630:CDS
TTAGCGGCGGCTGGCGGTGG+AGG 0.345735 2_4:-43487768 None:intergenic
TTAGCGGCGGCCGGCGGTGG+AGG 0.347728 2_4:-43487978 None:intergenic
GGAGATCCGGGTTTGATTCT+CGG 0.354677 2_4:+43492567 Msa0329630:three_prime_UTR
GCGGCGGCCGGCGGTGGAGG+AGG 0.356060 2_4:-43487975 None:intergenic
GCGGCGGCTGGCGGTGGAGG+AGG 0.358056 2_4:-43487765 None:intergenic
CTCACGAATAACTTCTTTGT+TGG 0.358997 2_4:-43488270 None:intergenic
TATCGATACGACTTTCGATT+TGG 0.359518 2_4:-43487836 None:intergenic
CAGTTTGACAATGGTTGATT+CGG 0.363585 2_4:+43487794 Msa0329630:exon
GAGATCCGGGTTAGGATATC+TGG 0.363671 2_4:+43492534 Msa0329630:three_prime_UTR
GAATTAGCGGCGGCTGGCGG+TGG 0.370125 2_4:-43487771 None:intergenic
ACCTGATGATTACAGAAATC+TGG 0.371292 2_4:+43488559 Msa0329630:CDS
GAATTAGCGGCGGCCGGCGG+TGG 0.372608 2_4:-43487981 None:intergenic
TATCGATACGACTTTCGATT+TGG 0.375478 2_4:-43488226 None:intergenic
CGAATCAACCATTGTCAAAC+TGG 0.391661 2_4:-43487793 None:intergenic
AAAATCAACCATTGTCGAAC+TGG 0.403034 2_4:-43488003 None:intergenic
ACGAATACCTTGTTCATTGT+TGG 0.403307 2_4:-43487877 None:intergenic
CAGGTTTCGAAACAAATTGA+TGG 0.406467 2_4:-43488541 None:intergenic
GCGGTGGAGGAGGGTTTGTA+AGG 0.409449 2_4:-43487965 None:intergenic
TCCAGATTTCTGTAATCATC+AGG 0.413475 2_4:-43488560 None:intergenic
TACAGGCATATCCAACCAAC+AGG 0.414999 2_4:+43488081 Msa0329630:CDS
AGTGAACAAACTCCTTCATT+TGG 0.419970 2_4:-43492332 None:intergenic
CGTGAGTTGAAGAGGCTTAG+TGG 0.427587 2_4:+43488287 Msa0329630:CDS
AAACCCTCATCCACCACAAC+CGG 0.443154 2_4:+43488148 Msa0329630:CDS
GGATTAGCGTCGGCCGGTTG+TGG 0.443586 2_4:-43488161 None:intergenic
CGGCGGCTGGCGGTGGAGGA+GGG 0.444108 2_4:-43487764 None:intergenic
CGGCGGCCGGCGGTGGAGGA+GGG 0.453878 2_4:-43487974 None:intergenic
GGATTAAACAAACTATGTTC+TGG 0.457730 2_4:-43488449 None:intergenic
ACGAATAACTTCTTTGTTGG+TGG 0.458657 2_4:-43488267 None:intergenic
TAAAATGCAATAGGTTCTGA+TGG 0.462667 2_4:+43492224 Msa0329630:intron
TCGGCCGGTTGTGGTGGATG+AGG 0.465572 2_4:-43488152 None:intergenic
ATAACTTCTTTGTTGGTGGT+TGG 0.466863 2_4:-43488263 None:intergenic
TAATAGTCGAGATCCGGGTT+AGG 0.472037 2_4:+43492526 Msa0329630:three_prime_UTR
TTGAGGACTTACTTCAAAGT+TGG 0.473329 2_4:-43488827 None:intergenic
GGAACAAATTATTAGTGAGT+TGG 0.481276 2_4:+43488103 Msa0329630:CDS
CGCTAATTCCAGTTCGACAA+TGG 0.485959 2_4:+43487995 Msa0329630:CDS
GAATCAACCATTGTCAAAAT+GGG 0.486080 2_4:-43488182 None:intergenic
TCGTGGCTTGAACGCAATCC+TGG 0.486195 2_4:+43488623 Msa0329630:CDS
AGGTGATGATGCTGTGATGC+TGG 0.487466 2_4:+43492287 Msa0329630:CDS
ACTAATAATTTGTTCCCTGT+TGG 0.487749 2_4:-43488096 None:intergenic
CGATCGTATCTATCAACTAC+AGG 0.488463 2_4:+43488064 Msa0329630:CDS
GAGAATCAAACCCGGATCTC+CGG 0.494063 2_4:-43492565 None:intergenic
AGGACTTACTTCAAAGTTGG+CGG 0.494921 2_4:-43488824 None:intergenic
CGGCCGGTTGTGGTGGATGA+GGG 0.499241 2_4:-43488151 None:intergenic
AGAAGCATCGGATCACCATC+AGG 0.500172 2_4:-43488491 None:intergenic
CTACTGCCTTTCAAAATAGC+TGG 0.500559 2_4:-43492498 None:intergenic
GGTTCTGATGGGTTTGCCGT+TGG 0.507165 2_4:+43492236 Msa0329630:intron
ATAATTTGTTCCCTGTTGGT+TGG 0.514061 2_4:-43488092 None:intergenic
CGCTAATTCCAGTTTGACAA+TGG 0.515282 2_4:+43487785 Msa0329630:exon
GATGAAGATGCTAGAGCAAA+AGG 0.518055 2_4:+43492267 Msa0329630:CDS
AAGTTATTCGTGAGTTGAAG+AGG 0.523412 2_4:+43488279 Msa0329630:CDS
AAACTGGAATTAGCGGCGGC+TGG 0.530827 2_4:-43487777 None:intergenic
ATACCTTGTTCATTGTTGGT+TGG 0.548488 2_4:-43487873 None:intergenic
TTAGCGTCGGCCGGTTGTGG+TGG 0.548554 2_4:-43488158 None:intergenic
CCGGGTTTGATTCTCGGCAA+TGG 0.553127 2_4:+43492573 Msa0329630:three_prime_UTR
TACAAACCCTCCTCCACCGC+CGG 0.553250 2_4:+43487968 Msa0329630:CDS
CATTGTCAAACTGGAATTAG+CGG 0.554257 2_4:-43487784 None:intergenic
AAAATGCAATAGGTTCTGAT+GGG 0.560085 2_4:+43492225 Msa0329630:intron
CATTGTCGAACTGGAATTAG+CGG 0.561644 2_4:-43487994 None:intergenic
ACTATGTTCTGGTGAAGCAA+AGG 0.570024 2_4:-43488438 None:intergenic
GAACTGGAATTAGCGGCGGC+CGG 0.573910 2_4:-43487987 None:intergenic
CTGGAATTAGCGGCGGCCGG+CGG 0.578842 2_4:-43487984 None:intergenic
ATTGAGAAAACTTGTGTCGT+TGG 0.579887 2_4:+43488395 Msa0329630:CDS
ATAGCTGGTAGTATTGAGAA+AGG 0.584255 2_4:-43492483 None:intergenic
AAGTCGTATCGATAAACTAA+AGG 0.586014 2_4:+43488235 Msa0329630:CDS
ACTTACTTCAAAGTTGGCGG+CGG 0.600192 2_4:-43488821 None:intergenic
GAGATGTTAGAGCCAAATGA+AGG 0.610586 2_4:+43492320 Msa0329630:three_prime_UTR
TCTTAATTGTAGTACTAGTG+TGG 0.613934 2_4:+43492403 Msa0329630:three_prime_UTR
TCTTCATCATCATGCTCCAA+CGG 0.617314 2_4:-43492252 None:intergenic
AAAATGGGATTAGCGTCGGC+CGG 0.620552 2_4:-43488167 None:intergenic
TCGTATCGATAAACTAAAGG+AGG 0.621892 2_4:+43488238 Msa0329630:CDS
CTGGAATTAGCGGCGGCTGG+CGG 0.623774 2_4:-43487774 None:intergenic
TCTGTATCAATGCTAAGTCG+TGG 0.641490 2_4:+43488606 Msa0329630:CDS
TGTCAAAATGGGATTAGCGT+CGG 0.644494 2_4:-43488171 None:intergenic
CCATTGCCGAGAATCAAACC+CGG 0.652634 2_4:-43492573 None:intergenic
AAAAGCCAGATATCCTAACC+CGG 0.662428 2_4:-43492539 None:intergenic
GATCCAACCAACAATGAACA+AGG 0.663048 2_4:+43487870 Msa0329630:CDS
ACACTCAAATCATTAACACC+AGG 0.670543 2_4:-43488641 None:intergenic
TGTCAAACTGGAATTAGCGG+CGG 0.685168 2_4:-43487781 None:intergenic
TGTCGAACTGGAATTAGCGG+CGG 0.685336 2_4:-43487991 None:intergenic
ACAGGCATATCCAACCAACA+GGG 0.734249 2_4:+43488082 Msa0329630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTAAGAATTTTAAATT+TGG + chr2_4:43488865-43488884 Msa0329630:intron 10.0%
!!! TCATAATAATTTTATTGTTT+TGG - chr2_4:43489461-43489480 None:intergenic 10.0%
!! TACTAGATAATATATAATAT+TGG + chr2_4:43489722-43489741 Msa0329630:intron 10.0%
!! TAAAATTAGTTATATTACCT+TGG + chr2_4:43488889-43488908 Msa0329630:intron 15.0%
!! AATTATGACTAAATTATCAT+TGG + chr2_4:43489033-43489052 Msa0329630:intron 15.0%
!! ATTATGACTAAATTATCATT+GGG + chr2_4:43489034-43489053 Msa0329630:intron 15.0%
!!! TTTGTTAATTTATTTTAGTG+TGG + chr2_4:43489176-43489195 Msa0329630:intron 15.0%
!! AATAATATTGATGAACAATA+AGG - chr2_4:43489342-43489361 None:intergenic 15.0%
!! AGATATTCAAATTTATTGTA+TGG - chr2_4:43491026-43491045 None:intergenic 15.0%
!! TCTTCTTACTAAAAATGATT+TGG + chr2_4:43488511-43488530 Msa0329630:CDS 20.0%
!!! ATTAATTTGCATGTTTTTTC+AGG + chr2_4:43488777-43488796 Msa0329630:intron 20.0%
!! GATAATTTAGTCATGATTTA+GGG - chr2_4:43489079-43489098 None:intergenic 20.0%
!! TGATAATTTAGTCATGATTT+AGG - chr2_4:43489080-43489099 None:intergenic 20.0%
!! AATCATGACTAAATTATCAT+TGG + chr2_4:43489081-43489100 Msa0329630:intron 20.0%
!! ATCATGACTAAATTATCATT+GGG + chr2_4:43489082-43489101 Msa0329630:intron 20.0%
!! CAATATTATTCAGTATATAG+TGG + chr2_4:43489352-43489371 Msa0329630:intron 20.0%
!! AAAAATTCTACAACTAACAA+TGG - chr2_4:43489429-43489448 None:intergenic 20.0%
!! ATGTTGTTATATCGTATTTA+TGG + chr2_4:43489672-43489691 Msa0329630:intron 20.0%
!! TAAGTAGTTTACTGTTAAAT+TGG + chr2_4:43489950-43489969 Msa0329630:intron 20.0%
!!! ATTTTAATTGTTCAGAGTTA+AGG + chr2_4:43492165-43492184 Msa0329630:intron 20.0%
!! AATTACCAAACATTATTCTT+TGG - chr2_4:43492201-43492220 None:intergenic 20.0%
!! GTAATTGATTAAAATGCAAT+AGG + chr2_4:43492215-43492234 Msa0329630:intron 20.0%
!!! TGTGGTTTTTTTTCTTTTCT+GGG - chr2_4:43487719-43487738 None:intergenic 25.0%
!! AAGTCGTATCGATAAATTAA+TGG + chr2_4:43487845-43487864 Msa0329630:CDS 25.0%
!!! TTTTTAGTAAGAAGAAGCAT+CGG - chr2_4:43488506-43488525 None:intergenic 25.0%
! AGTTATATTACCTTGGTTAT+TGG + chr2_4:43488896-43488915 Msa0329630:intron 25.0%
! AACAGAAATAAACAAATGAC+AGG - chr2_4:43489251-43489270 None:intergenic 25.0%
! AGGTAAAACTTTAACTATGT+TGG - chr2_4:43489753-43489772 None:intergenic 25.0%
!! ACATAGTTAAAGTTTTACCT+TGG + chr2_4:43489753-43489772 Msa0329630:intron 25.0%
! TTTGGAAGTTCAAATAATCA+AGG - chr2_4:43489779-43489798 None:intergenic 25.0%
!!! TGTGTTGTTATTTGGAATTT+TGG + chr2_4:43489821-43489840 Msa0329630:intron 25.0%
!!! TTGTTATTTGGAATTTTGGA+TGG + chr2_4:43489825-43489844 Msa0329630:intron 25.0%
! TTTGCTGCTAATTTACTATT+TGG + chr2_4:43490141-43490160 Msa0329630:intron 25.0%
! TTGCTGCTAATTTACTATTT+GGG + chr2_4:43490142-43490161 Msa0329630:intron 25.0%
! TAGAATCATTGGTCAAAATA+GGG - chr2_4:43490187-43490206 None:intergenic 25.0%
! ATAGAATCATTGGTCAAAAT+AGG - chr2_4:43490188-43490207 None:intergenic 25.0%
! TGTGTTAAAAGTCTAATTGA+TGG - chr2_4:43490349-43490368 None:intergenic 25.0%
!! TCAATTAGACTTTTAACACA+TGG + chr2_4:43490349-43490368 Msa0329630:intron 25.0%
!!! TAGCTTCTCAATTTTTGTTT+TGG - chr2_4:43490600-43490619 None:intergenic 25.0%
! TTGGATTCTCTTTATTAATG+TGG + chr2_4:43491083-43491102 Msa0329630:intron 25.0%
! TGGATTCTCTTTATTAATGT+GGG + chr2_4:43491084-43491103 Msa0329630:intron 25.0%
! AATTGTCAACTAGAGTTTAT+AGG + chr2_4:43491171-43491190 Msa0329630:intron 25.0%
! ACATGGAAAACAGAAATAAA+AGG - chr2_4:43491214-43491233 None:intergenic 25.0%
! TATCAATCAAAAACATGTCT+GGG - chr2_4:43491389-43491408 None:intergenic 25.0%
!!! ACATGTTTTTGATTGATACT+TGG + chr2_4:43491391-43491410 Msa0329630:intron 25.0%
!! ATACTTGGACTAAATTTTGA+GGG + chr2_4:43491406-43491425 Msa0329630:intron 25.0%
! ACATAACAGAATGCAATTAA+AGG - chr2_4:43491442-43491461 None:intergenic 25.0%
! TAAGTCATTTACATTGTTGT+GGG + chr2_4:43491564-43491583 Msa0329630:intron 25.0%
!!! GTGTGGTTTTTTTTCTTTTC+TGG - chr2_4:43487720-43487739 None:intergenic 30.0%
!! ACTAATAATTTGTTCCCTGT+TGG - chr2_4:43488099-43488118 None:intergenic 30.0%
GGAACAAATTATTAGTGAGT+TGG + chr2_4:43488103-43488122 Msa0329630:CDS 30.0%
GAATCAACCATTGTCAAAAT+GGG - chr2_4:43488185-43488204 None:intergenic 30.0%
!! CATTTTGACAATGGTTGATT+CGG + chr2_4:43488184-43488203 Msa0329630:CDS 30.0%
! AAGTCGTATCGATAAACTAA+AGG + chr2_4:43488235-43488254 Msa0329630:CDS 30.0%
! TTTCTCAATCATCTTTTCCA+AGG - chr2_4:43488384-43488403 None:intergenic 30.0%
GGATTAAACAAACTATGTTC+TGG - chr2_4:43488452-43488471 None:intergenic 30.0%
! GGAAAGATAAAAAGCATATC+TGG - chr2_4:43488473-43488492 None:intergenic 30.0%
!! ATGCTTTTTATCTTTCCTGA+TGG + chr2_4:43488476-43488495 Msa0329630:CDS 30.0%
!!! AATTTGCATGTTTTTTCAGG+AGG + chr2_4:43488780-43488799 Msa0329630:intron 30.0%
! AAGTAAGTCCTCAATTTGTT+TGG + chr2_4:43488836-43488855 Msa0329630:intron 30.0%
TTGGTTATTGGTACTGTTAT+GGG + chr2_4:43488908-43488927 Msa0329630:intron 30.0%
TAAATTGCAACTGTGTGAAT+CGG - chr2_4:43488952-43488971 None:intergenic 30.0%
AATTAAGAGGCAAGAGATTT+AGG - chr2_4:43489402-43489421 None:intergenic 30.0%
TAACAATGGCATCAATTAAG+AGG - chr2_4:43489415-43489434 None:intergenic 30.0%
TCCATTTCATAGAAACAAAC+TGG - chr2_4:43489586-43489605 None:intergenic 30.0%
!! AGTTTGTTTCTATGAAATGG+AGG + chr2_4:43489585-43489604 Msa0329630:intron 30.0%
TGAACTTCCAAATTATGTGA+AGG + chr2_4:43489787-43489806 Msa0329630:intron 30.0%
!! GCATTATTGATGACGATATT+TGG + chr2_4:43489862-43489881 Msa0329630:intron 30.0%
!! TATTGATGACGATATTTGGA+TGG + chr2_4:43489866-43489885 Msa0329630:intron 30.0%
!! GTGATGTGTTTTGTTCTATA+GGG - chr2_4:43490069-43490088 None:intergenic 30.0%
!! AGTGATGTGTTTTGTTCTAT+AGG - chr2_4:43490070-43490089 None:intergenic 30.0%
CTAGGAAGTAGTACAATTAA+AGG - chr2_4:43490458-43490477 None:intergenic 30.0%
! ATTGATTGCTATTACTCCTA+GGG + chr2_4:43490478-43490497 Msa0329630:intron 30.0%
GTGATCTCATTATACATACA+TGG + chr2_4:43490545-43490564 Msa0329630:intron 30.0%
!! AATGTGATAATGTTGACTCT+TGG - chr2_4:43490707-43490726 None:intergenic 30.0%
! GCTAATTGCTATTGTTGATT+TGG + chr2_4:43491064-43491083 Msa0329630:intron 30.0%
TGTATCTTGTGAGTTTAGTT+AGG + chr2_4:43491110-43491129 Msa0329630:intron 30.0%
CATAGACAAAATAACAGCTT+AGG - chr2_4:43491268-43491287 None:intergenic 30.0%
CAACACAAATAAAGAGAACA+AGG - chr2_4:43491304-43491323 None:intergenic 30.0%
! CTTGTTCTCTTTATTTGTGT+TGG + chr2_4:43491302-43491321 Msa0329630:intron 30.0%
! TTGGTTGATATATGACATGA+GGG + chr2_4:43491321-43491340 Msa0329630:intron 30.0%
ATCAATCAAAAACATGTCTG+GGG - chr2_4:43491388-43491407 None:intergenic 30.0%
GTATCAATCAAAAACATGTC+TGG - chr2_4:43491390-43491409 None:intergenic 30.0%
! GATACTTGGACTAAATTTTG+AGG + chr2_4:43491405-43491424 Msa0329630:intron 30.0%
!! CTAAATTTTGAGGGAGAAAA+TGG + chr2_4:43491415-43491434 Msa0329630:intron 30.0%
GCATTCTGTTATGTTTATTG+AGG + chr2_4:43491448-43491467 Msa0329630:intron 30.0%
TTGGATAGCTTGATAAAAGA+GGG + chr2_4:43491481-43491500 Msa0329630:intron 30.0%
CTAAGTCATTTACATTGTTG+TGG + chr2_4:43491563-43491582 Msa0329630:intron 30.0%
AAGTCAAGAAAAACTCTGTA+AGG + chr2_4:43491973-43491992 Msa0329630:intron 30.0%
!!! TCTTCTTCTTTTGAAGTCAA+TGG + chr2_4:43492013-43492032 Msa0329630:intron 30.0%
! TAAAATGCAATAGGTTCTGA+TGG + chr2_4:43492224-43492243 Msa0329630:intron 30.0%
! AAAATGCAATAGGTTCTGAT+GGG + chr2_4:43492225-43492244 Msa0329630:intron 30.0%
TCTTAATTGTAGTACTAGTG+TGG + chr2_4:43492403-43492422 Msa0329630:three_prime_UTR 30.0%
!! ATACTACCAGCTATTTTGAA+AGG + chr2_4:43492492-43492511 Msa0329630:three_prime_UTR 30.0%
CATTGTCAAACTGGAATTAG+CGG - chr2_4:43487787-43487806 None:intergenic 35.0%
CAGTTTGACAATGGTTGATT+CGG + chr2_4:43487794-43487813 Msa0329630:exon 35.0%
TATCGATACGACTTTCGATT+TGG - chr2_4:43487839-43487858 None:intergenic 35.0%
ATACCTTGTTCATTGTTGGT+TGG - chr2_4:43487876-43487895 None:intergenic 35.0%
ACGAATACCTTGTTCATTGT+TGG - chr2_4:43487880-43487899 None:intergenic 35.0%
AAAATCAACCATTGTCGAAC+TGG - chr2_4:43488006-43488025 None:intergenic 35.0%
!! ATAATTTGTTCCCTGTTGGT+TGG - chr2_4:43488095-43488114 None:intergenic 35.0%
CGAATCAACCATTGTCAAAA+TGG - chr2_4:43488186-43488205 None:intergenic 35.0%
TATCGATACGACTTTCGATT+TGG - chr2_4:43487839-43487858 None:intergenic 35.0%
! TCGTATCGATAAACTAAAGG+AGG + chr2_4:43488238-43488257 Msa0329630:CDS 35.0%
!! ATAACTTCTTTGTTGGTGGT+TGG - chr2_4:43488266-43488285 None:intergenic 35.0%
ACGAATAACTTCTTTGTTGG+TGG - chr2_4:43488270-43488289 None:intergenic 35.0%
CTCACGAATAACTTCTTTGT+TGG - chr2_4:43488273-43488292 None:intergenic 35.0%
! AAGTTATTCGTGAGTTGAAG+AGG + chr2_4:43488279-43488298 Msa0329630:CDS 35.0%
ATTGAGAAAACTTGTGTCGT+TGG + chr2_4:43488395-43488414 Msa0329630:CDS 35.0%
CAGGTTTCGAAACAAATTGA+TGG - chr2_4:43488544-43488563 None:intergenic 35.0%
ACCTGATGATTACAGAAATC+TGG + chr2_4:43488559-43488578 Msa0329630:CDS 35.0%
TCCAGATTTCTGTAATCATC+AGG - chr2_4:43488563-43488582 None:intergenic 35.0%
ACACTCAAATCATTAACACC+AGG - chr2_4:43488644-43488663 None:intergenic 35.0%
TAGTATATCCAATCCAGCAA+AGG - chr2_4:43488740-43488759 None:intergenic 35.0%
TTGAGGACTTACTTCAAAGT+TGG - chr2_4:43488830-43488849 None:intergenic 35.0%
!! TCCTCAATTTGTTTGGTGTT+TGG + chr2_4:43488843-43488862 Msa0329630:intron 35.0%
ACCAAACACCAAACAAATTG+AGG - chr2_4:43488847-43488866 None:intergenic 35.0%
CATAACAGTACCAATAACCA+AGG - chr2_4:43488909-43488928 None:intergenic 35.0%
CTTGGTTATTGGTACTGTTA+TGG + chr2_4:43488907-43488926 Msa0329630:intron 35.0%
AAATTGCAACTGTGTGAATC+GGG - chr2_4:43488951-43488970 None:intergenic 35.0%
TTCACACAGTTGCAATTTAC+AGG + chr2_4:43488953-43488972 Msa0329630:intron 35.0%
TCACACAGTTGCAATTTACA+GGG + chr2_4:43488954-43488973 Msa0329630:intron 35.0%
GGGAAAAAATAGATCGACAA+TGG + chr2_4:43488974-43488993 Msa0329630:intron 35.0%
! TGTGTGTTTGTCTTTTCCAT+TGG + chr2_4:43489105-43489124 Msa0329630:intron 35.0%
!! TAGTGTGGAATTTGCTAAGT+AGG + chr2_4:43489191-43489210 Msa0329630:intron 35.0%
!! GCCAGTTTGTTTCTATGAAA+TGG + chr2_4:43489582-43489601 Msa0329630:intron 35.0%
ATTTGTGTATAGTAGCGCTT+AGG + chr2_4:43489630-43489649 Msa0329630:intron 35.0%
AATGATGCACATACTAACCA+GGG - chr2_4:43489701-43489720 None:intergenic 35.0%
AGTTCAAATAATCAAGGCCA+AGG - chr2_4:43489773-43489792 None:intergenic 35.0%
AGGCTTTCCTTCACATAATT+TGG - chr2_4:43489797-43489816 None:intergenic 35.0%
TCCAAATAACAACACAACAC+AGG - chr2_4:43489817-43489836 None:intergenic 35.0%
! TTTTGTTCTATAGGGATGTG+AGG - chr2_4:43490061-43490080 None:intergenic 35.0%
CAGTCAGGAAATAGAATCAT+TGG - chr2_4:43490198-43490217 None:intergenic 35.0%
CAATGATTCTATTTCCTGAC+TGG + chr2_4:43490196-43490215 Msa0329630:intron 35.0%
ATAGAGACAATTGTTGTGGA+AGG - chr2_4:43490257-43490276 None:intergenic 35.0%
GGATATAGAGACAATTGTTG+TGG - chr2_4:43490261-43490280 None:intergenic 35.0%
TGCTTACAATAGGACTTATG+TGG - chr2_4:43490282-43490301 None:intergenic 35.0%
TTGAGTTATGGCATATAGAG+AGG - chr2_4:43490387-43490406 None:intergenic 35.0%
!! TCTTCTCAAGCATTGAGTTA+TGG - chr2_4:43490399-43490418 None:intergenic 35.0%
GGAGTAATAGCAATCAATCT+AGG - chr2_4:43490476-43490495 None:intergenic 35.0%
! GATTGATTGCTATTACTCCT+AGG + chr2_4:43490477-43490496 Msa0329630:intron 35.0%
AGTATCATCTACTTGACTCA+CGG + chr2_4:43490619-43490638 Msa0329630:intron 35.0%
TTAAGAAACCTTTCTGCTTG+TGG + chr2_4:43490663-43490682 Msa0329630:intron 35.0%
ATACATGTCATTACCTGTGT+AGG + chr2_4:43490765-43490784 Msa0329630:intron 35.0%
! GATTTGACTTTCGTGAGAAA+AGG - chr2_4:43490890-43490909 None:intergenic 35.0%
GTCAAATCTGTAGTTGAGTA+AGG + chr2_4:43490902-43490921 Msa0329630:intron 35.0%
! TTCTGTTTTCCATGTTGAAG+AGG + chr2_4:43491219-43491238 Msa0329630:intron 35.0%
! TCTGTTTTCCATGTTGAAGA+GGG + chr2_4:43491220-43491239 Msa0329630:intron 35.0%
! GTTGGTTGATATATGACATG+AGG + chr2_4:43491320-43491339 Msa0329630:intron 35.0%
TTGATATATGACATGAGGGA+TGG + chr2_4:43491325-43491344 Msa0329630:intron 35.0%
TGATATATGACATGAGGGAT+GGG + chr2_4:43491326-43491345 Msa0329630:intron 35.0%
ATGTTTATTGAGGCGTAAAG+TGG + chr2_4:43491458-43491477 Msa0329630:intron 35.0%
GTTGGATAGCTTGATAAAAG+AGG + chr2_4:43491480-43491499 Msa0329630:intron 35.0%
ATAGCTTGATAAAAGAGGGT+TGG + chr2_4:43491485-43491504 Msa0329630:intron 35.0%
! AGTTTAGAATATGCACTGTC+TGG + chr2_4:43491615-43491634 Msa0329630:intron 35.0%
CATGTAATGCACTAATGTGT+TGG + chr2_4:43491641-43491660 Msa0329630:intron 35.0%
! TAATGCACTAATGTGTTGGT+AGG + chr2_4:43491645-43491664 Msa0329630:intron 35.0%
!!! TTGCATGTTTTTTCAGACAC+CGG + chr2_4:43491885-43491904 Msa0329630:intron 35.0%
! AGTTTTTCCCTTTCCATTTC+CGG - chr2_4:43491907-43491926 None:intergenic 35.0%
TATACATATGTTAGCCCACA+TGG + chr2_4:43492081-43492100 Msa0329630:intron 35.0%
AGTGAACAAACTCCTTCATT+TGG - chr2_4:43492335-43492354 None:intergenic 35.0%
!!! GCTGTTTTGAGTTCAAAGTT+GGG - chr2_4:43492374-43492393 None:intergenic 35.0%
!!! AGCTGTTTTGAGTTCAAAGT+TGG - chr2_4:43492375-43492394 None:intergenic 35.0%
! ATAGCTGGTAGTATTGAGAA+AGG - chr2_4:43492486-43492505 None:intergenic 35.0%
!! GCATTTTAATAGTCGAGATC+CGG + chr2_4:43492520-43492539 Msa0329630:three_prime_UTR 35.0%
!! CATTTTAATAGTCGAGATCC+GGG + chr2_4:43492521-43492540 Msa0329630:three_prime_UTR 35.0%
CGCTAATTCCAGTTTGACAA+TGG + chr2_4:43487785-43487804 Msa0329630:exon 40.0%
CGAATCAACCATTGTCAAAC+TGG - chr2_4:43487796-43487815 None:intergenic 40.0%
!! ACGACTTTCGATTTGGAGTA+TGG - chr2_4:43487832-43487851 None:intergenic 40.0%
GATCCAACCAACAATGAACA+AGG + chr2_4:43487870-43487889 Msa0329630:CDS 40.0%
CATTGTCGAACTGGAATTAG+CGG - chr2_4:43487997-43488016 None:intergenic 40.0%
CGATCGTATCTATCAACTAC+AGG + chr2_4:43488064-43488083 Msa0329630:CDS 40.0%
! TGTCAAAATGGGATTAGCGT+CGG - chr2_4:43488174-43488193 None:intergenic 40.0%
!! CGCTAATCCCATTTTGACAA+TGG + chr2_4:43488175-43488194 Msa0329630:CDS 40.0%
!! ACGACTTTCGATTTGGAGTA+TGG - chr2_4:43487832-43487851 None:intergenic 40.0%
ACTATGTTCTGGTGAAGCAA+AGG - chr2_4:43488441-43488460 None:intergenic 40.0%
TCTGTATCAATGCTAAGTCG+TGG + chr2_4:43488606-43488625 Msa0329630:CDS 40.0%
!!! TTTTGTTGCTTTGCCTTTGC+TGG + chr2_4:43488724-43488743 Msa0329630:intron 40.0%
AGGACTTACTTCAAAGTTGG+CGG - chr2_4:43488827-43488846 None:intergenic 40.0%
TTATTGGTACTGTTATGGGC+TGG + chr2_4:43488912-43488931 Msa0329630:intron 40.0%
!! GGAATTTGCTAAGTAGGAAC+CGG + chr2_4:43489197-43489216 Msa0329630:intron 40.0%
ATGAACAATAAGGACTGCAG+AGG - chr2_4:43489332-43489351 None:intergenic 40.0%
CACAACAGCTAAGATGCATT+GGG - chr2_4:43489503-43489522 None:intergenic 40.0%
TATCGTATTTATGGAACCCC+TGG + chr2_4:43489681-43489700 Msa0329630:intron 40.0%
ATGATGCACATACTAACCAG+GGG - chr2_4:43489700-43489719 None:intergenic 40.0%
GAATGATGCACATACTAACC+AGG - chr2_4:43489702-43489721 None:intergenic 40.0%
! GCCTGTGTTGTGTTGTTATT+TGG + chr2_4:43489813-43489832 Msa0329630:intron 40.0%
ATCGGATAAAATGGAGGAAG+GGG - chr2_4:43489990-43490009 None:intergenic 40.0%
CATCGGATAAAATGGAGGAA+GGG - chr2_4:43489991-43490010 None:intergenic 40.0%
TTCTGTCCAAACCCATTATG+TGG - chr2_4:43490119-43490138 None:intergenic 40.0%
TGGTCAAAATAGGGCCATAA+AGG - chr2_4:43490178-43490197 None:intergenic 40.0%
! GTCCTCAAAGAGGTTTTCTA+CGG - chr2_4:43490231-43490250 None:intergenic 40.0%
! ACACTGGCTATGCTTACAAT+AGG - chr2_4:43490292-43490311 None:intergenic 40.0%
! CATAGCCAGTGTTATTACCA+AGG + chr2_4:43490300-43490319 Msa0329630:intron 40.0%
! CCTTTCCTTGGTAATAACAC+TGG - chr2_4:43490308-43490327 None:intergenic 40.0%
! CCAGTGTTATTACCAAGGAA+AGG + chr2_4:43490305-43490324 Msa0329630:intron 40.0%
TAAGTTTGTGTGCCTTTCCT+TGG - chr2_4:43490320-43490339 None:intergenic 40.0%
ATGGCATATAGAGAGGAGTA+GGG - chr2_4:43490380-43490399 None:intergenic 40.0%
TATGGCATATAGAGAGGAGT+AGG - chr2_4:43490381-43490400 None:intergenic 40.0%
CCTAAGAAGTTGTATACCCT+AGG - chr2_4:43490497-43490516 None:intergenic 40.0%
CCTAGGGTATACAACTTCTT+AGG + chr2_4:43490494-43490513 Msa0329630:intron 40.0%
CTGTACCATAGTGTATCCAA+GGG + chr2_4:43490737-43490756 Msa0329630:intron 40.0%
ATGACATGTATCAACTCCCT+TGG - chr2_4:43490756-43490775 None:intergenic 40.0%
! ACGTGTCTGTTTCTCAAATC+TGG - chr2_4:43490810-43490829 None:intergenic 40.0%
AACAGACACGTTAGAGCTAA+TGG + chr2_4:43490819-43490838 Msa0329630:intron 40.0%
ACAGACACGTTAGAGCTAAT+GGG + chr2_4:43490820-43490839 Msa0329630:intron 40.0%
AATTCGCACGTTAATGTGTC+TGG - chr2_4:43490846-43490865 None:intergenic 40.0%
TGACTTTCGTGAGAAAAGGA+GGG - chr2_4:43490886-43490905 None:intergenic 40.0%
TTGACTTTCGTGAGAAAAGG+AGG - chr2_4:43490887-43490906 None:intergenic 40.0%
TTTCCCTTGTTGGAGAAAGA+GGG - chr2_4:43490965-43490984 None:intergenic 40.0%
ATTTCCCTTGTTGGAGAAAG+AGG - chr2_4:43490966-43490985 None:intergenic 40.0%
AGTTAGGACTTCAAAACGAC+AGG + chr2_4:43491126-43491145 Msa0329630:intron 40.0%
GTTAGGACTTCAAAACGACA+GGG + chr2_4:43491127-43491146 Msa0329630:intron 40.0%
! CTGTTTTCCATGTTGAAGAG+GGG + chr2_4:43491221-43491240 Msa0329630:intron 40.0%
TTATTGAGGCGTAAAGTGGT+TGG + chr2_4:43491462-43491481 Msa0329630:intron 40.0%
TTACTTGACATGAGAGCAGA+AGG + chr2_4:43491528-43491547 Msa0329630:intron 40.0%
!! GGTGTCATTAAACATGCTAG+CGG + chr2_4:43491666-43491685 Msa0329630:intron 40.0%
! GTGTCATTAAACATGCTAGC+GGG + chr2_4:43491667-43491686 Msa0329630:intron 40.0%
GGAATGTTGTCTCGTTGTAT+TGG + chr2_4:43491707-43491726 Msa0329630:intron 40.0%
!!! GTTTTTTCAGACACCGGAAA+TGG + chr2_4:43491891-43491910 Msa0329630:intron 40.0%
GAAAAACTCTCTGCCAACAA+TGG + chr2_4:43491919-43491938 Msa0329630:intron 40.0%
ATTAGATTGCTGGCCATTGT+TGG - chr2_4:43491935-43491954 None:intergenic 40.0%
TGTCTCGACTATTAGATTGC+TGG - chr2_4:43491945-43491964 None:intergenic 40.0%
!! GCTTGTTAGCTAGTCTTACA+AGG + chr2_4:43492112-43492131 Msa0329630:intron 40.0%
TCTTCATCATCATGCTCCAA+CGG - chr2_4:43492255-43492274 None:intergenic 40.0%
GATGAAGATGCTAGAGCAAA+AGG + chr2_4:43492267-43492286 Msa0329630:CDS 40.0%
GAGATGTTAGAGCCAAATGA+AGG + chr2_4:43492320-43492339 Msa0329630:three_prime_UTR 40.0%
CTACTGCCTTTCAAAATAGC+TGG - chr2_4:43492501-43492520 None:intergenic 40.0%
AAAAGCCAGATATCCTAACC+CGG - chr2_4:43492542-43492561 None:intergenic 40.0%
! GTTAGGTTTTGCGTGTTGTG+TGG - chr2_4:43487737-43487756 None:intergenic 45.0%
! TGGAGGAGGGTTTGTTTGTT+AGG - chr2_4:43487754-43487773 None:intergenic 45.0%
TGTCAAACTGGAATTAGCGG+CGG - chr2_4:43487784-43487803 None:intergenic 45.0%
! AGGGTTTGTAAGGTTTTGCG+TGG - chr2_4:43487958-43487977 None:intergenic 45.0%
CGCTAATTCCAGTTCGACAA+TGG + chr2_4:43487995-43488014 Msa0329630:CDS 45.0%
TACAGGCATATCCAACCAAC+AGG + chr2_4:43488081-43488100 Msa0329630:CDS 45.0%
ACAGGCATATCCAACCAACA+GGG + chr2_4:43488082-43488101 Msa0329630:CDS 45.0%
! GATTTTCGACGAAGAAGCCT+TGG + chr2_4:43488364-43488383 Msa0329630:CDS 45.0%
TTGCTTTGCCTTTGCTGGAT+TGG + chr2_4:43488729-43488748 Msa0329630:intron 45.0%
ACTTACTTCAAAGTTGGCGG+CGG - chr2_4:43488824-43488843 None:intergenic 45.0%
CGACAGTGATGTTAAGCCAA+TGG - chr2_4:43489124-43489143 None:intergenic 45.0%
GGCTTAACATCACTGTCGTT+TGG + chr2_4:43489126-43489145 Msa0329630:intron 45.0%
GCACAACAGCTAAGATGCAT+TGG - chr2_4:43489504-43489523 None:intergenic 45.0%
TGCATCTTAGCTGTTGTGCA+AGG + chr2_4:43489505-43489524 Msa0329630:intron 45.0%
GCATCGGATAAAATGGAGGA+AGG - chr2_4:43489992-43490011 None:intergenic 45.0%
!! TCTGTGGGCATCGGATAAAA+TGG - chr2_4:43489999-43490018 None:intergenic 45.0%
CTATAGGAGCTTTGCTCTGT+GGG - chr2_4:43490014-43490033 None:intergenic 45.0%
ACTATAGGAGCTTTGCTCTG+TGG - chr2_4:43490015-43490034 None:intergenic 45.0%
ACAGAGCAAAGCTCCTATAG+TGG + chr2_4:43490014-43490033 Msa0329630:intron 45.0%
TAGGGATGTGAGGAAAGAGT+GGG - chr2_4:43490051-43490070 None:intergenic 45.0%
ATAGGGATGTGAGGAAAGAG+TGG - chr2_4:43490052-43490071 None:intergenic 45.0%
TCCAAACCCATTATGTGGCA+GGG - chr2_4:43490114-43490133 None:intergenic 45.0%
AGGGCCATAAAGGAGAATCT+GGG - chr2_4:43490168-43490187 None:intergenic 45.0%
TAGGGCCATAAAGGAGAATC+TGG - chr2_4:43490169-43490188 None:intergenic 45.0%
CTCCGTAGAAAACCTCTTTG+AGG + chr2_4:43490226-43490245 Msa0329630:intron 45.0%
CATGTTGTCCACAAGCAGAA+AGG - chr2_4:43490674-43490693 None:intergenic 45.0%
CTTTCTGCTTGTGGACAACA+TGG + chr2_4:43490672-43490691 Msa0329630:intron 45.0%
GCTGTACCATAGTGTATCCA+AGG + chr2_4:43490736-43490755 Msa0329630:intron 45.0%
CAACTCCCTTGGATACACTA+TGG - chr2_4:43490745-43490764 None:intergenic 45.0%
CATGTCATTACCTGTGTAGG+TGG + chr2_4:43490768-43490787 Msa0329630:intron 45.0%
AAGACTAATGCCACCTACAC+AGG - chr2_4:43490781-43490800 None:intergenic 45.0%
TCTGTAGTTGAGTAAGGTGC+TGG + chr2_4:43490908-43490927 Msa0329630:intron 45.0%
TTCCCTTGTTGGAGAAAGAG+GGG - chr2_4:43490964-43490983 None:intergenic 45.0%
CGTCGAAACATTTCCCTTGT+TGG - chr2_4:43490975-43490994 None:intergenic 45.0%
GAAATGTTTCGACGTTCTCG+CGG + chr2_4:43490981-43491000 Msa0329630:intron 45.0%
AAATGTTTCGACGTTCTCGC+GGG + chr2_4:43490982-43491001 Msa0329630:intron 45.0%
!!! CTGGGGACGATTTTGATTCA+AGG - chr2_4:43491371-43491390 None:intergenic 45.0%
CGGGTTCATGTTCTAGCATT+TGG + chr2_4:43491686-43491705 Msa0329630:intron 45.0%
!! GTACAAAAGTGTCCTAGCCA+CGG - chr2_4:43491747-43491766 None:intergenic 45.0%
TTCAGACACCGGAAATGGAA+AGG + chr2_4:43491896-43491915 Msa0329630:intron 45.0%
TCAGACACCGGAAATGGAAA+GGG + chr2_4:43491897-43491916 Msa0329630:intron 45.0%
ACAAGCACATGCATCCATGT+GGG - chr2_4:43492098-43492117 None:intergenic 45.0%
AACAAGCACATGCATCCATG+TGG - chr2_4:43492099-43492118 None:intergenic 45.0%
TAATAGTCGAGATCCGGGTT+AGG + chr2_4:43492526-43492545 Msa0329630:three_prime_UTR 45.0%
!!! AGGATATCTGGCTTTTACGC+CGG + chr2_4:43492546-43492565 Msa0329630:three_prime_UTR 45.0%
TGTCGAACTGGAATTAGCGG+CGG - chr2_4:43487994-43488013 None:intergenic 50.0%
AAACCCTCATCCACCACAAC+CGG + chr2_4:43488148-43488167 Msa0329630:CDS 50.0%
!! AAAATGGGATTAGCGTCGGC+CGG - chr2_4:43488170-43488189 None:intergenic 50.0%
! CGTGAGTTGAAGAGGCTTAG+TGG + chr2_4:43488287-43488306 Msa0329630:CDS 50.0%
!! AGAAGCATCGGATCACCATC+AGG - chr2_4:43488494-43488513 None:intergenic 50.0%
!! GTTATGGGCTGGTGTGTGTT+AGG + chr2_4:43488923-43488942 Msa0329630:intron 50.0%
CATTGGGTGCGTGTTTGTCT+TGG + chr2_4:43489050-43489069 Msa0329630:intron 50.0%
TTGCTAAGTAGGAACCGGCT+AGG + chr2_4:43489202-43489221 Msa0329630:intron 50.0%
TGCTAAGTAGGAACCGGCTA+GGG + chr2_4:43489203-43489222 Msa0329630:intron 50.0%
TGCAGAGGCAGTTCTTTGTC+TGG - chr2_4:43489317-43489336 None:intergenic 50.0%
!! GTGGGCATCGGATAAAATGG+AGG - chr2_4:43489996-43490015 None:intergenic 50.0%
GATGTGAGGAAAGAGTGGGA+GGG - chr2_4:43490047-43490066 None:intergenic 50.0%
CATTATGTGGCAGGGAGTGA+GGG - chr2_4:43490106-43490125 None:intergenic 50.0%
CTCACTCCCTGCCACATAAT+GGG + chr2_4:43490105-43490124 Msa0329630:intron 50.0%
!! TCCCTGCCACATAATGGGTT+TGG + chr2_4:43490110-43490129 Msa0329630:intron 50.0%
GTCCAAACCCATTATGTGGC+AGG - chr2_4:43490115-43490134 None:intergenic 50.0%
TGGGCCCAGATTCTCCTTTA+TGG + chr2_4:43490161-43490180 Msa0329630:intron 50.0%
TACGGAGACGATATCCAGTC+AGG - chr2_4:43490213-43490232 None:intergenic 50.0%
! TGGAAGGTACGTCCTCAAAG+AGG - chr2_4:43490241-43490260 None:intergenic 50.0%
AGGAGGGCAAGGAGCAAATT+TGG - chr2_4:43490870-43490889 None:intergenic 50.0%
TTCGTGAGAAAAGGAGGGCA+AGG - chr2_4:43490881-43490900 None:intergenic 50.0%
TGGAGCATGGGTATTTGGCA+CGG - chr2_4:43490939-43490958 None:intergenic 50.0%
TTGTTGGAGAAAGAGGGGAG+TGG - chr2_4:43490959-43490978 None:intergenic 50.0%
ACTCCCCTCTTTCTCCAACA+AGG + chr2_4:43490958-43490977 Msa0329630:intron 50.0%
CTCCCCTCTTTCTCCAACAA+GGG + chr2_4:43490959-43490978 Msa0329630:intron 50.0%
CTGCAATCCCCTCTTCAACA+TGG - chr2_4:43491231-43491250 None:intergenic 50.0%
TGGAAGAAATCTTGCGTCCG+TGG + chr2_4:43491727-43491746 Msa0329630:intron 50.0%
! AGGTGATGATGCTGTGATGC+TGG + chr2_4:43492287-43492306 Msa0329630:CDS 50.0%
! GAGATCCGGGTTAGGATATC+TGG + chr2_4:43492534-43492553 Msa0329630:three_prime_UTR 50.0%
GAGAATCAAACCCGGATCTC+CGG - chr2_4:43492568-43492587 None:intergenic 50.0%
GGAGATCCGGGTTTGATTCT+CGG + chr2_4:43492567-43492586 Msa0329630:three_prime_UTR 50.0%
CCATTGCCGAGAATCAAACC+CGG - chr2_4:43492576-43492595 None:intergenic 50.0%
AAACTGGAATTAGCGGCGGC+TGG - chr2_4:43487780-43487799 None:intergenic 55.0%
TCGTGGCTTGAACGCAATCC+TGG + chr2_4:43488623-43488642 Msa0329630:CDS 55.0%
GCTAAGTAGGAACCGGCTAG+GGG + chr2_4:43489204-43489223 Msa0329630:intron 55.0%
CTAAGTAGGAACCGGCTAGG+GGG + chr2_4:43489205-43489224 Msa0329630:intron 55.0%
GAGCTTTGCTCTGTGGGCAT+CGG - chr2_4:43490008-43490027 None:intergenic 55.0%
!! GGAGGGTGTCTTGCCACTAT+AGG - chr2_4:43490030-43490049 None:intergenic 55.0%
GGATGTGAGGAAAGAGTGGG+AGG - chr2_4:43490048-43490067 None:intergenic 55.0%
CCATTATGTGGCAGGGAGTG+AGG - chr2_4:43490107-43490126 None:intergenic 55.0%
CCTCACTCCCTGCCACATAA+TGG + chr2_4:43490104-43490123 Msa0329630:intron 55.0%
GCATGGGTATTTGGCACGGT+GGG - chr2_4:43490935-43490954 None:intergenic 55.0%
AGCATGGGTATTTGGCACGG+TGG - chr2_4:43490936-43490955 None:intergenic 55.0%
GGGAGTGGAGCATGGGTATT+TGG - chr2_4:43490944-43490963 None:intergenic 55.0%
GAAAGAGGGGAGTGGAGCAT+GGG - chr2_4:43490951-43490970 None:intergenic 55.0%
AGAAAGAGGGGAGTGGAGCA+TGG - chr2_4:43490952-43490971 None:intergenic 55.0%
GAAATCTTGCGTCCGTGGCT+AGG + chr2_4:43491732-43491751 Msa0329630:intron 55.0%
!! GGTTCTGATGGGTTTGCCGT+TGG + chr2_4:43492236-43492255 Msa0329630:intron 55.0%
! TGGCTTTTACGCCGGAGATC+CGG + chr2_4:43492554-43492573 Msa0329630:three_prime_UTR 55.0%
CCGGGTTTGATTCTCGGCAA+TGG + chr2_4:43492573-43492592 Msa0329630:three_prime_UTR 55.0%
GCGGTGGAGGAGGGTTTGTA+AGG - chr2_4:43487968-43487987 None:intergenic 60.0%
TACAAACCCTCCTCCACCGC+CGG + chr2_4:43487968-43487987 Msa0329630:CDS 60.0%
GAACTGGAATTAGCGGCGGC+CGG - chr2_4:43487990-43488009 None:intergenic 60.0%
! GCAGGGAGTGAGGGAGCATA+TGG - chr2_4:43490097-43490116 None:intergenic 60.0%
! GGCTTTTACGCCGGAGATCC+GGG + chr2_4:43492555-43492574 Msa0329630:three_prime_UTR 60.0%
CTGGAATTAGCGGCGGCTGG+CGG - chr2_4:43487777-43487796 None:intergenic 65.0%
!! CGGCCGGTTGTGGTGGATGA+GGG - chr2_4:43488154-43488173 None:intergenic 65.0%
!! TCGGCCGGTTGTGGTGGATG+AGG - chr2_4:43488155-43488174 None:intergenic 65.0%
!! TTAGCGTCGGCCGGTTGTGG+TGG - chr2_4:43488161-43488180 None:intergenic 65.0%
!! GGATTAGCGTCGGCCGGTTG+TGG - chr2_4:43488164-43488183 None:intergenic 65.0%
TAGGAACCGGCTAGGGGGAG+AGG + chr2_4:43489210-43489229 Msa0329630:intron 65.0%
AGGAACCGGCTAGGGGGAGA+GGG + chr2_4:43489211-43489230 Msa0329630:intron 65.0%
GTCTTCCCTCTCCCCCTAGC+CGG - chr2_4:43489219-43489238 None:intergenic 65.0%
GAATTAGCGGCGGCTGGCGG+TGG - chr2_4:43487774-43487793 None:intergenic 70.0%
CTGGAATTAGCGGCGGCCGG+CGG - chr2_4:43487987-43488006 None:intergenic 70.0%
TTAGCGGCGGCTGGCGGTGG+AGG - chr2_4:43487771-43487790 None:intergenic 75.0%
GAATTAGCGGCGGCCGGCGG+TGG - chr2_4:43487984-43488003 None:intergenic 75.0%
! CGGCGGCTGGCGGTGGAGGA+GGG - chr2_4:43487767-43487786 None:intergenic 80.0%
! TTAGCGGCGGCCGGCGGTGG+AGG - chr2_4:43487981-43488000 None:intergenic 80.0%
! GCGGCGGCTGGCGGTGGAGG+AGG - chr2_4:43487768-43487787 None:intergenic 85.0%
! CGGCGGCCGGCGGTGGAGGA+GGG - chr2_4:43487977-43487996 None:intergenic 85.0%
! GCGGCGGCCGGCGGTGGAGG+AGG - chr2_4:43487978-43487997 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43487695 43492698 43487695 ID=Msa0329630;Name=Msa0329630
chr2_4 mRNA 43487695 43492698 43487695 ID=Msa0329630-mRNA-1;Parent=Msa0329630;Name=Msa0329630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=109|0.5|1|1|1|1|3|384|337
chr2_4 exon 43487695 43488700 43487695 ID=Msa0329630-mRNA-1:exon:13243;Parent=Msa0329630-mRNA-1
chr2_4 exon 43488799 43488837 43488799 ID=Msa0329630-mRNA-1:exon:13244;Parent=Msa0329630-mRNA-1
chr2_4 exon 43492237 43492698 43492237 ID=Msa0329630-mRNA-1:exon:13245;Parent=Msa0329630-mRNA-1
chr2_4 five_prime_UTR 43487695 43487803 43487695 ID=Msa0329630-mRNA-1:five_prime_utr;Parent=Msa0329630-mRNA-1
chr2_4 CDS 43487804 43488700 43487804 ID=Msa0329630-mRNA-1:cds;Parent=Msa0329630-mRNA-1
chr2_4 CDS 43488799 43488837 43488799 ID=Msa0329630-mRNA-1:cds;Parent=Msa0329630-mRNA-1
chr2_4 CDS 43492237 43492314 43492237 ID=Msa0329630-mRNA-1:cds;Parent=Msa0329630-mRNA-1
chr2_4 three_prime_UTR 43492315 43492698 43492315 ID=Msa0329630-mRNA-1:three_prime_utr;Parent=Msa0329630-mRNA-1
Gene Sequence

>Msa0329630

ATGGTTGATTCGGCAAATCGTGACGCCATACTCCAAATCGAAAGTCGTATCGATAAATTAATGGAAGATCCAACCAACAATGAACAAGGTATTCGTGAGTTGAAGAGTCTTCGTGAAATTCTTCTTAATCTTAACAAAGAAGATGTCGAATCCACGCAAAACCTTACAAACCCTCCTCCACCGCCGGCCGCCGCTAATTCCAGTTCGACAATGGTTGATTTTTCTAAGAGCGACGTCATAGACATAATCGAAAGTCGTATCGATCGTATCTATCAACTACAGGCATATCCAACCAACAGGGAACAAATTATTAGTGAGTTGGAGAATCTTATTAAAATTCTTACAAACCCTCATCCACCACAACCGGCCGACGCTAATCCCATTTTGACAATGGTTGATTCGGCAAATCGCGACGCCATACTCCAAATCGAAAGTCGTATCGATAAACTAAAGGAGGATCCAACCACCAACAAAGAAGTTATTCGTGAGTTGAAGAGGCTTAGTGGAATTTTTCTTCGTCTTTACGAAGAAGATGTCGACGTAGAAAGAAGCAAAACGATGATTTTCGACGAAGAAGCCTTGGAAAAGATGATTGAGAAAACTTGTGTCGTTGGTGCTATTGTCAACTTGCTTTCCTTTGCTTCACCAGAACATAGTTTGTTTAATCCAGATATGCTTTTTATCTTTCCTGATGGTGATCCGATGCTTCTTCTTACTAAAAATGATTTGGACTCTATCCATCAATTTGTTTCGAAACCTGATGATTACAGAAATCTGGAAATTATGCACGCTATTTCGTCATTCTGTATCAATGCTAAGTCGTGGCTTGAACGCAATCCTGGTGTTAATGATTTGAGTGTCAGCTTGAATAAGATCATTCATGCAATCGACAATGCTGAGGATAAACTCAAGAAAGATGCCGCCGCCAACTTTGAAGTTCTGATGGGTTTGCCGTTGGAGCATGATGATGAAGATGCTAGAGCAAAAGGTGATGATGCTGTGATGCTGGAGTAA
Protein sequence

>Msa0329630

MVDSANRDAILQIESRIDKLMEDPTNNEQGIRELKSLREILLNLNKEDVESTQNLTNPPPPPAAANSSSTMVDFSKSDVIDIIESRIDRIYQLQAYPTNREQIISELENLIKILTNPHPPQPADANPILTMVDSANRDAILQIESRIDKLKEDPTTNKEVIRELKRLSGIFLRLYEEDVDVERSKTMIFDEEALEKMIEKTCVVGAIVNLLSFASPEHSLFNPDMLFIFPDGDPMLLLTKNDLDSIHQFVSKPDDYRNLEIMHAISSFCINAKSWLERNPGVNDLSVSLNKIIHAIDNAEDKLKKDAAANFEVLMGLPLEHDDEDARAKGDDAVMLE*