Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335140 | XP_003596691.1 | 98.280 | 465 | 6 | 1 | 1 | 465 | 1 | 463 | 0.0 | 940 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335140 | sp|Q5XF06|TI442_ARATH | 52.381 | 483 | 198 | 5 | 1 | 465 | 1 | 469 | 1.05e-173 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0311860 | Msa0335140 | 0.810147 | 1.331926e-50 | -8.615850e-47 |
| Msa0335140 | Msa0568820 | 0.809761 | 1.612989e-50 | -8.615850e-47 |
| Msa0335140 | Msa0619070 | 0.806109 | 9.646947e-50 | -8.615850e-47 |
| Msa0335140 | Msa0638280 | 0.810899 | 9.163310e-51 | -8.615850e-47 |
| Msa0335140 | Msa0638320 | 0.805672 | 1.192115e-49 | -8.615850e-47 |
| Msa0335140 | Msa0677270 | 0.812380 | 4.364940e-51 | -8.615850e-47 |
| Msa0335140 | Msa0750350 | 0.807485 | 4.939207e-50 | -8.615850e-47 |
| Msa0335140 | Msa0860080 | 0.812911 | 3.339829e-51 | -8.615850e-47 |
| Msa0335140 | Msa1037700 | -0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0335140 | Msa1130210 | -0.800360 | 1.495110e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335140 | MtrunA17_Chr2g0319891 | 98.280 | 465 | 6 | 1 | 1 | 465 | 1 | 463 | 0.0 | 940 |
| Msa0335140 | MtrunA17_Chr4g0038661 | 76.271 | 472 | 92 | 3 | 1 | 465 | 1 | 459 | 0.0 | 694 |
| Msa0335140 | MtrunA17_Chr4g0013321 | 76.642 | 274 | 55 | 4 | 192 | 465 | 1 | 265 | 4.55e-153 | 435 |
| Msa0335140 | MtrunA17_Chr4g0013311 | 80.909 | 110 | 11 | 3 | 1 | 101 | 44 | 152 | 4.21e-48 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0335140 | AT2G36070.1 | 52.381 | 483 | 198 | 5 | 1 | 465 | 1 | 469 | 1.07e-174 | 498 |
| Msa0335140 | AT2G20510.1 | 51.134 | 485 | 204 | 7 | 1 | 465 | 1 | 472 | 5.34e-167 | 479 |
| Msa0335140 | AT2G20510.3 | 50.924 | 487 | 204 | 7 | 1 | 465 | 1 | 474 | 1.35e-166 | 478 |
| Msa0335140 | AT2G20510.2 | 50.924 | 487 | 204 | 7 | 1 | 465 | 36 | 509 | 4.37e-166 | 478 |
| Msa0335140 | AT2G20510.4 | 48.687 | 419 | 182 | 7 | 1 | 399 | 1 | 406 | 1.50e-128 | 379 |
Find 95 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCCTAAAACGGGAAAA+AGG | 0.231655 | 2_4:-54204692 | None:intergenic |
| TAGTATGTCATAACCTTTCT+TGG | 0.248467 | 2_4:-54200944 | None:intergenic |
| TCCTGGCTCTTTGTCTTCAC+TGG | 0.270591 | 2_4:-54201237 | None:intergenic |
| TGCACTTCTGCCGCAAATTC+TGG | 0.273393 | 2_4:-54202379 | None:intergenic |
| CTCTAGCTTTGTCCCATAAA+TGG | 0.274818 | 2_4:+54204896 | Msa0335140:three_prime_UTR |
| AATTTAATTTGTCAGAAATA+TGG | 0.275490 | 2_4:+54198017 | Msa0335140:exon |
| TCAGTTCCTTCACAGACTTT+TGG | 0.303429 | 2_4:-54199599 | None:intergenic |
| AGTTTCATCTTTAACTTTGT+TGG | 0.315266 | 2_4:-54198232 | None:intergenic |
| TGGAAGGAAGTAGAAACTTT+TGG | 0.342970 | 2_4:-54200889 | None:intergenic |
| GTAAGAAGTTTGATGAGATC+AGG | 0.349212 | 2_4:+54201082 | Msa0335140:CDS |
| CATTGCCAGAAGCAGATTCC+TGG | 0.350512 | 2_4:-54200822 | None:intergenic |
| ATAGGAAAGCAGGACTCTTC+AGG | 0.369904 | 2_4:+54200724 | Msa0335140:CDS |
| AATGCTTCAGAGTCATTGTT+TGG | 0.375668 | 2_4:+54200841 | Msa0335140:CDS |
| GAACGAACAGGCTGTCTCTT+AGG | 0.376272 | 2_4:-54200991 | None:intergenic |
| TTATGCCCTCTAACCAATCT+TGG | 0.385672 | 2_4:+54201055 | Msa0335140:CDS |
| AACTGATTCTTCAACAAAAC+AGG | 0.388864 | 2_4:+54200750 | Msa0335140:CDS |
| TCTATGGGCTTTACAACAAA+TGG | 0.393561 | 2_4:+54204576 | Msa0335140:CDS |
| ACTTCTTACTCCACCAAGAT+TGG | 0.395217 | 2_4:-54201068 | None:intergenic |
| GCAGATGGTAGATGACTTGC+GGG | 0.402882 | 2_4:+54201405 | Msa0335140:intron |
| AAATCTATTGTGTACGTGAT+AGG | 0.408003 | 2_4:+54203865 | Msa0335140:CDS |
| AATTATACAAATCCCTAAAA+CGG | 0.414446 | 2_4:-54204700 | None:intergenic |
| CCTGGCTCTTTGTCTTCACT+GGG | 0.416200 | 2_4:-54201236 | None:intergenic |
| ACTCCACCAAGATTGGTTAG+AGG | 0.418917 | 2_4:-54201061 | None:intergenic |
| TCTTATTCTTCCTCAACAAC+AGG | 0.419689 | 2_4:+54198083 | Msa0335140:CDS |
| AGATGCTGCACTTGCACATA+AGG | 0.420534 | 2_4:+54202226 | Msa0335140:CDS |
| TGGAGATGATTCCAACATCT+TGG | 0.430011 | 2_4:-54203706 | None:intergenic |
| ATTGTGTACGTGATAGGAAT+GGG | 0.437176 | 2_4:+54203871 | Msa0335140:CDS |
| TTTGTACTTGTTTCGCCGCT+AGG | 0.438308 | 2_4:-54201018 | None:intergenic |
| CAAATGGAAGATGGAGATCA+TGG | 0.444391 | 2_4:+54204592 | Msa0335140:CDS |
| ATTATACAAATCCCTAAAAC+GGG | 0.449416 | 2_4:-54204699 | None:intergenic |
| CCCAGTGAAGACAAAGAGCC+AGG | 0.453404 | 2_4:+54201236 | Msa0335140:CDS |
| CAGCTGTACAAACAATTTGA+TGG | 0.453548 | 2_4:+54199830 | Msa0335140:CDS |
| ACATAAGGAAATACATCAAC+GGG | 0.455512 | 2_4:+54202241 | Msa0335140:CDS |
| GTTTGATGAGATCAGGGATA+AGG | 0.462303 | 2_4:+54201089 | Msa0335140:CDS |
| AGCTGAAGCTGCTGCAAAGA+AGG | 0.464214 | 2_4:+54199865 | Msa0335140:CDS |
| CCCCATTATTAACAAAATAC+AGG | 0.478939 | 2_4:+54201450 | Msa0335140:CDS |
| AGTATATTTAAAGAAACGCT+TGG | 0.488705 | 2_4:-54201211 | None:intergenic |
| GAAAATTTCAGCTGCAACTG+AGG | 0.491973 | 2_4:+54200613 | Msa0335140:CDS |
| AGAATTTGCGGCAGAAGTGC+AGG | 0.492301 | 2_4:+54202381 | Msa0335140:CDS |
| CCGCTAGGAGTGGAACGAAC+AGG | 0.492550 | 2_4:-54201003 | None:intergenic |
| ATTGTGGACATGACCAAGAA+AGG | 0.502159 | 2_4:+54200931 | Msa0335140:CDS |
| TAAGAAGTTTGATGAGATCA+GGG | 0.510559 | 2_4:+54201083 | Msa0335140:CDS |
| CTCCACCAAGATTGGTTAGA+GGG | 0.517055 | 2_4:-54201060 | None:intergenic |
| AATTAGGTGAAAGTTGGGAT+AGG | 0.518868 | 2_4:+54200706 | Msa0335140:intron |
| AGTAGTAGTAGTTAAAGTAG+AGG | 0.519102 | 2_4:-54197914 | None:intergenic |
| TTAAAGAAACGCTTGGACGC+AGG | 0.520248 | 2_4:-54201204 | None:intergenic |
| TATTGTGTACGTGATAGGAA+TGG | 0.523074 | 2_4:+54203870 | Msa0335140:CDS |
| AGTAGTAGTTAAAGTAGAGG+AGG | 0.524054 | 2_4:-54197911 | None:intergenic |
| ACTTGTTTCGCCGCTAGGAG+TGG | 0.526493 | 2_4:-54201013 | None:intergenic |
| TTCTGCCGCAAATTCTGGTA+AGG | 0.527388 | 2_4:-54202374 | None:intergenic |
| TGCCCTCTAACCAATCTTGG+TGG | 0.535468 | 2_4:+54201058 | Msa0335140:CDS |
| GAAAGTTGGGATAGGAAAGC+AGG | 0.537129 | 2_4:+54200714 | Msa0335140:CDS |
| TTGATGTAAGCATTAAGCAC+TGG | 0.537651 | 2_4:-54202415 | None:intergenic |
| TGGTATCTTCTTTGATAACA+AGG | 0.547596 | 2_4:+54203480 | Msa0335140:CDS |
| AATACCACTACAATAATGAC+TGG | 0.548970 | 2_4:-54203726 | None:intergenic |
| AGTGCTTAATGCTTACATCA+AGG | 0.552186 | 2_4:+54202417 | Msa0335140:CDS |
| ATGCTGATGCAAAGCAAGGA+AGG | 0.559676 | 2_4:+54200773 | Msa0335140:CDS |
| GAAAGGTTATGACATACTAA+AGG | 0.563965 | 2_4:+54200948 | Msa0335140:CDS |
| GAACTGAAAGGGGTAAAAGA+AGG | 0.566512 | 2_4:+54199636 | Msa0335140:CDS |
| TGTAAGAGAAGCCAAGATGT+TGG | 0.571880 | 2_4:+54203695 | Msa0335140:CDS |
| GGCAGATGGTAGATGACTTG+CGG | 0.577127 | 2_4:+54201404 | Msa0335140:intron |
| GGAAGATGGAGATCATGGAG+AGG | 0.577171 | 2_4:+54204597 | Msa0335140:CDS |
| GGCTTCTCTTACATCCGCGT+CGG | 0.577672 | 2_4:-54203685 | None:intergenic |
| GCTTTACAACAAATGGAAGA+TGG | 0.578657 | 2_4:+54204583 | Msa0335140:CDS |
| ATCTCCAGTCATTATTGTAG+TGG | 0.579699 | 2_4:+54203722 | Msa0335140:CDS |
| AAAGTCTGTGAAGGAACTGA+AGG | 0.580236 | 2_4:+54199602 | Msa0335140:CDS |
| CATGGTGCTTATAAAAGTCA+TGG | 0.586047 | 2_4:+54203460 | Msa0335140:CDS |
| CACATAAGGAAATACATCAA+CGG | 0.588929 | 2_4:+54202240 | Msa0335140:CDS |
| CATCCGCGTCGGATACATGC+AGG | 0.596517 | 2_4:-54203674 | None:intergenic |
| GATGAACGAACCTGTTGTTG+AGG | 0.611304 | 2_4:-54198093 | None:intergenic |
| AGAAACGCTTGGACGCAGGA+TGG | 0.615876 | 2_4:-54201200 | None:intergenic |
| GATGAATGAATGAAGTTAAG+CGG | 0.616853 | 2_4:-54197889 | None:intergenic |
| AATGGGGAAATTACAGAAGG+TGG | 0.619177 | 2_4:+54203888 | Msa0335140:CDS |
| AGGAATGGGGAAATTACAGA+AGG | 0.622573 | 2_4:+54203885 | Msa0335140:CDS |
| AGAATTCCAAAAGTCTGTGA+AGG | 0.623117 | 2_4:+54199593 | Msa0335140:CDS |
| CAGGATGCTGATGCAAAGCA+AGG | 0.623160 | 2_4:+54200769 | Msa0335140:CDS |
| GTGAAGACGATACGTAGATA+CGG | 0.628416 | 2_4:+54198192 | Msa0335140:CDS |
| CCCATAGATAAAATACTGTG+TGG | 0.632433 | 2_4:-54204561 | None:intergenic |
| ATACTAAAGGAGGAACTAAG+TGG | 0.632938 | 2_4:+54200961 | Msa0335140:CDS |
| GGAAATTACAGAAGGTGGCA+AGG | 0.634249 | 2_4:+54203893 | Msa0335140:CDS |
| AGGATGCTATTTACTATACG+TGG | 0.636022 | 2_4:+54204617 | Msa0335140:CDS |
| AATTTCAGCTGCAACTGAGG+AGG | 0.637912 | 2_4:+54200616 | Msa0335140:CDS |
| AAAAGCAGAAGAACTGAAAG+GGG | 0.638237 | 2_4:+54199626 | Msa0335140:CDS |
| TTGAGAGAGATGCAGCAGCA+AGG | 0.638316 | 2_4:+54204643 | Msa0335140:CDS |
| TTACAGCGTTCAATCAGCTG+AGG | 0.645906 | 2_4:-54203430 | None:intergenic |
| GAACGCTGTAAAGCAGAGCA+TGG | 0.646348 | 2_4:+54203442 | Msa0335140:CDS |
| AGGTTATGACATACTAAAGG+AGG | 0.647892 | 2_4:+54200951 | Msa0335140:CDS |
| ACAAACAATTTGATGGCGTG+TGG | 0.659143 | 2_4:+54199837 | Msa0335140:CDS |
| AGATGAGCTAGCTTGATGCA+TGG | 0.662212 | 2_4:+54204864 | Msa0335140:three_prime_UTR |
| AGGAAGGCAGACATCACCCG+AGG | 0.676721 | 2_4:+54200789 | Msa0335140:CDS |
| TTGTGTACGTGATAGGAATG+GGG | 0.681178 | 2_4:+54203872 | Msa0335140:CDS |
| ATTTGCGGCAGAAGTGCAGG+AGG | 0.685263 | 2_4:+54202384 | Msa0335140:CDS |
| AGTGAAGACAAAGAGCCAGG+AGG | 0.737566 | 2_4:+54201239 | Msa0335140:CDS |
| CCTGTTCGTTCCACTCCTAG+CGG | 0.754592 | 2_4:+54201003 | Msa0335140:CDS |
| GATCCTGCATGTATCCGACG+CGG | 0.788381 | 2_4:+54203671 | Msa0335140:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATAGATAATGAAA+GGG | - | chr2_4:54198133-54198152 | None:intergenic | 10.0% |
| !! | AATAATAAATAGATAATGAA+AGG | - | chr2_4:54198134-54198153 | None:intergenic | 10.0% |
| !!! | TTTATTGTTATTATTATTGT+AGG | + | chr2_4:54198167-54198186 | Msa0335140:intron | 10.0% |
| !!! | TTATTGTTATTATTATTGTA+GGG | + | chr2_4:54198168-54198187 | Msa0335140:intron | 10.0% |
| !!! | TTTTACATTTTTAATGAAAT+TGG | + | chr2_4:54201383-54201402 | Msa0335140:intron | 10.0% |
| !!! | AATTTAATTTGTCAGAAATA+TGG | + | chr2_4:54198017-54198036 | Msa0335140:exon | 15.0% |
| !! | AAGTTAAGTAAATTGATAAA+GGG | - | chr2_4:54198295-54198314 | None:intergenic | 15.0% |
| !!! | TATTTAATTTAACTAGTAAG+TGG | + | chr2_4:54198687-54198706 | Msa0335140:intron | 15.0% |
| !! | CTAATTATTGTAAATATGTT+TGG | + | chr2_4:54201516-54201535 | Msa0335140:intron | 15.0% |
| !! | TAATATATCATGTTACAATT+TGG | + | chr2_4:54203052-54203071 | Msa0335140:intron | 15.0% |
| !!! | TATTTATCTTGTTTATGAAT+TGG | + | chr2_4:54203353-54203372 | Msa0335140:intron | 15.0% |
| !! | AAAGACAATATGTAATTAAA+AGG | - | chr2_4:54203543-54203562 | None:intergenic | 15.0% |
| !!! | TTTTCATATTATGAATTTTG+AGG | + | chr2_4:54203935-54203954 | Msa0335140:intron | 15.0% |
| !!! | TGATTTTAAATATTTGAACA+AGG | - | chr2_4:54204027-54204046 | None:intergenic | 15.0% |
| !! | TTATTAAAAAAGTAACATGA+CGG | + | chr2_4:54204821-54204840 | Msa0335140:three_prime_UTR | 15.0% |
| !!! | TCAATACAAATTTTATGAAG+CGG | + | chr2_4:54197976-54197995 | Msa0335140:five_prime_UTR | 20.0% |
| !! | AGTTAAGTAAATTGATAAAG+GGG | - | chr2_4:54198294-54198313 | None:intergenic | 20.0% |
| !! | CAAGTTAAGTAAATTGATAA+AGG | - | chr2_4:54198296-54198315 | None:intergenic | 20.0% |
| !! | TAAATATAGTTGACAAATAG+TGG | - | chr2_4:54198673-54198692 | None:intergenic | 20.0% |
| !! | GATTTCTATTGTAATAAGTT+AGG | + | chr2_4:54199068-54199087 | Msa0335140:intron | 20.0% |
| !!! | TTTAAATAATGTTTTGTGCA+AGG | + | chr2_4:54199107-54199126 | Msa0335140:intron | 20.0% |
| !!! | TTAAATAATGTTTTGTGCAA+GGG | + | chr2_4:54199108-54199127 | Msa0335140:intron | 20.0% |
| !!! | TCCTCTTTTCAATAAAATTT+TGG | + | chr2_4:54199171-54199190 | Msa0335140:intron | 20.0% |
| !!! | ACCAAAATTTTATTGAAAAG+AGG | - | chr2_4:54199175-54199194 | None:intergenic | 20.0% |
| !!! | TTAGTAATTATATCTTTTGC+AGG | + | chr2_4:54200571-54200590 | Msa0335140:intron | 20.0% |
| !!! | ATTTTAAATTAGGTGAAAGT+TGG | + | chr2_4:54200700-54200719 | Msa0335140:intron | 20.0% |
| !!! | TTTTAAATTAGGTGAAAGTT+GGG | + | chr2_4:54200701-54200720 | Msa0335140:intron | 20.0% |
| !!! | TTTTTGCATCCTTTAATTTT+TGG | - | chr2_4:54200912-54200931 | None:intergenic | 20.0% |
| !!! | TCCTGTATTTTGTTAATAAT+GGG | - | chr2_4:54201454-54201473 | None:intergenic | 20.0% |
| !! | ATTTACAATAATTAGTGACT+TGG | - | chr2_4:54201511-54201530 | None:intergenic | 20.0% |
| !! | GAGATATAACTTCAAAAATT+TGG | + | chr2_4:54201594-54201613 | Msa0335140:intron | 20.0% |
| !! | ATTAGCATTAGAAAGTAAAT+AGG | + | chr2_4:54201772-54201791 | Msa0335140:intron | 20.0% |
| !! | AAAACTAAGACAAAAACAAA+AGG | - | chr2_4:54202284-54202303 | None:intergenic | 20.0% |
| !! | ATTGTAACATGATATATTAC+AGG | - | chr2_4:54203051-54203070 | None:intergenic | 20.0% |
| !! | CATAAATTTAAAAAGTCAAG+TGG | + | chr2_4:54203208-54203227 | Msa0335140:intron | 20.0% |
| !!! | CTTTTACTTGTAAACATATA+GGG | + | chr2_4:54203376-54203395 | Msa0335140:intron | 20.0% |
| !!! | TTATTTTTTCTCAACTTTCT+TGG | + | chr2_4:54203511-54203530 | Msa0335140:intron | 20.0% |
| !!! | ATTACATATTGTCTTTTAAC+AGG | + | chr2_4:54203547-54203566 | Msa0335140:intron | 20.0% |
| !! | TATGTGTTATATATGCTATA+TGG | - | chr2_4:54203589-54203608 | None:intergenic | 20.0% |
| !! | AAAATGTAACTATCAAATCT+TGG | - | chr2_4:54203628-54203647 | None:intergenic | 20.0% |
| !! | TATAAGACTATAAGTTTATG+AGG | + | chr2_4:54204269-54204288 | Msa0335140:intron | 20.0% |
| !! | ATAAGACTATAAGTTTATGA+GGG | + | chr2_4:54204270-54204289 | Msa0335140:intron | 20.0% |
| !! | AATTATACAAATCCCTAAAA+CGG | - | chr2_4:54204703-54204722 | None:intergenic | 20.0% |
| !!! | ACACATGTATTTCATTTTTT+GGG | + | chr2_4:54204736-54204755 | Msa0335140:three_prime_UTR | 20.0% |
| !!! | TTTATCTTTTTGCCATTTAT+GGG | - | chr2_4:54204911-54204930 | None:intergenic | 20.0% |
| !!! | TTTTATCTTTTTGCCATTTA+TGG | - | chr2_4:54204912-54204931 | None:intergenic | 20.0% |
| !! | TAAATGGCAAAAAGATAAAA+TGG | + | chr2_4:54204912-54204931 | Msa0335140:three_prime_UTR | 20.0% |
| !! | AGTTTCATCTTTAACTTTGT+TGG | - | chr2_4:54198235-54198254 | None:intergenic | 25.0% |
| ! | GTTAAGTAAATTGATAAAGG+GGG | - | chr2_4:54198293-54198312 | None:intergenic | 25.0% |
| ! | ATTAAGCTATTTATCCAAAC+AGG | + | chr2_4:54198343-54198362 | Msa0335140:intron | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+GGG | + | chr2_4:54198344-54198363 | Msa0335140:intron | 25.0% |
| ! | TAAAAATCAATTCTCCACTA+AGG | - | chr2_4:54198370-54198389 | None:intergenic | 25.0% |
| ! | TAGCAGATAGTACAAAATAA+TGG | + | chr2_4:54198602-54198621 | Msa0335140:intron | 25.0% |
| ! | TTAACTTATATTCTCACACT+AGG | + | chr2_4:54198812-54198831 | Msa0335140:intron | 25.0% |
| ! | TTGTACTAAACAGTGTATTA+CGG | + | chr2_4:54198953-54198972 | Msa0335140:intron | 25.0% |
| ! | AGAATTCAAAGAAGAAACAT+GGG | - | chr2_4:54199148-54199167 | None:intergenic | 25.0% |
| ! | AAGAATTCAAAGAAGAAACA+TGG | - | chr2_4:54199149-54199168 | None:intergenic | 25.0% |
| !!! | ATATATTTTTTGCTCAACGT+TGG | - | chr2_4:54199229-54199248 | None:intergenic | 25.0% |
| !!! | AGATACTTTCTAAAACAACT+TGG | + | chr2_4:54199264-54199283 | Msa0335140:intron | 25.0% |
| !! | GGATTTTTAATATACACGAT+AGG | + | chr2_4:54199285-54199304 | Msa0335140:intron | 25.0% |
| !!! | TTTTCTAGAAATTTCCTACT+CGG | + | chr2_4:54199356-54199375 | Msa0335140:intron | 25.0% |
| ! | AGTTTATCATCACTCAAAAT+TGG | + | chr2_4:54199908-54199927 | Msa0335140:intron | 25.0% |
| ! | TGATTCATGATTCAGAAAAT+CGG | - | chr2_4:54200094-54200113 | None:intergenic | 25.0% |
| ! | ATCTAATGTTGAAAGAAAAG+TGG | + | chr2_4:54200247-54200266 | Msa0335140:intron | 25.0% |
| ! | AGTTGACATAAAGAAATAGT+TGG | + | chr2_4:54200282-54200301 | Msa0335140:intron | 25.0% |
| ! | TCGAAACAAATCTTAGAATA+TGG | - | chr2_4:54200330-54200349 | None:intergenic | 25.0% |
| !!! | ATTCTAAGATTTGTTTCGAT+TGG | + | chr2_4:54200331-54200350 | Msa0335140:intron | 25.0% |
| ! | TAATAACACATGTATTCCTT+TGG | + | chr2_4:54200403-54200422 | Msa0335140:intron | 25.0% |
| !!! | TTTCCTTGTTATTGAACTTT+TGG | + | chr2_4:54200488-54200507 | Msa0335140:intron | 25.0% |
| !!! | TTGTTATTGAACTTTTGGTT+GGG | + | chr2_4:54200493-54200512 | Msa0335140:intron | 25.0% |
| !! | GAGATTCCTCATTTTAAATT+AGG | + | chr2_4:54200690-54200709 | Msa0335140:intron | 25.0% |
| !! | CTTTCACCTAATTTAAAATG+AGG | - | chr2_4:54200699-54200718 | None:intergenic | 25.0% |
| ! | TACTTCCTTCCAAAAATTAA+AGG | + | chr2_4:54200900-54200919 | Msa0335140:CDS | 25.0% |
| ! | ATTAAAGGATGCAAAAATTG+TGG | + | chr2_4:54200915-54200934 | Msa0335140:CDS | 25.0% |
| ! | ATTACATAAGACTTGTAACA+CGG | - | chr2_4:54201118-54201137 | None:intergenic | 25.0% |
| !! | TGTTACAAGTCTTATGTAAT+TGG | + | chr2_4:54201118-54201137 | Msa0335140:intron | 25.0% |
| ! | AGTATATTTAAAGAAACGCT+TGG | - | chr2_4:54201214-54201233 | None:intergenic | 25.0% |
| ! | TGATGTAGAATAAAAACATC+AGG | - | chr2_4:54201276-54201295 | None:intergenic | 25.0% |
| !! | ACTTTTGAATCACCTTTTAT+TGG | + | chr2_4:54201353-54201372 | Msa0335140:intron | 25.0% |
| ! | TAAAATACCAAGCCAATAAA+AGG | - | chr2_4:54201368-54201387 | None:intergenic | 25.0% |
| !! | TTTTTAATGAAATTGGCAGA+TGG | + | chr2_4:54201390-54201409 | Msa0335140:intron | 25.0% |
| !! | CCTGTATTTTGTTAATAATG+GGG | - | chr2_4:54201453-54201472 | None:intergenic | 25.0% |
| !! | CTCCTGTATTTTGTTAATAA+TGG | - | chr2_4:54201455-54201474 | None:intergenic | 25.0% |
| ! | AATATCTGTAGATACATCTT+CGG | + | chr2_4:54201565-54201584 | Msa0335140:intron | 25.0% |
| ! | ACACAACATAATGAAGAATA+AGG | - | chr2_4:54201639-54201658 | None:intergenic | 25.0% |
| ! | ATCAATGATTAGCATTAGAA+AGG | + | chr2_4:54201816-54201835 | Msa0335140:intron | 25.0% |
| ! | ATTAGCATTAGAAAGGAAAT+CGG | + | chr2_4:54201823-54201842 | Msa0335140:intron | 25.0% |
| !!! | TTGCTATCTTTTTTGTGAAT+AGG | + | chr2_4:54201981-54202000 | Msa0335140:intron | 25.0% |
| !!! | TGCTATCTTTTTTGTGAATA+GGG | + | chr2_4:54201982-54202001 | Msa0335140:intron | 25.0% |
| ! | AAAATCATACCAACATATCT+AGG | + | chr2_4:54202088-54202107 | Msa0335140:intron | 25.0% |
| !! | AGTTTTTCTATTCCTTTTCT+GGG | - | chr2_4:54202457-54202476 | None:intergenic | 25.0% |
| ! | AAAATATCAGTTCATGCTAA+TGG | - | chr2_4:54203174-54203193 | None:intergenic | 25.0% |
| ! | ATTTAAAAAGTCAAGTGGTT+TGG | + | chr2_4:54203213-54203232 | Msa0335140:intron | 25.0% |
| !! | GCTTTTACTTGTAAACATAT+AGG | + | chr2_4:54203375-54203394 | Msa0335140:intron | 25.0% |
| ! | TAAAATCATCAAATGTCATG+CGG | + | chr2_4:54204039-54204058 | Msa0335140:intron | 25.0% |
| !! | TCTATTTTACGGAAGATTAA+GGG | - | chr2_4:54204088-54204107 | None:intergenic | 25.0% |
| !! | TTCTATTTTACGGAAGATTA+AGG | - | chr2_4:54204089-54204108 | None:intergenic | 25.0% |
| ! | TTAATCTTCCGTAAAATAGA+AGG | + | chr2_4:54204088-54204107 | Msa0335140:intron | 25.0% |
| !!! | AGAAACTCTTTTCTAAGATT+TGG | - | chr2_4:54204348-54204367 | None:intergenic | 25.0% |
| ! | ATTATACAAATCCCTAAAAC+GGG | - | chr2_4:54204702-54204721 | None:intergenic | 25.0% |
| !!! | CACACATGTATTTCATTTTT+TGG | + | chr2_4:54204735-54204754 | Msa0335140:three_prime_UTR | 25.0% |
| !!! | CACATGTATTTCATTTTTTG+GGG | + | chr2_4:54204737-54204756 | Msa0335140:three_prime_UTR | 25.0% |
| GATGAATGAATGAAGTTAAG+CGG | - | chr2_4:54197892-54197911 | None:intergenic | 30.0% | |
| AGTAGTAGTAGTTAAAGTAG+AGG | - | chr2_4:54197917-54197936 | None:intergenic | 30.0% | |
| TTTACATTCACTACCACTAT+TGG | + | chr2_4:54198448-54198467 | Msa0335140:intron | 30.0% | |
| ! | CATGGGTTAATAAGTTCATT+TGG | - | chr2_4:54198482-54198501 | None:intergenic | 30.0% |
| ! | TAGTTTTCAGTAGGATGTTT+TGG | - | chr2_4:54198746-54198765 | None:intergenic | 30.0% |
| !!! | TTACTGGTTTAGTTTTCAGT+AGG | - | chr2_4:54198755-54198774 | None:intergenic | 30.0% |
| ! | CCAAAACTTGAGATTTTTAC+TGG | - | chr2_4:54198771-54198790 | None:intergenic | 30.0% |
| ! | CCAGTAAAAATCTCAAGTTT+TGG | + | chr2_4:54198768-54198787 | Msa0335140:intron | 30.0% |
| ACATTCAGGGATTCAATTTA+TGG | + | chr2_4:54198849-54198868 | Msa0335140:intron | 30.0% | |
| AATTCAAAGAAGAAACATGG+GGG | - | chr2_4:54199146-54199165 | None:intergenic | 30.0% | |
| GAATTCAAAGAAGAAACATG+GGG | - | chr2_4:54199147-54199166 | None:intergenic | 30.0% | |
| AGTCATGTAACTCAACTAAA+GGG | - | chr2_4:54199405-54199424 | None:intergenic | 30.0% | |
| TAGTCATGTAACTCAACTAA+AGG | - | chr2_4:54199406-54199425 | None:intergenic | 30.0% | |
| ! | TTTTTATGTCCTAGCATGAA+AGG | - | chr2_4:54199469-54199488 | None:intergenic | 30.0% |
| ! | CTCTGTTAAATTCTTGTTGT+TGG | + | chr2_4:54199555-54199574 | Msa0335140:intron | 30.0% |
| !! | TGTTAAATTCTTGTTGTTGG+TGG | + | chr2_4:54199558-54199577 | Msa0335140:intron | 30.0% |
| AAAAAGCAGAAGAACTGAAA+GGG | + | chr2_4:54199625-54199644 | Msa0335140:CDS | 30.0% | |
| !!! | GAAAAGTAAGTCTTGTTTTG+TGG | + | chr2_4:54199666-54199685 | Msa0335140:intron | 30.0% |
| CATCACTCAAAATTGGTTAT+TGG | + | chr2_4:54199915-54199934 | Msa0335140:intron | 30.0% | |
| GAAAATCGGTCTTCAATAAA+AGG | - | chr2_4:54200080-54200099 | None:intergenic | 30.0% | |
| CACAAATAAATAGCAACCAA+AGG | - | chr2_4:54200422-54200441 | None:intergenic | 30.0% | |
| CAACCAAAAGTTCAATAACA+AGG | - | chr2_4:54200494-54200513 | None:intergenic | 30.0% | |
| !!! | CTTGTTATTGAACTTTTGGT+TGG | + | chr2_4:54200492-54200511 | Msa0335140:intron | 30.0% |
| AAAATGTGATCCACAATTGA+TGG | + | chr2_4:54200661-54200680 | Msa0335140:intron | 30.0% | |
| ! | AACTGATTCTTCAACAAAAC+AGG | + | chr2_4:54200750-54200769 | Msa0335140:CDS | 30.0% |
| !! | TGCATCCTTTAATTTTTGGA+AGG | - | chr2_4:54200908-54200927 | None:intergenic | 30.0% |
| TAGTATGTCATAACCTTTCT+TGG | - | chr2_4:54200947-54200966 | None:intergenic | 30.0% | |
| GAAAGGTTATGACATACTAA+AGG | + | chr2_4:54200948-54200967 | Msa0335140:CDS | 30.0% | |
| TAAGAAGTTTGATGAGATCA+GGG | + | chr2_4:54201083-54201102 | Msa0335140:CDS | 30.0% | |
| AGGTAGAGAAGATATCTTAA+GGG | - | chr2_4:54201162-54201181 | None:intergenic | 30.0% | |
| AAGGTAGAGAAGATATCTTA+AGG | - | chr2_4:54201163-54201182 | None:intergenic | 30.0% | |
| ! | TCTTCTCTACCTTTTCATTT+AGG | + | chr2_4:54201170-54201189 | Msa0335140:intron | 30.0% |
| TCAGACCTCTTAAAAAATGT+TGG | + | chr2_4:54201293-54201312 | Msa0335140:intron | 30.0% | |
| !!! | CAACACCAACATTTTTTAAG+AGG | - | chr2_4:54201301-54201320 | None:intergenic | 30.0% |
| CTCTTAAAAAATGTTGGTGT+TGG | + | chr2_4:54201299-54201318 | Msa0335140:intron | 30.0% | |
| CCCCATTATTAACAAAATAC+AGG | + | chr2_4:54201450-54201469 | Msa0335140:CDS | 30.0% | |
| ! | TCATTATGTTGTGTGTTGAT+TGG | + | chr2_4:54201645-54201664 | Msa0335140:intron | 30.0% |
| AAAGTAAATAGGAAAGCTAC+TGG | + | chr2_4:54201783-54201802 | Msa0335140:intron | 30.0% | |
| TGACATTCTTAAATCAGTCA+TGG | + | chr2_4:54201873-54201892 | Msa0335140:intron | 30.0% | |
| !!! | GCTATCTTTTTTGTGAATAG+GGG | + | chr2_4:54201983-54202002 | Msa0335140:intron | 30.0% |
| TCAATGCTGATGTATGTATT+CGG | + | chr2_4:54202122-54202141 | Msa0335140:intron | 30.0% | |
| TTCGGATCATATCAACTATA+TGG | + | chr2_4:54202140-54202159 | Msa0335140:intron | 30.0% | |
| CACATAAGGAAATACATCAA+CGG | + | chr2_4:54202240-54202259 | Msa0335140:CDS | 30.0% | |
| ACATAAGGAAATACATCAAC+GGG | + | chr2_4:54202241-54202260 | Msa0335140:CDS | 30.0% | |
| ! | ATTTTCCTTACCAGAATTTG+CGG | + | chr2_4:54202369-54202388 | Msa0335140:CDS | 30.0% |
| TACATCAAGGTTAGTGATAT+AGG | + | chr2_4:54202430-54202449 | Msa0335140:intron | 30.0% | |
| ! | CAGTTTTTCTATTCCTTTTC+TGG | - | chr2_4:54202458-54202477 | None:intergenic | 30.0% |
| TGTAACACTAATTACTTCTC+TGG | - | chr2_4:54202509-54202528 | None:intergenic | 30.0% | |
| !! | AGTGTTACAGAGTAGTTTTA+AGG | + | chr2_4:54202520-54202539 | Msa0335140:intron | 30.0% |
| !!! | AGCATCTACACTTTATTTTC+AGG | + | chr2_4:54202562-54202581 | Msa0335140:intron | 30.0% |
| !!! | TACACTTTATTTTCAGGATC+AGG | + | chr2_4:54202568-54202587 | Msa0335140:intron | 30.0% |
| AAACCTGATTGGGAAAATAA+AGG | - | chr2_4:54202602-54202621 | None:intergenic | 30.0% | |
| TATCGTTTAGAAACCTGATT+GGG | - | chr2_4:54202612-54202631 | None:intergenic | 30.0% | |
| ATATCGTTTAGAAACCTGAT+TGG | - | chr2_4:54202613-54202632 | None:intergenic | 30.0% | |
| AAAAGTCAGTTTGTACGAAT+TGG | - | chr2_4:54202711-54202730 | None:intergenic | 30.0% | |
| !! | ATTCGTACAAACTGACTTTT+CGG | + | chr2_4:54202711-54202730 | Msa0335140:intron | 30.0% |
| TAATGAAGAGTTTATGGTTG+TGG | - | chr2_4:54202774-54202793 | None:intergenic | 30.0% | |
| TGCTTGTAATGAAGAGTTTA+TGG | - | chr2_4:54202780-54202799 | None:intergenic | 30.0% | |
| ! | ATATTTTCTCCAAGTCCAAT+AGG | + | chr2_4:54202809-54202828 | Msa0335140:intron | 30.0% |
| ! | AGGCTTTTGAATTTCTCAAA+GGG | - | chr2_4:54202944-54202963 | None:intergenic | 30.0% |
| TTATGATGATCGTTAGATGT+GGG | + | chr2_4:54203146-54203165 | Msa0335140:intron | 30.0% | |
| !! | GGATAAGTTTGTTAATGATG+TGG | + | chr2_4:54203240-54203259 | Msa0335140:intron | 30.0% |
| TTGCATTTAACAAGTGACAT+AGG | - | chr2_4:54203282-54203301 | None:intergenic | 30.0% | |
| AAATGCAAAACCTGATATCA+AGG | + | chr2_4:54203294-54203313 | Msa0335140:intron | 30.0% | |
| ! | TGGTATCTTCTTTGATAACA+AGG | + | chr2_4:54203480-54203499 | Msa0335140:CDS | 30.0% |
| TAACTATCAAATCTTGGTTC+TGG | - | chr2_4:54203622-54203641 | None:intergenic | 30.0% | |
| AATACCACTACAATAATGAC+TGG | - | chr2_4:54203729-54203748 | None:intergenic | 30.0% | |
| AGAAGTAAAACTTATCCTGA+TGG | + | chr2_4:54203808-54203827 | Msa0335140:intron | 30.0% | |
| ATTCATTAAGCAAAACCATC+AGG | - | chr2_4:54203826-54203845 | None:intergenic | 30.0% | |
| AAATCTATTGTGTACGTGAT+AGG | + | chr2_4:54203865-54203884 | Msa0335140:CDS | 30.0% | |
| !!! | TTTGAAGAGTACTTGTTTTG+TGG | + | chr2_4:54204238-54204257 | Msa0335140:intron | 30.0% |
| TTGCGTGTGATATTGTATAT+TGG | - | chr2_4:54204427-54204446 | None:intergenic | 30.0% | |
| TTTGTTAAATCAGACATGCA+AGG | - | chr2_4:54204497-54204516 | None:intergenic | 30.0% | |
| ! | TCCACACAGTATTTTATCTA+TGG | + | chr2_4:54204560-54204579 | Msa0335140:CDS | 30.0% |
| ! | CCACACAGTATTTTATCTAT+GGG | + | chr2_4:54204561-54204580 | Msa0335140:CDS | 30.0% |
| ATGGCAAAAAGATAAAATGG+AGG | + | chr2_4:54204915-54204934 | Msa0335140:three_prime_UTR | 30.0% | |
| CAAAAAGATAAAATGGAGGA+TGG | + | chr2_4:54204919-54204938 | Msa0335140:three_prime_UTR | 30.0% | |
| AGTAGTAGTTAAAGTAGAGG+AGG | - | chr2_4:54197914-54197933 | None:intergenic | 35.0% | |
| TCTTATTCTTCCTCAACAAC+AGG | + | chr2_4:54198083-54198102 | Msa0335140:CDS | 35.0% | |
| TTCACTACCACTATTGGTAT+AGG | + | chr2_4:54198454-54198473 | Msa0335140:intron | 35.0% | |
| TCACTACCACTATTGGTATA+GGG | + | chr2_4:54198455-54198474 | Msa0335140:intron | 35.0% | |
| CTCTGTCTTCAAAGTTACAT+GGG | - | chr2_4:54198499-54198518 | None:intergenic | 35.0% | |
| ACTCTGTCTTCAAAGTTACA+TGG | - | chr2_4:54198500-54198519 | None:intergenic | 35.0% | |
| AACCACATACATACACTCTT+GGG | + | chr2_4:54198549-54198568 | Msa0335140:intron | 35.0% | |
| !!! | TCTTGGGTTTTGTTGTATCA+AGG | + | chr2_4:54198565-54198584 | Msa0335140:intron | 35.0% |
| !!! | CTTGGGTTTTGTTGTATCAA+GGG | + | chr2_4:54198566-54198585 | Msa0335140:intron | 35.0% |
| TTCAAATTATGCTACGCTAG+AGG | + | chr2_4:54198629-54198648 | Msa0335140:intron | 35.0% | |
| TCAAATTATGCTACGCTAGA+GGG | + | chr2_4:54198630-54198649 | Msa0335140:intron | 35.0% | |
| AGTGGTTATTCTAGACAACT+CGG | + | chr2_4:54198705-54198724 | Msa0335140:intron | 35.0% | |
| GTTGTCAATCACGAAAATAG+CGG | + | chr2_4:54198876-54198895 | Msa0335140:intron | 35.0% | |
| TATCCTGTTATAGCCGTTAT+TGG | + | chr2_4:54199003-54199022 | Msa0335140:intron | 35.0% | |
| TAGCCGTTATTGGACAAAAT+TGG | + | chr2_4:54199013-54199032 | Msa0335140:intron | 35.0% | |
| ! | CAGCCAATTTTGTCCAATAA+CGG | - | chr2_4:54199019-54199038 | None:intergenic | 35.0% |
| ! | TAATGTTTTGTGCAAGGGTT+TGG | + | chr2_4:54199113-54199132 | Msa0335140:intron | 35.0% |
| ATTCAAAGAAGAAACATGGG+GGG | - | chr2_4:54199145-54199164 | None:intergenic | 35.0% | |
| !! | TTTTGGTGTAGTGCAGATTA+TGG | + | chr2_4:54199188-54199207 | Msa0335140:intron | 35.0% |
| !! | TTTCCTACTCGGTGTTTATT+AGG | + | chr2_4:54199367-54199386 | Msa0335140:intron | 35.0% |
| CAACAAGAATTTAACAGAGC+AGG | - | chr2_4:54199554-54199573 | None:intergenic | 35.0% | |
| !!! | TCACAGACTTTTGGAATTCT+GGG | - | chr2_4:54199593-54199612 | None:intergenic | 35.0% |
| !!! | TTCACAGACTTTTGGAATTC+TGG | - | chr2_4:54199594-54199613 | None:intergenic | 35.0% |
| AGAATTCCAAAAGTCTGTGA+AGG | + | chr2_4:54199593-54199612 | Msa0335140:CDS | 35.0% | |
| GAAAAAGCAGAAGAACTGAA+AGG | + | chr2_4:54199624-54199643 | Msa0335140:CDS | 35.0% | |
| AAAAGCAGAAGAACTGAAAG+GGG | + | chr2_4:54199626-54199645 | Msa0335140:CDS | 35.0% | |
| AGACATACCATTGTATGTCA+AGG | + | chr2_4:54199737-54199756 | Msa0335140:intron | 35.0% | |
| CAGCTGTACAAACAATTTGA+TGG | + | chr2_4:54199830-54199849 | Msa0335140:CDS | 35.0% | |
| TTGCTAGATAAACAAGTCTG+AGG | + | chr2_4:54199988-54200007 | Msa0335140:intron | 35.0% | |
| AATGTTGAAAGAAAAGTGGC+TGG | + | chr2_4:54200251-54200270 | Msa0335140:intron | 35.0% | |
| ! | TAGTTGGCTACATTAAGTTG+AGG | + | chr2_4:54200298-54200317 | Msa0335140:intron | 35.0% |
| ! | TGCTTCTTTGTTTGTTTGAG+TGG | + | chr2_4:54200442-54200461 | Msa0335140:intron | 35.0% |
| GAATAACTTGACACGTTTCT+TGG | + | chr2_4:54200541-54200560 | Msa0335140:intron | 35.0% | |
| ! | AATTGTGGATCACATTTTGC+TGG | - | chr2_4:54200659-54200678 | None:intergenic | 35.0% |
| AATTAGGTGAAAGTTGGGAT+AGG | + | chr2_4:54200706-54200725 | Msa0335140:intron | 35.0% | |
| AATGCTTCAGAGTCATTGTT+TGG | + | chr2_4:54200841-54200860 | Msa0335140:CDS | 35.0% | |
| !!! | AGAAACTTTTGGTGACGAAA+AGG | - | chr2_4:54200881-54200900 | None:intergenic | 35.0% |
| ! | TGGAAGGAAGTAGAAACTTT+TGG | - | chr2_4:54200892-54200911 | None:intergenic | 35.0% |
| AGGTTATGACATACTAAAGG+AGG | + | chr2_4:54200951-54200970 | Msa0335140:CDS | 35.0% | |
| ATACTAAAGGAGGAACTAAG+TGG | + | chr2_4:54200961-54200980 | Msa0335140:CDS | 35.0% | |
| GTAAGAAGTTTGATGAGATC+AGG | + | chr2_4:54201082-54201101 | Msa0335140:CDS | 35.0% | |
| TCTTAAGGGAGAGATATTGT+AGG | - | chr2_4:54201148-54201167 | None:intergenic | 35.0% | |
| ! | GGCTTTTCACCTAAATGAAA+AGG | - | chr2_4:54201182-54201201 | None:intergenic | 35.0% |
| !! | AAAAATGTTGGTGTTGGTCA+TGG | + | chr2_4:54201305-54201324 | Msa0335140:intron | 35.0% |
| !! | TGAATCACCTTTTATTGGCT+TGG | + | chr2_4:54201358-54201377 | Msa0335140:intron | 35.0% |
| !! | TGTTTGGTGCAATATTTGTC+TGG | + | chr2_4:54201532-54201551 | Msa0335140:intron | 35.0% |
| CTCACTAATGTACAAAGAGT+AGG | - | chr2_4:54201675-54201694 | None:intergenic | 35.0% | |
| CTACTCTTTGTACATTAGTG+AGG | + | chr2_4:54201673-54201692 | Msa0335140:intron | 35.0% | |
| AGTGAGGATGAAGATATACA+CGG | + | chr2_4:54201689-54201708 | Msa0335140:intron | 35.0% | |
| AACTCATCTGTGACATGTTT+AGG | + | chr2_4:54201900-54201919 | Msa0335140:intron | 35.0% | |
| ! | CATCAGCATTGAATACAGTA+CGG | - | chr2_4:54202114-54202133 | None:intergenic | 35.0% |
| AGCATCTGTCTCTTGAAAAA+TGG | - | chr2_4:54202213-54202232 | None:intergenic | 35.0% | |
| TTGATGTAAGCATTAAGCAC+TGG | - | chr2_4:54202418-54202437 | None:intergenic | 35.0% | |
| AGTGCTTAATGCTTACATCA+AGG | + | chr2_4:54202417-54202436 | Msa0335140:CDS | 35.0% | |
| !!! | GTACCTTTATTTTCCCAATC+AGG | + | chr2_4:54202596-54202615 | Msa0335140:intron | 35.0% |
| AGCCATGGATCAATGTAAAT+GGG | - | chr2_4:54202665-54202684 | None:intergenic | 35.0% | |
| AAAACAATCAGTTACAGCCA+TGG | - | chr2_4:54202680-54202699 | None:intergenic | 35.0% | |
| GTGAACTCCTAAATGAAAAC+TGG | + | chr2_4:54202888-54202907 | Msa0335140:intron | 35.0% | |
| ! | GGCTTTTCCAGTTTTCATTT+AGG | - | chr2_4:54202898-54202917 | None:intergenic | 35.0% |
| AAATGAAAACTGGAAAAGCC+AGG | + | chr2_4:54202898-54202917 | Msa0335140:intron | 35.0% | |
| ! | GAGGCTTTTGAATTTCTCAA+AGG | - | chr2_4:54202945-54202964 | None:intergenic | 35.0% |
| !!! | AGGCAATTTTTTCCTCTTGA+GGG | - | chr2_4:54203127-54203146 | None:intergenic | 35.0% |
| !!! | AAGGCAATTTTTTCCTCTTG+AGG | - | chr2_4:54203128-54203147 | None:intergenic | 35.0% |
| CACATCTAACGATCATCATA+AGG | - | chr2_4:54203147-54203166 | None:intergenic | 35.0% | |
| CTTATGATGATCGTTAGATG+TGG | + | chr2_4:54203145-54203164 | Msa0335140:intron | 35.0% | |
| TATGATGATCGTTAGATGTG+GGG | + | chr2_4:54203147-54203166 | Msa0335140:intron | 35.0% | |
| CATGGTGCTTATAAAAGTCA+TGG | + | chr2_4:54203460-54203479 | Msa0335140:CDS | 35.0% | |
| ATCTCCAGTCATTATTGTAG+TGG | + | chr2_4:54203722-54203741 | Msa0335140:CDS | 35.0% | |
| GCAAACTAAGAATGAACATC+TGG | - | chr2_4:54203766-54203785 | None:intergenic | 35.0% | |
| TATTGTGTACGTGATAGGAA+TGG | + | chr2_4:54203870-54203889 | Msa0335140:CDS | 35.0% | |
| ATTGTGTACGTGATAGGAAT+GGG | + | chr2_4:54203871-54203890 | Msa0335140:CDS | 35.0% | |
| AAAGCAATAAAAACGAGAGC+AGG | - | chr2_4:54204164-54204183 | None:intergenic | 35.0% | |
| ! | GTAGTTTTTCTTGATCATGC+CGG | + | chr2_4:54204202-54204221 | Msa0335140:intron | 35.0% |
| ATATCACACGCAACATGATT+CGG | + | chr2_4:54204434-54204453 | Msa0335140:intron | 35.0% | |
| CCCATAGATAAAATACTGTG+TGG | - | chr2_4:54204564-54204583 | None:intergenic | 35.0% | |
| TCTATGGGCTTTACAACAAA+TGG | + | chr2_4:54204576-54204595 | Msa0335140:CDS | 35.0% | |
| GCTTTACAACAAATGGAAGA+TGG | + | chr2_4:54204583-54204602 | Msa0335140:CDS | 35.0% | |
| ! | AGGATGCTATTTACTATACG+TGG | + | chr2_4:54204617-54204636 | Msa0335140:CDS | 35.0% |
| AATCCCTAAAACGGGAAAAA+GGG | - | chr2_4:54204694-54204713 | None:intergenic | 35.0% | |
| AAATCCCTAAAACGGGAAAA+AGG | - | chr2_4:54204695-54204714 | None:intergenic | 35.0% | |
| GTGAAGACGATACGTAGATA+CGG | + | chr2_4:54198192-54198211 | Msa0335140:CDS | 40.0% | |
| TTTGGTCCCTATACCAATAG+TGG | - | chr2_4:54198464-54198483 | None:intergenic | 40.0% | |
| GAACCACATACATACACTCT+TGG | + | chr2_4:54198548-54198567 | Msa0335140:intron | 40.0% | |
| ! | AACCCAAGAGTGTATGTATG+TGG | - | chr2_4:54198554-54198573 | None:intergenic | 40.0% |
| TTGAATCCCTGAATGTACCA+CGG | - | chr2_4:54198845-54198864 | None:intergenic | 40.0% | |
| TGTCCAATAACGGCTATAAC+AGG | - | chr2_4:54199009-54199028 | None:intergenic | 40.0% | |
| CGTTATTGGACAAAATTGGC+TGG | + | chr2_4:54199017-54199036 | Msa0335140:intron | 40.0% | |
| TATTGGACAAAATTGGCTGG+TGG | + | chr2_4:54199020-54199039 | Msa0335140:intron | 40.0% | |
| ATTGGACAAAATTGGCTGGT+GGG | + | chr2_4:54199021-54199040 | Msa0335140:intron | 40.0% | |
| TTGGCTGGTGGGAATTAATT+TGG | + | chr2_4:54199032-54199051 | Msa0335140:intron | 40.0% | |
| TGTCCTAATAAACACCGAGT+AGG | - | chr2_4:54199373-54199392 | None:intergenic | 40.0% | |
| ! | TCGGTGTTTATTAGGACAAC+AGG | + | chr2_4:54199375-54199394 | Msa0335140:intron | 40.0% |
| CGGTGTTTATTAGGACAACA+GGG | + | chr2_4:54199376-54199395 | Msa0335140:intron | 40.0% | |
| TAGATCCAACCTTTCATGCT+AGG | + | chr2_4:54199457-54199476 | Msa0335140:intron | 40.0% | |
| TATGTCCTAGCATGAAAGGT+TGG | - | chr2_4:54199465-54199484 | None:intergenic | 40.0% | |
| AGGCGACAAAATCTATGAGT+GGG | - | chr2_4:54199534-54199553 | None:intergenic | 40.0% | |
| ! | TCAGTTCCTTCACAGACTTT+TGG | - | chr2_4:54199602-54199621 | None:intergenic | 40.0% |
| AAAGTCTGTGAAGGAACTGA+AGG | + | chr2_4:54199602-54199621 | Msa0335140:CDS | 40.0% | |
| GAACTGAAAGGGGTAAAAGA+AGG | + | chr2_4:54199636-54199655 | Msa0335140:CDS | 40.0% | |
| !! | ACAAACAATTTGATGGCGTG+TGG | + | chr2_4:54199837-54199856 | Msa0335140:CDS | 40.0% |
| !! | CTGAAGCACTGTATTCTTGT+TGG | + | chr2_4:54199961-54199980 | Msa0335140:intron | 40.0% |
| GAGGTATACACAAAGCACAT+TGG | + | chr2_4:54200007-54200026 | Msa0335140:intron | 40.0% | |
| GAAAATTTCAGCTGCAACTG+AGG | + | chr2_4:54200613-54200632 | Msa0335140:CDS | 40.0% | |
| TCTCAGTAAGCCATCAATTG+TGG | - | chr2_4:54200674-54200693 | None:intergenic | 40.0% | |
| !! | TTCCTGGTTTTTCTCTTCCT+CGG | - | chr2_4:54200809-54200828 | None:intergenic | 40.0% |
| AAAAACCAGGAATCTGCTTC+TGG | + | chr2_4:54200817-54200836 | Msa0335140:CDS | 40.0% | |
| ATTGTGGACATGACCAAGAA+AGG | + | chr2_4:54200931-54200950 | Msa0335140:CDS | 40.0% | |
| TTATGCCCTCTAACCAATCT+TGG | + | chr2_4:54201055-54201074 | Msa0335140:CDS | 40.0% | |
| ACTTCTTACTCCACCAAGAT+TGG | - | chr2_4:54201071-54201090 | None:intergenic | 40.0% | |
| GTTTGATGAGATCAGGGATA+AGG | + | chr2_4:54201089-54201108 | Msa0335140:CDS | 40.0% | |
| TGGTTGTGGCTTTCTTGAAT+TGG | + | chr2_4:54201724-54201743 | Msa0335140:intron | 40.0% | |
| ACAAAAGGAGTGAGAACCTA+CGG | - | chr2_4:54202269-54202288 | None:intergenic | 40.0% | |
| AGTGATATAGGACCCAGAAA+AGG | + | chr2_4:54202442-54202461 | Msa0335140:intron | 40.0% | |
| ! | GTGCTAAGCTTTTTGGATAC+AGG | - | chr2_4:54202640-54202659 | None:intergenic | 40.0% |
| AGCCCATTTACATTGATCCA+TGG | + | chr2_4:54202660-54202679 | Msa0335140:intron | 40.0% | |
| CAGCCATGGATCAATGTAAA+TGG | - | chr2_4:54202666-54202685 | None:intergenic | 40.0% | |
| AGAGTTTATGGTTGTGGCAT+TGG | - | chr2_4:54202768-54202787 | None:intergenic | 40.0% | |
| AGGTTTGCCATTGTGTCAAA+AGG | + | chr2_4:54202836-54202855 | Msa0335140:intron | 40.0% | |
| AGGAGTTCACCATTGAAAGT+CGG | - | chr2_4:54202878-54202897 | None:intergenic | 40.0% | |
| TACCTAATATAGCCCTCAAG+AGG | + | chr2_4:54203112-54203131 | Msa0335140:intron | 40.0% | |
| TTCCTCTTGAGGGCTATATT+AGG | - | chr2_4:54203117-54203136 | None:intergenic | 40.0% | |
| !! | AAAGTCAAGTGGTTTGGTTC+TGG | + | chr2_4:54203219-54203238 | Msa0335140:intron | 40.0% |
| GCAAAACCTGATATCAAGGA+AGG | + | chr2_4:54203298-54203317 | Msa0335140:intron | 40.0% | |
| AAACCTGATATCAAGGAAGG+AGG | + | chr2_4:54203301-54203320 | Msa0335140:intron | 40.0% | |
| ATACATGCAGGATCTGTACA+TGG | - | chr2_4:54203665-54203684 | None:intergenic | 40.0% | |
| TGTAAGAGAAGCCAAGATGT+TGG | + | chr2_4:54203695-54203714 | Msa0335140:CDS | 40.0% | |
| TGGAGATGATTCCAACATCT+TGG | - | chr2_4:54203709-54203728 | None:intergenic | 40.0% | |
| TTGTGTACGTGATAGGAATG+GGG | + | chr2_4:54203872-54203891 | Msa0335140:CDS | 40.0% | |
| AGGAATGGGGAAATTACAGA+AGG | + | chr2_4:54203885-54203904 | Msa0335140:CDS | 40.0% | |
| AATGGGGAAATTACAGAAGG+TGG | + | chr2_4:54203888-54203907 | Msa0335140:CDS | 40.0% | |
| ! | GATGCGTGCCTTCTATTTTA+CGG | - | chr2_4:54204099-54204118 | None:intergenic | 40.0% |
| ATCAAGTACACCGAACCATT+TGG | + | chr2_4:54204116-54204135 | Msa0335140:intron | 40.0% | |
| TAAGTTTATGAGGGAGACCT+TGG | + | chr2_4:54204279-54204298 | Msa0335140:intron | 40.0% | |
| GAGGGTAGATATACACAAAG+CGG | - | chr2_4:54204371-54204390 | None:intergenic | 40.0% | |
| TATCACACGCAACATGATTC+GGG | + | chr2_4:54204435-54204454 | Msa0335140:intron | 40.0% | |
| CAAATGGAAGATGGAGATCA+TGG | + | chr2_4:54204592-54204611 | Msa0335140:CDS | 40.0% | |
| ATCCCTAAAACGGGAAAAAG+GGG | - | chr2_4:54204693-54204712 | None:intergenic | 40.0% | |
| !! | CTCTAGCTTTGTCCCATAAA+TGG | + | chr2_4:54204896-54204915 | Msa0335140:three_prime_UTR | 40.0% |
| GATGAACGAACCTGTTGTTG+AGG | - | chr2_4:54198096-54198115 | None:intergenic | 45.0% | |
| TTATCCAAACAGGGCCTTAG+TGG | + | chr2_4:54198353-54198372 | Msa0335140:intron | 45.0% | |
| TGAATCCCTGAATGTACCAC+GGG | - | chr2_4:54198844-54198863 | None:intergenic | 45.0% | |
| GTAGTGCAGATTATGGATGC+TGG | + | chr2_4:54199195-54199214 | Msa0335140:intron | 45.0% | |
| AGTGGGAGGAAAGAAAAGCT+AGG | - | chr2_4:54199517-54199536 | None:intergenic | 45.0% | |
| CGACAAAATCTATGAGTGGG+AGG | - | chr2_4:54199531-54199550 | None:intergenic | 45.0% | |
| CAGGCGACAAAATCTATGAG+TGG | - | chr2_4:54199535-54199554 | None:intergenic | 45.0% | |
| !! | GAGCTAGCCTTGACATACAA+TGG | - | chr2_4:54199747-54199766 | None:intergenic | 45.0% |
| ! | AGGCTAGCTCGACACTTAAA+AGG | + | chr2_4:54199757-54199776 | Msa0335140:intron | 45.0% |
| !! | CTTAAAAGGAGTGCCTGAGA+TGG | + | chr2_4:54199771-54199790 | Msa0335140:intron | 45.0% |
| ATTCGCCAATCAACCATCTC+AGG | - | chr2_4:54199787-54199806 | None:intergenic | 45.0% | |
| AATTTCAGCTGCAACTGAGG+AGG | + | chr2_4:54200616-54200635 | Msa0335140:CDS | 45.0% | |
| GAAAGTTGGGATAGGAAAGC+AGG | + | chr2_4:54200714-54200733 | Msa0335140:CDS | 45.0% | |
| ATAGGAAAGCAGGACTCTTC+AGG | + | chr2_4:54200724-54200743 | Msa0335140:CDS | 45.0% | |
| ATGCTGATGCAAAGCAAGGA+AGG | + | chr2_4:54200773-54200792 | Msa0335140:CDS | 45.0% | |
| !! | TCCTGGTTTTTCTCTTCCTC+GGG | - | chr2_4:54200808-54200827 | None:intergenic | 45.0% |
| TTTGTACTTGTTTCGCCGCT+AGG | - | chr2_4:54201021-54201040 | None:intergenic | 45.0% | |
| ! | CTCCACCAAGATTGGTTAGA+GGG | - | chr2_4:54201063-54201082 | None:intergenic | 45.0% |
| ! | ACTCCACCAAGATTGGTTAG+AGG | - | chr2_4:54201064-54201083 | None:intergenic | 45.0% |
| TTAAAGAAACGCTTGGACGC+AGG | - | chr2_4:54201207-54201226 | None:intergenic | 45.0% | |
| CAGGAGTAGATAATACCTCC+TGG | - | chr2_4:54201257-54201276 | None:intergenic | 45.0% | |
| GATATACACGGTCCACTTGA+TGG | + | chr2_4:54201701-54201720 | Msa0335140:intron | 45.0% | |
| ACAGTACGGCCTAGATATGT+TGG | - | chr2_4:54202100-54202119 | None:intergenic | 45.0% | |
| AGATGCTGCACTTGCACATA+AGG | + | chr2_4:54202226-54202245 | Msa0335140:CDS | 45.0% | |
| AATACATCAACGGGATCCGT+AGG | + | chr2_4:54202250-54202269 | Msa0335140:intron | 45.0% | |
| TTCTGCCGCAAATTCTGGTA+AGG | - | chr2_4:54202377-54202396 | None:intergenic | 45.0% | |
| !! | ATGGGCTGTGCTAAGCTTTT+TGG | - | chr2_4:54202647-54202666 | None:intergenic | 45.0% |
| CATTGGCGATTCAACACTAG+AGG | - | chr2_4:54202751-54202770 | None:intergenic | 45.0% | |
| AACCTGTAGCCTATTGGACT+TGG | - | chr2_4:54202821-54202840 | None:intergenic | 45.0% | |
| ATGGCAAACCTGTAGCCTAT+TGG | - | chr2_4:54202827-54202846 | None:intergenic | 45.0% | |
| ! | TGGGTGTCCTTTTGACACAA+TGG | - | chr2_4:54202846-54202865 | None:intergenic | 45.0% |
| GAGTTCACCATTGAAAGTCG+GGG | - | chr2_4:54202876-54202895 | None:intergenic | 45.0% | |
| GGAGTTCACCATTGAAAGTC+GGG | - | chr2_4:54202877-54202896 | None:intergenic | 45.0% | |
| AAAACTGGAAAAGCCAGGAC+TGG | + | chr2_4:54202903-54202922 | Msa0335140:intron | 45.0% | |
| ! | ATGGATTCAAAGGGCACAAG+AGG | - | chr2_4:54202964-54202983 | None:intergenic | 45.0% |
| GGGGTTCACATGGATTCAAA+GGG | - | chr2_4:54202973-54202992 | None:intergenic | 45.0% | |
| AGGGGTTCACATGGATTCAA+AGG | - | chr2_4:54202974-54202993 | None:intergenic | 45.0% | |
| TAGCTATCTTGCCAGAGTCT+TGG | + | chr2_4:54203018-54203037 | Msa0335140:intron | 45.0% | |
| AGCTATCTTGCCAGAGTCTT+GGG | + | chr2_4:54203019-54203038 | Msa0335140:intron | 45.0% | |
| CAGGAAAATTCCCAAGACTC+TGG | - | chr2_4:54203032-54203051 | None:intergenic | 45.0% | |
| CTTCCTCCTTCCTTGATATC+AGG | - | chr2_4:54203307-54203326 | None:intergenic | 45.0% | |
| TTACAGCGTTCAATCAGCTG+AGG | - | chr2_4:54203433-54203452 | None:intergenic | 45.0% | |
| GGAAATTACAGAAGGTGGCA+AGG | + | chr2_4:54203893-54203912 | Msa0335140:CDS | 45.0% | |
| ACTCTTCAAACCGACTGACA+CGG | - | chr2_4:54204228-54204247 | None:intergenic | 45.0% | |
| ACAATGTTACCGATGTGCCA+AGG | - | chr2_4:54204299-54204318 | None:intergenic | 45.0% | |
| AACATTGTTCCCTTGTGACC+TGG | + | chr2_4:54204311-54204330 | Msa0335140:intron | 45.0% | |
| TGCACGAGACTCTAAACATG+CGG | - | chr2_4:54204402-54204421 | None:intergenic | 45.0% | |
| ATCACACGCAACATGATTCG+GGG | + | chr2_4:54204436-54204455 | Msa0335140:intron | 45.0% | |
| ! | TTCCCCCTTTTTCCCGTTTT+AGG | + | chr2_4:54204687-54204706 | Msa0335140:three_prime_UTR | 45.0% |
| ! | TCCCCCTTTTTCCCGTTTTA+GGG | + | chr2_4:54204688-54204707 | Msa0335140:three_prime_UTR | 45.0% |
| TCCCTAAAACGGGAAAAAGG+GGG | - | chr2_4:54204692-54204711 | None:intergenic | 45.0% | |
| ! | AGATGAGCTAGCTTGATGCA+TGG | + | chr2_4:54204864-54204883 | Msa0335140:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTTTAACT+AGG | + | chr2_4:54204531-54204550 | Msa0335140:intron | 5.0% |
| !! | AAATAATGATAATTTAAAAA+TGG | - | chr2_4:54204790-54204809 | None:intergenic | 5.0% |
| TTCTCCACTAAGGCCCTGTT+TGG | - | chr2_4:54198360-54198379 | None:intergenic | 50.0% | |
| TGTGATCCCGTGGTACATTC+AGG | + | chr2_4:54198835-54198854 | Msa0335140:intron | 50.0% | |
| GTGATCCCGTGGTACATTCA+GGG | + | chr2_4:54198836-54198855 | Msa0335140:intron | 50.0% | |
| ! | CAGATTATGGATGCTGGCTG+TGG | + | chr2_4:54199201-54199220 | Msa0335140:intron | 50.0% |
| GAGTGCCTGAGATGGTTGAT+TGG | + | chr2_4:54199779-54199798 | Msa0335140:intron | 50.0% | |
| AGCTGAAGCTGCTGCAAAGA+AGG | + | chr2_4:54199865-54199884 | Msa0335140:CDS | 50.0% | |
| CAGGATGCTGATGCAAAGCA+AGG | + | chr2_4:54200769-54200788 | Msa0335140:CDS | 50.0% | |
| ACCCGAGGAAGAGAAAAACC+AGG | + | chr2_4:54200804-54200823 | Msa0335140:CDS | 50.0% | |
| CATTGCCAGAAGCAGATTCC+TGG | - | chr2_4:54200825-54200844 | None:intergenic | 50.0% | |
| GAACGAACAGGCTGTCTCTT+AGG | - | chr2_4:54200994-54201013 | None:intergenic | 50.0% | |
| TGCCCTCTAACCAATCTTGG+TGG | + | chr2_4:54201058-54201077 | Msa0335140:CDS | 50.0% | |
| ! | CCTGGCTCTTTGTCTTCACT+GGG | - | chr2_4:54201239-54201258 | None:intergenic | 50.0% |
| ! | TCCTGGCTCTTTGTCTTCAC+TGG | - | chr2_4:54201240-54201259 | None:intergenic | 50.0% |
| AGTGAAGACAAAGAGCCAGG+AGG | + | chr2_4:54201239-54201258 | Msa0335140:CDS | 50.0% | |
| GGCAGATGGTAGATGACTTG+CGG | + | chr2_4:54201404-54201423 | Msa0335140:intron | 50.0% | |
| ! | GCAGATGGTAGATGACTTGC+GGG | + | chr2_4:54201405-54201424 | Msa0335140:intron | 50.0% |
| ATACACGGTCCACTTGATGG+TGG | + | chr2_4:54201704-54201723 | Msa0335140:intron | 50.0% | |
| AAGCCACAACCACCATCAAG+TGG | - | chr2_4:54201716-54201735 | None:intergenic | 50.0% | |
| TGCACTTCTGCCGCAAATTC+TGG | - | chr2_4:54202382-54202401 | None:intergenic | 50.0% | |
| ! | AGAATTTGCGGCAGAAGTGC+AGG | + | chr2_4:54202381-54202400 | Msa0335140:CDS | 50.0% |
| CTCCAAGTCCAATAGGCTAC+AGG | + | chr2_4:54202816-54202835 | Msa0335140:intron | 50.0% | |
| GATTACTGTTGCTCCAGTCC+TGG | - | chr2_4:54202919-54202938 | None:intergenic | 50.0% | |
| TTAATCGAGCCCACAGAGGA+GGG | - | chr2_4:54202993-54203012 | None:intergenic | 50.0% | |
| ATTAATCGAGCCCACAGAGG+AGG | - | chr2_4:54202994-54203013 | None:intergenic | 50.0% | |
| TCCTCTGTGGGCTCGATTAA+TGG | + | chr2_4:54202993-54203012 | Msa0335140:intron | 50.0% | |
| GAACGCTGTAAAGCAGAGCA+TGG | + | chr2_4:54203442-54203461 | Msa0335140:CDS | 50.0% | |
| GTGATGAGGGCCAAATGGTT+CGG | - | chr2_4:54204129-54204148 | None:intergenic | 50.0% | |
| GTGTTGTGATGAGGGCCAAA+TGG | - | chr2_4:54204134-54204153 | None:intergenic | 50.0% | |
| GCAGCAGTGTGTTGTGATGA+GGG | - | chr2_4:54204142-54204161 | None:intergenic | 50.0% | |
| ATTGTTCCCTTGTGACCTGG+AGG | + | chr2_4:54204314-54204333 | Msa0335140:intron | 50.0% | |
| CACGAGACTCTAAACATGCG+GGG | - | chr2_4:54204400-54204419 | None:intergenic | 50.0% | |
| GCACGAGACTCTAAACATGC+GGG | - | chr2_4:54204401-54204420 | None:intergenic | 50.0% | |
| GGAAGATGGAGATCATGGAG+AGG | + | chr2_4:54204597-54204616 | Msa0335140:CDS | 50.0% | |
| TTGAGAGAGATGCAGCAGCA+AGG | + | chr2_4:54204643-54204662 | Msa0335140:CDS | 50.0% | |
| TCACACTAGGTGTGATCCCG+TGG | + | chr2_4:54198825-54198844 | Msa0335140:intron | 55.0% | |
| CCTGTTCGTTCCACTCCTAG+CGG | + | chr2_4:54201003-54201022 | Msa0335140:CDS | 55.0% | |
| ACTTGTTTCGCCGCTAGGAG+TGG | - | chr2_4:54201016-54201035 | None:intergenic | 55.0% | |
| AGAAACGCTTGGACGCAGGA+TGG | - | chr2_4:54201203-54201222 | None:intergenic | 55.0% | |
| CCCAGTGAAGACAAAGAGCC+AGG | + | chr2_4:54201236-54201255 | Msa0335140:CDS | 55.0% | |
| !! | GGTCCACTTGATGGTGGTTG+TGG | + | chr2_4:54201710-54201729 | Msa0335140:intron | 55.0% |
| ! | ATTTGCGGCAGAAGTGCAGG+AGG | + | chr2_4:54202384-54202403 | Msa0335140:CDS | 55.0% |
| ACCATTGAAAGTCGGGGCAG+GGG | - | chr2_4:54202870-54202889 | None:intergenic | 55.0% | |
| CACCATTGAAAGTCGGGGCA+GGG | - | chr2_4:54202871-54202890 | None:intergenic | 55.0% | |
| TCACCATTGAAAGTCGGGGC+AGG | - | chr2_4:54202872-54202891 | None:intergenic | 55.0% | |
| CATGTGAACCCCTCCTCTGT+GGG | + | chr2_4:54202981-54203000 | Msa0335140:intron | 55.0% | |
| TAATCGAGCCCACAGAGGAG+GGG | - | chr2_4:54202992-54203011 | None:intergenic | 55.0% | |
| GCCATTAATCGAGCCCACAG+AGG | - | chr2_4:54202997-54203016 | None:intergenic | 55.0% | |
| GATCCTGCATGTATCCGACG+CGG | + | chr2_4:54203671-54203690 | Msa0335140:intron | 55.0% | |
| GGCTTCTCTTACATCCGCGT+CGG | - | chr2_4:54203688-54203707 | None:intergenic | 55.0% | |
| GGCAGCAGTGTGTTGTGATG+AGG | - | chr2_4:54204143-54204162 | None:intergenic | 55.0% | |
| TTCAAACCGACTGACACGGC+CGG | - | chr2_4:54204224-54204243 | None:intergenic | 55.0% | |
| TGAGGGAGACCTTGGCACAT+CGG | + | chr2_4:54204287-54204306 | Msa0335140:intron | 55.0% | |
| AAACATGCGGGGTCTGAGGA+GGG | - | chr2_4:54204389-54204408 | None:intergenic | 55.0% | |
| TAAACATGCGGGGTCTGAGG+AGG | - | chr2_4:54204390-54204409 | None:intergenic | 55.0% | |
| CTCTAAACATGCGGGGTCTG+AGG | - | chr2_4:54204393-54204412 | None:intergenic | 55.0% | |
| AGGAAGGCAGACATCACCCG+AGG | + | chr2_4:54200789-54200808 | Msa0335140:CDS | 60.0% | |
| CCGCTAGGAGTGGAACGAAC+AGG | - | chr2_4:54201006-54201025 | None:intergenic | 60.0% | |
| TGAAAGTCGGGGCAGGGGTT+GGG | - | chr2_4:54202865-54202884 | None:intergenic | 60.0% | |
| TTGAAAGTCGGGGCAGGGGT+TGG | - | chr2_4:54202866-54202885 | None:intergenic | 60.0% | |
| ACCCCTGCCCCGACTTTCAA+TGG | + | chr2_4:54202866-54202885 | Msa0335140:intron | 60.0% | |
| CCACAGAGGAGGGGTTCACA+TGG | - | chr2_4:54202983-54203002 | None:intergenic | 60.0% | |
| CCATGTGAACCCCTCCTCTG+TGG | + | chr2_4:54202980-54202999 | Msa0335140:intron | 60.0% | |
| CATCCGCGTCGGATACATGC+AGG | - | chr2_4:54203677-54203696 | None:intergenic | 60.0% | |
| ATCATGCCGGCCGTGTCAGT+CGG | + | chr2_4:54204215-54204234 | Msa0335140:intron | 60.0% | |
| CCGTGACCTCCAGGTCACAA+GGG | - | chr2_4:54204323-54204342 | None:intergenic | 60.0% | |
| CCCTTGTGACCTGGAGGTCA+CGG | + | chr2_4:54204320-54204339 | Msa0335140:intron | 60.0% | |
| CCTTGTGACCTGGAGGTCAC+GGG | + | chr2_4:54204321-54204340 | Msa0335140:intron | 60.0% | |
| GATTTGGACCCGTGACCTCC+AGG | - | chr2_4:54204332-54204351 | None:intergenic | 60.0% | |
| CCCGTGACCTCCAGGTCACA+AGG | - | chr2_4:54204324-54204343 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 54197865 | 54204953 | 54197865 | ID=Msa0335140;Name=Msa0335140 |
| chr2_4 | mRNA | 54197865 | 54204953 | 54197865 | ID=Msa0335140-mRNA-1;Parent=Msa0335140;Name=Msa0335140-mRNA-1;_AED=0.14;_eAED=0.14;_QI=171|0.85|0.93|0.93|1|1|15|269|465 |
| chr2_4 | exon | 54197865 | 54198104 | 54197865 | ID=Msa0335140-mRNA-1:exon:16356;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54198189 | 54198259 | 54198189 | ID=Msa0335140-mRNA-1:exon:16357;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54199587 | 54199670 | 54199587 | ID=Msa0335140-mRNA-1:exon:16358;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54199811 | 54199886 | 54199811 | ID=Msa0335140-mRNA-1:exon:16359;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54200593 | 54200637 | 54200593 | ID=Msa0335140-mRNA-1:exon:16360;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54200712 | 54201110 | 54200712 | ID=Msa0335140-mRNA-1:exon:16361;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54201192 | 54201260 | 54201192 | ID=Msa0335140-mRNA-1:exon:16362;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54201409 | 54201473 | 54201409 | ID=Msa0335140-mRNA-1:exon:16363;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54202199 | 54202267 | 54202199 | ID=Msa0335140-mRNA-1:exon:16364;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54202366 | 54202438 | 54202366 | ID=Msa0335140-mRNA-1:exon:16365;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54202584 | 54202589 | 54202584 | ID=Msa0335140-mRNA-1:exon:16366;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54203397 | 54203501 | 54203397 | ID=Msa0335140-mRNA-1:exon:16367;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54203672 | 54203743 | 54203672 | ID=Msa0335140-mRNA-1:exon:16368;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54203852 | 54203914 | 54203852 | ID=Msa0335140-mRNA-1:exon:16369;Parent=Msa0335140-mRNA-1 |
| chr2_4 | exon | 54204553 | 54204953 | 54204553 | ID=Msa0335140-mRNA-1:exon:16370;Parent=Msa0335140-mRNA-1 |
| chr2_4 | five_prime_UTR | 54197865 | 54198035 | 54197865 | ID=Msa0335140-mRNA-1:five_prime_utr;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54198036 | 54198104 | 54198036 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54198189 | 54198259 | 54198189 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54199587 | 54199670 | 54199587 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54199811 | 54199886 | 54199811 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54200593 | 54200637 | 54200593 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54200712 | 54201110 | 54200712 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54201192 | 54201260 | 54201192 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54201409 | 54201473 | 54201409 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54202199 | 54202267 | 54202199 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54202366 | 54202438 | 54202366 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54202584 | 54202589 | 54202584 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54203397 | 54203501 | 54203397 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54203672 | 54203743 | 54203672 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54203852 | 54203914 | 54203852 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | CDS | 54204553 | 54204684 | 54204553 | ID=Msa0335140-mRNA-1:cds;Parent=Msa0335140-mRNA-1 |
| chr2_4 | three_prime_UTR | 54204685 | 54204953 | 54204685 | ID=Msa0335140-mRNA-1:three_prime_utr;Parent=Msa0335140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
