Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073350 | XP_016162628.1 | 64.327 | 171 | 21 | 1 | 1 | 131 | 1 | 171 | 2.19e-68 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073350 | sp|B8AFI3|GLO14_ORYSI | 51.744 | 172 | 41 | 1 | 1 | 130 | 1 | 172 | 7.77e-55 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073350 | A0A6P4DNV6 | 62.573 | 171 | 24 | 1 | 1 | 131 | 1 | 171 | 9.13e-67 | 226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa1073350 | 0.814519 | 1.478022e-51 | -8.615850e-47 |
| Msa0012440 | Msa1073350 | 0.882895 | 7.095865e-71 | -8.615850e-47 |
| Msa0023170 | Msa1073350 | 0.806001 | 1.016670e-49 | -8.615850e-47 |
| Msa0036430 | Msa1073350 | 0.834414 | 3.038725e-56 | -8.615850e-47 |
| Msa0044020 | Msa1073350 | 0.801512 | 8.693856e-49 | -8.615850e-47 |
| Msa0050040 | Msa1073350 | 0.802162 | 6.394892e-49 | -8.615850e-47 |
| Msa0057240 | Msa1073350 | 0.884220 | 2.309388e-71 | -8.615850e-47 |
| Msa0084500 | Msa1073350 | 0.821714 | 3.486384e-53 | -8.615850e-47 |
| Msa0096000 | Msa1073350 | 0.803625 | 3.188891e-49 | -8.615850e-47 |
| Msa0102990 | Msa1073350 | 0.803342 | 3.650211e-49 | -8.615850e-47 |
| Msa0105340 | Msa1073350 | 0.804205 | 2.415814e-49 | -8.615850e-47 |
| Msa0109950 | Msa1073350 | 0.825887 | 3.667529e-54 | -8.615850e-47 |
| Msa0607500 | Msa1073350 | 0.823839 | 1.115883e-53 | -8.615850e-47 |
| Msa0611380 | Msa1073350 | 0.816469 | 5.443404e-52 | -8.615850e-47 |
| Msa0619980 | Msa1073350 | 0.876937 | 9.385048e-69 | -8.615850e-47 |
| Msa0620260 | Msa1073350 | 0.813560 | 2.406800e-51 | -8.615850e-47 |
| Msa0621770 | Msa1073350 | 0.800224 | 1.593170e-48 | -8.615850e-47 |
| Msa0621890 | Msa1073350 | 0.808681 | 2.748910e-50 | -8.615850e-47 |
| Msa0622410 | Msa1073350 | 0.824182 | 9.271053e-54 | -8.615850e-47 |
| Msa0625890 | Msa1073350 | 0.822046 | 2.920857e-53 | -8.615850e-47 |
| Msa0628640 | Msa1073350 | 0.825201 | 5.333266e-54 | -8.615850e-47 |
| Msa0631120 | Msa1073350 | 0.849362 | 3.394607e-60 | -8.615850e-47 |
| Msa0642910 | Msa1073350 | 0.809973 | 1.451842e-50 | -8.615850e-47 |
| Msa0645050 | Msa1073350 | 0.803246 | 3.820183e-49 | -8.615850e-47 |
| Msa0652980 | Msa1073350 | 0.826318 | 2.897591e-54 | -8.615850e-47 |
| Msa0663090 | Msa1073350 | 0.847301 | 1.260845e-59 | -8.615850e-47 |
| Msa0663680 | Msa1073350 | 0.829511 | 4.941813e-55 | -8.615850e-47 |
| Msa0666030 | Msa1073350 | 0.845131 | 4.916722e-59 | -8.615850e-47 |
| Msa0669340 | Msa1073350 | 0.844383 | 7.821050e-59 | -8.615850e-47 |
| Msa0691160 | Msa1073350 | 0.814057 | 1.870127e-51 | -8.615850e-47 |
| Msa0695370 | Msa1073350 | 0.806872 | 6.659551e-50 | -8.615850e-47 |
| Msa0706370 | Msa1073350 | 0.869312 | 3.401766e-66 | -8.615850e-47 |
| Msa0716450 | Msa1073350 | 0.816791 | 4.608471e-52 | -8.615850e-47 |
| Msa0717260 | Msa1073350 | 0.830673 | 2.571766e-55 | -8.615850e-47 |
| Msa0741900 | Msa1073350 | 0.873632 | 1.265325e-67 | -8.615850e-47 |
| Msa0758320 | Msa1073350 | 0.816470 | 5.438690e-52 | -8.615850e-47 |
| Msa0772020 | Msa1073350 | 0.860941 | 1.453335e-63 | -8.615850e-47 |
| Msa0775440 | Msa1073350 | 0.817870 | 2.635109e-52 | -8.615850e-47 |
| Msa0795960 | Msa1073350 | 0.802085 | 6.630411e-49 | -8.615850e-47 |
| Msa0799030 | Msa1073350 | 0.813975 | 1.949862e-51 | -8.615850e-47 |
| Msa0810020 | Msa1073350 | 0.904013 | 1.910677e-79 | -8.615850e-47 |
| Msa0812820 | Msa1073350 | 0.838645 | 2.542582e-57 | -8.615850e-47 |
| Msa0820670 | Msa1073350 | 0.805992 | 1.021292e-49 | -8.615850e-47 |
| Msa0822990 | Msa1073350 | 0.846801 | 1.728263e-59 | -8.615850e-47 |
| Msa0837440 | Msa1073350 | 0.827010 | 1.980744e-54 | -8.615850e-47 |
| Msa0837980 | Msa1073350 | 0.812443 | 4.229225e-51 | -8.615850e-47 |
| Msa0130570 | Msa1073350 | 0.817893 | 2.603167e-52 | -8.615850e-47 |
| Msa0134130 | Msa1073350 | 0.825604 | 4.281817e-54 | -8.615850e-47 |
| Msa0148340 | Msa1073350 | 0.834793 | 2.441052e-56 | -8.615850e-47 |
| Msa0149560 | Msa1073350 | 0.888137 | 7.703651e-73 | -8.615850e-47 |
| Msa0153420 | Msa1073350 | 0.832001 | 1.212356e-55 | -8.615850e-47 |
| Msa0161100 | Msa1073350 | 0.803572 | 3.269596e-49 | -8.615850e-47 |
| Msa0176470 | Msa1073350 | 0.820238 | 7.624180e-53 | -8.615850e-47 |
| Msa0191040 | Msa1073350 | 0.861541 | 9.542479e-64 | -8.615850e-47 |
| Msa0203030 | Msa1073350 | 0.804045 | 2.608273e-49 | -8.615850e-47 |
| Msa0203160 | Msa1073350 | 0.834737 | 2.520607e-56 | -8.615850e-47 |
| Msa0205850 | Msa1073350 | 0.803857 | 2.854106e-49 | -8.615850e-47 |
| Msa0206800 | Msa1073350 | 0.834470 | 2.942544e-56 | -8.615850e-47 |
| Msa0208520 | Msa1073350 | 0.832819 | 7.604035e-56 | -8.615850e-47 |
| Msa0219190 | Msa1073350 | 0.873188 | 1.783757e-67 | -8.615850e-47 |
| Msa0233340 | Msa1073350 | 0.862116 | 6.364700e-64 | -8.615850e-47 |
| Msa0235890 | Msa1073350 | 0.854262 | 1.383537e-61 | -8.615850e-47 |
| Msa0236110 | Msa1073350 | 0.816930 | 4.290659e-52 | -8.615850e-47 |
| Msa0236440 | Msa1073350 | 0.803578 | 3.260732e-49 | -8.615850e-47 |
| Msa0366010 | Msa1073350 | 0.815902 | 7.287241e-52 | -8.615850e-47 |
| Msa0370600 | Msa1073350 | 0.808464 | 3.058262e-50 | -8.615850e-47 |
| Msa0371560 | Msa1073350 | 0.820473 | 6.731989e-53 | -8.615850e-47 |
| Msa0374850 | Msa1073350 | 0.803072 | 4.151017e-49 | -8.615850e-47 |
| Msa0375090 | Msa1073350 | 0.802934 | 4.432389e-49 | -8.615850e-47 |
| Msa0382010 | Msa1073350 | 0.822128 | 2.795087e-53 | -8.615850e-47 |
| Msa0382560 | Msa1073350 | 0.808588 | 2.876518e-50 | -8.615850e-47 |
| Msa0408640 | Msa1073350 | 0.803467 | 3.437337e-49 | -8.615850e-47 |
| Msa0413930 | Msa1073350 | 0.865549 | 5.447814e-65 | -8.615850e-47 |
| Msa0418200 | Msa1073350 | 0.819181 | 1.329051e-52 | -8.615850e-47 |
| Msa0420540 | Msa1073350 | 0.807788 | 4.259144e-50 | -8.615850e-47 |
| Msa0426330 | Msa1073350 | 0.848336 | 6.540663e-60 | -8.615850e-47 |
| Msa0436460 | Msa1073350 | 0.827927 | 1.193861e-54 | -8.615850e-47 |
| Msa0436500 | Msa1073350 | 0.818217 | 2.199207e-52 | -8.615850e-47 |
| Msa0444010 | Msa1073350 | 0.817574 | 3.073611e-52 | -8.615850e-47 |
| Msa0458950 | Msa1073350 | 0.835128 | 2.009735e-56 | -8.615850e-47 |
| Msa0464540 | Msa1073350 | 0.818133 | 2.298509e-52 | -8.615850e-47 |
| Msa0470340 | Msa1073350 | 0.802140 | 6.461719e-49 | -8.615850e-47 |
| Msa0476590 | Msa1073350 | 0.808436 | 3.099648e-50 | -8.615850e-47 |
| Msa0988480 | Msa1073350 | 0.835034 | 2.122625e-56 | -8.615850e-47 |
| Msa1002620 | Msa1073350 | 0.818440 | 1.958508e-52 | -8.615850e-47 |
| Msa1018790 | Msa1073350 | 0.831221 | 1.887795e-55 | -8.615850e-47 |
| Msa1032450 | Msa1073350 | 0.822224 | 2.656163e-53 | -8.615850e-47 |
| Msa1033560 | Msa1073350 | 0.916801 | 1.150281e-85 | -8.615850e-47 |
| Msa1037920 | Msa1073350 | 0.828857 | 7.119591e-55 | -8.615850e-47 |
| Msa1042670 | Msa1073350 | 0.815402 | 9.416045e-52 | -8.615850e-47 |
| Msa1055500 | Msa1073350 | 0.847496 | 1.114704e-59 | -8.615850e-47 |
| Msa1072350 | Msa1073350 | 0.801614 | 8.285341e-49 | -8.615850e-47 |
| Msa1073340 | Msa1073350 | 0.891952 | 2.482464e-74 | -8.615850e-47 |
| Msa1073350 | Msa1081570 | 0.813794 | 2.137644e-51 | -8.615850e-47 |
| Msa1073350 | Msa1106810 | 0.827693 | 1.358893e-54 | -8.615850e-47 |
| Msa1073350 | Msa1113850 | 0.902364 | 1.045069e-78 | -8.615850e-47 |
| Msa1073350 | Msa1116930 | 0.822464 | 2.336156e-53 | -8.615850e-47 |
| Msa1073350 | Msa1127140 | 0.809278 | 2.047553e-50 | -8.615850e-47 |
| Msa1073350 | Msa1129980 | 0.822666 | 2.096905e-53 | -8.615850e-47 |
| Msa1073350 | Msa1130690 | 0.800938 | 1.139475e-48 | -8.615850e-47 |
| Msa1073350 | Msa1139810 | 0.805394 | 1.363502e-49 | -8.615850e-47 |
| Msa1073350 | Msa1150230 | 0.801908 | 7.212425e-49 | -8.615850e-47 |
| Msa1073350 | Msa1160400 | 0.921293 | 4.306327e-88 | -8.615850e-47 |
| Msa1073350 | Msa1169990 | 0.817681 | 2.906903e-52 | -8.615850e-47 |
| Msa1073350 | Msa1172590 | 0.830480 | 2.868293e-55 | -8.615850e-47 |
| Msa1073350 | Msa1203000 | 0.803767 | 2.978411e-49 | -8.615850e-47 |
| Msa1073350 | Msa1213060 | 0.808132 | 3.598450e-50 | -8.615850e-47 |
| Msa1073350 | Msa1218480 | 0.882265 | 1.203839e-70 | -8.615850e-47 |
| Msa1073350 | Msa1219260 | 0.800030 | 1.744887e-48 | -8.615850e-47 |
| Msa1073350 | Msa1220230 | 0.804274 | 2.337050e-49 | -8.615850e-47 |
| Msa1073350 | Msa1254190 | 0.816996 | 4.145518e-52 | -8.615850e-47 |
| Msa1073350 | Msa1255280 | 0.804189 | 2.434001e-49 | -8.615850e-47 |
| Msa1073350 | Msa1281720 | 0.833989 | 3.884916e-56 | -8.615850e-47 |
| Msa1073350 | Msa1291870 | 0.813748 | 2.187778e-51 | -8.615850e-47 |
| Msa1073350 | Msa1321000 | 0.853841 | 1.830646e-61 | -8.615850e-47 |
| Msa1073350 | Msa1355400 | 0.815007 | 1.152545e-51 | -8.615850e-47 |
| Msa1073350 | Msa1365200 | 0.816866 | 4.433633e-52 | -8.615850e-47 |
| Msa1073350 | Msa1374440 | 0.819361 | 1.209251e-52 | -8.615850e-47 |
| Msa1073350 | Msa1379990 | 0.844301 | 8.228421e-59 | -8.615850e-47 |
| Msa1073350 | Msa1397340 | 0.809016 | 2.329787e-50 | -8.615850e-47 |
| Msa1073350 | Msa1405180 | 0.817029 | 4.075084e-52 | -8.615850e-47 |
| Msa1073350 | Msa1419010 | 0.823180 | 1.591099e-53 | -8.615850e-47 |
| Msa1073350 | Msa1420060 | 0.889975 | 1.496349e-73 | -8.615850e-47 |
| Msa1073350 | Msa1422270 | 0.811850 | 5.695429e-51 | -8.615850e-47 |
| Msa1073350 | Msa1429420 | 0.881330 | 2.624487e-70 | -8.615850e-47 |
| Msa1073350 | Msa1429830 | 0.807422 | 5.095352e-50 | -8.615850e-47 |
| Msa1073350 | Msa1435670 | 0.831379 | 1.725586e-55 | -8.615850e-47 |
| Msa1073350 | Msa1440340 | 0.899092 | 2.788614e-77 | -8.615850e-47 |
| Msa1073350 | Msa1455620 | 0.803590 | 3.242041e-49 | -8.615850e-47 |
| Msa0251240 | Msa1073350 | 0.804516 | 2.081178e-49 | -8.615850e-47 |
| Msa0271040 | Msa1073350 | 0.807996 | 3.846583e-50 | -8.615850e-47 |
| Msa0288190 | Msa1073350 | 0.835136 | 2.000041e-56 | -8.615850e-47 |
| Msa0288200 | Msa1073350 | 0.837314 | 5.592282e-57 | -8.615850e-47 |
| Msa0298240 | Msa1073350 | 0.858022 | 1.095538e-62 | -8.615850e-47 |
| Msa0309350 | Msa1073350 | 0.816384 | 5.687319e-52 | -8.615850e-47 |
| Msa0311690 | Msa1073350 | 0.868387 | 6.782579e-66 | -8.615850e-47 |
| Msa0314630 | Msa1073350 | 0.813418 | 2.585767e-51 | -8.615850e-47 |
| Msa0315250 | Msa1073350 | 0.814330 | 1.627555e-51 | -8.615850e-47 |
| Msa0326540 | Msa1073350 | 0.848574 | 5.618722e-60 | -8.615850e-47 |
| Msa0331780 | Msa1073350 | 0.826261 | 2.989519e-54 | -8.615850e-47 |
| Msa0336090 | Msa1073350 | 0.814685 | 1.358564e-51 | -8.615850e-47 |
| Msa0341180 | Msa1073350 | 0.812598 | 3.910743e-51 | -8.615850e-47 |
| Msa0484690 | Msa1073350 | 0.817712 | 2.860530e-52 | -8.615850e-47 |
| Msa0520510 | Msa1073350 | 0.855874 | 4.705816e-62 | -8.615850e-47 |
| Msa0525240 | Msa1073350 | 0.822688 | 2.072398e-53 | -8.615850e-47 |
| Msa0531430 | Msa1073350 | 0.817238 | 3.656811e-52 | -8.615850e-47 |
| Msa0534570 | Msa1073350 | 0.824197 | 9.198626e-54 | -8.615850e-47 |
| Msa0534590 | Msa1073350 | 0.849765 | 2.621122e-60 | -8.615850e-47 |
| Msa0557630 | Msa1073350 | 0.822351 | 2.481314e-53 | -8.615850e-47 |
| Msa0571080 | Msa1073350 | 0.806789 | 6.934712e-50 | -8.615850e-47 |
| Msa0590800 | Msa1073350 | 0.835454 | 1.662639e-56 | -8.615850e-47 |
| Msa0850500 | Msa1073350 | 0.873365 | 1.555667e-67 | -8.615850e-47 |
| Msa0853320 | Msa1073350 | 0.867601 | 1.213097e-65 | -8.615850e-47 |
| Msa0862100 | Msa1073350 | 0.871845 | 5.008271e-67 | -8.615850e-47 |
| Msa0870620 | Msa1073350 | 0.819744 | 9.890644e-53 | -8.615850e-47 |
| Msa0870690 | Msa1073350 | 0.829778 | 4.255523e-55 | -8.615850e-47 |
| Msa0872310 | Msa1073350 | 0.824580 | 7.474998e-54 | -8.615850e-47 |
| Msa0873190 | Msa1073350 | 0.852511 | 4.400717e-61 | -8.615850e-47 |
| Msa0880710 | Msa1073350 | 0.888552 | 5.335173e-73 | -8.615850e-47 |
| Msa0885060 | Msa1073350 | 0.836704 | 8.007747e-57 | -8.615850e-47 |
| Msa0886980 | Msa1073350 | 0.814718 | 1.335975e-51 | -8.615850e-47 |
| Msa0905550 | Msa1073350 | 0.836961 | 6.884034e-57 | -8.615850e-47 |
| Msa0937550 | Msa1073350 | 0.823795 | 1.142597e-53 | -8.615850e-47 |
| Msa0938430 | Msa1073350 | 0.800491 | 1.405730e-48 | -8.615850e-47 |
| Msa0941370 | Msa1073350 | 0.802792 | 4.741504e-49 | -8.615850e-47 |
| Msa0946320 | Msa1073350 | 0.805729 | 1.159639e-49 | -8.615850e-47 |
| Msa0951710 | Msa1073350 | 0.834035 | 3.781363e-56 | -8.615850e-47 |
| Msa0974750 | Msa1073350 | 0.816210 | 6.220367e-52 | -8.615850e-47 |
| Msa0975580 | Msa1073350 | 0.834469 | 2.943802e-56 | -8.615850e-47 |
| Msa0979510 | Msa1073350 | 0.817532 | 3.140330e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073350 | MtrunA17_Chr7g0256411 | 71.176 | 170 | 10 | 1 | 1 | 131 | 32 | 201 | 6.86e-67 | 217 |
| Msa1073350 | MtrunA17_Chr7g0256371 | 70.000 | 170 | 12 | 1 | 1 | 131 | 10 | 179 | 1.22e-66 | 216 |
| Msa1073350 | MtrunA17_Chr7g0256391 | 70.000 | 170 | 12 | 1 | 1 | 131 | 1 | 170 | 4.70e-66 | 214 |
| Msa1073350 | MtrunA17_Chr4g0026761 | 65.556 | 180 | 22 | 2 | 1 | 140 | 1 | 180 | 2.38e-63 | 207 |
| Msa1073350 | MtrunA17_Chr4g0026811 | 88.288 | 111 | 13 | 0 | 20 | 130 | 45 | 155 | 2.27e-58 | 191 |
| Msa1073350 | MtrunA17_Chr8g0337081 | 56.977 | 172 | 32 | 1 | 1 | 130 | 1 | 172 | 5.75e-51 | 174 |
| Msa1073350 | MtrunA17_Chr8g0337101 | 56.977 | 172 | 32 | 1 | 1 | 130 | 37 | 208 | 1.79e-49 | 170 |
| Msa1073350 | MtrunA17_Chr4g0073231 | 40.000 | 110 | 66 | 0 | 21 | 130 | 62 | 171 | 1.68e-22 | 95.1 |
| Msa1073350 | MtrunA17_Chr2g0305431 | 36.607 | 112 | 71 | 0 | 19 | 130 | 59 | 170 | 1.24e-21 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073350 | AT1G02205.2 | 55.233 | 172 | 35 | 1 | 1 | 130 | 1 | 172 | 5.40e-51 | 174 |
| Msa1073350 | AT1G02205.3 | 55.233 | 172 | 35 | 1 | 1 | 130 | 1 | 172 | 6.70e-51 | 174 |
| Msa1073350 | AT2G37700.2 | 54.762 | 168 | 38 | 1 | 1 | 130 | 1 | 168 | 1.22e-47 | 163 |
| Msa1073350 | AT2G37700.4 | 54.762 | 168 | 38 | 1 | 1 | 130 | 1 | 168 | 7.41e-47 | 162 |
| Msa1073350 | AT2G37700.1 | 54.762 | 168 | 38 | 1 | 1 | 130 | 1 | 168 | 9.59e-47 | 163 |
| Msa1073350 | AT2G37700.3 | 54.762 | 168 | 38 | 1 | 1 | 130 | 1 | 168 | 1.01e-46 | 163 |
| Msa1073350 | AT1G02190.2 | 55.814 | 172 | 34 | 1 | 1 | 130 | 1 | 172 | 1.44e-46 | 162 |
| Msa1073350 | AT1G02190.1 | 55.814 | 172 | 34 | 1 | 1 | 130 | 1 | 172 | 1.55e-46 | 162 |
| Msa1073350 | AT1G02205.4 | 71.171 | 111 | 32 | 0 | 20 | 130 | 63 | 173 | 1.15e-44 | 157 |
| Msa1073350 | AT5G57800.1 | 38.793 | 116 | 66 | 3 | 20 | 130 | 59 | 174 | 7.04e-18 | 82.0 |
Find 52 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTAACGTAGCCTTTGC+AGG | 0.335053 | 7_2:-70825979 | None:intergenic |
| GGAACCTCTTGGGAGCTTCA+AGG | 0.370784 | 7_2:+70823990 | Msa1073350:CDS |
| GGTTGGATTGACAAATTTGC+AGG | 0.375174 | 7_2:-70825958 | None:intergenic |
| GCATCCTTACAAACTGGCCT+TGG | 0.383922 | 7_2:+70823968 | Msa1073350:CDS |
| GTTCCCAAGGCCAGTTTGTA+AGG | 0.397975 | 7_2:-70823972 | None:intergenic |
| TGTCGACTTGTTCGAATTCG+AGG | 0.398137 | 7_2:-70824536 | None:intergenic |
| TGCAGGCTTTGCAATTTGCC+AGG | 0.402403 | 7_2:-70825941 | None:intergenic |
| TTGCCCCTGGCAAATTTGCC+AGG | 0.411372 | 7_2:-70825811 | None:intergenic |
| GTTTGTAAGGATGCCTGGTT+TGG | 0.415969 | 7_2:-70823959 | None:intergenic |
| GAAAAGATTCTTGTGTAGTC+AGG | 0.427520 | 7_2:+70825869 | Msa1073350:CDS |
| GGCCAGTTTGTAAGGATGCC+TGG | 0.430456 | 7_2:-70823964 | None:intergenic |
| CACAATATGGCTTCCAAACC+AGG | 0.433127 | 7_2:+70823946 | None:intergenic |
| GATAACGAGAGTATAGATAA+TGG | 0.433384 | 7_2:-70825610 | None:intergenic |
| ACTGCACTACTATATTATAT+AGG | 0.453096 | 7_2:+70825461 | Msa1073350:CDS |
| AACCAGGCATCCTTACAAAC+TGG | 0.457232 | 7_2:+70823962 | Msa1073350:CDS |
| AAACTCCTGGCAAATTTGCC+AGG | 0.457537 | 7_2:+70825806 | Msa1073350:CDS |
| GGACGGTACAACACTTTGCC+AGG | 0.461267 | 7_2:+70825899 | Msa1073350:CDS |
| AACTGGCCTTGGGAACCTCT+TGG | 0.461912 | 7_2:+70823979 | Msa1073350:CDS |
| ACTGGCCTTGGGAACCTCTT+GGG | 0.464730 | 7_2:+70823980 | Msa1073350:CDS |
| CATGGTAAATTAGAAGCTAT+AGG | 0.469413 | 7_2:-70825497 | None:intergenic |
| TTGCCAGGACCTCTTGCTCC+TGG | 0.472096 | 7_2:-70825759 | None:intergenic |
| ATGCCAGGAGCAAGAGGTCC+TGG | 0.485203 | 7_2:+70825756 | Msa1073350:CDS |
| CATCCTTACAAACTGGCCTT+GGG | 0.486743 | 7_2:+70823969 | Msa1073350:CDS |
| TCACGCTACCAAACTGCTAA+AGG | 0.490057 | 7_2:+70824489 | Msa1073350:CDS |
| TAGCTCCTGGCAAATTTGCC+AGG | 0.518997 | 7_2:-70825774 | None:intergenic |
| GCAGGCTTTGCAATTTGCCA+GGG | 0.519971 | 7_2:-70825940 | None:intergenic |
| GAGGTCCTGGCAAATTTGCC+AGG | 0.528867 | 7_2:+70825769 | Msa1073350:CDS |
| AATTTGCCAGGAGCTATGCC+AGG | 0.547193 | 7_2:+70825781 | Msa1073350:CDS |
| CAGGCTTTGCAATTTGCCAG+GGG | 0.549060 | 7_2:-70825939 | None:intergenic |
| AAAAGTCGTGGCAAATTGCA+TGG | 0.551413 | 7_2:+70825842 | Msa1073350:CDS |
| CTACAATACAGGCTACATAC+AGG | 0.553431 | 7_2:-70826001 | None:intergenic |
| AAGTCGACAGAGAAACTCAT+TGG | 0.558768 | 7_2:+70824550 | Msa1073350:CDS |
| CTATAGCTTCTAATTTACCA+TGG | 0.560402 | 7_2:+70825498 | Msa1073350:CDS |
| GCTATGCCAGGGAAAACTCC+TGG | 0.564673 | 7_2:+70825793 | Msa1073350:CDS |
| AACTCCTGGCAAATTTGCCA+GGG | 0.567811 | 7_2:+70825807 | Msa1073350:CDS |
| TTTGTCAATCCAACCTGCAA+AGG | 0.568791 | 7_2:+70825966 | Msa1073350:CDS |
| CTTGTGTAGTCAGGAAAAGC+AGG | 0.569981 | 7_2:+70825878 | Msa1073350:CDS |
| TTAACGTAGCCTTTGCAGGT+TGG | 0.570043 | 7_2:-70825975 | None:intergenic |
| CTTACAGCAATATTGCATGC+TGG | 0.570528 | 7_2:+70825542 | Msa1073350:CDS |
| GGATCAATGCCAGGAGCAAG+AGG | 0.578233 | 7_2:+70825750 | Msa1073350:CDS |
| GACGGTACAACACTTTGCCA+GGG | 0.583673 | 7_2:+70825900 | Msa1073350:CDS |
| TTACCATGGTGGAGAACAGA+TGG | 0.597460 | 7_2:+70825512 | Msa1073350:CDS |
| AAGCTCCCAAGAGGTTCCCA+AGG | 0.621015 | 7_2:-70823985 | None:intergenic |
| GCAACCCCTCACAAAAGTCG+TGG | 0.630734 | 7_2:+70825830 | Msa1073350:CDS |
| TAGCTTCTAATTTACCATGG+TGG | 0.631683 | 7_2:+70825501 | Msa1073350:CDS |
| AATATTGCATGCTGGACCAG+TGG | 0.640771 | 7_2:+70825550 | Msa1073350:CDS |
| ACGGTACAACACTTTGCCAG+GGG | 0.666174 | 7_2:+70825901 | Msa1073350:CDS |
| ATTTGCCAGGAGCTATGCCA+GGG | 0.676291 | 7_2:+70825782 | Msa1073350:CDS |
| ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 7_2:-70825515 | None:intergenic |
| AGAACCTTGAAGCTCCCAAG+AGG | 0.687185 | 7_2:-70823994 | None:intergenic |
| TGTAGTCAGGAAAAGCAGGA+CGG | 0.703274 | 7_2:+70825882 | Msa1073350:CDS |
| ACTCCTGGCAAATTTGCCAG+GGG | 0.705336 | 7_2:+70825808 | Msa1073350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATAGAAAAAATAAC+TGG | - | chr7_2:70824204-70824223 | None:intergenic | 10.0% |
| !!! | ACAAAAATCTTTTTAAATAT+GGG | + | chr7_2:70824843-70824862 | Msa1073350:intron | 10.0% |
| !!! | TATTTTAGATATTTTAACTT+GGG | + | chr7_2:70825041-70825060 | Msa1073350:intron | 10.0% |
| !!! | TATGAAAACTTTTTTAAAAA+TGG | + | chr7_2:70825123-70825142 | Msa1073350:intron | 10.0% |
| !! | TATTATATAGAAAAAATAAC+TGG | - | chr7_2:70824204-70824223 | None:intergenic | 10.0% |
| !!! | ACAAAAATCTTTTTAAATAT+GGG | + | chr7_2:70824843-70824862 | Msa1073350:intron | 10.0% |
| !!! | TATTTTAGATATTTTAACTT+GGG | + | chr7_2:70825041-70825060 | Msa1073350:intron | 10.0% |
| !!! | TATGAAAACTTTTTTAAAAA+TGG | + | chr7_2:70825123-70825142 | Msa1073350:intron | 10.0% |
| !! | CATTAAGATATAGAAAATTA+AGG | - | chr7_2:70824130-70824149 | None:intergenic | 15.0% |
| !!! | GACAAAAATCTTTTTAAATA+TGG | + | chr7_2:70824842-70824861 | Msa1073350:intron | 15.0% |
| !! | AATATTACTCTAATAAACTA+TGG | + | chr7_2:70824973-70824992 | Msa1073350:intron | 15.0% |
| !!! | CAAGTTAAAATATCTAAAAT+AGG | - | chr7_2:70825042-70825061 | None:intergenic | 15.0% |
| !!! | CTATTTTAGATATTTTAACT+TGG | + | chr7_2:70825040-70825059 | Msa1073350:intron | 15.0% |
| !!! | TAAAAAATGTTTTTCTTACT+AGG | - | chr7_2:70825198-70825217 | None:intergenic | 15.0% |
| !! | ATTAGAAAATATCAATAATC+AGG | - | chr7_2:70825414-70825433 | None:intergenic | 15.0% |
| !! | CATTAAGATATAGAAAATTA+AGG | - | chr7_2:70824130-70824149 | None:intergenic | 15.0% |
| !!! | GACAAAAATCTTTTTAAATA+TGG | + | chr7_2:70824842-70824861 | Msa1073350:intron | 15.0% |
| !! | AATATTACTCTAATAAACTA+TGG | + | chr7_2:70824973-70824992 | Msa1073350:intron | 15.0% |
| !!! | CAAGTTAAAATATCTAAAAT+AGG | - | chr7_2:70825042-70825061 | None:intergenic | 15.0% |
| !!! | CTATTTTAGATATTTTAACT+TGG | + | chr7_2:70825040-70825059 | Msa1073350:intron | 15.0% |
| !!! | TAAAAAATGTTTTTCTTACT+AGG | - | chr7_2:70825198-70825217 | None:intergenic | 15.0% |
| !! | ATTAGAAAATATCAATAATC+AGG | - | chr7_2:70825414-70825433 | None:intergenic | 15.0% |
| !!! | GTATTTGTTTTTGTGAATAA+GGG | - | chr7_2:70824029-70824048 | None:intergenic | 20.0% |
| !!! | AATTAATGTTGGTTTCATTA+TGG | - | chr7_2:70824161-70824180 | None:intergenic | 20.0% |
| !! | AAACATTACACTAAATATGA+AGG | - | chr7_2:70824258-70824277 | None:intergenic | 20.0% |
| !! | AAAATTGAGCATATCTAAAT+TGG | + | chr7_2:70825235-70825254 | Msa1073350:intron | 20.0% |
| !!! | TGATATTTTCTAATATTTGC+AGG | + | chr7_2:70825420-70825439 | Msa1073350:intron | 20.0% |
| !!! | GATATTTTCTAATATTTGCA+GGG | + | chr7_2:70825421-70825440 | Msa1073350:intron | 20.0% |
| !!! | GTATTTGTTTTTGTGAATAA+GGG | - | chr7_2:70824029-70824048 | None:intergenic | 20.0% |
| !!! | AATTAATGTTGGTTTCATTA+TGG | - | chr7_2:70824161-70824180 | None:intergenic | 20.0% |
| !! | AAACATTACACTAAATATGA+AGG | - | chr7_2:70824258-70824277 | None:intergenic | 20.0% |
| !! | AAAATTGAGCATATCTAAAT+TGG | + | chr7_2:70825235-70825254 | Msa1073350:intron | 20.0% |
| !!! | TGATATTTTCTAATATTTGC+AGG | + | chr7_2:70825420-70825439 | Msa1073350:intron | 20.0% |
| !!! | GATATTTTCTAATATTTGCA+GGG | + | chr7_2:70825421-70825440 | Msa1073350:intron | 20.0% |
| !!! | GGTATTTGTTTTTGTGAATA+AGG | - | chr7_2:70824030-70824049 | None:intergenic | 25.0% |
| ! | AGATATAGAAAATTAAGGTG+AGG | - | chr7_2:70824125-70824144 | None:intergenic | 25.0% |
| ! | ATAGCATATACTCTTTCATA+TGG | + | chr7_2:70824385-70824404 | Msa1073350:intron | 25.0% |
| ! | TAGCATATACTCTTTCATAT+GGG | + | chr7_2:70824386-70824405 | Msa1073350:intron | 25.0% |
| ! | AAAAACAGAATTGTTGACAA+AGG | + | chr7_2:70824513-70824532 | Msa1073350:CDS | 25.0% |
| ! | ACTAAACACAAGATAAAGTA+CGG | + | chr7_2:70824715-70824734 | Msa1073350:intron | 25.0% |
| ! | ATAAACTATGGAAAATGACA+CGG | + | chr7_2:70824985-70825004 | Msa1073350:intron | 25.0% |
| !!! | AGTTTTTTTTAAACCCACTT+GGG | - | chr7_2:70825335-70825354 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTAAACCCACT+TGG | - | chr7_2:70825336-70825355 | None:intergenic | 25.0% |
| ! | ACTGCACTACTATATTATAT+AGG | + | chr7_2:70825461-70825480 | Msa1073350:CDS | 25.0% |
| !!! | GGTATTTGTTTTTGTGAATA+AGG | - | chr7_2:70824030-70824049 | None:intergenic | 25.0% |
| ! | AGATATAGAAAATTAAGGTG+AGG | - | chr7_2:70824125-70824144 | None:intergenic | 25.0% |
| ! | ATAGCATATACTCTTTCATA+TGG | + | chr7_2:70824385-70824404 | Msa1073350:intron | 25.0% |
| ! | TAGCATATACTCTTTCATAT+GGG | + | chr7_2:70824386-70824405 | Msa1073350:intron | 25.0% |
| ! | AAAAACAGAATTGTTGACAA+AGG | + | chr7_2:70824513-70824532 | Msa1073350:CDS | 25.0% |
| ! | ACTAAACACAAGATAAAGTA+CGG | + | chr7_2:70824715-70824734 | Msa1073350:intron | 25.0% |
| ! | ATAAACTATGGAAAATGACA+CGG | + | chr7_2:70824985-70825004 | Msa1073350:intron | 25.0% |
| !!! | AGTTTTTTTTAAACCCACTT+GGG | - | chr7_2:70825335-70825354 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTAAACCCACT+TGG | - | chr7_2:70825336-70825355 | None:intergenic | 25.0% |
| ! | ACTGCACTACTATATTATAT+AGG | + | chr7_2:70825461-70825480 | Msa1073350:CDS | 25.0% |
| AAATTAAGGTGAGGTAACAT+TGG | - | chr7_2:70824116-70824135 | None:intergenic | 30.0% | |
| ACTGGTAAAAATAAACGACT+TGG | - | chr7_2:70824186-70824205 | None:intergenic | 30.0% | |
| ! | TCTTTTTCTTCTATGTGACT+TGG | + | chr7_2:70824315-70824334 | Msa1073350:intron | 30.0% |
| AGCATATACTCTTTCATATG+GGG | + | chr7_2:70824387-70824406 | Msa1073350:intron | 30.0% | |
| ATACAAAAGGGAATATGACA+TGG | - | chr7_2:70824431-70824450 | None:intergenic | 30.0% | |
| ! | TGTCATATTCCCTTTTGTAT+TGG | + | chr7_2:70824431-70824450 | Msa1073350:intron | 30.0% |
| ! | AGATAAAGTACGGTATTTTG+TGG | + | chr7_2:70824725-70824744 | Msa1073350:intron | 30.0% |
| ! | GATAAAGTACGGTATTTTGT+GGG | + | chr7_2:70824726-70824745 | Msa1073350:intron | 30.0% |
| TATAGACAAAAACACCTGAA+AGG | - | chr7_2:70824812-70824831 | None:intergenic | 30.0% | |
| !! | GCTAGTTTGTTACAACTTAT+TGG | - | chr7_2:70825174-70825193 | None:intergenic | 30.0% |
| CATGGTAAATTAGAAGCTAT+AGG | - | chr7_2:70825500-70825519 | None:intergenic | 30.0% | |
| CTATAGCTTCTAATTTACCA+TGG | + | chr7_2:70825498-70825517 | Msa1073350:CDS | 30.0% | |
| CAATAGTATAAAAACTCCAC+TGG | - | chr7_2:70825569-70825588 | None:intergenic | 30.0% | |
| ! | CAGTGGAGTTTTTATACTAT+TGG | + | chr7_2:70825567-70825586 | Msa1073350:CDS | 30.0% |
| ! | GATAACGAGAGTATAGATAA+TGG | - | chr7_2:70825613-70825632 | None:intergenic | 30.0% |
| AAATTAAGGTGAGGTAACAT+TGG | - | chr7_2:70824116-70824135 | None:intergenic | 30.0% | |
| ACTGGTAAAAATAAACGACT+TGG | - | chr7_2:70824186-70824205 | None:intergenic | 30.0% | |
| ! | TCTTTTTCTTCTATGTGACT+TGG | + | chr7_2:70824315-70824334 | Msa1073350:intron | 30.0% |
| AGCATATACTCTTTCATATG+GGG | + | chr7_2:70824387-70824406 | Msa1073350:intron | 30.0% | |
| ATACAAAAGGGAATATGACA+TGG | - | chr7_2:70824431-70824450 | None:intergenic | 30.0% | |
| ! | TGTCATATTCCCTTTTGTAT+TGG | + | chr7_2:70824431-70824450 | Msa1073350:intron | 30.0% |
| ! | AGATAAAGTACGGTATTTTG+TGG | + | chr7_2:70824725-70824744 | Msa1073350:intron | 30.0% |
| ! | GATAAAGTACGGTATTTTGT+GGG | + | chr7_2:70824726-70824745 | Msa1073350:intron | 30.0% |
| TATAGACAAAAACACCTGAA+AGG | - | chr7_2:70824812-70824831 | None:intergenic | 30.0% | |
| !! | GCTAGTTTGTTACAACTTAT+TGG | - | chr7_2:70825174-70825193 | None:intergenic | 30.0% |
| CATGGTAAATTAGAAGCTAT+AGG | - | chr7_2:70825500-70825519 | None:intergenic | 30.0% | |
| CTATAGCTTCTAATTTACCA+TGG | + | chr7_2:70825498-70825517 | Msa1073350:CDS | 30.0% | |
| CAATAGTATAAAAACTCCAC+TGG | - | chr7_2:70825569-70825588 | None:intergenic | 30.0% | |
| ! | CAGTGGAGTTTTTATACTAT+TGG | + | chr7_2:70825567-70825586 | Msa1073350:CDS | 30.0% |
| ! | GATAACGAGAGTATAGATAA+TGG | - | chr7_2:70825613-70825632 | None:intergenic | 30.0% |
| TTTAGAGAGTGAGAAAGAGA+AGG | - | chr7_2:70824056-70824075 | None:intergenic | 35.0% | |
| ! | ACGACTTGGACAATTAATGT+TGG | - | chr7_2:70824172-70824191 | None:intergenic | 35.0% |
| !! | TCTTCTATGTGACTTGGTTA+TGG | + | chr7_2:70824321-70824340 | Msa1073350:intron | 35.0% |
| ATATGCTATGAGCAATCCAT+GGG | - | chr7_2:70824374-70824393 | None:intergenic | 35.0% | |
| TATATGCTATGAGCAATCCA+TGG | - | chr7_2:70824375-70824394 | None:intergenic | 35.0% | |
| GCATTCTGACCAATACAAAA+GGG | - | chr7_2:70824443-70824462 | None:intergenic | 35.0% | |
| AGCATTCTGACCAATACAAA+AGG | - | chr7_2:70824444-70824463 | None:intergenic | 35.0% | |
| GAATGCTACACAATCAGATT+TGG | + | chr7_2:70824457-70824476 | Msa1073350:intron | 35.0% | |
| !! | TGTTTTTGCCTTTAGCAGTT+TGG | - | chr7_2:70824500-70824519 | None:intergenic | 35.0% |
| TAGCTTCTAATTTACCATGG+TGG | + | chr7_2:70825501-70825520 | Msa1073350:CDS | 35.0% | |
| ! | AAGAATTCTTGCATTTTGCC+AGG | + | chr7_2:70825728-70825747 | Msa1073350:intron | 35.0% |
| ! | AGAATTCTTGCATTTTGCCA+GGG | + | chr7_2:70825729-70825748 | Msa1073350:intron | 35.0% |
| GAAAAGATTCTTGTGTAGTC+AGG | + | chr7_2:70825869-70825888 | Msa1073350:CDS | 35.0% | |
| TTTAGAGAGTGAGAAAGAGA+AGG | - | chr7_2:70824056-70824075 | None:intergenic | 35.0% | |
| ! | ACGACTTGGACAATTAATGT+TGG | - | chr7_2:70824172-70824191 | None:intergenic | 35.0% |
| !! | TCTTCTATGTGACTTGGTTA+TGG | + | chr7_2:70824321-70824340 | Msa1073350:intron | 35.0% |
| ATATGCTATGAGCAATCCAT+GGG | - | chr7_2:70824374-70824393 | None:intergenic | 35.0% | |
| TATATGCTATGAGCAATCCA+TGG | - | chr7_2:70824375-70824394 | None:intergenic | 35.0% | |
| GCATTCTGACCAATACAAAA+GGG | - | chr7_2:70824443-70824462 | None:intergenic | 35.0% | |
| AGCATTCTGACCAATACAAA+AGG | - | chr7_2:70824444-70824463 | None:intergenic | 35.0% | |
| GAATGCTACACAATCAGATT+TGG | + | chr7_2:70824457-70824476 | Msa1073350:intron | 35.0% | |
| !! | TGTTTTTGCCTTTAGCAGTT+TGG | - | chr7_2:70824500-70824519 | None:intergenic | 35.0% |
| TAGCTTCTAATTTACCATGG+TGG | + | chr7_2:70825501-70825520 | Msa1073350:CDS | 35.0% | |
| ! | AAGAATTCTTGCATTTTGCC+AGG | + | chr7_2:70825728-70825747 | Msa1073350:intron | 35.0% |
| ! | AGAATTCTTGCATTTTGCCA+GGG | + | chr7_2:70825729-70825748 | Msa1073350:intron | 35.0% |
| GAAAAGATTCTTGTGTAGTC+AGG | + | chr7_2:70825869-70825888 | Msa1073350:CDS | 35.0% | |
| TAAGGTGAGGTAACATTGGA+GGG | - | chr7_2:70824112-70824131 | None:intergenic | 40.0% | |
| TTAAGGTGAGGTAACATTGG+AGG | - | chr7_2:70824113-70824132 | None:intergenic | 40.0% | |
| AGTTCATGATTCTAAGCCCA+TGG | + | chr7_2:70824355-70824374 | Msa1073350:intron | 40.0% | |
| ACTCTTTCATATGGGGTGAA+AGG | + | chr7_2:70824394-70824413 | Msa1073350:intron | 40.0% | |
| CTCTTTCATATGGGGTGAAA+GGG | + | chr7_2:70824395-70824414 | Msa1073350:intron | 40.0% | |
| AAGTCGACAGAGAAACTCAT+TGG | + | chr7_2:70824550-70824569 | Msa1073350:CDS | 40.0% | |
| TGGCCTCCTAAGCTTATATT+TGG | + | chr7_2:70824781-70824800 | Msa1073350:intron | 40.0% | |
| GCACCAAATATAAGCTTAGG+AGG | - | chr7_2:70824787-70824806 | None:intergenic | 40.0% | |
| GTGGCACCAAATATAAGCTT+AGG | - | chr7_2:70824790-70824809 | None:intergenic | 40.0% | |
| !! | TATATTTGGTGCCACCTTTC+AGG | + | chr7_2:70824795-70824814 | Msa1073350:intron | 40.0% |
| AGACAAAAACACCTGAAAGG+TGG | - | chr7_2:70824809-70824828 | None:intergenic | 40.0% | |
| TATGGAAAATGACACGGAGT+TGG | + | chr7_2:70824991-70825010 | Msa1073350:intron | 40.0% | |
| ATGGAAAATGACACGGAGTT+GGG | + | chr7_2:70824992-70825011 | Msa1073350:intron | 40.0% | |
| CTTACAGCAATATTGCATGC+TGG | + | chr7_2:70825542-70825561 | Msa1073350:CDS | 40.0% | |
| AAAAAGCTCATACACGTGAC+AGG | - | chr7_2:70825668-70825687 | None:intergenic | 40.0% | |
| ! | ATTTGCCACGACTTTTGTGA+GGG | - | chr7_2:70825838-70825857 | None:intergenic | 40.0% |
| ! | AATTTGCCACGACTTTTGTG+AGG | - | chr7_2:70825839-70825858 | None:intergenic | 40.0% |
| AAAAGTCGTGGCAAATTGCA+TGG | + | chr7_2:70825842-70825861 | Msa1073350:CDS | 40.0% | |
| GGTTGGATTGACAAATTTGC+AGG | - | chr7_2:70825961-70825980 | None:intergenic | 40.0% | |
| TTTGTCAATCCAACCTGCAA+AGG | + | chr7_2:70825966-70825985 | Msa1073350:CDS | 40.0% | |
| TAAGGTGAGGTAACATTGGA+GGG | - | chr7_2:70824112-70824131 | None:intergenic | 40.0% | |
| TTAAGGTGAGGTAACATTGG+AGG | - | chr7_2:70824113-70824132 | None:intergenic | 40.0% | |
| AGTTCATGATTCTAAGCCCA+TGG | + | chr7_2:70824355-70824374 | Msa1073350:intron | 40.0% | |
| ACTCTTTCATATGGGGTGAA+AGG | + | chr7_2:70824394-70824413 | Msa1073350:intron | 40.0% | |
| CTCTTTCATATGGGGTGAAA+GGG | + | chr7_2:70824395-70824414 | Msa1073350:intron | 40.0% | |
| AAGTCGACAGAGAAACTCAT+TGG | + | chr7_2:70824550-70824569 | Msa1073350:CDS | 40.0% | |
| TGGCCTCCTAAGCTTATATT+TGG | + | chr7_2:70824781-70824800 | Msa1073350:intron | 40.0% | |
| GCACCAAATATAAGCTTAGG+AGG | - | chr7_2:70824787-70824806 | None:intergenic | 40.0% | |
| GTGGCACCAAATATAAGCTT+AGG | - | chr7_2:70824790-70824809 | None:intergenic | 40.0% | |
| !! | TATATTTGGTGCCACCTTTC+AGG | + | chr7_2:70824795-70824814 | Msa1073350:intron | 40.0% |
| AGACAAAAACACCTGAAAGG+TGG | - | chr7_2:70824809-70824828 | None:intergenic | 40.0% | |
| TATGGAAAATGACACGGAGT+TGG | + | chr7_2:70824991-70825010 | Msa1073350:intron | 40.0% | |
| ATGGAAAATGACACGGAGTT+GGG | + | chr7_2:70824992-70825011 | Msa1073350:intron | 40.0% | |
| CTTACAGCAATATTGCATGC+TGG | + | chr7_2:70825542-70825561 | Msa1073350:CDS | 40.0% | |
| AAAAAGCTCATACACGTGAC+AGG | - | chr7_2:70825668-70825687 | None:intergenic | 40.0% | |
| ! | ATTTGCCACGACTTTTGTGA+GGG | - | chr7_2:70825838-70825857 | None:intergenic | 40.0% |
| ! | AATTTGCCACGACTTTTGTG+AGG | - | chr7_2:70825839-70825858 | None:intergenic | 40.0% |
| AAAAGTCGTGGCAAATTGCA+TGG | + | chr7_2:70825842-70825861 | Msa1073350:CDS | 40.0% | |
| GGTTGGATTGACAAATTTGC+AGG | - | chr7_2:70825961-70825980 | None:intergenic | 40.0% | |
| TTTGTCAATCCAACCTGCAA+AGG | + | chr7_2:70825966-70825985 | Msa1073350:CDS | 40.0% | |
| GTTTGTAAGGATGCCTGGTT+TGG | - | chr7_2:70823962-70823981 | None:intergenic | 45.0% | |
| AACCAGGCATCCTTACAAAC+TGG | + | chr7_2:70823962-70823981 | Msa1073350:CDS | 45.0% | |
| !! | CATCCTTACAAACTGGCCTT+GGG | + | chr7_2:70823969-70823988 | Msa1073350:CDS | 45.0% |
| AGAGTGAGAAAGAGAAGGAG+AGG | - | chr7_2:70824051-70824070 | None:intergenic | 45.0% | |
| GGGAATATGACATGGTACAC+TGG | - | chr7_2:70824423-70824442 | None:intergenic | 45.0% | |
| TCACGCTACCAAACTGCTAA+AGG | + | chr7_2:70824489-70824508 | Msa1073350:CDS | 45.0% | |
| !! | TGTCGACTTGTTCGAATTCG+AGG | - | chr7_2:70824539-70824558 | None:intergenic | 45.0% |
| ! | ACGGTATTTTGTGGGTGCTT+TGG | + | chr7_2:70824734-70824753 | Msa1073350:intron | 45.0% |
| !! | TGGTGTTGTTTGGTGCTTTG+TGG | + | chr7_2:70824754-70824773 | Msa1073350:intron | 45.0% |
| !! | GGTGTTGTTTGGTGCTTTGT+GGG | + | chr7_2:70824755-70824774 | Msa1073350:intron | 45.0% |
| !!! | GTTTGGTGCTTTGTGGGTTT+TGG | + | chr7_2:70824761-70824780 | Msa1073350:intron | 45.0% |
| ! | AAATTGAGTCTGAGACCTCG+AGG | + | chr7_2:70825267-70825286 | Msa1073350:intron | 45.0% |
| TGACCTGGTGGTATTTGCTT+GGG | - | chr7_2:70825311-70825330 | None:intergenic | 45.0% | |
| TTGACCTGGTGGTATTTGCT+TGG | - | chr7_2:70825312-70825331 | None:intergenic | 45.0% | |
| ! | TTACCATGGTGGAGAACAGA+TGG | + | chr7_2:70825512-70825531 | Msa1073350:CDS | 45.0% |
| AATATTGCATGCTGGACCAG+TGG | + | chr7_2:70825550-70825569 | Msa1073350:CDS | 45.0% | |
| ! | AATTTGCCAGGAGTTTTCCC+TGG | - | chr7_2:70825802-70825821 | None:intergenic | 45.0% |
| AAACTCCTGGCAAATTTGCC+AGG | + | chr7_2:70825806-70825825 | Msa1073350:CDS | 45.0% | |
| AACTCCTGGCAAATTTGCCA+GGG | + | chr7_2:70825807-70825826 | Msa1073350:CDS | 45.0% | |
| ! | TTTGCCACGACTTTTGTGAG+GGG | - | chr7_2:70825837-70825856 | None:intergenic | 45.0% |
| CTTGTGTAGTCAGGAAAAGC+AGG | + | chr7_2:70825878-70825897 | Msa1073350:CDS | 45.0% | |
| TGTAGTCAGGAAAAGCAGGA+CGG | + | chr7_2:70825882-70825901 | Msa1073350:CDS | 45.0% | |
| !! | AATTTGCCAGGGGTTTTTGG+TGG | - | chr7_2:70825932-70825951 | None:intergenic | 45.0% |
| ! | TGCAATTTGCCAGGGGTTTT+TGG | - | chr7_2:70825935-70825954 | None:intergenic | 45.0% |
| TTAACGTAGCCTTTGCAGGT+TGG | - | chr7_2:70825978-70825997 | None:intergenic | 45.0% | |
| GCTATTAACGTAGCCTTTGC+AGG | - | chr7_2:70825982-70826001 | None:intergenic | 45.0% | |
| GTTTGTAAGGATGCCTGGTT+TGG | - | chr7_2:70823962-70823981 | None:intergenic | 45.0% | |
| AACCAGGCATCCTTACAAAC+TGG | + | chr7_2:70823962-70823981 | Msa1073350:CDS | 45.0% | |
| !! | CATCCTTACAAACTGGCCTT+GGG | + | chr7_2:70823969-70823988 | Msa1073350:CDS | 45.0% |
| AGAGTGAGAAAGAGAAGGAG+AGG | - | chr7_2:70824051-70824070 | None:intergenic | 45.0% | |
| GGGAATATGACATGGTACAC+TGG | - | chr7_2:70824423-70824442 | None:intergenic | 45.0% | |
| TCACGCTACCAAACTGCTAA+AGG | + | chr7_2:70824489-70824508 | Msa1073350:CDS | 45.0% | |
| !! | TGTCGACTTGTTCGAATTCG+AGG | - | chr7_2:70824539-70824558 | None:intergenic | 45.0% |
| ! | ACGGTATTTTGTGGGTGCTT+TGG | + | chr7_2:70824734-70824753 | Msa1073350:intron | 45.0% |
| !! | TGGTGTTGTTTGGTGCTTTG+TGG | + | chr7_2:70824754-70824773 | Msa1073350:intron | 45.0% |
| !! | GGTGTTGTTTGGTGCTTTGT+GGG | + | chr7_2:70824755-70824774 | Msa1073350:intron | 45.0% |
| !!! | GTTTGGTGCTTTGTGGGTTT+TGG | + | chr7_2:70824761-70824780 | Msa1073350:intron | 45.0% |
| ! | AAATTGAGTCTGAGACCTCG+AGG | + | chr7_2:70825267-70825286 | Msa1073350:intron | 45.0% |
| TGACCTGGTGGTATTTGCTT+GGG | - | chr7_2:70825311-70825330 | None:intergenic | 45.0% | |
| TTGACCTGGTGGTATTTGCT+TGG | - | chr7_2:70825312-70825331 | None:intergenic | 45.0% | |
| ! | TTACCATGGTGGAGAACAGA+TGG | + | chr7_2:70825512-70825531 | Msa1073350:CDS | 45.0% |
| AATATTGCATGCTGGACCAG+TGG | + | chr7_2:70825550-70825569 | Msa1073350:CDS | 45.0% | |
| ! | AATTTGCCAGGAGTTTTCCC+TGG | - | chr7_2:70825802-70825821 | None:intergenic | 45.0% |
| AAACTCCTGGCAAATTTGCC+AGG | + | chr7_2:70825806-70825825 | Msa1073350:CDS | 45.0% | |
| AACTCCTGGCAAATTTGCCA+GGG | + | chr7_2:70825807-70825826 | Msa1073350:CDS | 45.0% | |
| ! | TTTGCCACGACTTTTGTGAG+GGG | - | chr7_2:70825837-70825856 | None:intergenic | 45.0% |
| CTTGTGTAGTCAGGAAAAGC+AGG | + | chr7_2:70825878-70825897 | Msa1073350:CDS | 45.0% | |
| TGTAGTCAGGAAAAGCAGGA+CGG | + | chr7_2:70825882-70825901 | Msa1073350:CDS | 45.0% | |
| !! | AATTTGCCAGGGGTTTTTGG+TGG | - | chr7_2:70825932-70825951 | None:intergenic | 45.0% |
| ! | TGCAATTTGCCAGGGGTTTT+TGG | - | chr7_2:70825935-70825954 | None:intergenic | 45.0% |
| TTAACGTAGCCTTTGCAGGT+TGG | - | chr7_2:70825978-70825997 | None:intergenic | 45.0% | |
| GCTATTAACGTAGCCTTTGC+AGG | - | chr7_2:70825982-70826001 | None:intergenic | 45.0% | |
| !! | ATATATATAATCTTTAATTA+AGG | - | chr7_2:70824612-70824631 | None:intergenic | 5.0% |
| !! | ATATATATAATCTTTAATTA+AGG | - | chr7_2:70824612-70824631 | None:intergenic | 5.0% |
| ! | GCATCCTTACAAACTGGCCT+TGG | + | chr7_2:70823968-70823987 | Msa1073350:CDS | 50.0% |
| GTTCCCAAGGCCAGTTTGTA+AGG | - | chr7_2:70823975-70823994 | None:intergenic | 50.0% | |
| AGAACCTTGAAGCTCCCAAG+AGG | - | chr7_2:70823997-70824016 | None:intergenic | 50.0% | |
| !! | GTGGGTGCTTTGGTGTTGTT+TGG | + | chr7_2:70824744-70824763 | Msa1073350:intron | 50.0% |
| GAAAATGACACGGAGTTGGG+TGG | + | chr7_2:70824995-70825014 | Msa1073350:intron | 50.0% | |
| TAGTAATGTGCTCCTCCTCG+AGG | - | chr7_2:70825285-70825304 | None:intergenic | 50.0% | |
| AGTCCCAAGCAAATACCACC+AGG | + | chr7_2:70825305-70825324 | Msa1073350:intron | 50.0% | |
| !! | TAAACCCACTTGGGTTGACC+TGG | - | chr7_2:70825326-70825345 | None:intergenic | 50.0% |
| ACACCATCTGTTCTCCACCA+TGG | - | chr7_2:70825518-70825537 | None:intergenic | 50.0% | |
| ! | TTTTGCCAGGGATCAATGCC+AGG | + | chr7_2:70825741-70825760 | Msa1073350:intron | 50.0% |
| TAGCTCCTGGCAAATTTGCC+AGG | - | chr7_2:70825777-70825796 | None:intergenic | 50.0% | |
| AATTTGCCAGGAGCTATGCC+AGG | + | chr7_2:70825781-70825800 | Msa1073350:CDS | 50.0% | |
| ATTTGCCAGGAGCTATGCCA+GGG | + | chr7_2:70825782-70825801 | Msa1073350:CDS | 50.0% | |
| ACTCCTGGCAAATTTGCCAG+GGG | + | chr7_2:70825808-70825827 | Msa1073350:CDS | 50.0% | |
| GACGGTACAACACTTTGCCA+GGG | + | chr7_2:70825900-70825919 | Msa1073350:CDS | 50.0% | |
| ACGGTACAACACTTTGCCAG+GGG | + | chr7_2:70825901-70825920 | Msa1073350:CDS | 50.0% | |
| !!! | GTTTTTGGTGGCATAACCCC+TGG | - | chr7_2:70825920-70825939 | None:intergenic | 50.0% |
| GTTATGCCACCAAAAACCCC+TGG | + | chr7_2:70825923-70825942 | Msa1073350:CDS | 50.0% | |
| CAGGCTTTGCAATTTGCCAG+GGG | - | chr7_2:70825942-70825961 | None:intergenic | 50.0% | |
| GCAGGCTTTGCAATTTGCCA+GGG | - | chr7_2:70825943-70825962 | None:intergenic | 50.0% | |
| TGCAGGCTTTGCAATTTGCC+AGG | - | chr7_2:70825944-70825963 | None:intergenic | 50.0% | |
| ! | GCATCCTTACAAACTGGCCT+TGG | + | chr7_2:70823968-70823987 | Msa1073350:CDS | 50.0% |
| GTTCCCAAGGCCAGTTTGTA+AGG | - | chr7_2:70823975-70823994 | None:intergenic | 50.0% | |
| AGAACCTTGAAGCTCCCAAG+AGG | - | chr7_2:70823997-70824016 | None:intergenic | 50.0% | |
| !! | GTGGGTGCTTTGGTGTTGTT+TGG | + | chr7_2:70824744-70824763 | Msa1073350:intron | 50.0% |
| GAAAATGACACGGAGTTGGG+TGG | + | chr7_2:70824995-70825014 | Msa1073350:intron | 50.0% | |
| TAGTAATGTGCTCCTCCTCG+AGG | - | chr7_2:70825285-70825304 | None:intergenic | 50.0% | |
| AGTCCCAAGCAAATACCACC+AGG | + | chr7_2:70825305-70825324 | Msa1073350:intron | 50.0% | |
| !! | TAAACCCACTTGGGTTGACC+TGG | - | chr7_2:70825326-70825345 | None:intergenic | 50.0% |
| ACACCATCTGTTCTCCACCA+TGG | - | chr7_2:70825518-70825537 | None:intergenic | 50.0% | |
| ! | TTTTGCCAGGGATCAATGCC+AGG | + | chr7_2:70825741-70825760 | Msa1073350:intron | 50.0% |
| TAGCTCCTGGCAAATTTGCC+AGG | - | chr7_2:70825777-70825796 | None:intergenic | 50.0% | |
| AATTTGCCAGGAGCTATGCC+AGG | + | chr7_2:70825781-70825800 | Msa1073350:CDS | 50.0% | |
| ATTTGCCAGGAGCTATGCCA+GGG | + | chr7_2:70825782-70825801 | Msa1073350:CDS | 50.0% | |
| ACTCCTGGCAAATTTGCCAG+GGG | + | chr7_2:70825808-70825827 | Msa1073350:CDS | 50.0% | |
| GACGGTACAACACTTTGCCA+GGG | + | chr7_2:70825900-70825919 | Msa1073350:CDS | 50.0% | |
| ACGGTACAACACTTTGCCAG+GGG | + | chr7_2:70825901-70825920 | Msa1073350:CDS | 50.0% | |
| !!! | GTTTTTGGTGGCATAACCCC+TGG | - | chr7_2:70825920-70825939 | None:intergenic | 50.0% |
| GTTATGCCACCAAAAACCCC+TGG | + | chr7_2:70825923-70825942 | Msa1073350:CDS | 50.0% | |
| CAGGCTTTGCAATTTGCCAG+GGG | - | chr7_2:70825942-70825961 | None:intergenic | 50.0% | |
| GCAGGCTTTGCAATTTGCCA+GGG | - | chr7_2:70825943-70825962 | None:intergenic | 50.0% | |
| TGCAGGCTTTGCAATTTGCC+AGG | - | chr7_2:70825944-70825963 | None:intergenic | 50.0% | |
| GGCCAGTTTGTAAGGATGCC+TGG | - | chr7_2:70823967-70823986 | None:intergenic | 55.0% | |
| !! | AACTGGCCTTGGGAACCTCT+TGG | + | chr7_2:70823979-70823998 | Msa1073350:CDS | 55.0% |
| !! | ACTGGCCTTGGGAACCTCTT+GGG | + | chr7_2:70823980-70823999 | Msa1073350:CDS | 55.0% |
| AAGCTCCCAAGAGGTTCCCA+AGG | - | chr7_2:70823988-70824007 | None:intergenic | 55.0% | |
| GGAACCTCTTGGGAGCTTCA+AGG | + | chr7_2:70823990-70824009 | Msa1073350:CDS | 55.0% | |
| ATGACACGGAGTTGGGTGGT+TGG | + | chr7_2:70824999-70825018 | Msa1073350:intron | 55.0% | |
| ! | TTGAGTCTGAGACCTCGAGG+AGG | + | chr7_2:70825270-70825289 | Msa1073350:intron | 55.0% |
| TACCACCAGGTCAACCCAAG+TGG | + | chr7_2:70825318-70825337 | Msa1073350:intron | 55.0% | |
| ACCACCAGGTCAACCCAAGT+GGG | + | chr7_2:70825319-70825338 | Msa1073350:intron | 55.0% | |
| !! | TTGCTCCTGGCATTGATCCC+TGG | - | chr7_2:70825749-70825768 | None:intergenic | 55.0% |
| GGATCAATGCCAGGAGCAAG+AGG | + | chr7_2:70825750-70825769 | Msa1073350:CDS | 55.0% | |
| GAGGTCCTGGCAAATTTGCC+AGG | + | chr7_2:70825769-70825788 | Msa1073350:CDS | 55.0% | |
| ! | GTTTTCCCTGGCATAGCTCC+TGG | - | chr7_2:70825790-70825809 | None:intergenic | 55.0% |
| GCTATGCCAGGGAAAACTCC+TGG | + | chr7_2:70825793-70825812 | Msa1073350:CDS | 55.0% | |
| TTGCCCCTGGCAAATTTGCC+AGG | - | chr7_2:70825814-70825833 | None:intergenic | 55.0% | |
| GCAACCCCTCACAAAAGTCG+TGG | + | chr7_2:70825830-70825849 | Msa1073350:CDS | 55.0% | |
| GGACGGTACAACACTTTGCC+AGG | + | chr7_2:70825899-70825918 | Msa1073350:CDS | 55.0% | |
| GGCCAGTTTGTAAGGATGCC+TGG | - | chr7_2:70823967-70823986 | None:intergenic | 55.0% | |
| !! | AACTGGCCTTGGGAACCTCT+TGG | + | chr7_2:70823979-70823998 | Msa1073350:CDS | 55.0% |
| !! | ACTGGCCTTGGGAACCTCTT+GGG | + | chr7_2:70823980-70823999 | Msa1073350:CDS | 55.0% |
| AAGCTCCCAAGAGGTTCCCA+AGG | - | chr7_2:70823988-70824007 | None:intergenic | 55.0% | |
| GGAACCTCTTGGGAGCTTCA+AGG | + | chr7_2:70823990-70824009 | Msa1073350:CDS | 55.0% | |
| ATGACACGGAGTTGGGTGGT+TGG | + | chr7_2:70824999-70825018 | Msa1073350:intron | 55.0% | |
| ! | TTGAGTCTGAGACCTCGAGG+AGG | + | chr7_2:70825270-70825289 | Msa1073350:intron | 55.0% |
| TACCACCAGGTCAACCCAAG+TGG | + | chr7_2:70825318-70825337 | Msa1073350:intron | 55.0% | |
| ACCACCAGGTCAACCCAAGT+GGG | + | chr7_2:70825319-70825338 | Msa1073350:intron | 55.0% | |
| !! | TTGCTCCTGGCATTGATCCC+TGG | - | chr7_2:70825749-70825768 | None:intergenic | 55.0% |
| GGATCAATGCCAGGAGCAAG+AGG | + | chr7_2:70825750-70825769 | Msa1073350:CDS | 55.0% | |
| GAGGTCCTGGCAAATTTGCC+AGG | + | chr7_2:70825769-70825788 | Msa1073350:CDS | 55.0% | |
| ! | GTTTTCCCTGGCATAGCTCC+TGG | - | chr7_2:70825790-70825809 | None:intergenic | 55.0% |
| GCTATGCCAGGGAAAACTCC+TGG | + | chr7_2:70825793-70825812 | Msa1073350:CDS | 55.0% | |
| TTGCCCCTGGCAAATTTGCC+AGG | - | chr7_2:70825814-70825833 | None:intergenic | 55.0% | |
| GCAACCCCTCACAAAAGTCG+TGG | + | chr7_2:70825830-70825849 | Msa1073350:CDS | 55.0% | |
| GGACGGTACAACACTTTGCC+AGG | + | chr7_2:70825899-70825918 | Msa1073350:CDS | 55.0% | |
| !! | ACCCACTTGGGTTGACCTGG+TGG | - | chr7_2:70825323-70825342 | None:intergenic | 60.0% |
| ATGCCAGGAGCAAGAGGTCC+TGG | + | chr7_2:70825756-70825775 | Msa1073350:CDS | 60.0% | |
| TTGCCAGGACCTCTTGCTCC+TGG | - | chr7_2:70825762-70825781 | None:intergenic | 60.0% | |
| ! | CTTTTGTGAGGGGTTGCCCC+TGG | - | chr7_2:70825827-70825846 | None:intergenic | 60.0% |
| !! | ACCCACTTGGGTTGACCTGG+TGG | - | chr7_2:70825323-70825342 | None:intergenic | 60.0% |
| ATGCCAGGAGCAAGAGGTCC+TGG | + | chr7_2:70825756-70825775 | Msa1073350:CDS | 60.0% | |
| TTGCCAGGACCTCTTGCTCC+TGG | - | chr7_2:70825762-70825781 | None:intergenic | 60.0% | |
| ! | CTTTTGTGAGGGGTTGCCCC+TGG | - | chr7_2:70825827-70825846 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 70823952 | 70826011 | 70823952 | ID=Msa1073350;Name=Msa1073350 |
| chr7_2 | mRNA | 70823952 | 70826011 | 70823952 | ID=Msa1073350-mRNA-1;Parent=Msa1073350;Name=Msa1073350-mRNA-1;_AED=0.65;_eAED=0.65;_QI=0|0|0|0.75|1|1|4|0|216 |
| chr7_2 | exon | 70823952 | 70824011 | 70823952 | ID=Msa1073350-mRNA-1:exon:16031;Parent=Msa1073350-mRNA-1 |
| chr7_2 | exon | 70824474 | 70824571 | 70824474 | ID=Msa1073350-mRNA-1:exon:16032;Parent=Msa1073350-mRNA-1 |
| chr7_2 | exon | 70825442 | 70825672 | 70825442 | ID=Msa1073350-mRNA-1:exon:16033;Parent=Msa1073350-mRNA-1 |
| chr7_2 | exon | 70825750 | 70826011 | 70825750 | ID=Msa1073350-mRNA-1:exon:16034;Parent=Msa1073350-mRNA-1 |
| chr7_2 | CDS | 70823952 | 70824011 | 70823952 | ID=Msa1073350-mRNA-1:cds;Parent=Msa1073350-mRNA-1 |
| chr7_2 | CDS | 70824474 | 70824571 | 70824474 | ID=Msa1073350-mRNA-1:cds;Parent=Msa1073350-mRNA-1 |
| chr7_2 | CDS | 70825442 | 70825672 | 70825442 | ID=Msa1073350-mRNA-1:cds;Parent=Msa1073350-mRNA-1 |
| chr7_2 | CDS | 70825750 | 70826011 | 70825750 | ID=Msa1073350-mRNA-1:cds;Parent=Msa1073350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
